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ABCC3

receptor: PXRTier 1

Drug substrates

methotrexate; morphine-glucuronide; bile acids

refs: 25275310, 40301309

CAMIP causal chains

PXR

Blunted receptor-mediated induction of ABCC3 expression, weakening basolateral transport capacity for organic anions and drug conjugates such as methotrexate and morphine-glucuronide.

Affected substrate drugs (PharmGKB): cisplatin; morphine; cyclophosphamide; doxorubicin; methotrexate; vincristine

Scored variants near ABCC3

chr17:50,534,880..50,792,253, gene body plus 100 kb. Showing the strongest 200 by effect size.

VariantPosition PXR FXR AhR AF
chr17_50543044_C_Gchr17:5054304484,80019,07252,480—   
chr17_50542998_A_Tchr17:5054299853,18411,29654,272—   
chr17_50543035_A_Tchr17:5054303548,70411,90429,952—   
chr17_50543051_T_Gchr17:5054305136,73611,42425,856—   
chr17_50543205_C_Gchr17:5054320532,5769,79228,288—   
chr17_50543044_C_Tchr17:5054304430,9766,52822,0163.9e-5
chr17_50543067_T_Achr17:50543067-29,056-8,096-28,800—   
chr17_50543067_T_Gchr17:50543067-28,992-7,808-27,392—   
chr17_50543051_T_Cchr17:5054305123,8088,16018,176—   
chr17_50543067_T_Cchr17:50543067-23,680-6,912-22,144—   
chr17_50543060_C_Tchr17:5054306023,0406,84816,896—   
chr17_50543195_T_Cchr17:50543195-22,464-5,632-22,272—   
chr17_50543064_T_Gchr17:50543064-21,824-4,416-18,816—   
chr17_50543068_G_Cchr17:50543068-21,824-4,928-21,248—   
chr17_50543035_A_Cchr17:5054303521,4406,27212,544—   
chr17_50543064_T_Achr17:50543064-21,312-4,288-19,584—   
chr17_50543196_C_Gchr17:5054319621,1205,56816,896—   
chr17_50543031_T_Cchr17:50543031-20,480-5,056-19,200—   
chr17_50543060_C_Achr17:50543060-19,840-4,608-22,016—   
chr17_50543054_A_Gchr17:5054305419,5846,11217,664—   
chr17_50543063_A_Cchr17:50543063-19,072-4,336-17,408—   
chr17_50543052_T_Gchr17:5054305218,6245,47215,8725.9e-5
chr17_50543060_C_Gchr17:50543060-18,560-4,128-19,200—   
chr17_50543022_G_Cchr17:5054302217,8563,48813,056—   
chr17_50543063_A_Gchr17:50543063-17,728-4,064-16,256—   
chr17_50543064_T_Cchr17:50543064-17,536-3,872-15,616—   
chr17_50543047_A_Gchr17:5054304717,1524,57615,872—   
chr17_50543065_A_Tchr17:50543065-16,576-3,808-18,432—   
chr17_50543055_T_Gchr17:5054305516,5125,95214,848—   
chr17_50543000_A_Gchr17:5054300015,8087,36014,336—   
chr17_50543057_C_Achr17:5054305715,8084,51214,592—   
chr17_50543070_C_Gchr17:50543070-15,680-3,456-17,280—   
chr17_50543053_A_Cchr17:5054305315,6805,28015,360—   
chr17_50543065_A_Cchr17:50543065-15,552-3,584-16,768—   
chr17_50543052_T_Achr17:5054305215,2964,28811,008—   
chr17_50542998_A_Cchr17:5054299815,2323,39220,992—   
chr17_50543041_G_Tchr17:5054304115,1683,80812,416—   
chr17_50543069_A_Cchr17:50543069-14,528-3,584-17,152—   
chr17_50543035_A_Gchr17:5054303514,0803,1368,7046.6e-6
chr17_50543065_A_Gchr17:50543065-13,888-3,456-14,208—   
