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CDHR5

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near CDHR5

chr11:516,564..724,955, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr11_518943_C_A	chr11:518943	-1.000	-0.069	-0.621	0.346%
chr11_518942_G_C	chr11:518942	-1.000	-0.045	-1.000	<0.001%
chr11_518943_C_T	chr11:518943	-1.000	-0.038	-0.366	0.083%
chr11_518902_C_G	chr11:518902	-0.773	-0.104	-0.824	0.013%
chr11_518704_G_A	chr11:518704	-0.741	-0.249	-0.549	<0.001%
chr11_518944_C_T	chr11:518944	-0.736	0.011	-0.281	<0.001%
chr11_518911_G_T	chr11:518911	-0.732	-0.029	-0.693	<0.001%
chr11_518641_T_C	chr11:518641	0.709	0.355	0.680	0.0020%
chr11_518800_C_T	chr11:518800	-0.272	0.021	1.000	<0.001%
chr11_521059_C_T	chr11:521059	0.501	0.522	0.980	0.0013%
chr11_518746_A_T	chr11:518746	0.610	0.235	0.444	<0.001%
chr11_536116_T_C	chr11:536116	-0.140	-0.133	-0.954	<0.001%
chr11_518705_T_G	chr11:518705	-0.505	-0.035	-0.902	0.0013%
chr11_518511_T_C	chr11:518511	0.544	0.457	0.850	0.0020%
chr11_521119_G_A	chr11:521119	-0.328	-0.332	-0.837	32.2%
chr11_518905_G_A	chr11:518905	0.526	0.166	0.693	<0.001%
chr11_518913_G_C	chr11:518913	-0.480	0.027	-0.444	0.0060%
chr11_518605_G_A	chr11:518605	0.466	-0.032	0.353	0.0013%
chr11_518912_T_C	chr11:518912	-0.466	-0.018	-0.536	0.140%
chr11_518709_G_C	chr11:518709	-0.460	-0.061	-0.261	<0.001%
chr11_518875_T_G	chr11:518875	-0.454	-0.056	-0.431	0.013%
chr11_518623_G_A	chr11:518623	0.449	0.147	0.680	<0.001%
chr11_518912_T_A	chr11:518912	-0.433	0.014	-0.458	0.0014%
chr11_518636_A_G	chr11:518636	0.159	0.280	0.680	<0.001%
chr11_535724_G_A	chr11:535724	0.101	0.143	0.658	0.0013%
chr11_518688_G_C	chr11:518688	0.396	0.104	-0.092	0.018%
chr11_518880_C_A	chr11:518880	-0.396	-0.014	-0.078	0.0047%
chr11_535726_G_A	chr11:535726	0.074	0.122	0.626	0.014%
chr11_518549_T_A	chr11:518549	0.271	0.176	0.614	0.047%
chr11_518796_C_T	chr11:518796	0.107	-0.038	0.614	0.0020%
chr11_518803_C_T	chr11:518803	-0.379	-0.065	-0.196	<0.001%
chr11_535923_T_C	chr11:535923	-0.064	-0.112	-0.601	<0.001%
chr11_518862_G_T	chr11:518862	0.367	0.094	0.418	0.128%
chr11_536113_A_C	chr11:536113	-0.080	-0.070	-0.562	<0.001%
chr11_519008_G_C	chr11:519008	-0.353	0.005	-0.157	0.0033%
chr11_521118_C_T	chr11:521118	0.199	0.227	0.556	0.0013%
chr11_518800_C_G	chr11:518800	-0.260	-0.153	0.549	<0.001%
chr11_535777_G_A	chr11:535777	0.023	0.187	0.547	<0.001%
chr11_518957_G_C	chr11:518957	0.340	0.093	0.150	<0.001%
chr11_518872_C_T	chr11:518872	-0.334	0.011	-0.092	<0.001%
chr11_518776_G_T	chr11:518776	0.082	0.120	0.523	0.0020%
chr11_535903_G_A	chr11:535903	0.010	0.083	0.523	0.0013%
chr11_535928_C_T	chr11:535928	0.023	0.075	0.523	<0.001%
chr11_518767_G_T	chr11:518767	0.037	0.123	0.510	0.0013%
chr11_518922_T_A	chr11:518922	-0.309	-0.094	-0.144	<0.001%
chr11_535542_C_G	chr11:535542	0.307	0.053	0.163	<0.001%
chr11_518901_G_A	chr11:518901	0.235	0.176	0.484	0.0015%
