Home / Gene
AGRN
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near AGRN
chr1:920,119..1,156,114, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_921261_C_G | chr1:921261 | 41,408 | 5,088 | 32,000 | — |
| chr1_921194_C_G | chr1:921194 | 30,688 | 4,688 | 22,656 | — |
| chr1_921196_T_G | chr1:921196 | 26,784 | 5,424 | 20,352 | — |
| chr1_921203_G_A | chr1:921203 | 26,752 | 3,840 | 17,920 | 1.5e-2 |
| chr1_921255_G_T | chr1:921255 | -26,656 | -4,896 | -36,096 | — |
| chr1_921255_G_A | chr1:921255 | -25,824 | -4,608 | -34,176 | — |
| chr1_921255_G_C | chr1:921255 | -25,408 | -4,672 | -32,512 | — |
| chr1_921250_C_G | chr1:921250 | -24,960 | -5,232 | -34,432 | — |
| chr1_921249_C_A | chr1:921249 | -24,288 | -4,528 | -31,872 | — |
| chr1_921194_C_A | chr1:921194 | 24,288 | 3,792 | 18,304 | — |
| chr1_921250_C_A | chr1:921250 | -24,256 | -4,992 | -33,792 | — |
| chr1_921259_G_T | chr1:921259 | -24,128 | -4,416 | -33,024 | — |
| chr1_921208_C_G | chr1:921208 | -23,904 | -4,688 | -34,688 | — |
| chr1_921249_C_G | chr1:921249 | -23,904 | -4,624 | -31,232 | — |
| chr1_921251_A_C | chr1:921251 | -23,424 | -4,672 | -28,160 | — |
| chr1_921250_C_T | chr1:921250 | -23,008 | -4,720 | -31,744 | — |
| chr1_921254_A_C | chr1:921254 | -23,008 | -4,688 | -31,744 | — |
| chr1_921254_A_T | chr1:921254 | -22,880 | -4,608 | -32,896 | — |
| chr1_921247_C_T | chr1:921247 | -22,592 | -3,424 | -30,720 | 6.6e-6 |
| chr1_921249_C_T | chr1:921249 | -22,496 | -4,384 | -28,672 | — |
| chr1_921235_G_C | chr1:921235 | -22,240 | -3,744 | -25,856 | — |
| chr1_921256_G_T | chr1:921256 | -21,952 | -4,176 | -33,280 | — |
| chr1_921258_G_A | chr1:921258 | -21,728 | -4,528 | -32,128 | — |
| chr1_921206_G_A | chr1:921206 | -21,632 | -3,904 | -25,344 | 2.6e-5 |
| chr1_921259_G_C | chr1:921259 | -21,536 | -4,032 | -27,392 | — |
| chr1_921207_G_T | chr1:921207 | -21,056 | -3,552 | -25,216 | — |
| chr1_921254_A_G | chr1:921254 | -20,960 | -4,160 | -28,928 | — |
| chr1_921260_A_T | chr1:921260 | -20,768 | -3,344 | -27,776 | — |
| chr1_921207_G_A | chr1:921207 | -20,736 | -3,376 | -24,832 | — |
| chr1_921258_G_C | chr1:921258 | -20,672 | -4,272 | -29,696 | — |
| chr1_921205_C_G | chr1:921205 | -20,672 | -4,144 | -27,264 | 1.3e-5 |
| chr1_921253_C_G | chr1:921253 | -20,480 | -4,416 | -29,696 | 6.6e-6 |
| chr1_921207_G_C | chr1:921207 | -20,448 | -3,488 | -23,552 | — |
| chr1_921256_G_C | chr1:921256 | -20,288 | -3,952 | -28,672 | — |
| chr1_921199_C_T | chr1:921199 | -20,224 | -3,712 | -27,264 | — |
| chr1_921248_C_G | chr1:921248 | 20,224 | 2,944 | 16,896 | — |
| chr1_921242_A_G | chr1:921242 | -20,096 | -3,712 | -28,928 | — |
| chr1_921199_C_G | chr1:921199 | -19,968 | -3,968 | -26,112 | — |
