CALML5

Scored variants near CALML5

chr10:5,398,696..5,599,570, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr10_5446539_C_G	chr10:5446539	-1.000	0.000	-1.000	<0.001%
chr10_5446539_C_T	chr10:5446539	-1.000	0.256	-1.000	<0.001%
chr10_5446568_C_T	chr10:5446568	-1.000	0.029	-1.000	<0.001%
chr10_5446537_C_G	chr10:5446537	-1.000	0.367	-0.569	0.0013%
chr10_5434197_C_G	chr10:5434197	-1.000	-0.585	-0.706	<0.001%
chr10_5446664_C_G	chr10:5446664	-0.948	-0.252	-0.425	<0.001%
chr10_5446586_G_A	chr10:5446586	0.833	0.796	0.392	<0.001%
chr10_5446584_T_C	chr10:5446584	0.831	-0.128	0.608	0.0026%
chr10_5466554_C_T	chr10:5466554	0.705	0.347	1.000	0.0013%
chr10_5466804_G_A	chr10:5466804	-0.631	-0.554	-1.000	<0.001%
chr10_5446565_C_T	chr10:5446565	-0.796	0.642	-0.340	<0.001%
chr10_5446581_G_C	chr10:5446581	0.668	-0.208	0.346	<0.001%
chr10_5412627_G_A	chr10:5412627	-0.653	-0.322	-0.353	<0.001%
chr10_5446488_C_G	chr10:5446488	0.639	0.278	0.281	0.0020%
chr10_5446633_A_C	chr10:5446633	-0.639	-0.450	-0.523	<0.001%
chr10_5466891_G_C	chr10:5466891	0.571	0.658	0.987	<0.001%
chr10_5446649_G_A	chr10:5446649	0.604	0.278	0.072	<0.001%
chr10_5466900_G_A	chr10:5466900	0.501	0.403	0.941	<0.001%
chr10_5446580_G_A	chr10:5446580	0.581	0.048	0.379	0.0039%
chr10_5466204_G_A	chr10:5466204	0.243	0.441	0.922	0.0013%
chr10_5466805_G_A	chr10:5466805	0.557	0.430	0.869	0.0013%
chr10_5466891_G_A	chr10:5466891	0.546	0.433	0.882	0.0046%
chr10_5412797_C_T	chr10:5412797	0.160	0.280	0.871	<0.001%
chr10_5412591_C_A	chr10:5412591	0.541	0.204	0.379	<0.001%
chr10_5412638_C_G	chr10:5412638	-0.536	-0.280	-0.422	<0.001%
chr10_5446596_G_C	chr10:5446596	-0.532	-0.016	-0.464	<0.001%
chr10_5446523_G_T	chr10:5446523	-0.530	-0.137	-0.562	<0.001%
chr10_5446544_A_C	chr10:5446544	-0.520	-0.447	-0.647	<0.001%
chr10_5466201_G_C	chr10:5466201	0.157	0.337	0.791	0.015%
chr10_5446567_G_A	chr10:5446567	-0.493	0.166	-0.275	<0.001%
chr10_5446628_C_T	chr10:5446628	-0.493	-0.038	-0.261	<0.001%
chr10_5412503_T_C	chr10:5412503	0.087	0.075	0.771	<0.001%
chr10_5466851_G_C	chr10:5466851	-0.486	-0.244	-0.229	<0.001%
chr10_5446704_G_A	chr10:5446704	-0.482	-0.096	-0.281	0.0013%
chr10_5412822_T_G	chr10:5412822	-0.184	-0.241	-0.763	0.0018%
chr10_5466201_G_A	chr10:5466201	0.147	0.326	0.758	0.209%
chr10_5466898_G_C	chr10:5466898	0.249	0.272	0.758	<0.001%
chr10_5446522_C_T	chr10:5446522	-0.466	-0.160	-0.425	<0.001%
