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CHRNA2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CHRNA2
chr8:27,359,755..27,579,261, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr8_27362062_C_A | chr8:27362062 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362094_C_A | chr8:27362094 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362082_G_T | chr8:27362082 | 1.000 | 1.000 | 1.000 | — |
| chr8_27361983_T_A | chr8:27361983 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr8_27362155_C_T | chr8:27362155 | 1.000 | 1.000 | 0.935 | <0.001% |
| chr8_27362197_A_G | chr8:27362197 | 1.000 | 1.000 | 0.987 | — |
| chr8_27362062_C_G | chr8:27362062 | 1.000 | 1.000 | 1.000 | — |
| chr8_27361982_G_A | chr8:27361982 | -1.000 | -1.000 | -1.000 | 0.0013% |
| chr8_27362083_G_T | chr8:27362083 | 1.000 | 1.000 | 0.824 | — |
| chr8_27362049_G_T | chr8:27362049 | 1.000 | 1.000 | 0.928 | — |
| chr8_27362153_T_G | chr8:27362153 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362099_C_A | chr8:27362099 | -1.000 | -1.000 | -0.458 | — |
| chr8_27362095_T_G | chr8:27362095 | -1.000 | -1.000 | -0.810 | — |
| chr8_27362149_A_C | chr8:27362149 | 1.000 | 1.000 | 0.967 | — |
| chr8_27362075_C_A | chr8:27362075 | -1.000 | -1.000 | -0.993 | — |
| chr8_27362047_G_C | chr8:27362047 | -1.000 | -1.000 | -0.824 | — |
| chr8_27362147_T_G | chr8:27362147 | 1.000 | 0.962 | 1.000 | — |
| chr8_27362105_G_T | chr8:27362105 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362142_T_A | chr8:27362142 | 1.000 | 0.971 | 0.745 | — |
| chr8_27362134_C_A | chr8:27362134 | 1.000 | 0.920 | 0.837 | — |
| chr8_27362079_T_G | chr8:27362079 | -1.000 | -0.776 | -0.863 | — |
| chr8_27362050_C_G | chr8:27362050 | -1.000 | -1.000 | -1.000 | — |
| chr8_27362102_T_G | chr8:27362102 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362096_G_C | chr8:27362096 | -1.000 | -1.000 | -1.000 | — |
| chr8_27362053_G_A | chr8:27362053 | -1.000 | -1.000 | -1.000 | — |
| chr8_27362083_G_A | chr8:27362083 | -1.000 | -0.952 | -0.980 | — |
| chr8_27362095_T_A | chr8:27362095 | -1.000 | -1.000 | -0.863 | — |
| chr8_27362061_T_G | chr8:27362061 | 1.000 | 1.000 | 0.784 | — |
| chr8_27361992_G_A | chr8:27361992 | -1.000 | -1.000 | -0.876 | 0.0033% |
| chr8_27362053_G_C | chr8:27362053 | -1.000 | -1.000 | -0.980 | — |
| chr8_27362080_A_C | chr8:27362080 | -1.000 | -1.000 | -0.928 | — |
| chr8_27362114_T_G | chr8:27362114 | 1.000 | 1.000 | 0.863 | — |
| chr8_27362129_C_G | chr8:27362129 | -1.000 | -1.000 | -1.000 | — |
| chr8_27362079_T_A | chr8:27362079 | -1.000 | -0.875 | -0.758 | — |
| chr8_27362096_G_T | chr8:27362096 | -1.000 | -1.000 | -1.000 | — |
| chr8_27362050_C_T | chr8:27362050 | -1.000 | -1.000 | -0.961 | — |
| chr8_27362131_G_A | chr8:27362131 | -1.000 | -0.920 | -0.980 | — |