| chr1_921206_G_T | chr1:921206 | -19,840 | -3,968 | -24,704 | 3.3e-5 |
| chr1_921253_C_A | chr1:921253 | -19,648 | -4,176 | -28,800 | — |
| chr1_921248_C_A | chr1:921248 | 19,520 | 3,264 | 16,640 | — |
| chr1_921258_G_T | chr1:921258 | -18,752 | -3,312 | -26,624 | 3.3e-5 |
| chr1_921257_G_A | chr1:921257 | -18,592 | -3,520 | -25,856 | — |
| chr1_921259_G_A | chr1:921259 | -18,304 | -3,696 | -22,400 | — |
| chr1_921198_C_T | chr1:921198 | -18,176 | -3,728 | -26,112 | 3.3e-5 |
| chr1_921251_A_T | chr1:921251 | -17,856 | -3,264 | -19,840 | — |
| chr1_921201_C_A | chr1:921201 | -17,792 | -3,648 | -25,728 | — |
| chr1_921257_G_C | chr1:921257 | -17,760 | -3,536 | -24,576 | — |
| chr1_921200_T_A | chr1:921200 | -17,760 | -3,824 | -23,936 | — |
| chr1_921198_C_A | chr1:921198 | -17,536 | -3,424 | -24,832 | — |
| chr1_921203_G_C | chr1:921203 | -17,536 | -2,864 | -18,048 | — |
| chr1_921202_T_A | chr1:921202 | -17,504 | -3,472 | -23,808 | 6.7e-6 |
| chr1_921201_C_T | chr1:921201 | -17,440 | -3,312 | -23,040 | — |
| chr1_921232_C_G | chr1:921232 | 17,216 | 2,448 | 12,544 | — |
| chr1_921252_G_T | chr1:921252 | -17,120 | -3,952 | -25,856 | — |
| chr1_921202_T_G | chr1:921202 | -16,768 | -3,392 | -22,528 | — |
| chr1_921198_C_G | chr1:921198 | -16,672 | -3,360 | -23,424 | — |
| chr1_921219_C_G | chr1:921219 | -16,576 | -2,432 | -17,792 | — |
| chr1_921204_G_A | chr1:921204 | -16,384 | -3,456 | -22,272 | — |
| chr1_921263_C_A | chr1:921263 | -16,320 | -2,560 | -18,176 | — |
| chr1_921205_C_A | chr1:921205 | -16,224 | -3,392 | -21,120 | — |
| chr1_921257_G_T | chr1:921257 | -16,064 | -2,704 | -22,912 | — |
| chr1_921310_G_A | chr1:921310 | 16,064 | 2,144 | 14,080 | 3.9e-5 |
| chr1_921239_C_T | chr1:921239 | -16,032 | -2,608 | -18,432 | 6.7e-6 |
| chr1_921260_A_G | chr1:921260 | -15,808 | -2,976 | -20,992 | — |
| chr1_921239_C_G | chr1:921239 | -15,776 | -3,120 | -21,376 | 1.3e-5 |
| chr1_921200_T_G | chr1:921200 | -15,776 | -3,280 | -20,224 | — |
| chr1_921246_G_A | chr1:921246 | -15,680 | -2,512 | -21,632 | — |
| chr1_921212_A_G | chr1:921212 | -15,392 | -2,976 | -23,808 | — |
| chr1_921193_T_C | chr1:921193 | -15,360 | -2,720 | -22,528 | — |
| chr1_921252_G_A | chr1:921252 | -15,232 | -3,488 | -22,528 | — |
| chr1_921239_C_A | chr1:921239 | -15,200 | -2,624 | -16,896 | — |
| chr1_921236_C_G | chr1:921236 | -15,168 | -2,704 | -20,864 | — |
| chr1_921201_C_G | chr1:921201 | -15,072 | -3,008 | -20,480 | — |
| chr1_921199_C_A | chr1:921199 | -14,688 | -3,056 | -20,992 | — |
| chr1_921251_A_G | chr1:921251 | -14,336 | -2,752 | -15,616 | — |
| chr1_921263_C_G | chr1:921263 | -14,272 | -2,352 | -14,080 | — |
| chr1_921202_T_C | chr1:921202 | -14,048 | -2,992 | -18,560 | 6.7e-6 |
