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CNTLN
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CNTLN
chr9:17,035,039..17,603,923, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_17134979_G_C | chr9:17134979 | -1.000 | -1.000 | -1.000 | — |
| chr9_17134976_C_G | chr9:17134976 | -1.000 | -1.000 | -1.000 | — |
| chr9_17134979_G_T | chr9:17134979 | -1.000 | -0.875 | -1.000 | — |
| chr9_17134980_C_G | chr9:17134980 | -1.000 | -0.652 | -1.000 | — |
| chr9_17135041_A_C | chr9:17135041 | 1.000 | 1.000 | 1.000 | — |
| chr9_17134976_C_A | chr9:17134976 | -1.000 | -0.735 | -1.000 | — |
| chr9_17134980_C_A | chr9:17134980 | -0.810 | -0.431 | -1.000 | — |
| chr9_17134975_G_C | chr9:17134975 | -1.000 | -0.668 | -1.000 | — |
| chr9_17134981_G_A | chr9:17134981 | -1.000 | -0.623 | -1.000 | — |
| chr9_17134976_C_T | chr9:17134976 | -0.975 | -0.585 | -1.000 | — |
| chr9_17134979_G_A | chr9:17134979 | -0.845 | -0.502 | -1.000 | — |
| chr9_17135021_G_T | chr9:17135021 | -1.000 | -0.677 | -1.000 | — |
| chr9_17134961_G_C | chr9:17134961 | 0.371 | 0.211 | 1.000 | — |
| chr9_17063737_C_A | chr9:17063737 | -1.000 | -0.604 | -0.619 | <0.001% |
| chr9_17134910_C_G | chr9:17134910 | -1.000 | -0.764 | -0.993 | 0.0020% |
| chr9_17134982_C_G | chr9:17134982 | -0.843 | -0.495 | -1.000 | — |
| chr9_17134982_C_A | chr9:17134982 | -0.724 | -0.486 | -1.000 | — |
| chr9_17134974_C_T | chr9:17134974 | -0.637 | -0.342 | -1.000 | — |
| chr9_17063745_C_A | chr9:17063745 | -1.000 | -0.562 | -0.660 | 0.0033% |
| chr9_17135014_A_G | chr9:17135014 | 1.000 | 0.284 | 1.000 | <0.001% |
| chr9_17135022_G_A | chr9:17135022 | -0.891 | -0.514 | -1.000 | — |
| chr9_17134963_G_A | chr9:17134963 | 0.041 | 0.147 | 1.000 | 0.0053% |
| chr9_17135021_G_C | chr9:17135021 | -0.656 | -0.220 | -1.000 | — |
| chr9_17134975_G_T | chr9:17134975 | -0.724 | -0.335 | -1.000 | <0.001% |
| chr9_17135022_G_T | chr9:17135022 | -0.697 | -0.371 | -1.000 | — |
| chr9_17057936_C_G | chr9:17057936 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr9_17134909_C_T | chr9:17134909 | -1.000 | -0.703 | -0.654 | <0.001% |
| chr9_17134911_C_G | chr9:17134911 | -1.000 | -0.735 | -0.588 | <0.001% |
| chr9_17134981_G_C | chr9:17134981 | -0.608 | -0.294 | -1.000 | — |
| chr9_17134978_T_A | chr9:17134978 | -0.544 | -0.342 | -1.000 | — |
| chr9_17134910_C_T | chr9:17134910 | -1.000 | -0.760 | -0.536 | <0.001% |
| chr9_17134977_A_T | chr9:17134977 | -0.633 | -0.355 | -1.000 | — |
| chr9_17134973_G_C | chr9:17134973 | -0.647 | -0.109 | -1.000 | — |
| chr9_17135025_G_A | chr9:17135025 | -0.639 | -0.102 | -1.000 | — |
| chr9_17134973_G_T | chr9:17134973 | -0.596 | -0.131 | -1.000 | — |
| chr9_17134961_G_A | chr9:17134961 | 0.404 | -0.035 | 1.000 | — |
| chr9_17134980_C_T | chr9:17134980 | -0.394 | -0.220 | -1.000 | — |