| chr8_27362067_G_T | chr8:27362067 | 1.000 | 1.000 | 0.810 | — |
| chr8_27362141_C_A | chr8:27362141 | -1.000 | -0.978 | -1.000 | — |
| chr8_27362101_G_T | chr8:27362101 | 1.000 | 1.000 | 0.980 | <0.001% |
| chr8_27362050_C_A | chr8:27362050 | -1.000 | -1.000 | -0.817 | — |
| chr8_27362132_G_C | chr8:27362132 | -1.000 | -0.911 | -0.961 | — |
| chr8_27362131_G_C | chr8:27362131 | -1.000 | -0.789 | -0.889 | — |
| chr8_27362097_A_T | chr8:27362097 | -1.000 | -1.000 | -0.699 | — |
| chr8_27362167_A_G | chr8:27362167 | 1.000 | 0.700 | 0.902 | — |
| chr8_27362047_G_T | chr8:27362047 | -1.000 | -0.885 | -0.627 | — |
| chr8_27362099_C_G | chr8:27362099 | -1.000 | -0.946 | 0.222 | — |
| chr8_27362175_G_T | chr8:27362175 | -1.000 | -0.962 | -0.712 | — |
| chr8_27362169_C_G | chr8:27362169 | 1.000 | 0.978 | 0.758 | — |
| chr8_27362150_T_A | chr8:27362150 | 1.000 | 0.696 | 0.575 | — |
| chr8_27362250_C_A | chr8:27362250 | 1.000 | 0.099 | 0.065 | — |
| chr8_27362068_G_C | chr8:27362068 | -1.000 | -0.834 | -0.908 | — |
| chr8_27362163_G_T | chr8:27362163 | 1.000 | 1.000 | 1.000 | — |
| chr8_27362160_C_T | chr8:27362160 | -1.000 | -0.676 | -0.346 | — |
| chr8_27362069_A_C | chr8:27362069 | 1.000 | 0.879 | 0.784 | — |
| chr8_27362142_T_C | chr8:27362142 | -1.000 | -0.789 | -0.614 | — |
| chr8_27362097_A_G | chr8:27362097 | -1.000 | -1.000 | -0.588 | — |
| chr8_27362099_C_T | chr8:27362099 | -1.000 | -0.997 | -0.209 | 0.0020% |
| chr8_27362269_C_G | chr8:27362269 | -1.000 | -1.000 | 0.098 | — |
| chr8_27362048_G_C | chr8:27362048 | -1.000 | -0.933 | -0.654 | — |
| chr8_27362147_T_C | chr8:27362147 | -1.000 | -0.856 | -0.484 | — |
| chr8_27362057_T_C | chr8:27362057 | -1.000 | -0.853 | -0.693 | — |
| chr8_27362111_G_T | chr8:27362111 | 1.000 | 1.000 | 0.562 | — |
| chr8_27362193_G_C | chr8:27362193 | 1.000 | 1.000 | 0.627 | — |
| chr8_27362133_C_T | chr8:27362133 | -1.000 | -0.831 | -0.824 | — |
| chr8_27362181_A_G | chr8:27362181 | 1.000 | 0.821 | 0.373 | — |
| chr8_27362086_A_C | chr8:27362086 | -1.000 | -0.751 | -0.654 | — |
| chr8_27362126_G_T | chr8:27362126 | -1.000 | -0.834 | -0.608 | — |
| chr8_27362159_C_T | chr8:27362159 | -1.000 | -0.927 | -0.569 | — |
| chr8_27362092_C_G | chr8:27362092 | -1.000 | -0.962 | -0.706 | — |
| chr8_27362075_C_G | chr8:27362075 | -1.000 | -0.610 | -0.418 | — |
| chr8_27362028_C_A | chr8:27362028 | -1.000 | -0.760 | -0.641 | 0.0066% |
| chr8_27362075_C_T | chr8:27362075 | -1.000 | -0.658 | -0.614 | — |
| chr8_27362123_C_A | chr8:27362123 | -1.000 | -0.652 | -0.627 | — |
| chr8_27362184_G_T | chr8:27362184 | -0.994 | -0.784 | -0.739 | — |
| chr8_27362269_C_T | chr8:27362269 | -0.988 | -1.000 | -0.601 | — |
| chr8_27362183_G_C | chr8:27362183 | -0.986 | -0.645 | -0.405 | — |
| chr8_27362156_T_A | chr8:27362156 | -0.984 | -0.885 | -0.595 | — |