chr10_5412819_A_G	chr10:5412819	-0.221	-0.171	-0.737	<0.001%
chr10_5446601_C_T	chr10:5446601	-0.464	-0.077	-0.163	0.0020%
chr10_5412948_G_A	chr10:5412948	0.154	0.123	0.734	<0.001%
chr10_5466203_G_A	chr10:5466203	0.092	0.288	0.732	0.0020%
chr10_5466599_C_G	chr10:5466599	0.254	0.227	0.725	0.0013%
chr10_5466898_G_A	chr10:5466898	0.299	0.300	0.712	0.0026%
chr10_5446647_G_T	chr10:5446647	0.445	0.157	-0.059	<0.001%
chr10_5446567_G_T	chr10:5446567	-0.429	0.182	-0.320	0.0013%
chr10_5466350_C_G	chr10:5466350	-0.208	-0.217	-0.680	<0.001%
chr10_5446585_C_G	chr10:5446585	-0.419	-0.332	-0.190	0.0020%
chr10_5466782_T_C	chr10:5466782	0.338	0.327	0.654	<0.001%
chr10_5446696_T_C	chr10:5446696	0.410	-0.019	0.000	<0.001%
chr10_5466892_G_C	chr10:5466892	0.230	0.275	0.634	0.0013%
chr10_5446585_C_A	chr10:5446585	0.394	0.038	0.222	<0.001%
chr10_5466858_G_A	chr10:5466858	-0.392	-0.158	-0.366	<0.001%
chr10_5466797_T_C	chr10:5466797	-0.380	-0.318	-0.569	<0.001%
chr10_5466551_G_T	chr10:5466551	0.237	0.113	0.601	0.014%
chr10_5412612_T_G	chr10:5412612	-0.376	-0.208	-0.330	<0.001%
chr10_5446466_T_A	chr10:5446466	-0.375	0.067	-0.490	0.230%
chr10_5467782_T_C	chr10:5467782	-0.039	-0.068	-0.532	—
chr10_5412616_A_G	chr10:5412616	-0.363	-0.162	-0.260	<0.001%
chr10_5446606_C_T	chr10:5446606	0.363	0.109	0.340	<0.001%
chr10_5446564_C_T	chr10:5446564	0.361	0.342	0.301	0.0020%
chr10_5466751_C_A	chr10:5466751	0.361	0.454	0.542	0.0020%
chr10_5412675_C_T	chr10:5412675	-0.146	0.104	0.565	0.0013%
chr10_5412920_G_C	chr10:5412920	0.044	0.097	0.549	0.0020%
chr10_5412824_A_G	chr10:5412824	-0.172	-0.152	-0.525	<0.001%
chr10_5466708_C_T	chr10:5466708	0.328	0.304	0.444	<0.001%
chr10_5467776_T_C	chr10:5467776	-0.028	-0.067	-0.462	—
chr10_5412677_C_G	chr10:5412677	-0.102	0.137	0.515	0.0013%
chr10_5412638_C_T	chr10:5412638	-0.324	-0.135	-0.038	0.018%
chr10_5466334_G_A	chr10:5466334	-0.127	-0.190	-0.510	0.0033%
chr10_5446514_T_G	chr10:5446514	0.313	0.297	0.503	<0.001%
chr10_5446608_C_G	chr10:5446608	-0.313	-0.230	-0.222	<0.001%
chr10_5412949_G_T	chr10:5412949	0.130	0.072	0.495	0.0021%
chr10_5466763_C_T	chr10:5466763	-0.311	-0.262	-0.346	<0.001%
chr10_5466194_G_A	chr10:5466194	0.009	0.072	0.477	0.014%
chr10_5466336_C_T	chr10:5466336	0.255	0.265	0.477	0.0020%
chr10_5466735_C_T	chr10:5466735	-0.231	-0.174	-0.477	<0.001%
chr10_5412605_T_C	chr10:5412605	0.299	0.008	0.180	<0.001%
chr10_5466829_C_A	chr10:5466829	0.298	0.241	0.386	0.0013%
