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CCDC40
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CCDC40
chr17:79,936,631..80,200,613, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_80008576_C_T | chr17:80008576 | -1.000 | -1.000 | -1.000 | — |
| chr17_80008576_C_G | chr17:80008576 | -1.000 | -0.972 | -1.000 | — |
| chr17_80008581_G_C | chr17:80008581 | -1.000 | -0.861 | -1.000 | — |
| chr17_80008576_C_A | chr17:80008576 | -1.000 | -0.849 | -1.000 | — |
| chr17_80008581_G_T | chr17:80008581 | -1.000 | -0.798 | -1.000 | — |
| chr17_80008585_G_A | chr17:80008585 | -1.000 | -0.587 | -1.000 | — |
| chr17_80008585_G_C | chr17:80008585 | -1.000 | -0.496 | -0.955 | — |
| chr17_80008582_G_C | chr17:80008582 | -1.000 | -0.791 | -1.000 | — |
| chr17_80008580_A_C | chr17:80008580 | -1.000 | -0.728 | -1.000 | — |
| chr17_80008581_G_A | chr17:80008581 | -1.000 | -0.715 | -1.000 | <0.001% |
| chr17_80008584_G_C | chr17:80008584 | -1.000 | -0.564 | -1.000 | — |
| chr17_80008628_G_A | chr17:80008628 | 1.000 | 1.000 | 0.955 | — |
| chr17_80008585_G_T | chr17:80008585 | -1.000 | -0.458 | -0.888 | <0.001% |
| chr17_80008584_G_A | chr17:80008584 | -1.000 | -0.514 | -1.000 | — |
| chr17_80008582_G_T | chr17:80008582 | -1.000 | -0.542 | -1.000 | — |
| chr17_80008584_G_T | chr17:80008584 | -1.000 | -0.385 | -0.831 | — |
| chr17_80008663_T_G | chr17:80008663 | -1.000 | -0.516 | -0.539 | — |
| chr17_80008643_C_G | chr17:80008643 | -1.000 | -0.567 | -0.629 | — |
| chr17_80008637_C_T | chr17:80008637 | -1.000 | -0.579 | -0.640 | — |
| chr17_80008643_C_A | chr17:80008643 | -1.000 | -0.577 | -0.697 | — |
| chr17_80008631_T_G | chr17:80008631 | 1.000 | 0.615 | 0.618 | — |
| chr17_80008682_A_C | chr17:80008682 | -1.000 | -0.476 | -0.697 | — |
| chr17_80008644_T_G | chr17:80008644 | -1.000 | -0.370 | -0.461 | — |
| chr17_80008634_G_A | chr17:80008634 | 1.000 | 0.589 | 0.629 | 0.0013% |
| chr17_80008642_C_T | chr17:80008642 | -1.000 | -0.390 | -0.539 | — |
| chr17_80008642_C_G | chr17:80008642 | -1.000 | -0.408 | -0.528 | — |
| chr17_80008624_A_T | chr17:80008624 | 1.000 | 0.783 | 0.652 | — |
| chr17_80008643_C_T | chr17:80008643 | -1.000 | -0.433 | -0.472 | — |
| chr17_80008642_C_A | chr17:80008642 | -1.000 | -0.355 | -0.494 | — |
| chr17_80008635_G_A | chr17:80008635 | -1.000 | -0.418 | -0.461 | — |
| chr17_80008632_T_C | chr17:80008632 | 1.000 | 0.403 | 0.494 | — |
| chr17_80008644_T_A | chr17:80008644 | -1.000 | -0.350 | -0.483 | — |
| chr17_80008587_G_T | chr17:80008587 | -0.961 | -0.106 | -0.629 | — |
| chr17_80008699_T_C | chr17:80008699 | -0.941 | -0.345 | -0.506 | — |
| chr17_80008680_C_T | chr17:80008680 | 0.849 | 0.219 | 0.472 | — |
| chr17_80008637_C_A | chr17:80008637 | -0.830 | -0.345 | -0.416 | — |
| chr17_80008587_G_C | chr17:80008587 | -0.800 | -0.113 | -0.461 | 0.0026% |
| chr17_80008586_A_G | chr17:80008586 | -0.787 | -0.292 | -0.607 | — |