| chr8_27362055_C_T | chr8:27362055 | 0.981 | 0.786 | 0.444 | — |
| chr8_27362097_A_C | chr8:27362097 | -0.981 | -0.936 | -0.288 | — |
| chr8_27362046_A_T | chr8:27362046 | -0.973 | -0.872 | -0.627 | — |
| chr8_27362055_C_A | chr8:27362055 | 0.969 | 0.754 | 0.510 | — |
| chr8_27362269_C_A | chr8:27362269 | -0.965 | -1.000 | -0.863 | — |
| chr8_27362159_C_A | chr8:27362159 | -0.948 | -0.796 | -0.588 | — |
| chr8_27362138_A_T | chr8:27362138 | 0.938 | 0.534 | 0.706 | — |
| chr8_27362182_G_A | chr8:27362182 | -0.938 | -0.748 | -0.510 | — |
| chr8_27362060_T_A | chr8:27362060 | -0.932 | -0.770 | -0.719 | — |
| chr8_27362054_C_A | chr8:27362054 | 0.928 | 0.725 | 0.170 | — |
| chr8_27362103_C_G | chr8:27362103 | 0.924 | 0.952 | 0.510 | <0.001% |
| chr8_27362268_C_G | chr8:27362268 | -0.920 | -0.890 | -0.569 | — |
| chr8_27362123_C_T | chr8:27362123 | -0.915 | -0.613 | -0.523 | — |
| chr8_27362089_A_C | chr8:27362089 | -0.911 | -0.748 | -0.647 | — |
| chr8_27362131_G_T | chr8:27362131 | -0.911 | -0.422 | -0.739 | — |
| chr8_27362158_A_C | chr8:27362158 | -0.909 | -0.859 | -0.562 | — |
| chr8_27362180_C_T | chr8:27362180 | -0.907 | -0.703 | -0.601 | — |
| chr8_27362079_T_C | chr8:27362079 | -0.899 | -0.374 | -0.392 | 0.0020% |
| chr8_27362182_G_C | chr8:27362182 | -0.889 | -0.633 | -0.373 | — |
| chr8_27362113_C_G | chr8:27362113 | 0.887 | 0.821 | 0.660 | — |
| chr8_27362175_G_C | chr8:27362175 | -0.885 | -0.681 | -0.523 | — |
| chr8_27362158_A_T | chr8:27362158 | -0.882 | -0.895 | -0.549 | — |
| chr8_27362048_G_T | chr8:27362048 | -0.878 | -0.792 | -0.667 | — |
| chr8_27362130_T_C | chr8:27362130 | -0.872 | -0.585 | -0.575 | — |
| chr8_27362060_T_G | chr8:27362060 | 0.866 | 0.620 | 0.392 | — |
| chr8_27362102_T_A | chr8:27362102 | 0.866 | 0.677 | 0.810 | — |
| chr8_27362145_T_G | chr8:27362145 | 0.864 | 1.000 | 0.490 | — |
| chr8_27362107_G_C | chr8:27362107 | 0.862 | 0.649 | 0.693 | — |
| chr8_27362179_G_A | chr8:27362179 | -0.860 | -0.677 | -0.373 | — |
| chr8_27362059_T_A | chr8:27362059 | -0.858 | -0.668 | -0.549 | — |
| chr8_27362123_C_G | chr8:27362123 | -0.858 | -0.527 | -0.510 | — |
| chr8_27362129_C_A | chr8:27362129 | -0.852 | -0.565 | -0.902 | — |
| chr8_27362076_T_C | chr8:27362076 | -0.849 | -0.492 | -0.458 | — |
| chr8_27362074_C_A | chr8:27362074 | -0.841 | -0.716 | -0.451 | — |
| chr8_27362156_T_G | chr8:27362156 | -0.841 | -0.799 | -0.412 | — |
| chr8_27362080_A_T | chr8:27362080 | -0.833 | -0.696 | -0.739 | — |
| chr8_27362126_G_C | chr8:27362126 | -0.833 | -0.613 | -0.405 | — |
| chr8_27362110_G_T | chr8:27362110 | -0.829 | -0.786 | 0.288 | — |
| chr8_27362287_T_C | chr8:27362287 | 0.816 | 0.367 | -0.013 | — |
| chr8_27362140_C_G | chr8:27362140 | -0.814 | -0.457 | -0.686 | — |
| chr8_27361970_A_G | chr8:27361970 | 0.812 | 0.700 | 0.693 | 0.0059% |
