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CEP104

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near CEP104

chr1:3,712,085..3,957,211, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_3733913_G_A	chr1:3733913	0.438	0.704	1.000	<0.001%
chr1_3733681_G_A	chr1:3733681	-0.564	-1.000	-1.000	0.0033%
chr1_3718181_G_T	chr1:3718181	-0.825	0.196	-0.026	<0.001%
chr1_3733510_G_A	chr1:3733510	0.795	0.789	1.000	<0.001%
chr1_3724589_C_T	chr1:3724589	-0.764	-0.283	-1.000	0.012%
chr1_3724588_C_T	chr1:3724588	-0.713	-0.216	-0.922	<0.001%
chr1_3718185_G_A	chr1:3718185	-0.605	0.198	0.405	<0.001%
chr1_3733683_C_T	chr1:3733683	-0.381	-0.661	-0.922	<0.001%
chr1_3727483_G_C	chr1:3727483	0.449	0.196	0.915	0.0026%
chr1_3733684_T_G	chr1:3733684	-0.338	-0.642	-0.843	<0.001%
chr1_3727473_C_T	chr1:3727473	-0.468	-0.277	-0.654	<0.001%
chr1_3733632_T_C	chr1:3733632	-0.286	-0.487	-0.725	<0.001%
chr1_3727481_G_A	chr1:3727481	-0.454	-0.276	-0.641	<0.001%
chr1_3718205_C_A	chr1:3718205	-0.290	-0.024	-0.693	<0.001%
chr1_3718188_C_T	chr1:3718188	-0.435	0.258	0.425	<0.001%
chr1_3718176_C_A	chr1:3718176	-0.418	0.208	0.170	0.0013%
chr1_3727470_C_T	chr1:3727470	-0.416	-0.249	-0.627	<0.001%
chr1_3718555_G_A	chr1:3718555	0.075	0.117	0.654	<0.001%
chr1_3733609_C_T	chr1:3733609	0.324	0.473	0.654	<0.001%
chr1_3718147_G_A	chr1:3718147	0.410	0.023	0.588	<0.001%
chr1_3718565_G_A	chr1:3718565	0.072	0.105	0.647	0.012%
chr1_3718540_G_T	chr1:3718540	0.085	0.097	0.634	<0.001%
chr1_3733743_C_G	chr1:3733743	-0.249	-0.366	-0.634	<0.001%
chr1_3733697_T_C	chr1:3733697	-0.236	-0.411	-0.569	0.0013%
chr1_3718541_G_A	chr1:3718541	0.053	0.099	0.549	0.0020%
chr1_3718559_A_G	chr1:3718559	-0.067	-0.069	-0.549	<0.001%
chr1_3733545_A_C	chr1:3733545	0.154	0.238	0.536	0.0013%
chr1_3717640_C_A	chr1:3717640	0.112	0.111	0.529	0.0053%
chr1_3718173_G_A	chr1:3718173	-0.321	0.056	-0.020	<0.001%
chr1_3733663_G_A	chr1:3733663	-0.189	-0.296	-0.497	0.0059%
chr1_3733516_T_A	chr1:3733516	0.203	0.297	0.458	<0.001%
chr1_3733700_C_G	chr1:3733700	-0.188	-0.359	-0.451	<0.001%
chr1_3733913_G_C	chr1:3733913	0.158	0.225	0.444	0.0091%
chr1_3733605_G_A	chr1:3733605	-0.140	-0.281	-0.431	<0.001%
chr1_3718129_C_T	chr1:3718129	0.258	0.015	0.255	<0.001%
chr1_3724543_C_T	chr1:3724543	0.256	0.017	0.163	<0.001%
chr1_3724598_G_A	chr1:3724598	-0.171	-0.059	-0.399	<0.001%
chr1_3718246_C_A	chr1:3718246	0.119	0.026	0.386	<0.001%
chr1_3724582_C_G	chr1:3724582	-0.241	-0.042	-0.229	<0.001%
chr1_3740012_T_G	chr1:3740012	0.186	0.141	0.333	—
chr1_3740013_G_A	chr1:3740013	0.164	0.126	0.330	—
chr1_3739987_T_G	chr1:3739987	0.162	0.045	0.327	—
chr1_3717451_G_A	chr1:3717451	0.084	0.031	0.356	0.0033%
chr1_3739981_T_C	chr1:3739981	0.178	0.144	0.287	—
chr1_3739952_A_G	chr1:3739952	0.175	0.378	0.281	—
chr1_3718190_C_G	chr1:3718190	-0.218	0.030	-0.209	<0.001%