| chr1_921235_G_T | chr1:921235 | -13,888 | -2,288 | -14,208 | — |
| chr1_921197_C_A | chr1:921197 | -13,760 | -3,088 | -24,064 | 6.6e-6 |
| chr1_921305_C_T | chr1:921305 | 13,568 | 1,632 | 7,680 | 1.3e-5 |
| chr1_921197_C_T | chr1:921197 | -13,088 | -2,720 | -23,552 | — |
| chr1_921203_G_T | chr1:921203 | -12,960 | -2,240 | -15,104 | — |
| chr1_921294_C_G | chr1:921294 | 12,800 | 1,408 | 7,936 | — |
| chr1_921206_G_C | chr1:921206 | -12,736 | -2,496 | -13,696 | — |
| chr1_921246_G_C | chr1:921246 | 12,608 | 2,224 | 10,240 | — |
| chr1_921262_C_G | chr1:921262 | -12,416 | -2,192 | -13,312 | — |
| chr1_921298_C_G | chr1:921298 | -12,288 | -1,456 | -17,664 | — |
| chr1_921221_C_G | chr1:921221 | 12,192 | 2,656 | 12,032 | — |
| chr1_921267_G_C | chr1:921267 | -12,096 | -1,392 | -10,240 | — |
| chr1_921204_G_T | chr1:921204 | -12,000 | -2,416 | -16,000 | — |
| chr1_921208_C_A | chr1:921208 | -11,680 | -2,288 | -14,464 | — |
| chr1_921296_G_T | chr1:921296 | -11,648 | -1,136 | -9,728 | — |
| chr1_921262_C_A | chr1:921262 | -11,520 | -1,888 | -12,544 | — |
| chr1_921256_G_A | chr1:921256 | -11,456 | -2,352 | -13,312 | — |
| chr1_921296_G_A | chr1:921296 | -10,880 | -976 | -10,496 | — |
| chr1_921311_G_A | chr1:921311 | 10,880 | 1,392 | 9,216 | 6.6e-6 |
| chr1_921196_T_C | chr1:921196 | -10,848 | -2,464 | -16,896 | — |
| chr1_921298_C_T | chr1:921298 | -10,624 | -1,024 | -13,056 | 6.6e-6 |
| chr1_921275_A_T | chr1:921275 | -10,624 | -1,168 | -9,472 | — |
| chr1_921297_G_T | chr1:921297 | -10,560 | -992 | -9,472 | — |
| chr1_921298_C_A | chr1:921298 | -10,432 | -1,056 | -11,520 | — |
| chr1_921306_G_T | chr1:921306 | 10,432 | 1,424 | 7,168 | 6.6e-6 |
| chr1_921238_G_C | chr1:921238 | -10,400 | -1,680 | -10,240 | — |
| chr1_921294_C_T | chr1:921294 | 10,368 | 1,424 | 6,912 | — |
| chr1_921297_G_A | chr1:921297 | -10,304 | -976 | -8,960 | — |
| chr1_921295_A_T | chr1:921295 | -10,240 | -672 | -6,400 | — |
| chr1_921295_A_C | chr1:921295 | -10,048 | -768 | -5,120 | — |
| chr1_924021_C_A | chr1:924021 | 9,824 | 556 | 14,144 | 6.7e-6 |
| chr1_921264_G_A | chr1:921264 | 9,792 | 1,408 | 6,400 | 2.6e-5 |
| chr1_921197_C_G | chr1:921197 | -9,760 | -2,288 | -16,256 | — |
| chr1_921221_C_A | chr1:921221 | 9,760 | 2,352 | 9,728 | — |
| chr1_921296_G_C | chr1:921296 | -9,728 | -848 | -4,096 | — |
| chr1_921266_A_G | chr1:921266 | -9,696 | -1,232 | -13,184 | — |
| chr1_921233_C_A | chr1:921233 | -9,696 | -1,520 | -9,856 | — |
| chr1_921271_C_G | chr1:921271 | -9,664 | -1,008 | -6,912 | — |
| chr1_921209_G_T | chr1:921209 | -9,632 | -1,968 | -12,288 | 1.3e-5 |
| chr1_921314_G_A | chr1:921314 | -9,600 | -720 | -8,192 | 3.3e-5 |