| chr8_27362048_G_A | chr8:27362048 | -0.812 | -0.696 | -0.503 | — |
| chr8_27362082_G_C | chr8:27362082 | -0.804 | -0.562 | -0.686 | — |
| chr8_27362085_C_G | chr8:27362085 | -0.804 | -0.700 | -0.562 | — |
| chr8_27362135_C_T | chr8:27362135 | 0.800 | 0.687 | 0.353 | — |
| chr8_27362143_C_G | chr8:27362143 | 0.800 | 0.351 | 0.536 | — |
| chr8_27362132_G_T | chr8:27362132 | -0.798 | -0.565 | -0.601 | — |
| chr8_27362052_G_C | chr8:27362052 | -0.784 | -0.677 | -0.497 | — |
| chr8_27362183_G_T | chr8:27362183 | -0.784 | -0.626 | -0.366 | — |
| chr8_27362157_G_C | chr8:27362157 | -0.781 | -0.783 | -0.477 | — |
| chr8_27362169_C_A | chr8:27362169 | 0.779 | 0.553 | 0.614 | — |
| chr8_27362170_A_G | chr8:27362170 | 0.779 | 0.776 | 0.725 | — |
| chr8_27362178_G_T | chr8:27362178 | -0.777 | -0.728 | -0.595 | — |
| chr8_27362129_C_T | chr8:27362129 | 0.775 | 0.559 | 0.392 | — |
| chr8_27362144_C_G | chr8:27362144 | 0.775 | 0.626 | 0.621 | 0.0039% |
| chr8_27362179_G_T | chr8:27362179 | -0.775 | -0.623 | -0.379 | — |
| chr8_27362140_C_A | chr8:27362140 | -0.771 | -0.479 | -0.516 | — |
| chr8_27362032_G_A | chr8:27362032 | 0.767 | 0.518 | 0.392 | <0.001% |
| chr8_27361951_T_G | chr8:27361951 | -0.763 | -0.425 | -0.601 | 0.0026% |
| chr8_27362157_G_A | chr8:27362157 | -0.761 | -0.818 | -0.556 | — |
| chr8_27362065_T_C | chr8:27362065 | -0.759 | -0.636 | -0.471 | — |
| chr8_27362165_T_C | chr8:27362165 | -0.759 | -0.661 | -0.477 | — |
| chr8_27362072_T_A | chr8:27362072 | -0.755 | -0.559 | -0.471 | — |
| chr8_27362095_T_C | chr8:27362095 | -0.755 | -0.716 | -0.379 | — |
| chr8_27362162_A_C | chr8:27362162 | -0.751 | -0.521 | -0.529 | — |
| chr8_27362182_G_T | chr8:27362182 | -0.751 | -0.655 | -0.431 | — |
| chr8_27362088_A_T | chr8:27362088 | -0.742 | -0.591 | -0.458 | — |
| chr8_27362111_G_A | chr8:27362111 | 0.742 | 0.719 | 0.314 | — |
| chr8_27362171_T_C | chr8:27362171 | 0.738 | 0.636 | 0.183 | — |
| chr8_27362159_C_G | chr8:27362159 | -0.736 | -0.655 | -0.131 | — |
| chr8_27361968_C_T | chr8:27361968 | -0.730 | -0.556 | -0.431 | 0.0013% |
| chr8_27362069_A_G | chr8:27362069 | -0.730 | -0.546 | -0.497 | — |
| chr8_27362103_C_T | chr8:27362103 | 0.730 | 0.476 | 0.288 | — |
| chr8_27362157_G_T | chr8:27362157 | -0.728 | -0.655 | -0.438 | — |
| chr8_27362089_A_T | chr8:27362089 | -0.726 | -0.636 | -0.542 | — |
| chr8_27362139_G_C | chr8:27362139 | 0.726 | 0.965 | 0.235 | — |
| chr8_27362156_T_C | chr8:27362156 | -0.726 | -0.693 | -0.444 | — |
| chr8_27362133_C_G | chr8:27362133 | -0.720 | -0.527 | -0.510 | <0.001% |
| chr8_27362118_C_G | chr8:27362118 | 0.718 | 0.668 | 0.444 | — |
| chr8_27362183_G_A | chr8:27362183 | -0.715 | -0.505 | -0.281 | — |
| chr8_27361973_T_C | chr8:27361973 | -0.713 | -0.540 | -0.366 | 0.0039% |
| chr8_27362082_G_A | chr8:27362082 | -0.713 | -0.521 | -0.549 | — |