chr1_3733595_C_T	chr1:3733595	0.189	0.296	0.340	0.0026%
chr1_3733730_A_G	chr1:3733730	0.197	0.256	0.340	0.0026%
chr1_3734014_C_T	chr1:3734014	-0.104	-0.088	-0.340	<0.001%
chr1_3739981_T_A	chr1:3739981	0.156	0.033	0.304	—
chr1_3739981_T_G	chr1:3739981	0.121	0.018	0.304	—
chr1_3739979_C_G	chr1:3739979	0.171	0.000	0.275	—
chr1_3727556_T_G	chr1:3727556	0.015	-0.082	-0.333	<0.001%
chr1_3733604_C_T	chr1:3733604	-0.102	-0.142	-0.333	0.0039%
chr1_3718189_C_T	chr1:3718189	-0.209	0.041	-0.059	<0.001%
chr1_3740014_A_G	chr1:3740014	0.148	0.086	0.295	—
chr1_3733197_A_G	chr1:3733197	0.084	0.195	0.327	<0.001%
chr1_3718133_C_A	chr1:3718133	0.203	-0.002	0.150	<0.001%
chr1_3739992_T_G	chr1:3739992	0.162	0.134	0.251	—
chr1_3727581_G_A	chr1:3727581	0.039	0.085	0.314	<0.001%
chr1_3733693_C_T	chr1:3733693	0.152	0.192	0.314	<0.001%
chr1_3739977_G_C	chr1:3739977	0.159	0.038	0.243	—
chr1_3739980_C_G	chr1:3739980	0.118	0.008	0.281	—
chr1_3740015_T_A	chr1:3740015	0.159	0.247	0.181	—
chr1_3733680_C_T	chr1:3733680	-0.156	-0.264	-0.307	0.098%
chr1_3739978_A_G	chr1:3739978	0.118	-0.003	0.272	—
chr1_3718326_A_C	chr1:3718326	0.191	0.016	0.092	<0.001%
chr1_3718277_C_G	chr1:3718277	-0.187	-0.006	-0.222	<0.001%
chr1_3734015_A_T	chr1:3734015	-0.075	-0.072	-0.294	0.0033%
chr1_3739980_C_T	chr1:3739980	0.147	0.030	0.263	—
chr1_3717456_C_T	chr1:3717456	0.108	0.050	0.291	0.011%
chr1_3739977_G_T	chr1:3739977	0.147	0.020	0.178	—
chr1_3733515_C_T	chr1:3733515	0.077	0.188	0.288	0.0046%
chr1_3733931_T_G	chr1:3733931	0.014	0.021	0.288	<0.001%
chr1_3739968_C_G	chr1:3739968	0.108	0.081	0.257	—
chr1_3740013_G_T	chr1:3740013	0.128	0.111	0.257	—
chr1_3740015_T_C	chr1:3740015	0.146	0.438	0.102	0.025%
chr1_3717473_A_G	chr1:3717473	0.079	0.034	0.284	<0.001%
chr1_3739951_T_G	chr1:3739951	0.118	0.076	0.254	—
chr1_3740015_T_G	chr1:3740015	0.144	0.086	0.254	—
chr1_3718247_C_G	chr1:3718247	0.175	0.017	0.281	<0.001%
chr1_3739988_A_T	chr1:3739988	0.132	0.060	0.249	—
chr1_3718194_G_A	chr1:3718194	0.057	0.014	0.275	<0.001%
chr1_3718220_G_A	chr1:3718220	0.076	0.031	0.275	<0.001%
chr1_3727384_C_A	chr1:3727384	-0.126	-0.059	-0.275	<0.001%
chr1_3718270_T_G	chr1:3718270	0.065	-0.012	0.268	<0.001%
chr1_3740014_A_T	chr1:3740014	0.113	0.050	0.240	—
chr1_3718216_C_A	chr1:3718216	-0.167	0.013	-0.190	<0.001%
chr1_3739979_C_T	chr1:3739979	0.117	-0.071	0.237	—
chr1_3718247_C_T	chr1:3718247	0.121	0.020	0.261	0.0033%
chr1_3718558_T_C	chr1:3718558	0.022	0.045	0.261	<0.001%
chr1_3733753_C_G	chr1:3733753	0.114	0.110	0.261	0.032%
chr1_3734007_G_A	chr1:3734007	0.049	0.005	0.261	0.0040%
chr1_3734013_C_A	chr1:3734013	-0.078	-0.056	-0.261	<0.001%
chr1_3739951_T_C	chr1:3739951	0.132	0.106	0.213	—
chr1_3740004_C_G	chr1:3740004	0.132	0.134	0.222	—
chr1_3718247_C_A	chr1:3718247	0.121	0.020	0.255	0.0013%
chr1_3727559_G_A	chr1:3727559	0.043	0.101	0.255	<0.001%