chr10_5412912_G_A	chr10:5412912	0.061	0.076	0.471	0.026%
chr10_5446600_G_A	chr10:5446600	-0.297	-0.054	-0.301	<0.001%
chr10_5466658_C_T	chr10:5466658	-0.203	-0.086	-0.471	0.0026%
chr10_5446640_T_G	chr10:5446640	0.295	0.013	0.105	<0.001%
chr10_5466850_G_A	chr10:5466850	-0.294	-0.120	-0.131	0.030%
chr10_5446468_C_A	chr10:5446468	-0.285	-0.134	-0.124	<0.001%
chr10_5446651_C_T	chr10:5446651	0.285	0.291	0.078	<0.001%
chr10_5446817_C_T	chr10:5446817	-0.285	-0.061	-0.170	0.0013%
chr10_5466892_G_T	chr10:5466892	0.174	0.222	0.451	0.0020%
chr10_5446646_C_T	chr10:5446646	0.282	0.032	-0.033	0.0066%
chr10_5446612_A_G	chr10:5446612	-0.280	-0.083	-0.092	<0.001%
chr10_5466551_G_A	chr10:5466551	0.247	0.086	0.444	<0.001%
chr10_5412661_C_G	chr10:5412661	0.231	0.144	0.441	<0.001%
chr10_5412912_G_T	chr10:5412912	0.035	0.072	0.440	<0.001%
chr10_5413039_G_A	chr10:5413039	0.072	0.060	0.438	0.0015%
chr10_5446613_G_A	chr10:5446613	0.274	0.345	0.137	0.900%
chr10_5466815_G_A	chr10:5466815	0.273	0.011	0.379	0.0013%
chr10_5466341_G_A	chr10:5466341	-0.110	-0.147	-0.431	<0.001%
chr10_5466850_G_T	chr10:5466850	-0.272	-0.102	-0.098	0.0020%
chr10_5466341_G_T	chr10:5466341	-0.114	-0.145	-0.412	<0.001%
chr10_5412918_G_C	chr10:5412918	0.034	0.061	0.405	<0.001%
chr10_5446502_C_T	chr10:5446502	0.256	0.022	0.072	0.0020%
chr10_5466213_G_C	chr10:5466213	0.124	0.198	0.405	<0.001%
chr10_5413043_G_A	chr10:5413043	0.072	0.038	0.402	0.0015%
chr10_5466706_G_A	chr10:5466706	0.254	0.054	0.386	0.0033%
chr10_5466300_G_T	chr10:5466300	-0.133	-0.118	-0.399	0.0026%
chr10_5466287_G_A	chr10:5466287	0.245	-0.002	0.131	0.0020%
chr10_5412626_G_C	chr10:5412626	-0.241	-0.138	-0.131	<0.001%
chr10_5446404_G_A	chr10:5446404	-0.241	-0.147	-0.033	<0.001%
chr10_5446743_G_A	chr10:5446743	0.241	0.150	0.026	<0.001%
chr10_5446708_C_T	chr10:5446708	-0.239	-0.045	-0.183	0.0013%
chr10_5446662_G_A	chr10:5446662	0.235	0.118	0.020	0.021%
chr10_5466828_C_T	chr10:5466828	-0.180	-0.149	-0.373	<0.001%
chr10_5446552_G_A	chr10:5446552	0.231	0.131	0.203	<0.001%
chr10_5466768_C_T	chr10:5466768	-0.231	-0.181	-0.275	<0.001%
chr10_5466893_G_A	chr10:5466893	0.108	0.149	0.359	0.0026%
chr10_5412643_C_T	chr10:5412643	0.226	0.140	0.333	<0.001%
chr10_5412950_G_A	chr10:5412950	0.081	0.055	0.353	0.0021%
chr10_5446694_T_C	chr10:5446694	-0.223	-0.016	-0.118	<0.001%
chr10_5466563_G_A	chr10:5466563	0.223	0.335	0.275	0.0092%