| chr17_80008681_C_A | chr17:80008681 | 0.708 | 0.574 | 1.000 | — |
| chr17_80008621_A_C | chr17:80008621 | -0.770 | -0.325 | -0.483 | — |
| chr17_80008687_G_C | chr17:80008687 | -0.741 | -0.348 | -0.494 | — |
| chr17_80008667_C_A | chr17:80008667 | -0.731 | -0.257 | -0.202 | — |
| chr17_80008625_C_G | chr17:80008625 | 0.698 | 0.343 | 0.371 | — |
| chr17_80008645_C_G | chr17:80008645 | -0.692 | -0.315 | -0.326 | — |
| chr17_80008578_C_A | chr17:80008578 | -0.685 | -0.259 | -0.427 | — |
| chr17_80008635_G_T | chr17:80008635 | 0.682 | 0.378 | 0.326 | — |
| chr17_80008637_C_G | chr17:80008637 | -0.682 | -0.239 | -0.281 | — |
| chr17_80008647_C_G | chr17:80008647 | 0.669 | 0.239 | 0.393 | — |
| chr17_80008632_T_A | chr17:80008632 | 0.666 | 0.171 | 0.292 | — |
| chr17_80008577_A_C | chr17:80008577 | -0.662 | -0.116 | -0.371 | — |
| chr17_80008583_G_T | chr17:80008583 | 0.659 | 0.141 | 0.067 | — |
| chr17_80008628_G_T | chr17:80008628 | 0.646 | 0.239 | 0.337 | — |
| chr17_80008580_A_T | chr17:80008580 | -0.633 | -0.292 | -0.584 | — |
| chr17_80008608_C_G | chr17:80008608 | -0.633 | -0.174 | -0.360 | <0.001% |
| chr17_80008634_G_C | chr17:80008634 | 0.630 | 0.146 | 0.427 | 0.0013% |
| chr17_80008635_G_C | chr17:80008635 | 0.630 | 0.287 | 0.315 | — |
| chr17_80008634_G_T | chr17:80008634 | 0.623 | 0.159 | 0.270 | 0.0013% |
| chr17_80008640_C_G | chr17:80008640 | -0.620 | -0.191 | -0.180 | — |
| chr17_80008664_T_A | chr17:80008664 | -0.616 | -0.244 | -0.348 | — |
| chr17_80008631_T_A | chr17:80008631 | 0.603 | 0.058 | 0.213 | — |
| chr17_80008659_C_T | chr17:80008659 | -0.590 | -0.267 | -0.326 | — |
| chr17_80008631_T_C | chr17:80008631 | 0.587 | -0.038 | 0.236 | — |
| chr17_80008639_C_A | chr17:80008639 | 0.587 | 0.164 | 0.247 | — |
| chr17_80008640_C_A | chr17:80008640 | -0.574 | -0.174 | -0.146 | — |
| chr17_80008621_A_G | chr17:80008621 | -0.564 | -0.242 | -0.404 | — |
| chr17_80008667_C_T | chr17:80008667 | -0.561 | -0.244 | -0.270 | — |
| chr17_80008609_G_T | chr17:80008609 | 0.554 | 0.237 | 0.404 | — |
| chr17_80008611_G_T | chr17:80008611 | -0.554 | -0.280 | -0.539 | — |
| chr17_80008639_C_G | chr17:80008639 | 0.554 | 0.103 | 0.326 | — |
| chr17_80008687_G_T | chr17:80008687 | -0.554 | -0.310 | -0.449 | — |
| chr17_80008651_C_A | chr17:80008651 | -0.548 | -0.204 | -0.270 | — |
| chr17_80008627_A_C | chr17:80008627 | -0.531 | -0.224 | -0.101 | — |
| chr17_80008651_C_G | chr17:80008651 | -0.531 | -0.189 | -0.202 | — |
| chr17_80008625_C_T | chr17:80008625 | 0.525 | 0.413 | 0.281 | — |
| chr17_80008537_G_T | chr17:80008537 | 0.508 | 0.141 | 0.685 | — |
| chr17_80008622_G_A | chr17:80008622 | 0.505 | 0.171 | 0.326 | — |
| chr17_80008703_G_C | chr17:80008703 | -0.505 | -0.277 | -0.416 | — |
| chr17_80008672_G_C | chr17:80008672 | -0.502 | -0.141 | -0.337 | — |
| chr17_80008703_G_T | chr17:80008703 | -0.502 | -0.280 | -0.494 | — |
