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BCAS1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near BCAS1
chr20:53,843,537..54,170,765, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr20_54103547_T_G | chr20:54103547 | 1.000 | 1.000 | 0.885 | — |
| chr20_54103456_A_T | chr20:54103456 | 1.000 | 1.000 | 0.586 | — |
| chr20_54062934_G_C | chr20:54062934 | -1.000 | -0.448 | -0.763 | — |
| chr20_54062934_G_T | chr20:54062934 | -1.000 | -0.447 | -0.779 | — |
| chr20_54062934_G_A | chr20:54062934 | -1.000 | -0.425 | -0.742 | — |
| chr20_54062940_T_C | chr20:54062940 | -1.000 | -0.436 | -0.748 | — |
| chr20_54062940_T_A | chr20:54062940 | -1.000 | -0.427 | -0.773 | — |
| chr20_54062937_A_T | chr20:54062937 | -1.000 | -0.439 | -0.800 | — |
| chr20_54062939_C_T | chr20:54062939 | -1.000 | -0.410 | -0.766 | — |
| chr20_54062937_A_G | chr20:54062937 | -1.000 | -0.439 | -0.788 | — |
| chr20_54062939_C_G | chr20:54062939 | -1.000 | -0.410 | -0.766 | — |
| chr20_54062944_G_C | chr20:54062944 | -1.000 | -0.414 | -0.748 | — |
| chr20_54062936_C_G | chr20:54062936 | -1.000 | -0.423 | -0.840 | — |
| chr20_54062939_C_A | chr20:54062939 | -1.000 | -0.408 | -0.797 | — |
| chr20_54062940_T_G | chr20:54062940 | -1.000 | -0.405 | -0.705 | — |
| chr20_54062938_T_G | chr20:54062938 | -1.000 | -0.447 | -0.730 | — |
| chr20_54103528_T_G | chr20:54103528 | 1.000 | 0.501 | 0.519 | — |
| chr20_54062931_A_C | chr20:54062931 | -1.000 | -0.382 | -0.705 | — |
| chr20_54062944_G_A | chr20:54062944 | -1.000 | -0.405 | -0.757 | — |
| chr20_54062935_C_T | chr20:54062935 | -1.000 | -0.397 | -0.797 | — |
| chr20_54062938_T_A | chr20:54062938 | -1.000 | -0.448 | -0.736 | — |
| chr20_54062935_C_G | chr20:54062935 | -1.000 | -0.400 | -0.794 | — |
| chr20_54062936_C_A | chr20:54062936 | -1.000 | -0.413 | -0.831 | — |
| chr20_54062936_C_T | chr20:54062936 | -1.000 | -0.417 | -0.849 | — |
| chr20_54062930_T_A | chr20:54062930 | -1.000 | -0.342 | -0.574 | — |
| chr20_54062935_C_A | chr20:54062935 | -1.000 | -0.355 | -0.751 | — |
| chr20_54062933_T_A | chr20:54062933 | -1.000 | -0.394 | -0.708 | — |
| chr20_54062933_T_G | chr20:54062933 | -1.000 | -0.382 | -0.660 | — |
| chr20_54103485_C_G | chr20:54103485 | 1.000 | 0.909 | 0.464 | — |
| chr20_54062944_G_T | chr20:54062944 | -1.000 | -0.278 | -0.537 | — |
| chr20_54103531_G_A | chr20:54103531 | 1.000 | 0.753 | 0.574 | — |
| chr20_54062931_A_T | chr20:54062931 | -1.000 | -0.299 | -0.544 | — |
| chr20_54103506_G_T | chr20:54103506 | 1.000 | 0.938 | 0.421 | — |
| chr20_54062945_G_C | chr20:54062945 | -1.000 | -0.313 | -0.577 | — |
| chr20_54103530_G_T | chr20:54103530 | 1.000 | 0.743 | 0.629 | — |
| chr20_54103464_A_G | chr20:54103464 | 1.000 | 0.839 | 0.427 | — |
| chr20_54062941_A_C | chr20:54062941 | -1.000 | -0.296 | -0.519 | — |
| chr20_54062932_C_T | chr20:54062932 | -1.000 | -0.262 | -0.528 | — |