| chr1_921292_G_C | chr1:921292 | -9,504 | -1,008 | -6,400 | — |
| chr1_930878_G_A | chr1:930878 | 9,472 | 3,128 | 11,712 | 9.9e-5 |
| chr1_921277_A_G | chr1:921277 | -9,408 | -864 | -11,264 | — |
| chr1_921297_G_C | chr1:921297 | -9,344 | -912 | -7,168 | — |
| chr1_921247_C_A | chr1:921247 | -9,184 | -1,280 | -8,448 | — |
| chr1_921208_C_T | chr1:921208 | -9,120 | -1,504 | -10,880 | 1.3e-5 |
| chr1_921302_G_T | chr1:921302 | -9,024 | -704 | -6,400 | — |
| chr1_921220_T_C | chr1:921220 | -8,928 | -1,760 | -13,056 | — |
| chr1_921172_G_C | chr1:921172 | -8,896 | -1,568 | -12,544 | — |
| chr1_921330_A_G | chr1:921330 | -8,896 | -752 | -11,264 | 6.6e-6 |
| chr1_921263_C_T | chr1:921263 | -8,832 | -1,264 | -6,656 | 6.6e-6 |
| chr1_921210_G_T | chr1:921210 | -8,704 | -2,000 | -11,264 | — |
| chr1_921237_G_C | chr1:921237 | -8,544 | -1,536 | -10,624 | — |
| chr1_921210_G_C | chr1:921210 | -8,160 | -1,808 | -10,368 | — |
| chr1_921245_G_T | chr1:921245 | 8,064 | 2,000 | 10,496 | — |
| chr1_921124_C_G | chr1:921124 | 8,064 | 1,664 | 5,120 | 6.6e-6 |
| chr1_921195_C_T | chr1:921195 | -8,000 | -1,536 | -10,240 | — |
| chr1_921267_G_T | chr1:921267 | -8,000 | -688 | -6,400 | — |
| chr1_921237_G_A | chr1:921237 | -7,904 | -1,328 | -10,624 | 3.3e-5 |
| chr1_924200_A_G | chr1:924200 | -7,904 | -248 | -5,440 | 6.7e-6 |
| chr1_921240_G_C | chr1:921240 | -7,872 | -1,376 | -7,424 | — |
| chr1_921196_T_A | chr1:921196 | -7,840 | -1,568 | -10,880 | 2.0e-5 |
| chr1_921261_C_T | chr1:921261 | -7,616 | -1,552 | -10,880 | — |
| chr1_921149_G_A | chr1:921149 | 7,584 | 544 | 11,776 | 6.6e-6 |
| chr1_921238_G_T | chr1:921238 | -7,488 | -1,408 | -9,216 | — |
| chr1_921240_G_T | chr1:921240 | -7,488 | -1,296 | -8,448 | — |
| chr1_921216_A_T | chr1:921216 | -7,456 | -1,344 | -8,960 | 6.6e-6 |
| chr1_921253_C_T | chr1:921253 | -7,136 | -1,440 | -8,960 | — |
| chr1_921213_G_T | chr1:921213 | -6,944 | -1,424 | -8,832 | — |
| chr1_921236_C_A | chr1:921236 | -6,784 | -944 | -8,448 | — |
| chr1_921234_A_C | chr1:921234 | -6,752 | -1,312 | -8,576 | — |
| chr1_921244_G_A | chr1:921244 | 6,464 | 976 | 8,704 | 6.6e-6 |
| chr1_921264_G_T | chr1:921264 | -6,272 | -816 | -7,936 | — |
| chr1_921204_G_C | chr1:921204 | -6,144 | -1,376 | -7,936 | — |
| chr1_921245_G_C | chr1:921245 | 6,016 | 1,152 | 9,216 | — |
| chr1_923891_G_C | chr1:923891 | 5,888 | 616 | 12,288 | 6.6e-6 |
| chr1_921215_C_T | chr1:921215 | -5,888 | -1,152 | -9,472 | — |
| chr1_924277_C_A | chr1:924277 | 5,856 | 676 | 12,800 | 6.7e-6 |
| chr1_921230_G_C | chr1:921230 | -5,792 | -656 | -7,936 | — |
| chr1_921286_G_C | chr1:921286 | 5,760 | 704 | 11,008 | — |
| chr1_924136_G_A | chr1:924136 | 5,728 | 444 | 9,984 | 6.7e-6 |
| chr1_921195_C_A | chr1:921195 | 3,776 | -48 | 10,496 | — |