chr17_50543047_A_Cchr17:50543047-13,760-3,904-10,112—   
chr17_50543070_C_Achr17:50543070-13,696-3,232-15,488—   
chr17_50543062_A_Tchr17:50543062-13,568-2,880-13,184—   
chr17_50543232_T_Gchr17:5054323213,5044,38412,160—   
chr17_50543069_A_Tchr17:50543069-13,248-3,456-15,744—   
chr17_50543044_C_Achr17:5054304413,2483,26410,496—   
chr17_50543038_C_Gchr17:50543038-12,672-3,104-13,952—   
chr17_50543063_A_Tchr17:50543063-12,544-2,496-12,672—   
chr17_50543055_T_Achr17:5054305512,5444,38411,008—   
chr17_50543062_A_Cchr17:50543062-12,544-2,592-11,648—   
chr17_50543062_A_Gchr17:50543062-12,480-2,624-11,776—   
chr17_50543061_A_Gchr17:50543061-12,352-3,296-14,208—   
chr17_50543045_C_Achr17:5054304512,2882,75211,520—   
chr17_50542999_G_Tchr17:5054299912,2243,5848,960—   
chr17_50543066_T_Cchr17:50543066-12,032-2,752-13,440—   
chr17_50543066_T_Gchr17:50543066-11,968-2,656-13,056—   
chr17_50543066_T_Achr17:50543066-11,904-2,496-13,568—   
chr17_50543050_T_Gchr17:5054305011,8404,51211,264—   
chr17_50543040_G_Tchr17:5054304011,7762,81610,240—   
chr17_50543028_A_Cchr17:5054302811,7122,91213,056—   
chr17_50543215_C_Achr17:5054321511,5202,81611,776—   
chr17_50543045_C_Gchr17:5054304511,3922,59212,544—   
chr17_50543011_C_Achr17:50543011-11,264-2,976-8,9606.6e-6
chr17_50543214_A_Gchr17:5054321411,1364,64050,688—   
chr17_50542996_C_Gchr17:5054299611,1363,00810,752—   
chr17_50543015_C_Gchr17:5054301510,7524,8327,680—   
chr17_50543055_T_Cchr17:5054305510,7523,87210,240—   
chr17_50543053_A_Gchr17:5054305310,6883,48812,288—   
chr17_50542966_A_Cchr17:5054296610,6883,7129,216—   
chr17_50543206_T_Gchr17:5054320610,6243,07210,368—   
chr17_50542995_T_Gchr17:5054299510,5602,78412,544—   
chr17_50543013_G_Tchr17:50543013-10,304-3,296-11,264—   
chr17_50543071_T_Gchr17:50543071-10,240-3,104-8,960—   
chr17_50543030_A_Tchr17:5054303010,1123,2328,448—   
chr17_50543205_C_Achr17:5054320510,0483,42410,496—   
chr17_50543223_C_Gchr17:505432239,9842,5920—   
chr17_50543237_C_Tchr17:505432379,8564,7047,680—   
chr17_50543243_T_Cchr17:50543243-9,728-2,976-8,1921.3e-5
chr17_50542972_C_Achr17:50542972-9,664-2,432-9,984—   
chr17_50543188_C_Achr17:50543188-9,536-2,688-10,624—   
chr17_50542999_G_Achr17:505429999,4723,7129,4722.0e-5
chr17_50542934_G_Achr17:505429349,4083,23215,104—   
chr17_50543014_G_Cchr17:50543014-9,344-2,336-7,1686.6e-6
chr17_50543040_G_Achr17:50543040-9,344-1,760-8,192—   
chr17_50543243_T_Achr17:50543243-9,216-2,752-4,352—   
chr17_50543192_A_Gchr17:50543192-9,152-2,304-10,368—   
chr17_50543001_G_Cchr17:50543001-9,088-2,656-8,832—   
chr17_50542997_A_Tchr17:505429978,9603,0409,216—   
chr17_50543054_A_Tchr17:505430548,8322,2087,936—   
chr17_50543053_A_Tchr17:505430538,7042,6569,984—   
chr17_50542983_C_Gchr17:50542983-8,704-448-9,216—   
chr17_50543211_T_Cchr17:50543211-8,704-2,976-8,320—   
chr17_50543014_G_Tchr17:50543014-8,640-2,336-8,960—   
