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BHLHA9
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near BHLHA9
chr17:1,170,443..1,371,815, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_1193470_C_A | chr17:1193470 | 61,552 | 18,736 | 47,360 | 3.9e-4 |
| chr17_1187380_G_A | chr17:1187380 | -41,136 | -3,280 | -13,568 | 5.9e-5 |
| chr17_1259284_G_C | chr17:1259284 | -36,032 | -3,968 | -47,488 | 6.6e-6 |
| chr17_1259242_C_T | chr17:1259242 | 19,328 | 1,792 | 16,768 | 6.6e-6 |
| chr17_1187276_T_A | chr17:1187276 | -18,560 | -2,432 | -15,232 | 3.0e-3 |
| chr17_1259243_C_T | chr17:1259243 | 17,824 | 1,264 | 12,928 | 5.3e-5 |
| chr17_1186963_G_A | chr17:1186963 | -16,192 | -5,184 | -18,816 | 4.6e-5 |
| chr17_1259350_A_G | chr17:1259350 | -15,296 | 512 | -1,536 | 1.3e-5 |
| chr17_1187275_G_C | chr17:1187275 | -14,784 | -2,144 | -14,720 | 6.6e-6 |
| chr17_1186969_C_T | chr17:1186969 | 14,272 | 2,512 | 13,696 | 6.6e-6 |
| chr17_1259246_C_T | chr17:1259246 | 12,944 | 1,440 | 10,368 | 5.9e-5 |
| chr17_1186993_T_C | chr17:1186993 | -12,928 | -3,328 | -10,112 | 2.0e-5 |
| chr17_1186965_C_A | chr17:1186965 | -12,736 | -3,744 | -13,824 | 6.6e-6 |
| chr17_1186996_C_G | chr17:1186996 | -12,544 | -2,064 | -9,728 | 3.3e-5 |
| chr17_1187275_G_T | chr17:1187275 | -12,032 | -768 | -6,656 | 5.9e-5 |
| chr17_1187339_G_A | chr17:1187339 | -11,968 | -1,136 | -11,136 | 3.0e-4 |
| chr17_1187087_G_C | chr17:1187087 | -10,816 | -2,944 | -12,544 | 6.6e-6 |
| chr17_1187429_G_C | chr17:1187429 | -10,448 | -160 | -4,736 | 1.3e-5 |
| chr17_1259676_G_T | chr17:1259676 | 10,048 | 2,688 | 13,056 | 6.6e-6 |
| chr17_1259211_C_A | chr17:1259211 | 10,000 | 832 | 8,704 | 1.3e-5 |
| chr17_1259730_C_T | chr17:1259730 | 9,632 | 3,264 | 17,664 | 1.3e-5 |
| chr17_1259230_T_C | chr17:1259230 | 9,504 | 576 | 9,472 | 6.6e-6 |
| chr17_1229448_G_C | chr17:1229448 | 9,472 | 232 | -320 | 1.3e-5 |
| chr17_1187088_C_T | chr17:1187088 | -9,344 | -2,176 | -10,496 | 6.6e-6 |
| chr17_1186998_G_A | chr17:1186998 | -9,216 | -2,256 | -7,040 | 2.6e-5 |
| chr17_1268230_C_T | chr17:1268230 | 8,960 | 416 | 2,560 | 6.6e-6 |
| chr17_1268231_C_T | chr17:1268231 | 8,096 | 560 | 1,152 | 6.6e-6 |
| chr17_1186932_G_C | chr17:1186932 | -8,000 | -2,112 | -512 | 1.3e-5 |
| chr17_1187032_C_T | chr17:1187032 | -7,936 | -1,872 | -9,216 | 1.5e-2 |
| chr17_1259227_G_C | chr17:1259227 | 7,792 | 608 | 8,192 | 6.6e-6 |