chr11_535098_T_G	chr11:535098	-0.032	-0.061	-0.479	24.5%
chr11_518769_C_G	chr11:518769	-0.301	0.016	-0.065	0.0013%
chr11_535926_G_T	chr11:535926	0.016	0.077	0.471	<0.001%
chr11_518621_C_T	chr11:518621	0.293	0.118	0.405	<0.001%
chr11_535744_G_A	chr11:535744	0.293	0.281	0.452	0.0033%
chr11_519004_C_G	chr11:519004	-0.290	0.011	-0.134	0.0020%
chr11_521110_C_G	chr11:521110	-0.207	-0.216	-0.458	<0.001%
chr11_535925_C_T	chr11:535925	0.023	0.073	0.458	<0.001%
chr11_536029_C_A	chr11:536029	0.031	0.029	0.458	0.264%
chr11_535653_A_C	chr11:535653	-0.136	-0.149	-0.453	0.0013%
chr11_518799_C_A	chr11:518799	-0.280	-0.112	0.222	0.0013%
chr11_535095_T_C	chr11:535095	-0.095	-0.034	-0.439	<0.001%
chr11_518790_G_T	chr11:518790	0.276	0.113	0.209	0.0013%
chr11_518625_C_G	chr11:518625	0.031	-0.003	0.431	0.0026%
chr11_518838_C_A	chr11:518838	0.091	0.115	0.431	<0.001%
chr11_518939_C_A	chr11:518939	-0.268	0.010	0.026	0.0026%
chr11_535474_G_T	chr11:535474	0.267	0.002	0.026	0.113%
chr11_518940_C_A	chr11:518940	0.260	0.089	0.418	<0.001%
chr11_518613_C_T	chr11:518613	0.262	0.117	0.301	0.0020%
chr11_518981_C_T	chr11:518981	-0.262	-0.006	0.026	0.051%
chr11_535113_G_A	chr11:535113	0.013	0.049	0.412	<0.001%
chr11_518996_G_A	chr11:518996	-0.259	0.005	0.307	<0.001%
chr11_518909_G_C	chr11:518909	-0.258	0.096	-0.196	0.0013%
chr11_518847_C_T	chr11:518847	-0.037	0.026	0.405	<0.001%
chr11_535875_C_T	chr11:535875	0.021	0.058	0.405	<0.001%
chr11_518965_C_A	chr11:518965	-0.254	-0.048	0.105	0.0026%
chr11_535086_G_A	chr11:535086	0.028	0.046	0.395	0.0013%
chr11_518591_G_C	chr11:518591	-0.248	-0.077	-0.131	<0.001%
chr11_518863_A_G	chr11:518863	-0.223	-0.105	-0.392	0.0013%
chr11_518867_G_C	chr11:518867	-0.247	-0.064	-0.314	<0.001%
chr11_518881_G_C	chr11:518881	-0.247	0.045	-0.261	0.050%
chr11_518983_C_T	chr11:518983	0.013	0.035	0.392	<0.001%
chr11_521112_C_T	chr11:521112	-0.206	-0.208	-0.392	0.0026%
chr11_536134_A_C	chr11:536134	-0.043	-0.067	-0.392	<0.001%
chr11_518978_C_T	chr11:518978	-0.062	0.110	0.386	<0.001%
chr11_535089_G_A	chr11:535089	0.032	0.047	0.386	<0.001%
chr11_535128_G_A	chr11:535128	0.037	0.043	0.380	0.0053%
chr11_518784_G_C	chr11:518784	-0.219	-0.109	-0.379	<0.001%
chr11_518792_G_A	chr11:518792	0.025	0.080	0.379	0.0053%
chr11_536141_C_A	chr11:536141	0.041	0.038	0.379	0.0013%
chr11_535553_G_T	chr11:535553	-0.033	-0.065	0.377	<0.001%
chr11_518922_T_C	chr11:518922	-0.235	-0.115	-0.105	<0.001%
chr11_518910_C_T	chr11:518910	-0.233	-0.022	-0.340	0.0021%
chr11_518964_G_C	chr11:518964	-0.233	0.029	-0.033	<0.001%
chr11_535087_C_T	chr11:535087	0.025	0.035	0.367	0.0020%
chr11_518748_C_T	chr11:518748	0.138	0.113	0.366	<0.001%
chr11_518773_G_A	chr11:518773	0.062	0.085	0.366	<0.001%
chr11_518802_C_A	chr11:518802	-0.107	0.110	0.366	0.0026%
chr11_518818_G_T	chr11:518818	0.153	0.073	0.366	<0.001%
chr11_518844_A_C	chr11:518844	-0.107	-0.094	-0.366	<0.001%
chr11_518900_G_A	chr11:518900	0.105	0.125	0.366	0.157%