chr10_5466602_A_C	chr10:5466602	-0.089	-0.067	-0.353	0.0020%
chr10_5466641_G_A	chr10:5466641	-0.223	-0.166	-0.288	0.0020%
chr10_5412572_G_C	chr10:5412572	0.148	0.067	0.346	0.056%
chr10_5446507_A_G	chr10:5446507	0.219	0.089	0.157	0.139%
chr10_5466850_G_C	chr10:5466850	-0.064	0.118	0.346	0.012%
chr10_5467016_G_A	chr10:5467016	0.096	0.134	0.346	0.0033%
chr10_5446642_G_A	chr10:5446642	0.216	-0.109	0.131	<0.001%
chr10_5413042_G_C	chr10:5413042	0.047	0.041	0.342	<0.001%
chr10_5412916_G_T	chr10:5412916	0.040	0.048	0.340	<0.001%
chr10_5466807_G_A	chr10:5466807	-0.148	-0.083	-0.340	0.020%
chr10_5466848_G_A	chr10:5466848	-0.213	-0.134	-0.314	<0.001%
chr10_5446420_T_A	chr10:5446420	0.212	0.058	0.301	<0.001%
chr10_5412927_T_G	chr10:5412927	-0.086	-0.068	-0.335	0.0016%
chr10_5412613_G_A	chr10:5412613	-0.210	-0.121	-0.114	0.0020%
chr10_5466327_T_C	chr10:5466327	0.154	0.192	0.333	0.0046%
chr10_5466817_T_A	chr10:5466817	0.170	0.034	0.333	0.0013%
chr10_5467007_A_G	chr10:5467007	-0.156	-0.152	-0.333	0.0013%
chr10_5412231_A_G	chr10:5412231	0.037	0.045	0.327	<0.001%
chr10_5412421_G_C	chr10:5412421	0.153	0.032	0.327	<0.001%
chr10_5446654_C_G	chr10:5446654	-0.206	-0.032	-0.111	<0.001%
chr10_5412602_G_A	chr10:5412602	0.171	0.178	0.324	0.0013%
chr10_5412475_C_G	chr10:5412475	-0.066	-0.061	-0.320	<0.001%
chr10_5412532_T_A	chr10:5412532	-0.107	-0.024	0.320	<0.001%
chr10_5446442_T_C	chr10:5446442	-0.202	-0.105	-0.085	0.0020%
chr10_5446503_T_A	chr10:5446503	-0.202	-0.166	-0.078	<0.001%
chr10_5466676_G_T	chr10:5466676	-0.101	-0.034	-0.320	<0.001%
chr10_5446666_G_A	chr10:5446666	-0.200	0.029	-0.046	<0.001%
chr10_5446714_C_T	chr10:5446714	-0.200	-0.067	-0.072	0.0013%
chr10_5466663_G_C	chr10:5466663	0.200	0.018	0.072	<0.001%
chr10_5446556_G_C	chr10:5446556	-0.192	-0.160	-0.314	<0.001%
chr10_5466321_C_T	chr10:5466321	-0.057	-0.141	-0.314	<0.001%
chr10_5413018_G_A	chr10:5413018	0.031	0.060	0.310	40.6%
chr10_5446663_G_C	chr10:5446663	-0.196	0.035	-0.144	0.0013%
chr10_5412921_G_A	chr10:5412921	0.020	0.045	0.307	1.26%
chr10_5413038_G_C	chr10:5413038	0.044	0.038	0.307	<0.001%
chr10_5446390_A_G	chr10:5446390	0.194	0.093	0.229	<0.001%
chr10_5446500_A_C	chr10:5446500	-0.194	-0.150	-0.183	<0.001%
chr10_5412820_G_A	chr10:5412820	-0.019	0.118	0.301	0.0013%
chr10_5446492_G_C	chr10:5446492	0.190	-0.006	0.163	0.217%
chr10_5466640_C_T	chr10:5466640	0.190	0.037	0.196	0.0053%
chr10_5413126_C_T	chr10:5413126	0.189	0.032	0.160	0.097%
