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CIAO2A
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CIAO2A
chr15:63,972,558..64,194,008, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_64004857_T_C | chr15:64004857 | -0.773 | -0.978 | -0.882 | 0.0013% |
| chr15_64004797_C_A | chr15:64004797 | -0.687 | -0.550 | -0.569 | 0.0020% |
| chr15_64017216_T_C | chr15:64017216 | -0.623 | -0.254 | -0.908 | <0.001% |
| chr15_64017217_T_A | chr15:64017217 | -0.606 | -0.259 | -0.974 | <0.001% |
| chr15_64017250_G_A | chr15:64017250 | -0.600 | -0.173 | -0.902 | 0.0013% |
| chr15_64019796_G_A | chr15:64019796 | 0.443 | 0.146 | -0.149 | — |
| chr15_64000396_C_T | chr15:64000396 | 0.513 | 0.366 | 0.234 | <0.001% |
| chr15_64019785_A_G | chr15:64019785 | -0.403 | -0.325 | -0.438 | — |
| chr15_64000377_C_G | chr15:64000377 | -0.495 | -0.355 | -0.489 | <0.001% |
| chr15_64004916_G_A | chr15:64004916 | 0.452 | 0.272 | 0.196 | 0.0033% |
| chr15_64004824_C_T | chr15:64004824 | -0.167 | -0.374 | -0.686 | 0.0013% |
| chr15_64004905_T_G | chr15:64004905 | 0.429 | 0.358 | 0.248 | 0.0020% |
| chr15_64017248_G_T | chr15:64017248 | -0.414 | -0.113 | -0.634 | <0.001% |
| chr15_64004851_G_T | chr15:64004851 | -0.410 | -0.732 | -0.275 | <0.001% |
| chr15_63998625_A_G | chr15:63998625 | -0.400 | -0.283 | -0.379 | <0.001% |
| chr15_64019799_T_A | chr15:64019799 | 0.302 | 0.234 | 0.230 | — |
| chr15_64000410_C_T | chr15:64000410 | 0.375 | 0.347 | 0.417 | 0.0079% |
| chr15_64000352_A_T | chr15:64000352 | -0.363 | -0.203 | -0.397 | <0.001% |
| chr15_64017281_C_G | chr15:64017281 | 0.272 | 0.101 | 0.575 | 0.040% |
| chr15_64019798_C_A | chr15:64019798 | -0.285 | -0.202 | -0.191 | — |
| chr15_64004737_C_T | chr15:64004737 | 0.353 | 0.403 | 0.176 | <0.001% |
| chr15_64004856_C_T | chr15:64004856 | 0.336 | 0.687 | 0.255 | <0.001% |
| chr15_64019783_G_T | chr15:64019783 | -0.266 | -0.191 | -0.225 | — |
| chr15_64019771_T_A | chr15:64019771 | 0.264 | 0.166 | 0.051 | — |
| chr15_64004901_T_C | chr15:64004901 | -0.328 | -0.185 | -0.183 | 4.09% |
| chr15_64017238_A_G | chr15:64017238 | 0.229 | 0.105 | 0.516 | <0.001% |
| chr15_64004675_A_G | chr15:64004675 | 0.324 | 0.230 | 0.327 | 0.0026% |
| chr15_64019793_C_A | chr15:64019793 | -0.257 | -0.270 | -0.225 | — |
| chr15_64017272_A_G | chr15:64017272 | 0.223 | 0.037 | 0.503 | <0.001% |
| chr15_64004915_C_T | chr15:64004915 | -0.315 | 0.013 | -0.176 | 0.0013% |
| chr15_64000354_T_A | chr15:64000354 | -0.309 | -0.160 | -0.299 | 0.0013% |
| chr15_64004713_C_T | chr15:64004713 | -0.293 | -0.316 | -0.451 | <0.001% |
| chr15_64019768_C_A | chr15:64019768 | -0.228 | -0.161 | -0.171 | — |
| chr15_64019783_G_C | chr15:64019783 | -0.228 | -0.126 | -0.225 | — |
| chr15_64000323_G_T | chr15:64000323 | 0.280 | 0.220 | 0.219 | 0.011% |
| chr15_64019795_T_G | chr15:64019795 | 0.220 | 0.224 | 0.270 | — |
| chr15_63998754_C_T | chr15:63998754 | 0.179 | 0.155 | 0.431 | <0.001% |
