ACTRT2

Scored variants near ACTRT2

chr1:2,921,466..3,122,903, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_2968731_A_C	chr1:2968731	-0.931	-0.885	-1.000	<0.001%
chr1_3066348_G_A	chr1:3066348	-1.000	-0.847	-1.000	0.0039%
chr1_3066352_G_A	chr1:3066352	-1.000	-0.824	-1.000	0.0013%
chr1_2968736_C_T	chr1:2968736	1.000	1.000	1.000	0.0013%
chr1_2968708_A_G	chr1:2968708	0.909	0.856	1.000	0.018%
chr1_2968730_T_C	chr1:2968730	-0.863	-0.810	-1.000	<0.001%
chr1_3066347_C_A	chr1:3066347	1.000	0.518	0.680	0.0013%
chr1_3012662_C_T	chr1:3012662	-0.549	-0.329	-1.000	<0.001%
chr1_2968759_G_T	chr1:2968759	-0.668	-0.709	-1.000	0.0066%
chr1_3066345_C_T	chr1:3066345	-0.920	-0.530	-1.000	0.0046%
chr1_2922212_C_G	chr1:2922212	-0.492	-0.521	-1.000	<0.001%
chr1_2968769_G_A	chr1:2968769	0.852	0.994	1.000	4.13%
chr1_2922208_G_A	chr1:2922208	-0.496	-0.367	-1.000	<0.001%
chr1_2922211_C_T	chr1:2922211	-0.478	-0.395	-1.000	0.0026%
chr1_2968759_G_A	chr1:2968759	-0.596	-0.650	-1.000	<0.001%
chr1_2968793_G_A	chr1:2968793	0.767	0.728	1.000	0.066%
chr1_3012607_C_T	chr1:3012607	0.454	0.335	1.000	0.047%
chr1_3066340_G_A	chr1:3066340	-0.685	-0.447	-0.810	<0.001%
chr1_3031440_C_G	chr1:3031440	0.310	0.214	1.000	0.0013%
chr1_2922235_G_C	chr1:2922235	-0.294	-0.308	-1.000	0.0013%
chr1_3012608_C_G	chr1:3012608	0.371	0.290	1.000	<0.001%
chr1_3012599_C_T	chr1:3012599	0.329	0.256	0.944	<0.001%
chr1_3012650_G_C	chr1:3012650	-0.312	-0.201	-0.892	<0.001%
chr1_3066584_G_A	chr1:3066584	0.539	0.553	0.588	0.0013%
chr1_2968704_G_A	chr1:2968704	-0.433	-0.519	-0.843	<0.001%
chr1_3069778_C_T	chr1:3069778	-0.515	-0.049	-0.289	<0.001%
chr1_3012613_C_T	chr1:3012613	0.295	0.248	0.807	<0.001%
chr1_2922237_G_A	chr1:2922237	0.259	0.230	0.778	<0.001%
chr1_3061140_A_T	chr1:3061140	-0.305	-0.246	-0.765	<0.001%
chr1_2922236_C_T	chr1:2922236	-0.232	-0.219	-0.752	0.011%
chr1_2968792_C_T	chr1:2968792	0.348	0.577	0.739	0.0020%
chr1_2968783_C_A	chr1:2968783	-0.305	-0.315	-0.725	<0.001%
chr1_3012605_C_T	chr1:3012605	0.306	0.186	0.725	<0.001%
chr1_2968740_T_C	chr1:2968740	-0.396	-0.302	-0.719	0.0020%
chr1_2968750_G_A	chr1:2968750	-0.416	-0.388	-0.634	<0.001%
chr1_2968749_T_G	chr1:2968749	0.412	0.431	0.627	0.0013%
chr1_2968768_C_T	chr1:2968768	-0.365	-0.407	-0.654	0.0046%
chr1_3061109_G_A	chr1:3061109	0.241	0.048	0.641	0.011%