| chr17_1187011_G_A | chr17:1187011 | -7,744 | -1,280 | -7,296 | 2.6e-5 |
| chr17_1203316_G_A | chr17:1203316 | 7,600 | 1,588 | 13,120 | 1.3e-5 |
| chr17_1186936_G_C | chr17:1186936 | -7,488 | -2,528 | -4,096 | 1.2e-4 |
| chr17_1259212_C_T | chr17:1259212 | 7,488 | 528 | 6,528 | 1.3e-5 |
| chr17_1187466_G_C | chr17:1187466 | 7,424 | 208 | 3,072 | 6.6e-6 |
| chr17_1193360_C_T | chr17:1193360 | 7,264 | 1,968 | 8,192 | 5.9e-5 |
| chr17_1187226_A_G | chr17:1187226 | 7,232 | 864 | 7,424 | 2.6e-5 |
| chr17_1187147_C_T | chr17:1187147 | -7,040 | -1,632 | -8,192 | 4.6e-5 |
| chr17_1268230_C_G | chr17:1268230 | 6,976 | -40 | 640 | 6.6e-6 |
| chr17_1187264_G_A | chr17:1187264 | -6,912 | -960 | -6,144 | 5.3e-5 |
| chr17_1259203_C_A | chr17:1259203 | 6,848 | 192 | 3,968 | 1.3e-5 |
| chr17_1186913_G_T | chr17:1186913 | 6,656 | 1,760 | 6,144 | 6.6e-6 |
| chr17_1186902_T_C | chr17:1186902 | 6,592 | 1,712 | 7,424 | 6.6e-6 |
| chr17_1268253_T_C | chr17:1268253 | 6,464 | 872 | 6,912 | 6.6e-6 |
| chr17_1187070_C_A | chr17:1187070 | -6,336 | -3,072 | -7,168 | 6.6e-6 |
| chr17_1187370_G_A | chr17:1187370 | -6,208 | -1,344 | -1,920 | 1.3e-5 |
| chr17_1187270_G_T | chr17:1187270 | -6,144 | -864 | -6,144 | 2.0e-5 |
| chr17_1268225_G_A | chr17:1268225 | 6,144 | 1,408 | 3,840 | 3.9e-5 |
| chr17_1259218_A_G | chr17:1259218 | 5,952 | 336 | 4,864 | 2.0e-5 |
| chr17_1268245_C_T | chr17:1268245 | 5,888 | 1,664 | 4,224 | 6.6e-6 |
| chr17_1259294_T_C | chr17:1259294 | -5,872 | -672 | -8,192 | 6.6e-6 |
| chr17_1259336_T_C | chr17:1259336 | 5,792 | 320 | -768 | 1.3e-5 |
| chr17_1259412_G_A | chr17:1259412 | 5,760 | 2,144 | 9,728 | 5.4e-5 |
| chr17_1268048_A_T | chr17:1268048 | 5,760 | 1,480 | 9,088 | 6.6e-6 |
| chr17_1186926_C_T | chr17:1186926 | -5,760 | -1,632 | -3,072 | 5.3e-5 |
| chr17_1229768_G_A | chr17:1229768 | -5,632 | -672 | -14,016 | 6.6e-6 |
| chr17_1187254_C_T | chr17:1187254 | -5,632 | -608 | -6,400 | 6.6e-6 |
| chr17_1186979_G_A | chr17:1186979 | 5,568 | 736 | 3,328 | 1.3e-5 |
| chr17_1186887_G_T | chr17:1186887 | 5,504 | 1,088 | 3,840 | 6.6e-6 |
| chr17_1186930_C_T | chr17:1186930 | -5,504 | -1,312 | -1,792 | 6.6e-6 |
| chr17_1187254_C_A | chr17:1187254 | -5,376 | -224 | -6,912 | 7.2e-4 |
| chr17_1187338_C_T | chr17:1187338 | 5,376 | 96 | 3,072 | 1.3e-5 |
| chr17_1259362_A_T | chr17:1259362 | 5,376 | 128 | 1,280 | 6.6e-6 |
| chr17_1259395_C_G | chr17:1259395 | -5,312 | -1,040 | -11,776 | 2.7e-5 |