| chr15_64000392_C_T | chr15:64000392 | -0.270 | -0.188 | -0.222 | 0.0013% |
| chr15_64004882_C_T | chr15:64004882 | -0.268 | -0.147 | -0.425 | 0.011% |
| chr15_64000390_C_T | chr15:64000390 | -0.266 | -0.157 | -0.232 | 0.0020% |
| chr15_64019767_G_C | chr15:64019767 | -0.211 | -0.128 | -0.295 | — |
| chr15_64017290_A_G | chr15:64017290 | 0.264 | 0.133 | 0.314 | <0.001% |
| chr15_64019750_G_A | chr15:64019750 | -0.203 | -0.118 | -0.146 | — |
| chr15_64019795_T_A | chr15:64019795 | 0.197 | 0.111 | 0.096 | — |
| chr15_64019768_C_G | chr15:64019768 | -0.192 | -0.103 | -0.177 | — |
| chr15_63998305_T_C | chr15:63998305 | 0.070 | 0.070 | 0.379 | 0.0013% |
| chr15_64017262_C_T | chr15:64017262 | -0.239 | -0.096 | -0.320 | 0.0013% |
| chr15_64019784_G_T | chr15:64019784 | -0.189 | -0.101 | -0.236 | — |
| chr15_63998688_C_T | chr15:63998688 | -0.235 | -0.142 | 0.072 | 0.0033% |
| chr15_64000367_C_A | chr15:64000367 | -0.235 | -0.118 | -0.261 | <0.001% |
| chr15_64019767_G_T | chr15:64019767 | -0.187 | -0.149 | -0.258 | — |
| chr15_64019797_T_G | chr15:64019797 | 0.185 | 0.065 | 0.169 | — |
| chr15_64019790_T_G | chr15:64019790 | 0.184 | 0.081 | 0.067 | — |
| chr15_64019781_A_C | chr15:64019781 | 0.182 | 0.134 | 0.073 | — |
| chr15_64019770_G_T | chr15:64019770 | -0.180 | -0.081 | -0.180 | — |
| chr15_64019801_G_T | chr15:64019801 | 0.177 | 0.164 | 0.107 | — |
| chr15_64004865_C_A | chr15:64004865 | -0.221 | -0.166 | -0.229 | <0.001% |
| chr15_64019784_G_C | chr15:64019784 | -0.175 | -0.083 | -0.213 | — |
| chr15_64004813_T_C | chr15:64004813 | 0.219 | 0.383 | 0.092 | 0.107% |
| chr15_64019800_T_A | chr15:64019800 | 0.169 | 0.108 | 0.059 | — |
| chr15_63998678_A_T | chr15:63998678 | -0.210 | -0.109 | 0.033 | <0.001% |
| chr15_64019783_G_A | chr15:64019783 | -0.167 | -0.103 | -0.191 | 0.014% |
| chr15_64019796_G_C | chr15:64019796 | -0.167 | -0.139 | -0.129 | — |
| chr15_64000345_C_T | chr15:64000345 | -0.208 | -0.126 | -0.194 | <0.001% |
| chr15_64019763_A_T | chr15:64019763 | 0.166 | 0.058 | 0.107 | — |
| chr15_63998653_C_A | chr15:63998653 | -0.206 | -0.157 | -0.261 | 0.0059% |
| chr15_64019784_G_A | chr15:64019784 | -0.162 | -0.113 | -0.174 | — |
| chr15_63998304_A_G | chr15:63998304 | 0.142 | 0.061 | 0.320 | <0.001% |
| chr15_64000343_C_A | chr15:64000343 | -0.202 | -0.112 | -0.185 | <0.001% |
| chr15_64004737_C_G | chr15:64004737 | -0.194 | -0.176 | -0.320 | 0.052% |
| chr15_64019789_C_G | chr15:64019789 | -0.159 | -0.134 | -0.135 | — |
| chr15_64019796_G_T | chr15:64019796 | -0.157 | -0.111 | -0.090 | 0.0026% |
| chr15_64019785_A_T | chr15:64019785 | -0.156 | -0.068 | -0.197 | — |
| chr15_64004653_G_T | chr15:64004653 | 0.136 | 0.256 | 0.307 | <0.001% |
| chr15_64017321_C_T | chr15:64017321 | 0.194 | 0.134 | 0.144 | <0.001% |
| chr15_64019767_G_A | chr15:64019767 | -0.152 | -0.091 | -0.174 | — |
| chr15_64004655_G_T | chr15:64004655 | 0.122 | 0.157 | 0.301 | 0.0059% |
| chr15_64019734_A_G | chr15:64019734 | 0.181 | 0.147 | 0.301 | <0.001% |