chr17_50542984_G_Cchr17:505429848,4482,4009,728—   
chr17_50542940_A_Cchr17:505429408,4481,8565,504—   
chr17_50543043_C_Gchr17:505430438,4482,2406,656—   
chr17_50543003_C_Achr17:50543003-8,384-2,368-6,400—   
chr17_50543203_T_Achr17:505432038,3844,2245,504—   
chr17_50543204_C_Gchr17:505432048,2562,5289,344—   
chr17_50542995_T_Achr17:505429958,1282,3046,656—   
chr17_50542956_G_Cchr17:50542956-8,000-1,984-7,936—   
chr17_50543061_A_Tchr17:50543061-7,936-2,432-9,984—   
chr17_50543223_C_Tchr17:505432237,8721,2489,8562.0e-5
chr17_50543215_C_Gchr17:505432157,8721,3127,936—   
chr17_50543195_T_Achr17:50543195-7,744-1,728-6,144—   
chr17_50543030_A_Gchr17:50543030-7,680-1,920-6,016—   
chr17_50542962_A_Gchr17:505429627,6163,8088,960—   
chr17_50543059_G_Cchr17:50543059-7,616-2,176-8,448—   
chr17_50542997_A_Cchr17:505429977,5522,2089,472—   
chr17_50543025_T_Gchr17:505430257,5521,3769,216—   
chr17_50543068_G_Tchr17:505430687,5522,5926,656—   
chr17_50543042_G_Achr17:50543042-7,488-1,600-8,320—   
chr17_50543203_T_Cchr17:50543203-7,296-1,216-7,936—   
chr17_50542987_G_Tchr17:50542987-7,296-992-4,096—   
chr17_50543028_A_Gchr17:50543028-7,296-2,048-6,528—   
chr17_50543029_G_Achr17:505430297,2962,4966,400—   
chr17_50543052_T_Cchr17:505430527,2962,1127,168—   
chr17_50542987_G_Achr17:50542987-7,232-800-1,536—   
chr17_50543004_A_Tchr17:50543004-7,168-2,016-6,656—   
chr17_50543033_C_Achr17:505430337,1682,5605,760—   
chr17_50543204_C_Achr17:505432047,1683,3286,016—   
chr17_50543021_G_Tchr17:505430217,1041,2164,608—   
chr17_50543036_G_Achr17:50543036-7,040-1,952-7,040—   
chr17_50543194_C_Gchr17:50543194-6,976-1,536-9,216—   
chr17_50543057_C_Gchr17:505430576,9762,1768,192—   
chr17_50543210_T_Cchr17:505432106,9761,8566,912—   
chr17_50543051_T_Achr17:505430516,9123,1045,120—   
chr17_50543211_T_Gchr17:505432116,9121,3123,328—   
chr17_50542983_C_Tchr17:50542983-6,848-1,632-7,1682.0e-5
chr17_50543011_C_Tchr17:505430116,7842,0166,400—   
chr17_50543243_T_Gchr17:50543243-6,720-2,720-4,992—   
chr17_50542939_G_Cchr17:505429396,6561,664512—   
chr17_50543001_G_Tchr17:50543001-6,656-2,048-6,656—   
chr17_50543020_A_Tchr17:505430206,6561,8565,888—   
chr17_50543202_C_Achr17:505432026,5921,98410,624—   
chr17_50543027_G_Achr17:50543027-6,592-1,952-7,296—   
chr17_50543061_A_Cchr17:50543061-6,592-2,144-6,912—   
chr17_50543196_C_Achr17:50543196-6,592-1,280-6,656—   
chr17_50542992_A_Tchr17:50542992-6,528-1,312-7,168—   
chr17_50543034_C_Achr17:50543034-6,464-1,632-8,448—   
chr17_50542988_C_Achr17:50542988-6,464-1,216-4,864—   
chr17_50542999_G_Cchr17:505429996,4642,1446,400—   
chr17_50543022_G_Tchr17:505430226,4641,0883,328—   
chr17_50543192_A_Tchr17:50543192-6,400-960-7,296—   
chr17_50543025_T_Achr17:505430256,4001,4727,0406.6e-6
chr17_50543189_A_Tchr17:505431896,4001,3126,528—   
chr17_50542996_C_Achr17:505429966,4002,1765,888—   