| chr1_924270_C_A | chr1:924270 | 3,040 | 472 | 12,160 | 6.7e-6 |
| chr1_924130_G_A | chr1:924130 | 2,688 | 396 | 10,560 | 6.7e-6 |
| chr1_924134_G_A | chr1:924134 | 2,336 | 420 | 9,216 | 1.3e-5 |
| chr1_924988_C_G | chr1:924988 | 2,304 | 1,200 | 11,392 | 6.6e-6 |
| chr1_924981_C_G | chr1:924981 | 2,304 | 1,020 | 8,832 | 1.3e-5 |
| chr1_924987_C_T | chr1:924987 | 2,240 | 1,380 | 16,768 | 6.6e-6 |
| chr1_925056_T_C | chr1:925056 | -2,240 | -712 | -9,536 | 5.3e-5 |
| chr1_924002_C_A | chr1:924002 | 2,176 | 400 | 8,064 | 6.7e-6 |
| chr1_924117_G_A | chr1:924117 | 2,112 | 404 | 8,896 | 1.3e-5 |
| chr1_923876_C_T | chr1:923876 | 2,112 | 400 | 8,640 | 6.6e-6 |
| chr1_924288_C_T | chr1:924288 | 2,080 | 464 | 11,904 | 1.3e-5 |
| chr1_925001_C_T | chr1:925001 | 1,968 | 884 | 17,280 | 6.6e-6 |
| chr1_923875_C_T | chr1:923875 | 1,952 | 408 | 8,320 | 6.6e-6 |
| chr1_924306_C_T | chr1:924306 | 1,856 | 348 | 9,920 | 6.7e-6 |
| chr1_924074_G_A | chr1:924074 | 1,856 | 384 | 8,448 | 1.1e-4 |
| chr1_924958_C_A | chr1:924958 | 1,760 | 744 | 12,544 | 6.6e-6 |
| chr1_923866_C_T | chr1:923866 | 1,760 | 616 | 10,432 | 6.6e-6 |
| chr1_924323_T_G | chr1:924323 | -1,728 | -324 | -8,000 | 1.8e-4 |
| chr1_924329_C_T | chr1:924329 | 1,664 | 536 | 11,584 | 6.7e-6 |
| chr1_924279_C_T | chr1:924279 | 1,664 | 304 | 7,936 | 2.1e-4 |
| chr1_924305_G_A | chr1:924305 | 1,632 | 484 | 9,216 | 1.7e-1 |
| chr1_924110_C_A | chr1:924110 | 1,536 | 612 | 15,552 | 6.7e-6 |
| chr1_924275_G_A | chr1:924275 | 1,536 | 384 | 8,064 | 4.0e-5 |
| chr1_924299_G_A | chr1:924299 | 1,376 | 396 | 8,768 | 1.3e-5 |
| chr1_923982_G_T | chr1:923982 | 1,312 | 380 | 8,576 | 6.6e-6 |
| chr1_925003_T_G | chr1:925003 | -1,264 | -488 | -8,640 | 6.7e-6 |
| chr1_924072_C_A | chr1:924072 | 1,216 | 356 | 9,152 | 3.3e-5 |
| chr1_924094_G_A | chr1:924094 | 1,216 | 408 | 9,088 | 4.0e-5 |
| chr1_924314_C_T | chr1:924314 | 1,216 | 360 | 8,832 | 6.7e-6 |
| chr1_924124_G_A | chr1:924124 | 1,184 | 344 | 8,320 | 6.7e-6 |
| chr1_924983_C_T | chr1:924983 | 1,136 | 724 | 11,520 | 1.7e-3 |
| chr1_923865_C_A | chr1:923865 | 1,120 | 748 | 11,776 | 6.6e-6 |
| chr1_923863_A_C | chr1:923863 | -896 | -532 | -9,536 | 6.6e-6 |
| chr1_923860_G_A | chr1:923860 | 864 | 564 | 9,344 | 8.1e-3 |
| chr1_924034_G_A | chr1:924034 | 736 | 428 | 11,072 | 2.7e-5 |
| chr1_923828_A_C | chr1:923828 | -640 | -680 | -9,792 | 6.6e-6 |
| chr1_923864_G_A | chr1:923864 | 544 | 520 | 8,064 | 6.6e-6 |
| chr1_924320_G_A | chr1:924320 | 512 | 416 | 9,280 | 5.4e-5 |
| chr1_923858_G_A | chr1:923858 | 416 | 508 | 8,384 | 6.6e-6 |
| chr1_924320_G_T | chr1:924320 | 256 | 536 | 11,840 | 6.7e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.