| chr17_80008678_C_T | chr17:80008678 | -0.495 | -0.131 | -0.258 | 0.0079% |
| chr17_80008638_C_T | chr17:80008638 | 0.489 | 0.131 | 0.292 | — |
| chr17_80008639_C_T | chr17:80008639 | -0.489 | -0.234 | -0.191 | — |
| chr17_80008662_G_T | chr17:80008662 | -0.485 | -0.171 | -0.202 | — |
| chr17_80008523_G_C | chr17:80008523 | 0.475 | 0.217 | 0.404 | — |
| chr17_80008588_C_G | chr17:80008588 | -0.469 | -0.015 | -0.404 | — |
| chr17_80008616_A_C | chr17:80008616 | -0.469 | -0.088 | -0.157 | — |
| chr17_80008661_G_T | chr17:80008661 | 0.466 | 0.128 | 0.258 | — |
| chr17_80008666_C_G | chr17:80008666 | 0.462 | 0.222 | 0.258 | — |
| chr17_80008578_C_T | chr17:80008578 | -0.456 | -0.209 | -0.472 | <0.001% |
| chr17_80008620_C_G | chr17:80008620 | -0.452 | -0.249 | -0.461 | — |
| chr17_80008625_C_A | chr17:80008625 | 0.452 | 0.232 | 0.270 | <0.001% |
| chr17_80008640_C_T | chr17:80008640 | -0.452 | -0.091 | -0.135 | — |
| chr17_80008647_C_A | chr17:80008647 | 0.452 | 0.154 | 0.225 | — |
| chr17_80008674_C_G | chr17:80008674 | 0.449 | 0.242 | 0.225 | — |
| chr17_80008653_C_T | chr17:80008653 | -0.446 | -0.199 | -0.303 | — |
| chr17_80008610_G_A | chr17:80008610 | -0.443 | -0.171 | -0.416 | — |
| chr17_80008646_C_G | chr17:80008646 | -0.443 | -0.169 | -0.090 | — |
| chr17_80008654_C_G | chr17:80008654 | 0.433 | 0.247 | 0.315 | — |
| chr17_80008618_G_A | chr17:80008618 | -0.430 | -0.194 | -0.404 | — |
| chr17_80008671_C_G | chr17:80008671 | -0.426 | -0.103 | -0.281 | — |
| chr17_80008646_C_A | chr17:80008646 | -0.423 | -0.159 | -0.124 | — |
| chr17_80008619_C_A | chr17:80008619 | -0.416 | -0.217 | -0.506 | — |
| chr17_80008587_G_A | chr17:80008587 | -0.413 | 0.020 | -0.393 | 0.0013% |
| chr17_80008666_C_A | chr17:80008666 | 0.403 | 0.315 | 0.135 | — |
| chr17_80008667_C_G | chr17:80008667 | -0.400 | -0.101 | -0.067 | — |
| chr17_80008679_G_C | chr17:80008679 | -0.397 | -0.217 | -0.382 | — |
| chr17_80008683_C_G | chr17:80008683 | 0.397 | 0.146 | 0.360 | — |
| chr17_80008630_G_C | chr17:80008630 | 0.393 | 0.010 | 0.135 | — |
| chr17_80008661_G_C | chr17:80008661 | 0.393 | 0.128 | 0.135 | — |
| chr17_80008610_G_T | chr17:80008610 | 0.387 | 0.315 | 0.034 | — |
| chr17_80008560_A_C | chr17:80008560 | 0.384 | 0.194 | 0.112 | — |
| chr17_80008623_G_C | chr17:80008623 | 0.380 | -0.013 | 0.135 | — |
| chr17_80008660_G_A | chr17:80008660 | -0.380 | -0.139 | -0.247 | 0.0085% |
| chr17_80008573_C_G | chr17:80008573 | -0.374 | -0.151 | -0.247 | — |
| chr17_80008605_C_A | chr17:80008605 | 0.367 | 0.096 | 0.236 | — |
| chr17_80008616_A_T | chr17:80008616 | -0.367 | -0.078 | -0.124 | — |
| chr17_79945653_T_G | chr17:79945653 | 0.241 | -0.004 | 0.624 | — |
| chr17_80008614_C_T | chr17:80008614 | 0.364 | 0.111 | 0.135 | — |
| chr17_80008629_A_G | chr17:80008629 | -0.364 | -0.144 | -0.056 | — |