| chr17_1268229_C_G | chr17:1268229 | 5,312 | 296 | -512 | 1.3e-5 |
| chr17_1268228_G_A | chr17:1268228 | -5,280 | 208 | -3,584 | 2.0e-5 |
| chr17_1186929_C_G | chr17:1186929 | 5,184 | 1,552 | 10,624 | 6.6e-5 |
| chr17_1203314_G_A | chr17:1203314 | 5,152 | 876 | 9,024 | 2.6e-5 |
| chr17_1259386_C_T | chr17:1259386 | 5,120 | 32 | -9,728 | 1.3e-5 |
| chr17_1229489_C_T | chr17:1229489 | -5,120 | 480 | 5,824 | 6.6e-6 |
| chr17_1187017_C_G | chr17:1187017 | -4,992 | -592 | -3,200 | 6.6e-6 |
| chr17_1187102_G_A | chr17:1187102 | -4,992 | -1,184 | -4,608 | 6.6e-6 |
| chr17_1187428_C_G | chr17:1187428 | 4,944 | 368 | 2,560 | 1.3e-5 |
| chr17_1268269_G_C | chr17:1268269 | 4,928 | 1,176 | 9,088 | 1.3e-5 |
| chr17_1186909_C_T | chr17:1186909 | 4,864 | 976 | 5,632 | 1.3e-5 |
| chr17_1187007_G_A | chr17:1187007 | -4,736 | -1,264 | -4,864 | 3.3e-4 |
| chr17_1268247_G_A | chr17:1268247 | -4,704 | -1,568 | -7,296 | 6.6e-6 |
| chr17_1187429_G_T | chr17:1187429 | -4,704 | 0 | -4,864 | 6.6e-6 |
| chr17_1203496_A_G | chr17:1203496 | 4,640 | 436 | 7,008 | 9.0e-1 |
| chr17_1268239_C_G | chr17:1268239 | -4,512 | -560 | -4,864 | 6.6e-6 |
| chr17_1187087_G_T | chr17:1187087 | -4,480 | -1,504 | -6,144 | 8.5e-3 |
| chr17_1259641_A_G | chr17:1259641 | -4,288 | -672 | -6,144 | 1.3e-5 |
| chr17_1229671_C_G | chr17:1229671 | -4,256 | 248 | 6,016 | 6.6e-6 |
| chr17_1229766_C_A | chr17:1229766 | 4,224 | 1,132 | 17,664 | 6.6e-6 |
| chr17_1259350_A_C | chr17:1259350 | -4,224 | -448 | -6,144 | 6.6e-6 |
| chr17_1268265_G_T | chr17:1268265 | 4,032 | 408 | 5,888 | 2.0e-5 |
| chr17_1229669_C_T | chr17:1229669 | 3,968 | 544 | 7,360 | 5.3e-5 |
| chr17_1259299_C_T | chr17:1259299 | -3,824 | -560 | -5,248 | 6.6e-6 |
| chr17_1259415_G_A | chr17:1259415 | 3,776 | 2,464 | 13,056 | 6.7e-5 |
| chr17_1187410_G_T | chr17:1187410 | -3,728 | -672 | -4,992 | 6.6e-6 |
| chr17_1259640_G_A | chr17:1259640 | -3,680 | -1,248 | -7,808 | 6.6e-6 |
| chr17_1229930_C_G | chr17:1229930 | 3,584 | 1,112 | 5,760 | 6.6e-6 |
| chr17_1259404_G_C | chr17:1259404 | 3,520 | 1,792 | 11,136 | 6.6e-6 |
| chr17_1267979_G_A | chr17:1267979 | 3,488 | 704 | 6,912 | 6.6e-6 |
| chr17_1186911_A_G | chr17:1186911 | 3,456 | 1,456 | 5,888 | 1.3e-5 |
| chr17_1259410_G_C | chr17:1259410 | 3,392 | 2,400 | 12,928 | 6.6e-6 |
| chr17_1229872_G_A | chr17:1229872 | 3,296 | 720 | 8,320 | 6.6e-6 |