| chr9_17134923_G_A | chr9:17134923 | -0.915 | -0.668 | -0.667 | 0.0013% |
| chr9_17135020_A_T | chr9:17135020 | -0.598 | -0.275 | -1.000 | <0.001% |
| chr9_17135027_G_T | chr9:17135027 | -0.511 | -0.211 | -1.000 | — |
| chr9_17135037_G_C | chr9:17135037 | 0.435 | 0.518 | 1.000 | <0.001% |
| chr9_17135022_G_C | chr9:17135022 | -0.268 | -0.252 | -1.000 | — |
| chr9_17134875_C_T | chr9:17134875 | -0.858 | -0.540 | -0.471 | 0.035% |
| chr9_17134964_A_T | chr9:17134964 | 0.847 | 0.351 | 1.000 | — |
| chr9_17135024_G_C | chr9:17135024 | -0.557 | -0.134 | -1.000 | — |
| chr9_17134877_T_A | chr9:17134877 | -0.821 | -0.575 | -0.418 | <0.001% |
| chr9_17134964_A_C | chr9:17134964 | 0.810 | 0.431 | 0.941 | — |
| chr9_17135024_G_T | chr9:17135024 | -0.734 | -0.179 | -1.000 | — |
| chr9_17135011_G_C | chr9:17135011 | 0.186 | 0.294 | 1.000 | — |
| chr9_17134959_G_C | chr9:17134959 | 0.759 | 0.230 | 1.000 | — |
| chr9_17134965_A_C | chr9:17134965 | 0.509 | 0.163 | 1.000 | — |
| chr9_17135020_A_C | chr9:17135020 | -0.528 | -0.230 | -1.000 | — |
| chr9_17134925_C_T | chr9:17134925 | -0.748 | -0.546 | -0.222 | <0.001% |
| chr9_17134959_G_A | chr9:17134959 | 0.439 | -0.010 | 1.000 | — |
| chr9_17134959_G_T | chr9:17134959 | 0.736 | 0.150 | 0.627 | <0.001% |
| chr9_17134902_C_T | chr9:17134902 | -0.728 | -0.435 | -0.222 | 0.0013% |
| chr9_17134977_A_C | chr9:17134977 | -0.447 | -0.310 | -1.000 | — |
| chr9_17063734_C_A | chr9:17063734 | -0.720 | -0.300 | -0.227 | <0.001% |
| chr9_17134961_G_T | chr9:17134961 | 0.715 | 0.105 | 0.575 | — |
| chr9_17134911_C_A | chr9:17134911 | 0.680 | 0.358 | 1.000 | <0.001% |
| chr9_17135024_G_A | chr9:17135024 | -0.544 | -0.022 | -1.000 | 0.0013% |
| chr9_17134977_A_G | chr9:17134977 | -0.447 | -0.224 | -1.000 | — |
| chr9_17135027_G_A | chr9:17135027 | -0.404 | -0.147 | -1.000 | 0.0059% |
| chr9_17135023_T_G | chr9:17135023 | 0.689 | 0.537 | -0.065 | — |
| chr9_17135027_G_C | chr9:17135027 | -0.272 | 0.128 | -1.000 | — |
| chr9_17134958_G_T | chr9:17134958 | 0.668 | 0.233 | 1.000 | — |
| chr9_17134974_C_A | chr9:17134974 | -0.476 | -0.198 | -1.000 | — |
| chr9_17134978_T_G | chr9:17134978 | -0.371 | -0.230 | -1.000 | — |
| chr9_17134911_C_T | chr9:17134911 | -0.664 | -0.479 | -0.418 | <0.001% |
| chr9_17134974_C_G | chr9:17134974 | -0.402 | -0.093 | -1.000 | — |
| chr9_17135026_A_T | chr9:17135026 | -0.342 | -0.185 | -1.000 | — |
| chr9_17135025_G_C | chr9:17135025 | -0.186 | -0.125 | -1.000 | — |
| chr9_17135042_C_G | chr9:17135042 | 0.175 | 0.096 | 1.000 | — |
| chr9_17135031_C_A | chr9:17135031 | 0.458 | 0.348 | 1.000 | — |
| chr9_17057950_G_A | chr9:17057950 | 0.627 | 0.939 | 0.797 | <0.001% |
| chr9_17134964_A_G | chr9:17134964 | 0.536 | 0.169 | 0.993 | — |
| chr9_17134916_G_T | chr9:17134916 | -0.619 | -0.377 | -0.405 | <0.001% |