| chr8_27362047_G_A | chr8:27362047 | -0.709 | -0.479 | -0.235 | — |
| chr8_27362098_C_G | chr8:27362098 | -0.709 | -0.773 | -0.235 | — |
| chr8_27362204_G_C | chr8:27362204 | -0.709 | -0.516 | -0.477 | — |
| chr8_27362150_T_G | chr8:27362150 | 0.705 | 0.377 | 0.353 | — |
| chr8_27362070_T_G | chr8:27362070 | 0.701 | 0.591 | 0.405 | — |
| chr8_27362111_G_C | chr8:27362111 | 0.701 | 0.741 | 0.444 | — |
| chr8_27362078_T_A | chr8:27362078 | 0.697 | 0.300 | 0.366 | — |
| chr8_27362083_G_C | chr8:27362083 | -0.697 | -0.217 | -0.614 | — |
| chr8_27362154_G_T | chr8:27362154 | -0.695 | -0.728 | -0.601 | — |
| chr8_27362055_C_G | chr8:27362055 | 0.693 | 0.550 | 0.379 | — |
| chr8_27361869_G_A | chr8:27361869 | -0.682 | 0.559 | 0.353 | <0.001% |
| chr8_27362266_G_C | chr8:27362266 | -0.322 | -0.296 | -1.000 | — |
| chr8_27362070_T_A | chr8:27362070 | 0.672 | 0.655 | 0.562 | — |
| chr8_27362143_C_A | chr8:27362143 | 0.672 | 0.243 | 0.379 | — |
| chr8_27362177_A_G | chr8:27362177 | 0.668 | 0.575 | 0.209 | — |
| chr8_27362297_T_A | chr8:27362297 | -0.303 | -0.003 | -1.000 | — |
| chr8_27362158_A_G | chr8:27362158 | -0.664 | -0.767 | -0.320 | — |
| chr8_27362184_G_A | chr8:27362184 | -0.664 | -0.553 | -0.373 | — |
| chr8_27362195_A_T | chr8:27362195 | 0.660 | 0.335 | 0.033 | — |
| chr8_27362112_C_G | chr8:27362112 | 0.656 | 0.649 | 0.418 | — |
| chr8_27362052_G_T | chr8:27362052 | 0.652 | 0.565 | 0.170 | — |
| chr8_27362101_G_A | chr8:27362101 | 0.652 | 0.272 | 0.549 | 0.0092% |
| chr8_27362130_T_G | chr8:27362130 | -0.649 | -0.345 | -0.484 | — |
| chr8_27362162_A_T | chr8:27362162 | -0.643 | -0.495 | -0.444 | — |
| chr8_27362298_G_A | chr8:27362298 | -0.515 | -0.192 | -1.000 | 0.0033% |
| chr8_27362268_C_T | chr8:27362268 | -0.641 | -0.679 | -0.529 | — |
| chr8_27362057_T_A | chr8:27362057 | -0.639 | -0.556 | -0.412 | — |
| chr8_27362061_T_A | chr8:27362061 | 0.639 | 0.687 | 0.183 | — |
| chr8_27362098_C_A | chr8:27362098 | -0.639 | -0.684 | -0.190 | — |
| chr8_27362141_C_T | chr8:27362141 | -0.639 | -0.157 | -0.268 | — |
| chr8_27362266_G_T | chr8:27362266 | -0.396 | -0.342 | -1.000 | — |
| chr8_27362046_A_G | chr8:27362046 | -0.635 | -0.460 | -0.418 | — |
| chr8_27362303_A_T | chr8:27362303 | -0.400 | -0.145 | -1.000 | — |
| chr8_27362267_A_T | chr8:27362267 | -0.633 | -0.792 | -0.392 | — |
| chr8_27362177_A_T | chr8:27362177 | -0.629 | -0.516 | -0.248 | — |
| chr8_27361897_C_T | chr8:27361897 | -0.627 | -0.476 | -0.418 | 0.0026% |
| chr8_27362058_G_A | chr8:27362058 | -0.623 | -0.508 | -0.471 | — |
| chr8_27362087_C_A | chr8:27362087 | -0.623 | -0.524 | -0.366 | — |
| chr8_27362091_T_A | chr8:27362091 | -0.619 | -0.431 | -0.248 | — |
| chr8_27362098_C_T | chr8:27362098 | -0.619 | -0.668 | -0.392 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.