chr1_3739977_G_A	chr1:3739977	0.128	0.005	0.155	0.0093%
chr1_3727436_G_A	chr1:3727436	0.157	0.042	0.039	<0.001%
chr1_3727447_G_C	chr1:3727447	-0.139	-0.054	-0.248	0.0020%
chr1_3734022_C_T	chr1:3734022	-0.062	-0.022	-0.248	0.0020%
chr1_3717443_G_A	chr1:3717443	-0.073	-0.048	-0.245	<0.001%
chr1_3724586_C_T	chr1:3724586	-0.015	-0.054	-0.242	0.0020%
chr1_3733509_C_T	chr1:3733509	-0.058	-0.064	-0.242	0.0020%
chr1_3734023_G_A	chr1:3734023	-0.093	-0.013	-0.242	0.0020%
chr1_3718248_G_T	chr1:3718248	-0.152	-0.021	-0.235	0.0053%
chr1_3739950_C_G	chr1:3739950	0.104	0.136	0.213	0.0033%
chr1_3717346_C_T	chr1:3717346	0.056	0.028	0.235	0.0026%
chr1_3724580_C_T	chr1:3724580	-0.038	-0.032	-0.235	1.62%
chr1_3727480_C_T	chr1:3727480	0.119	0.034	0.235	0.0039%
chr1_3733559_A_C	chr1:3733559	0.088	0.120	0.235	<0.001%
chr1_3733662_C_T	chr1:3733662	-0.128	-0.185	-0.235	<0.001%
chr1_3740013_G_C	chr1:3740013	0.084	0.060	0.211	—
chr1_3733753_C_A	chr1:3733753	0.147	0.142	0.222	1.68%
chr1_3740014_A_C	chr1:3740014	0.093	0.030	0.208	—
chr1_3739984_A_C	chr1:3739984	0.117	0.126	0.143	—
chr1_3739956_C_G	chr1:3739956	0.103	0.123	0.203	—
chr1_3739976_C_A	chr1:3739976	0.115	-0.033	0.187	—
chr1_3733670_T_C	chr1:3733670	-0.007	0.067	0.222	<0.001%
chr1_3733744_G_A	chr1:3733744	0.120	0.142	0.222	0.013%
chr1_3733758_G_A	chr1:3733758	-0.054	-0.069	-0.222	<0.001%
chr1_3739950_C_A	chr1:3739950	0.102	0.050	0.199	—
chr1_3739967_C_G	chr1:3739967	0.113	0.076	0.190	—
chr1_3739990_C_A	chr1:3739990	0.112	0.116	0.108	—
chr1_3740001_A_G	chr1:3740001	0.112	0.217	0.164	—
chr1_3718134_A_G	chr1:3718134	0.136	-0.003	0.124	0.0026%
chr1_3733451_C_T	chr1:3733451	-0.088	-0.069	-0.216	0.0013%
chr1_3733563_A_C	chr1:3733563	-0.031	-0.053	-0.216	0.019%
chr1_3734049_G_C	chr1:3734049	0.090	0.086	0.216	0.0013%
chr1_3740003_C_T	chr1:3740003	0.099	0.136	0.193	—
chr1_3739989_A_T	chr1:3739989	0.108	0.091	0.137	—
chr1_3733312_C_A	chr1:3733312	-0.058	-0.050	-0.209	<0.001%
chr1_3733772_G_A	chr1:3733772	-0.065	-0.069	-0.209	<0.001%
chr1_3734054_G_A	chr1:3734054	-0.034	-0.042	-0.209	<0.001%
chr1_3739983_T_G	chr1:3739983	0.062	-0.005	0.184	—
chr1_3733578_G_T	chr1:3733578	-0.088	-0.094	-0.203	<0.001%
chr1_3733606_C_T	chr1:3733606	-0.072	-0.097	-0.203	0.0033%
chr1_3733695_C_T	chr1:3733695	0.107	0.184	0.203	<0.001%
chr1_3734050_G_C	chr1:3734050	0.044	0.043	0.203	0.0013%
chr1_3740003_C_A	chr1:3740003	0.103	0.096	0.140	—
chr1_3717468_C_G	chr1:3717468	0.005	0.017	0.199	<0.001%
chr1_3739961_A_G	chr1:3739961	0.089	0.060	0.178	—
chr1_3739995_A_G	chr1:3739995	0.100	0.161	0.088	—
chr1_3733399_G_A	chr1:3733399	-0.054	-0.040	-0.196	0.068%
chr1_3733711_G_T	chr1:3733711	-0.088	-0.029	-0.196	0.0020%
chr1_3739949_T_G	chr1:3739949	0.057	0.076	0.175	—
chr1_3739963_T_G	chr1:3739963	0.094	0.091	0.173	—
chr1_3740012_T_C	chr1:3740012	0.071	0.040	0.173	—