| chr9_17134967_A_C | chr9:17134967 | 0.379 | 0.160 | 0.980 | — |
| chr9_17134975_G_A | chr9:17134975 | -0.423 | -0.188 | -0.980 | — |
| chr9_17135032_C_A | chr9:17135032 | 0.528 | 0.211 | 0.980 | — |
| chr9_17134978_T_C | chr9:17134978 | -0.322 | -0.185 | -0.967 | — |
| chr9_17135021_G_A | chr9:17135021 | -0.606 | -0.125 | -0.745 | <0.001% |
| chr9_17135019_G_C | chr9:17135019 | 0.458 | 0.310 | -0.954 | — |
| chr9_17135045_G_A | chr9:17135045 | 0.598 | -0.227 | 0.732 | — |
| chr9_17134981_G_T | chr9:17134981 | -0.445 | -0.217 | -0.941 | — |
| chr9_17135049_C_T | chr9:17135049 | 0.592 | 0.492 | 0.680 | <0.001% |
| chr9_17135039_G_T | chr9:17135039 | 0.021 | 0.805 | -0.928 | — |
| chr9_17134885_C_T | chr9:17134885 | 0.577 | 0.185 | 0.353 | <0.001% |
| chr9_17134962_G_A | chr9:17134962 | 0.565 | 0.153 | 0.915 | 0.0020% |
| chr9_17135029_T_G | chr9:17135029 | -0.363 | 0.048 | -0.915 | — |
| chr9_17057948_C_T | chr9:17057948 | -0.572 | -0.572 | -0.588 | <0.001% |
| chr9_17134963_G_C | chr9:17134963 | 0.482 | 0.166 | 0.902 | — |
| chr9_17134991_G_C | chr9:17134991 | -0.229 | 0.054 | 0.889 | <0.001% |
| chr9_17135018_G_T | chr9:17135018 | -0.507 | -0.077 | -0.889 | — |
| chr9_17134954_C_G | chr9:17134954 | -0.043 | 0.083 | 0.876 | — |
| chr9_17134963_G_T | chr9:17134963 | 0.480 | 0.141 | 0.876 | — |
| chr9_17134898_T_A | chr9:17134898 | -0.548 | -0.332 | -0.418 | <0.001% |
| chr9_17135023_T_C | chr9:17135023 | 0.425 | 0.198 | 0.863 | <0.001% |
| chr9_17134950_C_G | chr9:17134950 | -0.536 | -0.102 | -0.523 | — |
| chr9_17135033_A_G | chr9:17135033 | 0.194 | 0.192 | 0.850 | — |
| chr9_17134966_A_C | chr9:17134966 | 0.532 | 0.083 | 0.758 | — |
| chr9_17057905_G_A | chr9:17057905 | -0.530 | -0.663 | -0.706 | 43.2% |
| chr9_17135026_A_C | chr9:17135026 | -0.293 | -0.185 | -0.837 | — |
| chr9_17135028_T_C | chr9:17135028 | 0.264 | 0.061 | 0.837 | — |
| chr9_17082599_A_C | chr9:17082599 | 0.523 | 0.166 | 0.554 | <0.001% |
| chr9_17134955_C_A | chr9:17134955 | -0.520 | -0.054 | -0.301 | — |
| chr9_17134967_A_T | chr9:17134967 | 0.247 | 0.096 | 0.824 | — |
| chr9_17134995_C_G | chr9:17134995 | -0.186 | -0.077 | -0.824 | — |
| chr9_17057970_A_C | chr9:17057970 | 0.515 | 0.687 | 0.654 | <0.001% |
| chr9_17134952_G_T | chr9:17134952 | -0.109 | -0.083 | -0.810 | — |
| chr9_17134999_C_T | chr9:17134999 | -0.045 | 0.157 | 0.797 | — |
| chr9_17135028_T_G | chr9:17135028 | -0.384 | 0.010 | -0.797 | — |
| chr9_17135029_T_A | chr9:17135029 | -0.173 | -0.144 | -0.797 | — |
| chr9_17135025_G_T | chr9:17135025 | -0.231 | -0.051 | -0.784 | — |
| chr9_17135039_G_A | chr9:17135039 | -0.097 | 0.141 | 0.771 | 0.0013% |
| chr9_17134994_C_G | chr9:17134994 | -0.247 | -0.224 | -0.745 | — |
| chr9_17134995_C_A | chr9:17134995 | -0.074 | -0.067 | -0.745 | — |
| chr9_17057910_G_C | chr9:17057910 | -0.468 | -0.580 | -0.634 | <0.001% |