| chr20_54062941_A_T | chr20:54062941 | -1.000 | -0.281 | -0.516 | — |
| chr20_54062932_C_A | chr20:54062932 | -0.973 | -0.239 | -0.476 | — |
| chr20_54103465_T_G | chr20:54103465 | 0.966 | 0.616 | 0.446 | — |
| chr20_54062945_G_T | chr20:54062945 | -0.959 | -0.273 | -0.498 | — |
| chr20_54103528_T_A | chr20:54103528 | 0.896 | 0.483 | 0.537 | — |
| chr20_54103489_C_T | chr20:54103489 | 0.868 | 0.790 | 0.379 | — |
| chr20_54103493_T_C | chr20:54103493 | 0.863 | 0.886 | 0.421 | — |
| chr20_54103478_T_G | chr20:54103478 | 0.827 | 0.496 | 0.324 | — |
| chr20_54103491_G_C | chr20:54103491 | -0.827 | -0.551 | -0.336 | — |
| chr20_54103456_A_G | chr20:54103456 | 0.815 | 0.525 | 0.324 | — |
| chr20_54062930_T_C | chr20:54062930 | -0.795 | -0.119 | -0.208 | — |
| chr20_54103535_A_C | chr20:54103535 | -0.754 | -0.486 | -0.366 | — |
| chr20_54103480_G_C | chr20:54103480 | -0.747 | -0.506 | -0.366 | <0.001% |
| chr20_54103532_C_G | chr20:54103532 | -0.738 | -0.439 | -0.489 | — |
| chr20_54103491_G_T | chr20:54103491 | -0.713 | -0.522 | -0.354 | — |
| chr20_54103490_T_G | chr20:54103490 | -0.709 | -0.525 | -0.293 | — |
| chr20_54103517_T_G | chr20:54103517 | 0.708 | 0.545 | 0.336 | — |
| chr20_54103483_T_G | chr20:54103483 | -0.701 | -0.532 | -0.238 | — |
| chr20_54103532_C_A | chr20:54103532 | -0.697 | -0.462 | -0.452 | — |
| chr20_54103487_C_T | chr20:54103487 | -0.694 | -0.519 | -0.366 | — |
| chr20_54103529_T_G | chr20:54103529 | -0.691 | -0.486 | -0.464 | — |
| chr20_54103530_G_C | chr20:54103530 | -0.682 | -0.397 | -0.379 | — |
| chr20_54103515_A_G | chr20:54103515 | 0.674 | 0.571 | 0.470 | — |
| chr20_54103485_C_A | chr20:54103485 | 0.656 | 0.545 | 0.183 | — |
| chr20_54103529_T_A | chr20:54103529 | -0.656 | -0.504 | -0.470 | — |
| chr20_54103529_T_C | chr20:54103529 | -0.650 | -0.439 | -0.391 | — |
| chr20_54103573_T_A | chr20:54103573 | 0.650 | 0.029 | 0.134 | — |
| chr20_54103496_G_C | chr20:54103496 | 0.648 | 0.470 | 0.287 | <0.001% |
| chr20_54103499_T_G | chr20:54103499 | 0.648 | 0.579 | 0.324 | — |
| chr20_54103531_G_C | chr20:54103531 | -0.636 | -0.366 | -0.275 | — |
| chr20_54062942_T_G | chr20:54062942 | 0.627 | 0.070 | 0.318 | — |
| chr20_54103491_G_A | chr20:54103491 | -0.622 | -0.465 | -0.324 | — |
| chr20_54103510_C_G | chr20:54103510 | 0.619 | 0.501 | 0.226 | — |
| chr20_54062945_G_A | chr20:54062945 | -0.610 | -0.151 | -0.232 | — |
| chr20_54062957_A_C | chr20:54062957 | -0.610 | -0.132 | -0.177 | — |
| chr20_54103487_C_G | chr20:54103487 | -0.591 | -0.457 | -0.275 | — |
| chr20_54103490_T_A | chr20:54103490 | -0.591 | -0.452 | -0.281 | — |
| chr20_54103469_G_A | chr20:54103469 | 0.586 | 0.252 | 0.140 | — |
| chr20_54103484_G_C | chr20:54103484 | -0.586 | -0.429 | -0.287 | — |
| chr20_54103477_C_G | chr20:54103477 | -0.569 | -0.444 | -0.385 | — |
| chr20_54103483_T_C | chr20:54103483 | -0.568 | -0.416 | -0.208 | 0.0013% |