chr1_3739984_A_T	chr1:3739984	0.097	0.088	0.135	—
chr1_3727465_T_G	chr1:3727465	-0.087	-0.048	-0.190	<0.001%
chr1_3733830_C_G	chr1:3733830	0.077	0.050	0.190	<0.001%
chr1_3739978_A_T	chr1:3739978	0.074	-0.003	0.170	—
chr1_3739979_C_A	chr1:3739979	0.094	0.005	0.167	<0.001%
chr1_3739986_C_A	chr1:3739986	0.094	0.086	0.149	—
chr1_3739994_T_C	chr1:3739994	0.094	0.076	0.132	—
chr1_3739983_T_C	chr1:3739983	0.094	0.045	0.164	—
chr1_3717459_G_T	chr1:3717459	-0.026	0.011	-0.183	0.0013%
chr1_3718154_C_A	chr1:3718154	0.112	0.005	0.183	0.014%
chr1_3724601_G_A	chr1:3724601	-0.069	-0.022	-0.183	<0.001%
chr1_3727413_G_A	chr1:3727413	0.078	0.053	0.183	0.0033%
chr1_3733709_C_T	chr1:3733709	-0.069	-0.118	-0.183	0.0013%
chr1_3733752_C_T	chr1:3733752	0.069	0.070	0.183	2.63%
chr1_3739963_T_A	chr1:3739963	0.093	0.212	0.094	—
chr1_3739982_C_A	chr1:3739982	0.093	-0.030	0.164	—
chr1_3739976_C_G	chr1:3739976	0.083	-0.071	0.161	—
chr1_3718222_G_A	chr1:3718222	0.060	0.002	0.176	0.0013%
chr1_3733945_T_A	chr1:3733945	0.040	0.073	0.176	<0.001%
chr1_3739988_A_G	chr1:3739988	0.089	0.259	0.091	—
chr1_3739953_A_G	chr1:3739953	0.089	0.048	0.155	—
chr1_3739989_A_G	chr1:3739989	0.089	0.106	0.146	—
chr1_3717512_A_G	chr1:3717512	0.074	0.053	0.173	<0.001%
chr1_3733743_C_A	chr1:3733743	0.109	0.179	0.131	<0.001%
chr1_3739980_C_A	chr1:3739980	0.085	0.101	0.155	—
chr1_3739987_T_A	chr1:3739987	0.082	-0.065	0.155	—
chr1_3740016_C_T	chr1:3740016	0.088	0.096	0.117	—
chr1_3718141_G_T	chr1:3718141	-0.108	-0.006	-0.092	<0.001%
chr1_3717549_G_C	chr1:3717549	0.047	-0.001	0.170	<0.001%
chr1_3717923_T_C	chr1:3717923	0.041	0.012	0.170	0.675%
chr1_3718143_G_A	chr1:3718143	0.107	0.004	0.118	0.027%
chr1_3727491_G_A	chr1:3727491	-0.097	-0.040	-0.170	0.0020%
chr1_3733049_G_A	chr1:3733049	0.006	0.062	0.170	<0.001%
chr1_3733336_C_T	chr1:3733336	-0.002	-0.006	-0.170	<0.001%
chr1_3733543_C_T	chr1:3733543	-0.070	-0.070	-0.170	<0.001%
chr1_3733569_G_A	chr1:3733569	-0.081	-0.128	-0.170	<0.001%
chr1_3733758_G_T	chr1:3733758	-0.035	-0.056	-0.170	<0.001%
chr1_3739954_C_G	chr1:3739954	0.057	-0.003	0.152	—
chr1_3739987_T_C	chr1:3739987	0.071	0.000	0.152	—
chr1_3739988_A_C	chr1:3739988	0.066	0.015	0.152	—
chr1_3739991_C_T	chr1:3739991	0.086	0.005	0.123	—
chr1_3739991_C_G	chr1:3739991	0.054	-0.086	0.149	—
chr1_3718211_C_T	chr1:3718211	-0.046	-0.020	-0.163	<0.001%
chr1_3718239_G_A	chr1:3718239	0.006	0.002	0.163	0.0013%
chr1_3724498_T_C	chr1:3724498	0.016	0.028	0.163	<0.001%
chr1_3739965_A_G	chr1:3739965	0.037	0.156	0.146	—
chr1_3740003_C_G	chr1:3740003	0.082	0.055	0.143	—
chr1_3740004_C_A	chr1:3740004	0.082	0.179	0.076	—
chr1_3717347_G_A	chr1:3717347	0.033	0.024	0.160	0.0026%
chr1_3717491_G_A	chr1:3717491	-0.045	-0.012	-0.160	0.0026%
chr1_3739993_G_T	chr1:3739993	0.027	0.247	-0.053	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.