| chr15_64004796_C_A | chr15:64004796 | 0.188 | 0.121 | 0.163 | 0.0013% |
| chr15_64019774_A_T | chr15:64019774 | 0.148 | 0.128 | 0.129 | — |
| chr15_64019776_T_C | chr15:64019776 | 0.143 | 0.131 | 0.138 | — |
| chr15_64019794_T_G | chr15:64019794 | 0.143 | 0.189 | 0.213 | — |
| chr15_64019770_G_C | chr15:64019770 | -0.139 | -0.111 | -0.191 | — |
| chr15_63998669_C_G | chr15:63998669 | 0.047 | 0.059 | -0.275 | <0.001% |
| chr15_64004853_T_C | chr15:64004853 | 0.173 | 0.281 | 0.190 | 0.0013% |
| chr15_64019781_A_T | chr15:64019781 | 0.138 | 0.086 | 0.090 | — |
| chr15_64000357_G_A | chr15:64000357 | -0.171 | -0.112 | -0.168 | 0.607% |
| chr15_64019761_A_T | chr15:64019761 | -0.005 | -0.003 | -0.230 | — |
| chr15_64019792_C_G | chr15:64019792 | -0.133 | -0.065 | -0.039 | — |
| chr15_63978855_C_T | chr15:63978855 | -0.165 | -0.254 | -0.173 | <0.001% |
| chr15_64019780_C_G | chr15:64019780 | 0.131 | 0.141 | 0.202 | — |
| chr15_64017188_G_A | chr15:64017188 | 0.161 | 0.032 | 0.209 | <0.001% |
| chr15_64019753_C_A | chr15:64019753 | -0.128 | -0.081 | -0.140 | — |
| chr15_64019763_A_C | chr15:64019763 | 0.128 | 0.101 | 0.135 | — |
| chr15_64017185_T_C | chr15:64017185 | -0.159 | -0.045 | -0.124 | 0.0020% |
| chr15_64019801_G_A | chr15:64019801 | 0.126 | 0.096 | 0.045 | — |
| chr15_63978896_A_C | chr15:63978896 | 0.106 | 0.149 | 0.248 | 46.3% |
| chr15_63998449_C_T | chr15:63998449 | -0.087 | -0.045 | -0.248 | 0.0020% |
| chr15_64000359_G_A | chr15:64000359 | -0.157 | -0.121 | -0.154 | <0.001% |
| chr15_64017252_G_C | chr15:64017252 | -0.113 | -0.030 | -0.248 | <0.001% |
| chr15_64019765_C_G | chr15:64019765 | -0.125 | -0.033 | -0.104 | — |
| chr15_64019781_A_G | chr15:64019781 | 0.125 | 0.101 | 0.152 | <0.001% |
| chr15_64004888_C_T | chr15:64004888 | -0.155 | -0.125 | -0.065 | 0.0046% |
| chr15_63998729_G_A | chr15:63998729 | -0.130 | -0.058 | -0.242 | <0.001% |
| chr15_63998747_T_A | chr15:63998747 | 0.153 | 0.109 | 0.209 | <0.001% |
| chr15_64019738_G_C | chr15:64019738 | 0.121 | 0.096 | 0.000 | — |
| chr15_64019768_C_T | chr15:64019768 | -0.121 | -0.063 | -0.126 | — |
| chr15_64019773_A_T | chr15:64019773 | -0.120 | -0.040 | -0.174 | — |
| chr15_64019780_C_A | chr15:64019780 | 0.120 | 0.078 | 0.174 | — |
| chr15_64000461_T_C | chr15:64000461 | 0.148 | 0.099 | 0.219 | 0.0020% |
| chr15_64004657_T_C | chr15:64004657 | 0.066 | 0.201 | 0.235 | <0.001% |
| chr15_64004733_A_G | chr15:64004733 | -0.146 | -0.157 | -0.235 | <0.001% |
| chr15_64019754_A_C | chr15:64019754 | 0.102 | 0.111 | 0.202 | — |
| chr15_64019787_T_G | chr15:64019787 | -0.118 | -0.106 | -0.107 | — |
| chr15_64017164_C_A | chr15:64017164 | -0.146 | -0.056 | -0.085 | <0.001% |
| chr15_64017210_A_G | chr15:64017210 | 0.126 | 0.088 | 0.229 | <0.001% |
| chr15_64019748_C_T | chr15:64019748 | -0.054 | -0.028 | -0.197 | — |
| chr15_64019794_T_C | chr15:64019794 | 0.115 | 0.048 | 0.067 | — |
| chr15_64019786_A_G | chr15:64019786 | -0.113 | -0.088 | -0.185 | — |