chr1_2968804_G_T	chr1:2968804	-0.299	-0.284	-0.608	0.0020%
chr1_3031182_G_C	chr1:3031182	0.193	0.177	0.608	0.014%
chr1_2968605_G_A	chr1:2968605	-0.161	-0.224	-0.569	0.0013%
chr1_2968673_C_T	chr1:2968673	-0.188	-0.254	-0.562	0.0026%
chr1_2968834_A_C	chr1:2968834	-0.258	-0.313	-0.562	4.72%
chr1_2922205_C_T	chr1:2922205	0.270	0.168	0.549	0.0020%
chr1_2968794_A_G	chr1:2968794	0.289	0.278	0.549	<0.001%
chr1_3012609_C_A	chr1:3012609	0.209	0.130	0.549	0.0013%
chr1_3069647_A_C	chr1:3069647	-0.157	-0.111	-0.546	<0.001%
chr1_3012685_C_T	chr1:3012685	-0.253	-0.123	-0.546	0.018%
chr1_3061139_C_A	chr1:3061139	-0.210	-0.102	-0.542	<0.001%
chr1_2968599_C_T	chr1:2968599	-0.336	0.081	-0.405	<0.001%
chr1_3061159_A_T	chr1:3061159	0.336	0.157	0.346	0.0033%
chr1_2968682_C_T	chr1:2968682	0.334	0.342	0.523	0.0020%
chr1_2968644_G_A	chr1:2968644	0.270	0.412	0.516	<0.001%
chr1_3012614_C_T	chr1:3012614	0.215	0.139	0.516	0.067%
chr1_3012668_A_G	chr1:3012668	-0.225	-0.130	-0.510	<0.001%
chr1_2968763_G_A	chr1:2968763	0.227	0.439	0.490	0.0046%
chr1_3012623_C_A	chr1:3012623	0.197	0.135	0.487	<0.001%
chr1_2922215_G_A	chr1:2922215	0.170	0.128	0.484	0.0079%
chr1_2968824_G_A	chr1:2968824	-0.287	-0.233	-0.484	0.0039%
chr1_2968702_G_A	chr1:2968702	-0.303	-0.236	-0.431	0.016%
chr1_3012609_C_G	chr1:3012609	0.163	0.116	0.474	0.035%
chr1_2946230_C_A	chr1:2946230	0.037	0.149	0.471	<0.001%
chr1_2968790_G_A	chr1:2968790	-0.223	-0.192	-0.471	<0.001%
chr1_3012687_C_G	chr1:3012687	0.167	0.064	0.471	<0.001%
chr1_3031670_G_A	chr1:3031670	0.009	0.104	0.471	0.0026%
chr1_3066328_G_A	chr1:3066328	0.289	0.192	0.255	0.0033%
chr1_2922186_G_C	chr1:2922186	-0.166	-0.109	-0.451	0.0066%
chr1_2968755_G_C	chr1:2968755	0.258	0.248	0.451	0.049%
chr1_2922206_G_T	chr1:2922206	-0.209	-0.126	-0.444	0.011%
chr1_2968694_G_T	chr1:2968694	-0.252	-0.174	-0.444	<0.001%
chr1_3031238_A_G	chr1:3031238	-0.008	-0.053	-0.444	0.0013%
chr1_3066347_C_T	chr1:3066347	0.272	0.141	0.301	0.0033%
chr1_3012597_C_T	chr1:3012597	0.084	0.094	0.428	0.0059%
chr1_2968637_T_C	chr1:2968637	-0.163	-0.091	-0.412	<0.001%
chr1_2968835_G_C	chr1:2968835	-0.170	-0.220	-0.412	<0.001%
chr1_2968755_G_T	chr1:2968755	0.233	0.241	0.405	0.0013%
chr1_2968823_C_T	chr1:2968823	0.249	0.222	0.359	0.0013%
chr1_3012635_G_A	chr1:3012635	-0.143	-0.105	-0.395	0.237%
chr1_2946229_C_T	chr1:2946229	0.029	0.127	0.386	<0.001%