| chr20_54103512_T_G | chr20:54103512 | 0.564 | 0.255 | 0.366 | — |
| chr20_54103539_C_G | chr20:54103539 | 0.561 | 0.348 | 0.195 | — |
| chr20_54103542_T_G | chr20:54103542 | 0.554 | 0.397 | 0.360 | — |
| chr20_54103494_C_G | chr20:54103494 | -0.550 | -0.364 | -0.293 | — |
| chr20_54103534_C_A | chr20:54103534 | -0.550 | -0.275 | -0.244 | — |
| chr20_54062946_C_G | chr20:54062946 | -0.542 | -0.130 | -0.223 | — |
| chr20_54103488_T_C | chr20:54103488 | -0.540 | -0.366 | -0.159 | — |
| chr20_54103522_T_C | chr20:54103522 | 0.540 | 0.164 | 0.122 | <0.001% |
| chr20_54103488_T_A | chr20:54103488 | -0.533 | -0.405 | -0.256 | — |
| chr20_54103480_G_T | chr20:54103480 | -0.523 | -0.384 | -0.311 | — |
| chr20_54103467_C_G | chr20:54103467 | -0.518 | -0.403 | -0.238 | — |
| chr20_54062927_G_C | chr20:54062927 | 0.513 | 0.055 | 0.220 | — |
| chr20_54103530_G_A | chr20:54103530 | -0.513 | -0.345 | -0.348 | — |
| chr20_54103533_G_C | chr20:54103533 | -0.513 | -0.361 | -0.360 | — |
| chr20_54103567_T_C | chr20:54103567 | -0.513 | -0.088 | -0.098 | — |
| chr20_54103459_C_A | chr20:54103459 | -0.509 | -0.340 | -0.281 | — |
| chr20_54103482_C_G | chr20:54103482 | -0.501 | -0.371 | -0.287 | <0.001% |
| chr20_54103457_G_C | chr20:54103457 | -0.499 | -0.379 | -0.214 | — |
| chr20_54103534_C_G | chr20:54103534 | -0.497 | -0.330 | -0.263 | — |
| chr20_54062957_A_T | chr20:54062957 | -0.494 | -0.114 | -0.195 | — |
| chr20_54103479_G_C | chr20:54103479 | -0.494 | -0.348 | -0.232 | — |
| chr20_54103494_C_T | chr20:54103494 | -0.491 | -0.351 | -0.287 | — |
| chr20_54103471_T_G | chr20:54103471 | -0.489 | -0.361 | -0.269 | — |
| chr20_54103490_T_C | chr20:54103490 | -0.489 | -0.384 | -0.183 | <0.001% |
| chr20_54103519_C_A | chr20:54103519 | -0.489 | -0.387 | -0.299 | — |
| chr20_54103532_C_T | chr20:54103532 | -0.489 | -0.322 | -0.354 | — |
| chr20_54103457_G_A | chr20:54103457 | -0.485 | -0.392 | -0.263 | — |
| chr20_54103466_C_T | chr20:54103466 | -0.482 | -0.322 | -0.333 | — |
| chr20_54103511_T_C | chr20:54103511 | -0.482 | -0.343 | -0.214 | — |
| chr20_54103536_A_C | chr20:54103536 | -0.482 | -0.288 | -0.244 | — |
| chr20_54062987_T_A | chr20:54062987 | 0.474 | 0.208 | 0.287 | — |
| chr20_54103458_G_T | chr20:54103458 | -0.474 | -0.364 | -0.305 | 0.0020% |
| chr20_54103483_T_A | chr20:54103483 | -0.472 | -0.530 | -0.287 | — |
| chr20_54103489_C_G | chr20:54103489 | -0.472 | -0.356 | -0.128 | — |
| chr20_54103535_A_G | chr20:54103535 | -0.472 | -0.306 | -0.263 | — |
| chr20_54103459_C_T | chr20:54103459 | -0.470 | -0.325 | -0.263 | — |
| chr20_54103564_G_T | chr20:54103564 | 0.465 | 0.130 | 0.116 | — |
| chr20_54103467_C_A | chr20:54103467 | -0.463 | -0.325 | -0.256 | — |
| chr20_54103565_A_C | chr20:54103565 | -0.458 | -0.286 | -0.330 | — |
| chr20_54103476_G_T | chr20:54103476 | -0.453 | -0.317 | -0.330 | — |