chr11_521074_C_G	chr11:521074	0.174	0.220	0.366	<0.001%
chr11_535929_G_A	chr11:535929	0.027	0.053	0.366	0.0013%
chr11_535721_G_A	chr11:535721	0.008	0.101	0.363	<0.001%
chr11_518738_C_T	chr11:518738	-0.227	0.030	-0.013	<0.001%
chr11_518846_G_C	chr11:518846	-0.227	-0.010	-0.105	<0.001%
chr11_535092_G_A	chr11:535092	0.003	0.051	0.359	0.0079%
chr11_519007_C_A	chr11:519007	-0.226	-0.003	0.124	0.0013%
chr11_535154_G_A	chr11:535154	0.025	0.035	0.355	0.0020%
chr11_535599_G_T	chr11:535599	0.105	0.116	0.355	0.0013%
chr11_535118_G_A	chr11:535118	0.022	0.040	0.355	<0.001%
chr11_518752_C_A	chr11:518752	-0.002	0.102	0.353	0.099%
chr11_518793_G_A	chr11:518793	-0.223	0.014	0.261	<0.001%
chr11_535141_C_T	chr11:535141	0.028	0.042	0.351	0.242%
chr11_518767_G_C	chr11:518767	-0.221	-0.061	0.078	<0.001%
chr11_518750_G_A	chr11:518750	0.041	0.078	0.340	<0.001%
chr11_518777_C_T	chr11:518777	0.124	0.115	0.340	0.0026%
chr11_518849_C_A	chr11:518849	-0.004	0.083	0.340	<0.001%
chr11_521137_C_T	chr11:521137	-0.101	-0.126	-0.340	0.026%
chr11_535911_A_G	chr11:535911	-0.019	-0.043	-0.340	<0.001%
chr11_518593_G_A	chr11:518593	0.213	0.048	0.301	<0.001%
chr11_535739_C_T	chr11:535739	0.212	0.194	0.318	0.0020%
chr11_519045_T_C	chr11:519045	-0.212	-0.027	-0.234	4.58%
chr11_518691_C_G	chr11:518691	0.210	-0.026	0.157	0.0013%
chr11_535143_G_A	chr11:535143	0.038	0.037	0.330	<0.001%
chr11_518542_C_G	chr11:518542	0.140	0.169	0.327	0.0020%
chr11_518681_C_G	chr11:518681	0.079	0.120	0.327	0.0013%
chr11_518714_A_G	chr11:518714	-0.206	-0.045	-0.118	0.0072%
chr11_518735_G_C	chr11:518735	-0.095	-0.195	-0.327	0.0039%
chr11_518749_C_T	chr11:518749	0.054	0.075	0.327	0.035%
chr11_518768_A_G	chr11:518768	-0.074	-0.069	-0.327	<0.001%
chr11_518807_A_G	chr11:518807	-0.087	-0.105	-0.327	<0.001%
chr11_518860_G_A	chr11:518860	0.161	0.081	0.327	0.0013%
chr11_535752_G_T	chr11:535752	-0.062	0.028	0.327	<0.001%
chr11_521278_C_A	chr11:521278	-0.020	-0.051	-0.320	<0.001%
chr11_535489_G_A	chr11:535489	0.201	0.030	0.130	<0.001%
chr11_519019_G_A	chr11:519019	-0.067	0.021	-0.317	0.0013%
chr11_535463_G_A	chr11:535463	0.199	0.016	0.094	10.4%
chr11_535503_A_G	chr11:535503	-0.199	-0.017	-0.194	0.0020%
chr11_518769_C_T	chr11:518769	-0.029	0.034	0.314	0.0020%
chr11_518789_C_T	chr11:518789	0.095	0.094	0.314	0.0046%
chr11_518850_G_T	chr11:518850	0.037	0.067	0.314	0.0013%
chr11_536064_T_G	chr11:536064	-0.008	-0.061	-0.314	0.0013%
chr11_518859_C_G	chr11:518859	-0.194	-0.048	-0.144	0.800%
chr11_535649_C_T	chr11:535649	0.155	0.166	0.305	24.1%
chr11_535091_C_A	chr11:535091	0.029	0.026	0.305	<0.001%
chr11_535152_G_A	chr11:535152	0.024	0.046	0.301	<0.001%
chr11_518622_C_T	chr11:518622	0.115	0.088	0.301	0.0013%
chr11_518667_C_A	chr11:518667	-0.190	-0.131	-0.105	<0.001%
chr11_518688_G_A	chr11:518688	0.190	0.037	-0.118	0.014%
chr11_518755_C_T	chr11:518755	0.002	0.051	0.301	0.0026%
chr11_518795_G_C	chr11:518795	-0.091	0.121	0.301	<0.001%