chr1_3012805_G_T	chr1:3012805	-0.004	-0.052	-0.386	<0.001%
chr1_2946231_C_T	chr1:2946231	0.025	0.125	0.382	<0.001%
chr1_2968824_G_T	chr1:2968824	-0.173	-0.153	-0.379	0.0013%
chr1_3066399_T_C	chr1:3066399	-0.239	-0.294	-0.170	0.0013%
chr1_3069618_G_A	chr1:3069618	0.163	0.109	0.371	0.0020%
chr1_3012602_C_T	chr1:3012602	0.114	0.115	0.366	0.0026%
chr1_2922234_C_T	chr1:2922234	0.076	0.102	0.359	0.0033%
chr1_3012695_C_G	chr1:3012695	-0.122	-0.058	-0.359	0.0020%
chr1_3069619_G_C	chr1:3069619	0.105	0.082	0.356	0.0099%
chr1_3066320_T_C	chr1:3066320	-0.223	-0.233	-0.314	<0.001%
chr1_2922185_C_A	chr1:2922185	0.167	0.104	0.346	0.0033%
chr1_2968714_G_A	chr1:2968714	0.219	0.212	0.333	0.0013%
chr1_2968719_G_A	chr1:2968719	0.123	0.310	0.346	0.011%
chr1_3031661_G_C	chr1:3031661	0.157	0.104	0.346	<0.001%
chr1_2968839_C_T	chr1:2968839	-0.130	-0.145	-0.340	0.0072%
chr1_3031207_T_A	chr1:3031207	0.111	-0.005	0.340	0.757%
chr1_2968727_T_C	chr1:2968727	0.202	0.150	0.163	<0.001%
chr1_2968840_G_C	chr1:2968840	-0.146	-0.195	-0.320	0.0020%
chr1_3012701_C_G	chr1:3012701	0.025	0.038	0.317	0.0033%
chr1_2922206_G_A	chr1:2922206	-0.176	-0.096	-0.314	<0.001%
chr1_2968716_A_G	chr1:2968716	0.120	0.273	0.314	0.0013%
chr1_2968612_C_T	chr1:2968612	0.196	0.046	0.098	<0.001%
chr1_3066313_C_T	chr1:3066313	-0.196	-0.112	-0.216	0.0026%
chr1_2922227_C_A	chr1:2922227	-0.093	-0.067	-0.307	<0.001%
chr1_2968783_C_T	chr1:2968783	-0.169	-0.133	-0.307	0.017%
chr1_2968816_C_T	chr1:2968816	-0.159	-0.117	-0.307	<0.001%
chr1_3031182_G_A	chr1:3031182	0.068	0.032	0.307	0.0033%
chr1_3012822_A_C	chr1:3012822	0.060	0.058	0.304	0.0013%
chr1_2968698_G_T	chr1:2968698	-0.151	-0.067	-0.301	<0.001%
chr1_3066396_G_A	chr1:3066396	0.173	0.585	0.242	<0.001%
chr1_3012767_A_G	chr1:3012767	0.112	0.038	0.297	<0.001%
chr1_3066424_C_T	chr1:3066424	-0.184	-0.144	-0.235	0.017%
chr1_2922255_G_C	chr1:2922255	0.136	0.067	0.288	0.012%
chr1_3069619_G_A	chr1:3069619	0.059	0.069	0.284	0.012%
chr1_2922146_C_A	chr1:2922146	0.116	0.089	0.281	<0.001%
chr1_2968855_G_A	chr1:2968855	-0.051	-0.051	-0.281	<0.001%
chr1_3031268_G_A	chr1:3031268	0.090	-0.046	0.281	<0.001%
chr1_3061065_C_T	chr1:3061065	-0.174	-0.166	-0.098	<0.001%
chr1_2922186_G_A	chr1:2922186	-0.134	-0.051	-0.275	0.0085%
chr1_2968674_G_A	chr1:2968674	-0.173	-0.118	-0.046	<0.001%
chr1_3031649_C_T	chr1:3031649	-0.033	-0.024	-0.275	<0.001%