chr10_5434191_A_G	chr10:5434191	-0.188	-0.109	-0.042	0.0013%
chr10_5413039_G_T	chr10:5413039	0.040	0.026	0.294	<0.001%
chr10_5446571_C_G	chr10:5446571	-0.186	0.227	0.157	<0.001%
chr10_5466983_T_A	chr10:5466983	0.084	0.096	0.294	<0.001%
chr10_5446547_G_T	chr10:5446547	-0.148	-0.080	-0.288	<0.001%
chr10_5412661_C_T	chr10:5412661	-0.031	0.064	0.286	0.0013%
chr10_5446680_A_G	chr10:5446680	-0.179	-0.058	-0.105	<0.001%
chr10_5412518_G_A	chr10:5412518	0.177	0.018	0.268	0.0013%
chr10_5446697_G_A	chr10:5446697	-0.177	-0.077	-0.196	<0.001%
chr10_5466193_C_T	chr10:5466193	-0.037	-0.123	-0.281	<0.001%
chr10_5466773_G_A	chr10:5466773	-0.109	-0.125	-0.281	<0.001%
chr10_5466642_T_C	chr10:5466642	-0.175	-0.121	-0.242	<0.001%
chr10_5466907_G_T	chr10:5466907	0.106	0.086	0.275	0.0013%
chr10_5467784_C_G	chr10:5467784	0.007	0.029	0.246	—
chr10_5412862_A_G	chr10:5412862	-0.036	-0.058	-0.271	0.0027%
chr10_5466691_C_T	chr10:5466691	-0.171	-0.085	-0.242	0.0013%
chr10_5413051_G_C	chr10:5413051	0.040	0.050	0.270	<0.001%
chr10_5412559_A_G	chr10:5412559	0.136	0.009	0.268	0.0013%
chr10_5446621_T_G	chr10:5446621	0.080	0.147	0.268	<0.001%
chr10_5434207_T_C	chr10:5434207	-0.167	-0.042	-0.039	0.0013%
chr10_5466370_C_A	chr10:5466370	0.167	0.102	0.248	<0.001%
chr10_5412960_G_T	chr10:5412960	0.060	0.049	0.263	<0.001%
chr10_5412575_G_A	chr10:5412575	0.078	0.160	0.261	<0.001%
chr10_5466968_C_T	chr10:5466968	-0.053	-0.080	-0.261	0.0099%
chr10_5413044_G_A	chr10:5413044	0.044	0.031	0.258	<0.001%
chr10_5466632_T_C	chr10:5466632	0.163	0.056	0.150	<0.001%
chr10_5466896_G_A	chr10:5466896	-0.026	0.022	0.255	0.0033%
chr10_5467779_C_A	chr10:5467779	0.002	0.050	0.228	—
chr10_5412476_G_A	chr10:5412476	-0.157	-0.011	-0.131	0.0013%
chr10_5412525_G_A	chr10:5412525	-0.039	-0.029	0.248	<0.001%
chr10_5466284_G_A	chr10:5466284	0.144	0.157	0.248	0.0020%
chr10_5466844_C_G	chr10:5466844	0.109	0.089	0.248	<0.001%
chr10_5467779_C_G	chr10:5467779	-0.007	0.035	0.222	—
chr10_5412834_A_T	chr10:5412834	-0.113	-0.084	-0.247	0.014%
chr10_5412701_C_T	chr10:5412701	0.094	0.063	0.245	0.0020%
chr10_5446652_T_C	chr10:5446652	-0.155	-0.083	-0.118	<0.001%
chr10_5446861_A_G	chr10:5446861	-0.155	0.064	0.092	0.098%
chr10_5466792_C_A	chr10:5466792	0.155	0.107	0.098	<0.001%
chr10_5412206_A_T	chr10:5412206	0.064	0.051	0.242	<0.001%
chr10_5412252_A_G	chr10:5412252	0.064	0.051	0.242	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.