| chr17_80008651_C_T | chr17:80008651 | -0.361 | -0.126 | -0.225 | — |
| chr17_80008697_C_A | chr17:80008697 | -0.361 | -0.139 | -0.258 | — |
| chr17_80008664_T_C | chr17:80008664 | -0.357 | -0.111 | -0.180 | — |
| chr17_80008655_T_C | chr17:80008655 | -0.354 | -0.050 | -0.213 | — |
| chr17_80008653_C_A | chr17:80008653 | -0.348 | -0.144 | -0.191 | <0.001% |
| chr17_80008695_A_C | chr17:80008695 | 0.348 | 0.166 | 0.213 | — |
| chr17_80008614_C_G | chr17:80008614 | 0.344 | 0.063 | 0.146 | — |
| chr17_80008592_G_C | chr17:80008592 | -0.341 | -0.081 | -0.101 | — |
| chr17_80008523_G_T | chr17:80008523 | 0.334 | 0.159 | 0.213 | <0.001% |
| chr17_80008559_C_G | chr17:80008559 | 0.334 | 0.068 | -0.045 | — |
| chr17_80008659_C_G | chr17:80008659 | -0.334 | -0.065 | -0.067 | — |
| chr17_80008676_G_C | chr17:80008676 | -0.334 | -0.154 | -0.180 | — |
| chr17_80008698_C_A | chr17:80008698 | -0.334 | -0.161 | -0.438 | — |
| chr17_80008674_C_T | chr17:80008674 | -0.331 | -0.144 | -0.247 | — |
| chr17_80008678_C_A | chr17:80008678 | -0.328 | -0.149 | -0.213 | 0.0020% |
| chr17_80008632_T_G | chr17:80008632 | 0.325 | -0.008 | 0.180 | — |
| chr17_80008580_A_G | chr17:80008580 | -0.321 | -0.181 | -0.393 | — |
| chr17_80008678_C_G | chr17:80008678 | -0.321 | -0.136 | -0.090 | — |
| chr17_80008542_G_C | chr17:80008542 | -0.318 | -0.035 | -0.011 | — |
| chr17_80008665_C_A | chr17:80008665 | -0.318 | -0.033 | -0.146 | — |
| chr17_80008671_C_A | chr17:80008671 | -0.315 | -0.083 | -0.281 | — |
| chr17_80008677_A_C | chr17:80008677 | -0.315 | -0.166 | -0.157 | — |
| chr17_80008579_C_G | chr17:80008579 | 0.311 | -0.005 | -0.067 | — |
| chr17_80008611_G_A | chr17:80008611 | -0.311 | -0.171 | -0.292 | — |
| chr17_80008641_G_C | chr17:80008641 | 0.308 | -0.058 | -0.079 | — |
| chr17_80008622_G_T | chr17:80008622 | 0.305 | 0.128 | 0.067 | — |
| chr17_80008629_A_C | chr17:80008629 | 0.305 | -0.013 | 0.225 | — |
| chr17_80008685_C_T | chr17:80008685 | 0.305 | 0.045 | 0.011 | — |
| chr17_80008657_C_G | chr17:80008657 | 0.302 | 0.131 | 0.180 | — |
| chr17_80008597_A_C | chr17:80008597 | 0.298 | 0.030 | 0.045 | — |
| chr17_80008612_A_C | chr17:80008612 | 0.298 | 0.121 | 0.191 | — |
| chr17_80008540_A_G | chr17:80008540 | -0.295 | -0.035 | -0.045 | — |
| chr17_80008608_C_A | chr17:80008608 | -0.289 | -0.065 | -0.225 | — |
| chr17_80008624_A_G | chr17:80008624 | 0.289 | 0.219 | 0.270 | — |
| chr17_80008644_T_C | chr17:80008644 | -0.193 | -0.141 | -0.494 | — |
| chr17_80008649_C_T | chr17:80008649 | -0.289 | -0.139 | -0.202 | — |
| chr17_80008620_C_A | chr17:80008620 | -0.282 | -0.146 | -0.371 | — |
| chr17_80008650_A_T | chr17:80008650 | -0.275 | -0.053 | -0.146 | — |
| chr17_80008652_A_G | chr17:80008652 | 0.275 | 0.171 | 0.247 | — |
| chr17_80008691_A_G | chr17:80008691 | 0.275 | 0.123 | 0.202 | — |
| chr17_80008532_A_T | chr17:80008532 | 0.272 | 0.290 | 0.315 | — |