| chr15_64017248_G_A | chr15:64017248 | 0.140 | 0.070 | 0.144 | <0.001% |
| chr15_64016614_A_C | chr15:64016614 | 0.111 | 0.057 | 0.160 | — |
| chr15_64019765_C_A | chr15:64019765 | -0.110 | -0.048 | -0.129 | — |
| chr15_64019765_C_T | chr15:64019765 | -0.107 | -0.038 | -0.188 | — |
| chr15_63998597_G_A | chr15:63998597 | -0.037 | -0.006 | -0.216 | <0.001% |
| chr15_64000440_C_T | chr15:64000440 | -0.136 | -0.080 | -0.147 | 0.0013% |
| chr15_64019760_G_T | chr15:64019760 | -0.080 | -0.083 | -0.185 | — |
| chr15_64000429_C_T | chr15:64000429 | 0.134 | 0.077 | 0.111 | <0.001% |
| chr15_63998334_C_T | chr15:63998334 | -0.132 | -0.064 | -0.183 | <0.001% |
| chr15_63998390_G_A | chr15:63998390 | 0.099 | 0.042 | 0.209 | <0.001% |
| chr15_64000359_G_T | chr15:64000359 | -0.132 | -0.083 | -0.108 | 0.0079% |
| chr15_63998594_G_C | chr15:63998594 | 0.130 | 0.037 | 0.092 | <0.001% |
| chr15_63998328_C_A | chr15:63998328 | -0.124 | -0.042 | -0.203 | <0.001% |
| chr15_63998429_G_A | chr15:63998429 | 0.078 | 0.061 | 0.203 | <0.001% |
| chr15_64019746_G_T | chr15:64019746 | -0.089 | -0.078 | -0.174 | — |
| chr15_63998313_G_C | chr15:63998313 | 0.008 | -0.003 | -0.196 | 0.184% |
| chr15_64016595_A_G | chr15:64016595 | 0.093 | 0.116 | 0.169 | — |
| chr15_64019800_T_G | chr15:64019800 | 0.098 | 0.093 | 0.081 | — |
| chr15_64004742_A_C | chr15:64004742 | -0.122 | -0.032 | -0.163 | 28.9% |
| chr15_64019742_G_T | chr15:64019742 | -0.097 | -0.093 | -0.163 | — |
| chr15_64004699_C_G | chr15:64004699 | 0.120 | 0.067 | 0.163 | <0.001% |
| chr15_64017311_A_G | chr15:64017311 | 0.049 | -0.002 | 0.190 | <0.001% |
| chr15_64019788_G_C | chr15:64019788 | -0.095 | -0.093 | -0.118 | — |
| chr15_64000366_G_C | chr15:64000366 | -0.115 | -0.072 | -0.123 | 0.0013% |
| chr15_64004902_C_A | chr15:64004902 | -0.070 | -0.160 | 0.183 | 0.0013% |
| chr15_64017182_C_G | chr15:64017182 | 0.045 | -0.018 | 0.183 | 0.015% |
| chr15_64019742_G_C | chr15:64019742 | -0.051 | -0.043 | -0.157 | — |
| chr15_64019751_T_C | chr15:64019751 | 0.082 | 0.055 | 0.157 | 0.0013% |
| chr15_64019756_A_C | chr15:64019756 | 0.092 | 0.030 | 0.093 | — |
| chr15_64019769_T_C | chr15:64019769 | 0.092 | 0.060 | 0.090 | — |
| chr15_64019782_T_A | chr15:64019782 | -0.092 | -0.050 | -0.084 | — |
| chr15_64019790_T_A | chr15:64019790 | -0.038 | -0.128 | -0.157 | — |
| chr15_64004682_T_C | chr15:64004682 | 0.113 | 0.064 | 0.118 | 0.0039% |
| chr15_64017318_C_T | chr15:64017318 | -0.113 | 0.030 | -0.157 | <0.001% |
| chr15_64019757_C_T | chr15:64019757 | 0.028 | 0.035 | -0.154 | <0.001% |
| chr15_64019771_T_G | chr15:64019771 | 0.090 | 0.060 | 0.090 | — |
| chr15_64019792_C_A | chr15:64019792 | -0.061 | -0.113 | -0.154 | — |
| chr15_63979010_C_T | chr15:63979010 | -0.045 | 0.043 | 0.176 | 0.0013% |
| chr15_64004916_G_C | chr15:64004916 | 0.111 | -0.051 | -0.072 | 0.0085% |
| chr15_64019769_T_G | chr15:64019769 | 0.089 | 0.121 | 0.112 | — |
| chr15_64019777_G_C | chr15:64019777 | 0.089 | 0.018 | 0.006 | — |