| chr17_1203509_G_A | chr17:1203509 | 3,264 | 608 | 10,672 | 3.7e-5 |
| chr17_1203343_G_A | chr17:1203343 | 3,248 | 306 | 6,048 | 1.3e-5 |
| chr17_1203485_G_A | chr17:1203485 | 3,184 | 844 | 9,200 | 2.1e-5 |
| chr17_1203485_G_C | chr17:1203485 | 3,024 | 652 | 11,024 | 2.1e-5 |
| chr17_1259670_C_G | chr17:1259670 | 2,944 | 1,120 | 5,632 | 6.6e-6 |
| chr17_1229704_T_C | chr17:1229704 | -2,848 | -996 | -13,312 | 1.3e-5 |
| chr17_1203334_G_A | chr17:1203334 | 2,848 | 426 | 5,040 | 7.0e-6 |
| chr17_1259436_C_T | chr17:1259436 | -2,688 | 128 | -9,216 | 2.2e-2 |
| chr17_1259406_G_C | chr17:1259406 | 2,688 | 2,144 | 7,936 | 6.6e-6 |
| chr17_1259681_C_T | chr17:1259681 | 2,688 | -352 | 6,528 | 1.3e-5 |
| chr17_1229662_C_T | chr17:1229662 | 2,688 | 488 | 5,440 | 6.6e-6 |
| chr17_1229697_G_A | chr17:1229697 | -2,688 | -616 | -4,864 | 2.0e-5 |
| chr17_1203485_G_T | chr17:1203485 | 2,672 | 836 | 9,328 | 1.1e-5 |
| chr17_1229930_C_T | chr17:1229930 | 2,656 | 952 | 6,208 | 6.6e-6 |
| chr17_1267991_T_C | chr17:1267991 | 2,496 | 512 | 7,424 | 6.6e-6 |
| chr17_1259287_G_A | chr17:1259287 | -2,432 | -256 | -6,400 | 3.3e-5 |
| chr17_1187293_C_G | chr17:1187293 | -2,400 | -64 | -5,632 | 2.0e-4 |
| chr17_1229402_G_A | chr17:1229402 | 2,400 | 476 | 5,376 | 4.2e-4 |
| chr17_1267996_C_G | chr17:1267996 | -2,368 | -1,344 | -6,400 | 6.6e-6 |
| chr17_1229530_T_C | chr17:1229530 | -2,368 | -340 | -5,504 | 2.6e-5 |
| chr17_1268013_T_C | chr17:1268013 | -2,304 | -1,376 | -7,936 | 5.9e-5 |
| chr17_1229377_C_A | chr17:1229377 | 2,304 | 424 | 6,464 | 6.9e-6 |
| chr17_1259735_C_T | chr17:1259735 | 2,304 | 32 | 6,400 | 6.6e-6 |
| chr17_1229355_G_A | chr17:1229355 | 2,272 | 388 | 7,168 | 6.7e-6 |
| chr17_1187272_T_C | chr17:1187272 | 2,240 | 576 | 5,760 | 2.0e-5 |
| chr17_1259719_C_T | chr17:1259719 | 2,176 | 1,248 | 6,656 | 6.6e-6 |
| chr17_1259320_G_A | chr17:1259320 | -2,048 | -576 | -10,240 | 6.6e-6 |
| chr17_1259416_G_A | chr17:1259416 | 2,048 | 1,376 | 6,912 | 6.6e-6 |
| chr17_1229345_C_T | chr17:1229345 | 2,048 | 520 | 6,720 | 2.7e-5 |
| chr17_1229932_C_A | chr17:1229932 | 1,952 | 904 | 5,568 | 6.6e-6 |
| chr17_1229590_T_G | chr17:1229590 | -1,936 | -884 | -12,448 | 6.6e-6 |
| chr17_1229748_C_T | chr17:1229748 | -1,920 | -56 | 10,368 | 6.6e-6 |
| chr17_1259410_G_A | chr17:1259410 | 1,920 | 2,368 | 10,368 | 6.6e-6 |
| chr17_1229620_G_A | chr17:1229620 | 1,856 | 492 | 6,144 | 2.0e-5 |