| chr17_80008614_C_A | chr17:80008614 | 0.272 | 0.065 | 0.056 | — |
| chr17_80008655_T_G | chr17:80008655 | 0.272 | 0.128 | 0.270 | — |
| chr17_80008669_G_T | chr17:80008669 | -0.272 | -0.139 | -0.169 | — |
| chr17_80008690_C_T | chr17:80008690 | 0.272 | 0.073 | 0.079 | <0.001% |
| chr17_79945717_T_A | chr17:79945717 | 0.205 | 0.106 | 0.461 | — |
| chr17_80008660_G_T | chr17:80008660 | 0.269 | 0.126 | 0.079 | <0.001% |
| chr17_80008612_A_T | chr17:80008612 | -0.266 | -0.101 | -0.225 | — |
| chr17_80008620_C_T | chr17:80008620 | -0.266 | -0.136 | -0.315 | <0.001% |
| chr17_80008633_C_T | chr17:80008633 | 0.266 | -0.015 | 0.056 | — |
| chr17_80008534_A_C | chr17:80008534 | -0.262 | -0.081 | -0.169 | — |
| chr17_80008535_C_G | chr17:80008535 | -0.262 | -0.065 | -0.157 | — |
| chr17_80008621_A_T | chr17:80008621 | -0.262 | -0.166 | -0.281 | — |
| chr17_80008623_G_T | chr17:80008623 | 0.262 | 0.030 | -0.112 | — |
| chr17_80008675_T_C | chr17:80008675 | -0.262 | -0.154 | -0.135 | — |
| chr17_80008613_C_A | chr17:80008613 | 0.259 | 0.093 | 0.112 | — |
| chr17_80008649_C_A | chr17:80008649 | -0.256 | -0.118 | -0.169 | 0.0072% |
| chr17_80008660_G_C | chr17:80008660 | 0.256 | 0.113 | 0.124 | — |
| chr17_80008700_C_G | chr17:80008700 | 0.256 | 0.098 | 0.157 | — |
| chr17_80008627_A_T | chr17:80008627 | -0.249 | -0.096 | -0.011 | — |
| chr17_80008653_C_G | chr17:80008653 | -0.249 | -0.116 | -0.079 | — |
| chr17_80008680_C_G | chr17:80008680 | -0.249 | -0.091 | -0.056 | — |
| chr17_80008606_T_A | chr17:80008606 | 0.246 | 0.103 | 0.180 | — |
| chr17_80008535_C_A | chr17:80008535 | -0.243 | -0.088 | -0.169 | — |
| chr17_80008582_G_A | chr17:80008582 | 0.243 | 0.023 | -0.011 | — |
| chr17_80008693_C_G | chr17:80008693 | -0.243 | -0.083 | -0.112 | — |
| chr17_80008696_G_A | chr17:80008696 | 0.243 | 0.128 | 0.034 | — |
| chr17_80008701_C_A | chr17:80008701 | -0.243 | -0.174 | -0.225 | — |
| chr17_80008686_A_C | chr17:80008686 | -0.239 | -0.118 | -0.169 | — |
| chr17_80008687_G_A | chr17:80008687 | -0.239 | -0.096 | -0.157 | — |
| chr17_80008523_G_A | chr17:80008523 | 0.236 | 0.093 | 0.236 | — |
| chr17_80008586_A_C | chr17:80008586 | -0.236 | -0.093 | 0.011 | — |
| chr17_80008588_C_A | chr17:80008588 | -0.236 | -0.013 | -0.337 | — |
| chr17_80008611_G_C | chr17:80008611 | -0.236 | -0.128 | -0.225 | <0.001% |
| chr17_80008658_T_G | chr17:80008658 | 0.236 | 0.121 | 0.213 | — |
| chr17_80008679_G_A | chr17:80008679 | -0.236 | -0.111 | -0.191 | 0.012% |
| chr17_80008559_C_A | chr17:80008559 | 0.233 | 0.093 | -0.090 | — |
| chr17_80008608_C_T | chr17:80008608 | -0.233 | -0.053 | -0.124 | 0.0039% |
| chr17_80008681_C_T | chr17:80008681 | -0.233 | -0.128 | -0.202 | — |
| chr17_80008629_A_T | chr17:80008629 | 0.230 | 0.008 | 0.090 | — |
| chr17_80008633_C_A | chr17:80008633 | 0.230 | -0.013 | 0.067 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.