| chr20_54103485_C_T | chr20:54103485 | 0.453 | 0.330 | 0.092 | — |
| chr20_54103458_G_A | chr20:54103458 | -0.450 | -0.332 | -0.293 | — |
| chr20_54103488_T_G | chr20:54103488 | -0.443 | -0.353 | -0.092 | — |
| chr20_54103481_A_T | chr20:54103481 | -0.441 | -0.294 | -0.238 | — |
| chr20_54103509_C_A | chr20:54103509 | 0.441 | 0.309 | 0.214 | — |
| chr20_54103484_G_A | chr20:54103484 | -0.438 | -0.338 | -0.275 | 0.0046% |
| chr20_54103546_T_G | chr20:54103546 | 0.438 | 0.309 | 0.238 | — |
| chr20_54103458_G_C | chr20:54103458 | -0.436 | -0.330 | -0.208 | — |
| chr20_54103479_G_T | chr20:54103479 | -0.436 | -0.288 | -0.263 | — |
| chr20_54103476_G_A | chr20:54103476 | -0.432 | -0.299 | -0.281 | — |
| chr20_54103479_G_A | chr20:54103479 | -0.422 | -0.322 | -0.275 | — |
| chr20_54103457_G_T | chr20:54103457 | -0.421 | -0.332 | -0.208 | — |
| chr20_54103465_T_A | chr20:54103465 | -0.419 | -0.314 | -0.195 | <0.001% |
| chr20_54103540_A_C | chr20:54103540 | 0.417 | 0.195 | 0.128 | — |
| chr20_54103459_C_G | chr20:54103459 | -0.414 | -0.242 | -0.220 | — |
| chr20_54103477_C_A | chr20:54103477 | -0.414 | -0.304 | -0.330 | — |
| chr20_54103500_T_G | chr20:54103500 | 0.410 | 0.281 | 0.275 | — |
| chr20_54103451_T_G | chr20:54103451 | 0.407 | 0.296 | 0.238 | — |
| chr20_54103452_C_T | chr20:54103452 | 0.407 | 0.229 | 0.165 | — |
| chr20_54103535_A_T | chr20:54103535 | -0.407 | -0.351 | -0.391 | — |
| chr20_54062942_T_C | chr20:54062942 | 0.403 | 0.055 | 0.168 | — |
| chr20_54103519_C_T | chr20:54103519 | -0.397 | -0.314 | -0.226 | — |
| chr20_54103536_A_T | chr20:54103536 | -0.397 | -0.231 | -0.263 | 0.024% |
| chr20_54103511_T_A | chr20:54103511 | -0.395 | -0.312 | -0.208 | — |
| chr20_54062962_C_G | chr20:54062962 | -0.393 | -0.099 | -0.150 | — |
| chr20_54103480_G_A | chr20:54103480 | -0.388 | -0.260 | -0.189 | — |
| chr20_54103467_C_T | chr20:54103467 | -0.386 | -0.283 | -0.275 | — |
| chr20_54103475_G_C | chr20:54103475 | -0.386 | -0.273 | -0.171 | — |
| chr20_54103566_A_G | chr20:54103566 | 0.386 | 0.221 | 0.232 | — |
| chr20_54103476_G_C | chr20:54103476 | -0.385 | -0.260 | -0.183 | — |
| chr20_54103462_A_C | chr20:54103462 | 0.383 | 0.260 | 0.226 | — |
| chr20_54062955_A_C | chr20:54062955 | -0.379 | -0.091 | -0.070 | — |
| chr20_54103537_T_A | chr20:54103537 | -0.379 | -0.236 | -0.256 | — |
| chr20_54103549_C_A | chr20:54103549 | -0.379 | -0.203 | -0.104 | — |
| chr20_54103504_G_T | chr20:54103504 | -0.376 | -0.286 | -0.244 | — |
| chr20_54103556_A_T | chr20:54103556 | 0.373 | 0.190 | 0.098 | — |
| chr20_54103505_T_A | chr20:54103505 | 0.369 | 0.247 | 0.085 | — |
| chr20_54103464_A_T | chr20:54103464 | 0.368 | 0.260 | 0.098 | — |
| chr20_54103516_G_T | chr20:54103516 | -0.366 | -0.294 | -0.153 | — |
| chr20_54062955_A_G | chr20:54062955 | 0.364 | 0.057 | 0.177 | — |
| chr20_54103515_A_C | chr20:54103515 | -0.359 | -0.309 | -0.073 | — |