| chr17_1229799_C_T | chr17:1229799 | 1,856 | 368 | 5,568 | 6.6e-6 |
| chr17_1186973_G_A | chr17:1186973 | -1,856 | -1,376 | -5,376 | 6.6e-6 |
| chr17_1259417_C_G | chr17:1259417 | -1,792 | -1,968 | -8,192 | 6.7e-6 |
| chr17_1229414_C_T | chr17:1229414 | 1,760 | 376 | 7,424 | 1.3e-5 |
| chr17_1229954_C_T | chr17:1229954 | 1,760 | 432 | 6,304 | 6.6e-6 |
| chr17_1229600_A_G | chr17:1229600 | -1,728 | -696 | -7,232 | 6.7e-6 |
| chr17_1229322_G_A | chr17:1229322 | 1,728 | 476 | 6,592 | 6.7e-6 |
| chr17_1229669_C_A | chr17:1229669 | 1,696 | 392 | 5,376 | 2.6e-5 |
| chr17_1259759_C_T | chr17:1259759 | 1,664 | 208 | 7,424 | 6.6e-6 |
| chr17_1229590_T_C | chr17:1229590 | -1,504 | -644 | -10,240 | 6.6e-6 |
| chr17_1229568_C_T | chr17:1229568 | 1,504 | 464 | 7,520 | 1.3e-5 |
| chr17_1229351_C_A | chr17:1229351 | 1,472 | 292 | 6,336 | 6.8e-6 |
| chr17_1229360_G_A | chr17:1229360 | 1,472 | 488 | 6,272 | 6.9e-6 |
| chr17_1229389_G_A | chr17:1229389 | 1,408 | 460 | 5,120 | 4.9e-4 |
| chr17_1229560_C_T | chr17:1229560 | 1,408 | 456 | 5,120 | 6.6e-6 |
| chr17_1229328_G_A | chr17:1229328 | 1,408 | 400 | 4,992 | 6.8e-6 |
| chr17_1229408_C_T | chr17:1229408 | 1,376 | 416 | 5,504 | 6.8e-6 |
| chr17_1229493_T_C | chr17:1229493 | -1,376 | 232 | 4,864 | 1.3e-5 |
| chr17_1229749_T_A | chr17:1229749 | -1,344 | -744 | -10,784 | 6.6e-6 |
| chr17_1229305_G_A | chr17:1229305 | 1,280 | 372 | 5,504 | 6.6e-6 |
| chr17_1229596_C_A | chr17:1229596 | 1,280 | 440 | 5,120 | 6.6e-6 |
| chr17_1229591_C_A | chr17:1229591 | 1,248 | 744 | 10,400 | 2.0e-5 |
| chr17_1229430_G_A | chr17:1229430 | 1,216 | 436 | 6,080 | 1.5e-4 |
| chr17_1229956_C_T | chr17:1229956 | 1,216 | 324 | 5,216 | 5.3e-5 |
| chr17_1229318_C_T | chr17:1229318 | 1,216 | 312 | 4,992 | 3.3e-5 |
| chr17_1229668_C_T | chr17:1229668 | 1,216 | 172 | 4,864 | 6.6e-6 |
| chr17_1229593_G_A | chr17:1229593 | 1,184 | 456 | 7,104 | 2.0e-5 |
| chr17_1229294_C_T | chr17:1229294 | 1,184 | 432 | 6,144 | 6.6e-6 |
| chr17_1229936_C_T | chr17:1229936 | 1,152 | 708 | 7,552 | 6.6e-6 |
| chr17_1229572_G_T | chr17:1229572 | 1,152 | 536 | 5,696 | 2.6e-5 |
| chr17_1229579_C_T | chr17:1229579 | 1,120 | 424 | 5,024 | 6.6e-6 |
| chr17_1229592_G_A | chr17:1229592 | 1,056 | 576 | 8,256 | 2.6e-5 |
| chr17_1229405_G_T | chr17:1229405 | 1,024 | 468 | 5,376 | 6.9e-6 |
| chr17_1229604_C_T | chr17:1229604 | 960 | 488 | 6,592 | 6.6e-6 |