chr17_50543207_T_Gchr17:505432076,4001,9844,224—   
chr17_50543208_T_Achr17:50543208-6,336-1,312-6,912—   
chr17_50543016_T_Gchr17:505430166,3361,4726,656—   
chr17_50542983_C_Achr17:50542983-6,336-608-5,376—   
chr17_50543014_G_Achr17:50543014-6,336-1,472-5,632—   
chr17_50543071_T_Achr17:505430716,3362,4324,352—   
chr17_50543039_T_Achr17:505430396,2721,2485,120—   
chr17_50543069_A_Gchr17:50543069-6,208-1,888-8,192—   
chr17_50543203_T_Gchr17:505432036,1441,5365,2486.6e-6
chr17_50543023_C_Tchr17:505430236,0801,3762,5606.6e-6
chr17_50543042_G_Tchr17:50543042-6,016-1,440-7,808—   
chr17_50543220_T_Gchr17:50543220-5,952-2,208-13,440—   
chr17_50543239_G_Cchr17:50543239-5,952-2,048-6,272—   
chr17_50543013_G_Achr17:50543013-5,952-1,728-6,144—   
chr17_50543235_C_Achr17:50543235-5,824-1,440-6,7846.6e-6
chr17_50543058_A_Cchr17:505430585,6961,8247,168—   
chr17_50543220_T_Achr17:50543220-5,632-2,080-13,696—   
chr17_50543222_A_Cchr17:50543222-5,568-2,144-13,440—   
chr17_50542953_C_Gchr17:50542953-5,568-1,632-7,168—   
chr17_50543194_C_Achr17:50543194-5,440-992-6,784—   
chr17_50542997_A_Gchr17:505429975,3761,1206,912—   
chr17_50543000_A_Cchr17:505430005,2481,1846,144—   
chr17_50543068_G_Achr17:50543068-5,056480-8,448—   
chr17_50543189_A_Cchr17:505431895,0561,1206,016—   
chr17_50543231_G_Achr17:50543231-4,992-1,088-7,040—   
chr17_50543209_G_Achr17:50543209-4,992-1,280-6,528—   
chr17_50543222_A_Tchr17:50543222-4,800-2,240-12,416—   
chr17_50542998_A_Gchr17:505429984,4161,2167,424—   
chr17_50542981_G_Tchr17:505429814,4161,6966,144—   
chr17_50542986_G_Achr17:505429864,3521,5686,400—   
chr17_50543034_C_Tchr17:50543034-4,352-928-6,0166.6e-6
chr17_50543219_G_Achr17:50543219-4,096-1,440-11,008—   
chr17_50543219_G_Tchr17:50543219-3,840-1,248-11,264—   
chr17_50543202_C_Gchr17:50543202-3,712-640-6,528—   
chr17_50543285_C_Tchr17:505432853,6486407,040—   
chr17_50543026_G_Tchr17:50543026-3,584-976-6,912—   
chr17_50543189_A_Gchr17:505431893,5845766,272—   
chr17_50542980_G_Cchr17:505429803,2648646,912—   
chr17_50542989_T_Cchr17:505429893,2009606,144—   
chr17_50543193_G_Achr17:505431933,0086726,016—   
chr17_50542969_A_Cchr17:505429692,8801287,552—   
chr17_50543225_T_Gchr17:505432252,7521606,656—   
chr17_50543223_C_Achr17:50543223-2,112-1,024-8,832—   
chr17_50543222_A_Gchr17:50543222-2,048-1,888-10,112—   
chr17_50543215_C_Tchr17:50543215-2,048-1,056-6,912—   
chr17_50543221_C_Tchr17:50543221-1,728-992-8,320—   
chr17_50543217_G_Cchr17:50543217-1,344-672-7,552—   
chr17_50543238_T_Cchr17:50543238-1,216-1,34413,696—   
chr17_50543220_T_Cchr17:50543220-1,216-1,024-9,344—   
chr17_50543216_T_Gchr17:50543216-1,152-736-6,784—   
chr17_50549489_T_Gchr17:505494896401,6486,272—   
chr17_50543217_G_Achr17:50543217-512-416-7,2966.6e-6
chr17_50549487_G_Cchr17:5054948701,2486,272—   

Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.