| chr20_54103443_G_T | chr20:54103443 | -0.357 | -0.265 | -0.275 | — |
| chr20_54103507_T_C | chr20:54103507 | -0.352 | -0.177 | -0.067 | — |
| chr20_54103523_G_C | chr20:54103523 | -0.352 | -0.236 | -0.134 | — |
| chr20_54103493_T_A | chr20:54103493 | 0.350 | 0.309 | 0.189 | — |
| chr20_54103449_G_T | chr20:54103449 | 0.345 | 0.242 | 0.153 | — |
| chr20_54103538_T_C | chr20:54103538 | 0.345 | 0.151 | 0.250 | — |
| chr20_54103475_G_A | chr20:54103475 | -0.344 | -0.247 | -0.171 | — |
| chr20_54103481_A_C | chr20:54103481 | -0.344 | -0.255 | -0.128 | — |
| chr20_54103495_C_G | chr20:54103495 | -0.344 | -0.226 | -0.147 | — |
| chr20_54103510_C_T | chr20:54103510 | 0.340 | 0.281 | 0.098 | 0.0013% |
| chr20_54103589_C_G | chr20:54103589 | 0.338 | 0.164 | 0.336 | — |
| chr20_54062962_C_A | chr20:54062962 | -0.335 | -0.073 | -0.150 | — |
| chr20_54103460_T_A | chr20:54103460 | 0.335 | 0.231 | 0.122 | — |
| chr20_54062956_T_C | chr20:54062956 | -0.333 | -0.075 | -0.125 | — |
| chr20_54103443_G_C | chr20:54103443 | -0.332 | -0.257 | -0.195 | — |
| chr20_54103552_C_G | chr20:54103552 | -0.332 | -0.187 | -0.287 | — |
| chr20_54062957_A_G | chr20:54062957 | -0.330 | -0.081 | -0.089 | — |
| chr20_54103571_T_G | chr20:54103571 | 0.328 | 0.156 | 0.153 | — |
| chr20_54062925_A_G | chr20:54062925 | 0.326 | 0.021 | 0.043 | — |
| chr20_54103447_A_C | chr20:54103447 | 0.326 | 0.218 | 0.153 | — |
| chr20_54103496_G_T | chr20:54103496 | 0.325 | 0.255 | 0.092 | <0.001% |
| chr20_54062954_A_C | chr20:54062954 | -0.323 | -0.070 | -0.098 | — |
| chr20_54103448_A_C | chr20:54103448 | 0.323 | 0.244 | 0.275 | — |
| chr20_54103455_C_G | chr20:54103455 | -0.323 | -0.231 | -0.122 | — |
| chr20_54062924_A_G | chr20:54062924 | 0.321 | 0.029 | 0.058 | — |
| chr20_54103539_C_A | chr20:54103539 | -0.321 | -0.148 | -0.177 | — |
| chr20_54103548_G_T | chr20:54103548 | 0.321 | 0.255 | 0.128 | — |
| chr20_54103568_C_T | chr20:54103568 | 0.321 | 0.099 | 0.195 | — |
| chr20_54062926_A_C | chr20:54062926 | 0.320 | 0.018 | 0.082 | — |
| chr20_54103475_G_T | chr20:54103475 | -0.318 | -0.221 | -0.171 | — |
| chr20_54103498_G_T | chr20:54103498 | -0.318 | -0.179 | -0.140 | — |
| chr20_54103445_T_C | chr20:54103445 | 0.316 | 0.265 | 0.195 | — |
| chr20_54103445_T_G | chr20:54103445 | 0.316 | 0.283 | 0.263 | — |
| chr20_54103450_A_G | chr20:54103450 | 0.316 | 0.273 | 0.220 | — |
| chr20_54103473_T_A | chr20:54103473 | -0.315 | -0.203 | -0.183 | — |
| chr20_54103537_T_G | chr20:54103537 | -0.315 | -0.244 | -0.122 | — |
| chr20_54103573_T_G | chr20:54103573 | 0.315 | -0.013 | 0.165 | — |
| chr20_54062962_C_T | chr20:54062962 | -0.311 | -0.081 | -0.144 | 0.0013% |
| chr20_54103512_T_C | chr20:54103512 | 0.311 | 0.125 | 0.189 | — |
| chr20_54103576_T_A | chr20:54103576 | 0.311 | 0.086 | 0.165 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.