| chr15_64004692_G_A | chr15:64004692 | -0.109 | -0.016 | 0.033 | 0.026% |
| chr15_64019760_G_A | chr15:64019760 | -0.048 | -0.060 | -0.149 | 0.064% |
| chr15_63978853_G_A | chr15:63978853 | -0.108 | -0.200 | -0.157 | <0.001% |
| chr15_64004771_G_T | chr15:64004771 | -0.080 | 0.010 | -0.170 | <0.001% |
| chr15_64019786_A_T | chr15:64019786 | -0.030 | -0.015 | -0.146 | — |
| chr15_64019793_C_G | chr15:64019793 | -0.085 | -0.154 | -0.124 | — |
| chr15_64019797_T_A | chr15:64019797 | -0.085 | -0.045 | -0.056 | — |
| chr15_63998755_G_A | chr15:63998755 | -0.105 | -0.072 | -0.085 | 0.0039% |
| chr15_64004673_G_A | chr15:64004673 | 0.105 | 0.042 | 0.052 | 0.256% |
| chr15_64004937_A_T | chr15:64004937 | -0.105 | -0.035 | 0.013 | <0.001% |
| chr15_64019707_T_C | chr15:64019707 | 0.105 | 0.038 | 0.088 | <0.001% |
| chr15_63998344_G_C | chr15:63998344 | -0.070 | 0.026 | -0.163 | 0.0072% |
| chr15_64017317_C_G | chr15:64017317 | -0.103 | -0.061 | -0.059 | <0.001% |
| chr15_64019755_G_A | chr15:64019755 | 0.082 | 0.063 | 0.034 | — |
| chr15_64019758_A_T | chr15:64019758 | -0.070 | -0.083 | -0.140 | — |
| chr15_64019775_T_C | chr15:64019775 | 0.082 | 0.068 | 0.101 | — |
| chr15_63998748_A_C | chr15:63998748 | -0.101 | -0.069 | -0.118 | 0.021% |
| chr15_64019755_G_T | chr15:64019755 | -0.080 | -0.028 | -0.118 | — |
| chr15_64019777_G_A | chr15:64019777 | 0.080 | 0.043 | 0.022 | <0.001% |
| chr15_64019793_C_T | chr15:64019793 | -0.080 | -0.116 | -0.073 | — |
| chr15_63998455_G_A | chr15:63998455 | -0.049 | -0.016 | -0.157 | <0.001% |
| chr15_64000391_C_A | chr15:64000391 | 0.099 | 0.032 | 0.064 | 0.0026% |
| chr15_64004721_C_T | chr15:64004721 | -0.076 | -0.061 | -0.157 | 0.0026% |
| chr15_64016588_G_A | chr15:64016588 | 0.007 | 0.024 | -0.135 | — |
| chr15_64017187_G_C | chr15:64017187 | 0.000 | -0.029 | 0.157 | 0.0013% |
| chr15_64019750_G_T | chr15:64019750 | -0.079 | -0.030 | -0.101 | — |
| chr15_64019759_G_A | chr15:64019759 | -0.079 | -0.078 | -0.135 | — |
| chr15_64019775_T_A | chr15:64019775 | 0.077 | 0.073 | 0.135 | — |
| chr15_64019792_C_T | chr15:64019792 | -0.067 | -0.121 | -0.135 | — |
| chr15_64019801_G_C | chr15:64019801 | -0.070 | -0.055 | -0.135 | — |
| chr15_63998708_C_T | chr15:63998708 | -0.097 | -0.059 | 0.000 | <0.001% |
| chr15_64019753_C_T | chr15:64019753 | -0.077 | -0.015 | -0.129 | 0.0013% |
| chr15_64019776_T_A | chr15:64019776 | 0.077 | 0.071 | 0.006 | — |
| chr15_64016528_T_G | chr15:64016528 | 0.022 | 0.008 | 0.129 | — |
| chr15_64016591_C_T | chr15:64016591 | -0.009 | -0.001 | -0.129 | — |
| chr15_64019759_G_T | chr15:64019759 | -0.070 | -0.076 | -0.129 | — |
| chr15_63998595_G_A | chr15:63998595 | 0.093 | 0.026 | 0.137 | 0.0059% |
| chr15_64000329_G_A | chr15:64000329 | 0.093 | 0.093 | 0.085 | 0.0039% |
| chr15_64004610_G_C | chr15:64004610 | -0.093 | -0.045 | -0.029 | <0.001% |
| chr15_64017349_A_G | chr15:64017349 | 0.093 | 0.034 | 0.059 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.