chr1_2968845_C_A	chr1:2968845	0.171	0.075	0.242	<0.001%
chr1_3012625_C_T	chr1:3012625	0.100	0.065	0.271	<0.001%
chr1_3061061_C_T	chr1:3061061	0.165	0.067	0.137	0.0020%
chr1_3061189_C_A	chr1:3061189	-0.107	-0.070	-0.261	<0.001%
chr1_3066401_G_A	chr1:3066401	-0.165	-0.153	-0.111	<0.001%
chr1_2922198_G_A	chr1:2922198	-0.118	-0.085	-0.255	<0.001%
chr1_2946207_C_G	chr1:2946207	0.024	0.073	0.255	<0.001%
chr1_2968690_C_T	chr1:2968690	-0.134	-0.163	-0.255	0.0026%
chr1_2946239_C_T	chr1:2946239	0.015	0.077	0.252	0.0046%
chr1_3012603_C_A	chr1:3012603	0.080	0.072	0.252	0.0013%
chr1_2968840_G_A	chr1:2968840	-0.107	-0.123	-0.248	0.0092%
chr1_3066388_G_C	chr1:3066388	-0.157	-0.163	-0.118	0.0013%
chr1_3066468_T_G	chr1:3066468	-0.157	-0.153	-0.118	0.037%
chr1_3069759_G_C	chr1:3069759	0.155	0.008	0.167	<0.001%
chr1_3061059_G_A	chr1:3061059	-0.155	-0.161	0.026	0.0013%
chr1_2922154_C_T	chr1:2922154	0.120	0.064	0.242	<0.001%
chr1_3012686_C_T	chr1:3012686	0.103	0.039	0.242	0.0013%
chr1_3066305_C_T	chr1:3066305	0.151	0.112	0.170	<0.001%
chr1_3066467_G_A	chr1:3066467	-0.151	-0.045	-0.157	0.0033%
chr1_3012592_C_T	chr1:3012592	0.080	0.061	0.235	<0.001%
chr1_3012765_G_T	chr1:3012765	0.130	0.050	0.235	0.0013%
chr1_3069789_C_A	chr1:3069789	-0.148	-0.010	-0.074	<0.001%
chr1_2946213_C_T	chr1:2946213	0.010	0.073	0.232	<0.001%
chr1_2968640_T_C	chr1:2968640	0.076	0.024	0.229	<0.001%
chr1_3012831_C_T	chr1:3012831	0.035	0.054	0.225	0.0092%
chr1_3069610_G_C	chr1:3069610	0.090	0.041	0.222	0.025%
chr1_3061168_A_C	chr1:3061168	0.089	0.032	0.222	<0.001%
chr1_3066475_C_G	chr1:3066475	0.140	0.141	0.092	<0.001%
chr1_3066654_A_T	chr1:3066654	-0.072	-0.093	-0.222	<0.001%
chr1_2968811_T_A	chr1:2968811	-0.099	-0.091	-0.216	<0.001%
chr1_2968826_C_T	chr1:2968826	-0.101	-0.080	-0.216	<0.001%
chr1_3061199_G_A	chr1:3061199	-0.101	-0.061	-0.216	0.0020%
chr1_2968698_G_A	chr1:2968698	-0.132	-0.050	-0.209	0.0020%
chr1_2968842_G_T	chr1:2968842	-0.068	-0.134	-0.209	0.123%
chr1_2968603_C_T	chr1:2968603	-0.078	-0.118	-0.203	0.0059%
chr1_2968604_G_A	chr1:2968604	-0.052	-0.128	-0.203	0.0020%
chr1_2968618_C_G	chr1:2968618	-0.128	-0.053	0.065	<0.001%
chr1_3012684_G_A	chr1:3012684	-0.106	-0.039	-0.203	0.0053%
chr1_3012867_C_T	chr1:3012867	0.118	0.052	0.203	0.0013%
chr1_3031271_C_A	chr1:3031271	-0.030	-0.064	-0.203	0.0013%