| chr9_17135012_G_C | chr9:17135012 | 0.249 | 0.208 | 0.732 | — |
| chr9_17135032_C_G | chr9:17135032 | 0.297 | 0.310 | 0.732 | — |
| chr9_17057945_A_G | chr9:17057945 | -0.460 | -0.436 | -0.641 | <0.001% |
| chr9_17057949_A_G | chr9:17057949 | -0.456 | -0.463 | -0.556 | 0.0013% |
| chr9_17134999_C_G | chr9:17134999 | -0.456 | 0.096 | -0.405 | — |
| chr9_17135018_G_C | chr9:17135018 | -0.252 | -0.109 | -0.719 | — |
| chr9_17057971_C_T | chr9:17057971 | -0.392 | -0.446 | -0.716 | <0.001% |
| chr9_17134992_T_G | chr9:17134992 | -0.198 | -0.204 | -0.706 | — |
| chr9_17135016_A_G | chr9:17135016 | -0.441 | -0.118 | -0.627 | <0.001% |
| chr9_17057907_G_A | chr9:17057907 | -0.438 | -0.497 | -0.690 | 0.0013% |
| chr9_17135013_G_C | chr9:17135013 | 0.324 | 0.246 | 0.693 | — |
| chr9_17134962_G_T | chr9:17134962 | 0.433 | 0.089 | 0.353 | — |
| chr9_17134965_A_T | chr9:17134965 | 0.334 | -0.042 | 0.680 | — |
| chr9_17135019_G_A | chr9:17135019 | -0.429 | -0.144 | -0.431 | — |
| chr9_17134893_C_A | chr9:17134893 | 0.421 | 0.272 | 0.131 | <0.001% |
| chr9_17135030_T_A | chr9:17135030 | 0.243 | 0.195 | 0.667 | — |
| chr9_17134957_A_T | chr9:17134957 | -0.416 | -0.131 | 0.588 | — |
| chr9_17134952_G_A | chr9:17134952 | 0.410 | 0.086 | 0.157 | <0.001% |
| chr9_17135048_C_A | chr9:17135048 | 0.305 | 0.077 | 0.641 | — |
| chr9_17134899_G_C | chr9:17134899 | -0.400 | -0.335 | -0.327 | <0.001% |
| chr9_17134952_G_C | chr9:17134952 | -0.398 | -0.118 | -0.209 | — |
| chr9_17134966_A_T | chr9:17134966 | 0.392 | -0.029 | 0.340 | — |
| chr9_17134995_C_T | chr9:17134995 | 0.037 | -0.029 | -0.614 | — |
| chr9_17135032_C_T | chr9:17135032 | 0.384 | 0.192 | 0.431 | — |
| chr9_17134965_A_G | chr9:17134965 | 0.379 | 0.070 | 0.536 | — |
| chr9_17135008_T_G | chr9:17135008 | 0.239 | 0.195 | 0.601 | 0.0026% |
| chr9_17135028_T_A | chr9:17135028 | -0.223 | -0.150 | -0.601 | — |
| chr9_17134958_G_C | chr9:17134958 | 0.377 | 0.179 | 0.275 | — |
| chr9_17134950_C_T | chr9:17134950 | -0.375 | -0.134 | -0.484 | <0.001% |
| chr9_17134993_T_C | chr9:17134993 | -0.233 | -0.249 | -0.588 | — |
| chr9_17135040_A_C | chr9:17135040 | 0.324 | 0.585 | 0.588 | — |
| chr9_17135000_T_C | chr9:17135000 | -0.367 | -0.105 | -0.497 | — |
| chr9_17134990_C_A | chr9:17134990 | -0.087 | 0.118 | 0.575 | — |
| chr9_17057870_A_G | chr9:17057870 | 0.361 | 0.476 | 0.507 | 0.0020% |
| chr9_17134990_C_G | chr9:17134990 | -0.361 | 0.058 | -0.078 | — |
| chr9_17134955_C_T | chr9:17134955 | -0.357 | -0.131 | -0.078 | — |
| chr9_17135038_G_T | chr9:17135038 | 0.254 | 0.278 | 0.562 | — |
| chr9_17135043_T_G | chr9:17135043 | 0.291 | 0.058 | 0.549 | — |
| chr9_17135013_G_T | chr9:17135013 | 0.270 | 0.179 | 0.536 | — |
| chr9_17135029_T_C | chr9:17135029 | 0.280 | 0.010 | 0.536 | — |