chr11_519034_G_A	chr11:519034	-0.050	0.054	0.301	0.0013%
chr11_536024_G_T	chr11:536024	0.043	0.019	0.301	0.0046%
chr11_536036_G_A	chr11:536036	0.010	0.059	0.301	<0.001%
chr11_536084_C_T	chr11:536084	0.019	0.053	0.301	0.0066%
chr11_518976_C_T	chr11:518976	-0.189	-0.032	-0.124	<0.001%
chr11_518798_C_T	chr11:518798	-0.186	-0.104	0.092	0.0013%
chr11_521093_C_T	chr11:521093	0.186	0.133	0.183	<0.001%
chr11_521222_A_G	chr11:521222	0.035	0.101	0.294	<0.001%
chr11_519007_C_G	chr11:519007	-0.184	-0.083	0.023	0.0092%
chr11_535671_G_T	chr11:535671	0.184	0.072	0.228	0.0013%
chr11_518772_G_T	chr11:518772	0.070	0.053	0.288	<0.001%
chr11_518779_G_T	chr11:518779	0.165	0.062	0.288	0.0039%
chr11_518880_C_T	chr11:518880	0.124	0.081	0.288	0.0020%
chr11_519019_G_T	chr11:519019	-0.037	0.024	-0.288	0.0020%
chr11_535829_G_A	chr11:535829	0.091	0.056	0.288	0.0033%
chr11_535851_C_T	chr11:535851	-0.021	0.030	0.288	<0.001%
chr11_535996_G_A	chr11:535996	0.037	0.051	0.288	<0.001%
chr11_519005_G_A	chr11:519005	-0.181	-0.011	-0.003	<0.001%
chr11_535088_G_T	chr11:535088	0.027	0.035	0.286	0.0013%
chr11_518709_G_A	chr11:518709	-0.179	0.022	0.065	<0.001%
chr11_518905_G_C	chr11:518905	0.179	0.032	0.235	0.0033%
chr11_535647_C_T	chr11:535647	0.146	0.110	0.283	<0.001%
chr11_535518_G_A	chr11:535518	0.177	0.033	0.128	<0.001%
chr11_535839_C_T	chr11:535839	0.000	0.065	0.281	0.054%
chr11_535111_C_T	chr11:535111	0.009	0.023	0.281	0.042%
chr11_535824_G_A	chr11:535824	0.175	0.003	0.111	0.0020%
chr11_535555_C_A	chr11:535555	0.093	0.047	0.277	0.0013%
chr11_518541_T_G	chr11:518541	0.056	0.067	0.275	0.0013%
chr11_518754_C_T	chr11:518754	0.120	0.061	0.275	<0.001%
chr11_518779_G_A	chr11:518779	0.099	0.075	0.275	0.0085%
chr11_518816_G_A	chr11:518816	0.128	0.073	0.275	0.018%
chr11_518885_G_A	chr11:518885	0.041	0.073	0.275	0.0028%
chr11_526325_C_T	chr11:526325	-0.108	-0.129	-0.275	0.0013%
chr11_535920_C_T	chr11:535920	0.014	0.093	0.275	0.0013%
chr11_519028_A_G	chr11:519028	0.091	0.264	0.271	0.0026%
chr11_535603_G_T	chr11:535603	0.171	0.060	0.204	<0.001%
chr11_518650_G_A	chr11:518650	-0.170	-0.053	-0.261	0.0053%
chr11_518575_C_T	chr11:518575	0.170	-0.061	0.052	0.0013%
chr11_518808_T_C	chr11:518808	0.169	0.053	0.065	9.78%
chr11_518820_C_G	chr11:518820	-0.169	-0.038	-0.052	0.0013%
chr11_521171_T_C	chr11:521171	-0.055	-0.096	-0.268	<0.001%
chr11_535764_G_C	chr11:535764	-0.169	-0.050	-0.160	0.0013%
chr11_535171_C_A	chr11:535171	0.044	0.028	0.268	0.0013%
chr11_535541_G_A	chr11:535541	0.168	0.028	0.168	0.0020%
chr11_535777_G_T	chr11:535777	-0.006	0.093	0.266	14.0%
chr11_518632_C_A	chr11:518632	0.167	0.125	0.092	0.585%
chr11_518654_T_A	chr11:518654	-0.167	-0.104	-0.222	0.0013%
chr11_518918_C_A	chr11:518918	-0.167	-0.048	-0.144	<0.001%
chr11_518637_T_C	chr11:518637	0.035	0.045	0.261	<0.001%
chr11_518753_C_A	chr11:518753	0.132	0.072	0.261	0.0033%
chr11_518756_G_C	chr11:518756	-0.165	0.018	-0.092	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.