| chr17_1229943_C_A | chr17:1229943 | 928 | 304 | 5,248 | 6.6e-6 |
| chr17_1229787_G_T | chr17:1229787 | 896 | 24 | 6,016 | 6.6e-6 |
| chr17_1268017_G_A | chr17:1268017 | -864 | -384 | -6,144 | 4.2e-3 |
| chr17_1268039_G_A | chr17:1268039 | -864 | -528 | -6,016 | 2.6e-5 |
| chr17_1229308_G_A | chr17:1229308 | 832 | 428 | 6,144 | 2.6e-5 |
| chr17_1259470_G_A | chr17:1259470 | 832 | 544 | 4,864 | 6.6e-6 |
| chr17_1203501_G_A | chr17:1203501 | 736 | 548 | 7,488 | 1.8e-5 |
| chr17_1268076_T_G | chr17:1268076 | 736 | 392 | 5,504 | 3.3e-5 |
| chr17_1268107_T_C | chr17:1268107 | 736 | 736 | 5,248 | 6.6e-6 |
| chr17_1229943_C_T | chr17:1229943 | 704 | 244 | 5,888 | 1.3e-5 |
| chr17_1229321_C_T | chr17:1229321 | 704 | 496 | 5,696 | 2.0e-5 |
| chr17_1229211_C_T | chr17:1229211 | 672 | 260 | 4,864 | 1.3e-5 |
| chr17_1259324_C_G | chr17:1259324 | -640 | -416 | -5,888 | 2.6e-5 |
| chr17_1268071_A_T | chr17:1268071 | 640 | -104 | 5,376 | 1.4e-4 |
| chr17_1229617_C_A | chr17:1229617 | 640 | 452 | 5,248 | 6.6e-6 |
| chr17_1229358_G_T | chr17:1229358 | 640 | 416 | 5,120 | 4.9e-5 |
| chr17_1229647_G_A | chr17:1229647 | 576 | -24 | 6,720 | 1.4e-4 |
| chr17_1259389_T_C | chr17:1259389 | 576 | 448 | 6,144 | 2.2e-4 |
| chr17_1229603_G_A | chr17:1229603 | 512 | 432 | 6,912 | 1.1e-4 |
| chr17_1268052_T_C | chr17:1268052 | -512 | -440 | -5,760 | 6.6e-6 |
| chr17_1229573_C_T | chr17:1229573 | 512 | 276 | 4,960 | 1.3e-5 |
| chr17_1229701_C_G | chr17:1229701 | 480 | 240 | 8,896 | 1.3e-5 |
| chr17_1229911_C_T | chr17:1229911 | 480 | 376 | 5,184 | 6.6e-6 |
| chr17_1259671_G_T | chr17:1259671 | 448 | 64 | 4,992 | 3.9e-5 |
| chr17_1229239_A_G | chr17:1229239 | -448 | -352 | -4,928 | 6.6e-6 |
| chr17_1203480_G_A | chr17:1203480 | 400 | 88 | 7,920 | 9.3e-6 |
| chr17_1259586_G_A | chr17:1259586 | 320 | -128 | -5,120 | 6.6e-6 |
| chr17_1229603_G_T | chr17:1229603 | 256 | 316 | 4,992 | 1.3e-5 |
| chr17_1259724_G_T | chr17:1259724 | -224 | -400 | -8,320 | 6.6e-6 |
| chr17_1259523_G_T | chr17:1259523 | 128 | 16 | -5,376 | 6.6e-6 |
| chr17_1229630_T_C | chr17:1229630 | -112 | -332 | -5,440 | 6.6e-6 |
| chr17_1259721_G_A | chr17:1259721 | -96 | 0 | -8,320 | 2.0e-4 |
| chr17_1259722_G_C | chr17:1259722 | 64 | -112 | -8,448 | 1.3e-5 |
| chr17_1229877_G_A | chr17:1229877 | 64 | 304 | 5,184 | 6.6e-6 |
| chr17_1259446_C_T | chr17:1259446 | 64 | -64 | -4,864 | 1.3e-5 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.