chr1_3069791_C_A	chr1:3069791	-0.127	0.015	-0.052	<0.001%
chr1_3012674_T_C	chr1:3012674	-0.118	-0.051	-0.199	0.0020%
chr1_2946422_T_G	chr1:2946422	0.045	0.068	0.196	0.0013%
chr1_2968842_G_A	chr1:2968842	-0.029	-0.121	-0.196	<0.001%
chr1_3066540_A_T	chr1:3066540	0.124	0.147	0.105	0.0020%
chr1_3066613_C_A	chr1:3066613	0.124	0.153	0.170	<0.001%
chr1_3061066_C_T	chr1:3061066	-0.123	-0.128	-0.072	<0.001%
chr1_2968592_C_T	chr1:2968592	-0.122	-0.118	-0.183	0.324%
chr1_3012648_G_C	chr1:3012648	-0.075	-0.038	-0.193	<0.001%
chr1_3012868_C_T	chr1:3012868	0.091	0.051	0.193	<0.001%
chr1_3061030_G_T	chr1:3061030	0.122	0.121	-0.065	<0.001%
chr1_3066299_G_A	chr1:3066299	-0.122	-0.058	-0.150	2.14%
chr1_3012780_G_C	chr1:3012780	0.121	0.057	-0.046	<0.001%
chr1_2968718_C_G	chr1:2968718	-0.019	0.006	0.190	0.0085%
chr1_2968804_G_A	chr1:2968804	-0.085	-0.053	-0.190	0.0033%
chr1_2968861_C_G	chr1:2968861	-0.078	-0.073	-0.190	0.0033%
chr1_3012831_C_A	chr1:3012831	0.058	0.086	0.190	<0.001%
chr1_3066456_G_A	chr1:3066456	-0.120	-0.105	-0.157	<0.001%
chr1_3066610_T_C	chr1:3066610	-0.120	-0.089	-0.144	<0.001%
chr1_2968839_C_A	chr1:2968839	-0.031	-0.062	-0.183	0.0013%
chr1_3066285_C_T	chr1:3066285	-0.091	-0.077	-0.183	<0.001%
chr1_3069620_G_T	chr1:3069620	0.016	0.055	0.182	0.0013%
chr1_2968751_T_C	chr1:2968751	0.113	0.030	0.163	<0.001%
chr1_3012669_G_A	chr1:3012669	-0.080	-0.032	-0.180	<0.001%
chr1_3066324_C_T	chr1:3066324	0.113	-0.003	0.020	0.0039%
chr1_2922260_C_T	chr1:2922260	0.047	0.040	0.176	0.0013%
chr1_3012789_G_C	chr1:3012789	-0.111	-0.064	-0.075	0.0013%
chr1_3066299_G_C	chr1:3066299	-0.093	-0.054	-0.176	<0.001%
chr1_3066425_G_A	chr1:3066425	-0.111	-0.070	-0.137	0.0013%
chr1_3066482_G_A	chr1:3066482	0.111	0.038	-0.170	<0.001%
chr1_3066369_C_T	chr1:3066369	0.109	0.000	0.000	<0.001%
chr1_2968793_G_T	chr1:2968793	-0.107	0.022	-0.157	3.21%
chr1_2968829_G_T	chr1:2968829	-0.058	-0.062	-0.170	0.0013%
chr1_3066307_T_C	chr1:3066307	-0.107	0.000	-0.059	<0.001%
chr1_3069720_C_T	chr1:3069720	-0.106	-0.055	-0.105	<0.001%
chr1_3069792_C_A	chr1:3069792	0.048	0.019	0.167	<0.001%
chr1_3069609_G_C	chr1:3069609	0.034	0.042	0.165	<0.001%
chr1_3069714_C_T	chr1:3069714	-0.103	-0.050	-0.134	<0.001%
chr1_2922146_C_T	chr1:2922146	0.085	0.070	0.163	1.63%
chr1_2922308_C_A	chr1:2922308	-0.033	-0.022	-0.163	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.