| chr9_17135045_G_T | chr9:17135045 | 0.338 | 0.134 | 0.340 | — |
| chr9_17135020_A_G | chr9:17135020 | 0.334 | 0.157 | 0.523 | — |
| chr9_17134992_T_A | chr9:17134992 | 0.033 | -0.160 | -0.523 | — |
| chr9_17135031_C_G | chr9:17135031 | 0.301 | 0.288 | 0.523 | — |
| chr9_17135048_C_T | chr9:17135048 | 0.155 | -0.032 | 0.523 | — |
| chr9_17134958_G_A | chr9:17134958 | 0.328 | 0.105 | 0.222 | — |
| chr9_17134863_C_G | chr9:17134863 | -0.326 | -0.032 | -0.118 | <0.001% |
| chr9_17134940_C_T | chr9:17134940 | -0.324 | -0.198 | -0.235 | <0.001% |
| chr9_17134985_T_G | chr9:17134985 | -0.260 | -0.032 | -0.497 | — |
| chr9_17134991_G_A | chr9:17134991 | 0.138 | -0.179 | -0.497 | — |
| chr9_17135037_G_T | chr9:17135037 | 0.194 | 0.252 | 0.497 | — |
| chr9_17134831_A_C | chr9:17134831 | 0.309 | 0.201 | 0.327 | <0.001% |
| chr9_17135019_G_T | chr9:17135019 | 0.309 | 0.313 | 0.327 | — |
| chr9_17134953_G_A | chr9:17134953 | -0.305 | -0.131 | -0.170 | — |
| chr9_17134996_G_A | chr9:17134996 | 0.031 | -0.112 | -0.484 | 0.0013% |
| chr9_17135007_G_T | chr9:17135007 | -0.305 | -0.026 | -0.301 | — |
| chr9_17057921_C_T | chr9:17057921 | 0.297 | 0.473 | 0.330 | 43.2% |
| chr9_17135015_A_T | chr9:17135015 | -0.165 | -0.204 | -0.471 | — |
| chr9_17135035_C_T | chr9:17135035 | 0.190 | -0.048 | 0.471 | — |
| chr9_17134912_G_T | chr9:17134912 | -0.293 | -0.112 | -0.248 | 0.0020% |
| chr9_17135008_T_C | chr9:17135008 | 0.293 | 0.089 | 0.353 | 0.0013% |
| chr9_17082541_A_G | chr9:17082541 | 0.292 | 0.358 | 0.167 | 0.0020% |
| chr9_17134992_T_C | chr9:17134992 | -0.049 | -0.169 | -0.458 | — |
| chr9_17135003_C_A | chr9:17135003 | -0.082 | -0.016 | -0.458 | — |
| chr9_17135012_G_T | chr9:17135012 | 0.282 | 0.137 | 0.431 | — |
| chr9_17063750_T_C | chr9:17063750 | -0.281 | -0.048 | -0.021 | <0.001% |
| chr9_17057886_T_A | chr9:17057886 | 0.280 | 0.403 | 0.343 | <0.001% |
| chr9_17134983_G_A | chr9:17134983 | 0.247 | 0.058 | 0.444 | 0.0099% |
| chr9_17135010_G_T | chr9:17135010 | -0.128 | -0.160 | -0.444 | — |
| chr9_17135037_G_A | chr9:17135037 | 0.107 | 0.051 | 0.444 | 0.0013% |
| chr9_17134960_C_T | chr9:17134960 | 0.272 | 0.137 | -0.065 | — |
| chr9_17134966_A_G | chr9:17134966 | 0.235 | -0.054 | 0.431 | — |
| chr9_17134906_T_C | chr9:17134906 | -0.268 | -0.134 | -0.131 | 0.0013% |
| chr9_17134955_C_G | chr9:17134955 | -0.268 | -0.153 | 0.196 | — |
| chr9_17057990_A_G | chr9:17057990 | -0.265 | -0.331 | -0.301 | <0.001% |
| chr9_17134894_G_C | chr9:17134894 | -0.264 | 0.003 | -0.118 | 0.0033% |
| chr9_17134954_C_T | chr9:17134954 | -0.264 | 0.304 | 0.209 | — |
| chr9_17134996_G_C | chr9:17134996 | -0.049 | -0.153 | -0.418 | — |
| chr9_17134846_G_A | chr9:17134846 | 0.260 | 0.131 | 0.078 | 0.0020% |
| chr9_17134941_G_T | chr9:17134941 | -0.130 | -0.093 | -0.405 | 0.0026% |
| chr9_17135004_C_A | chr9:17135004 | 0.000 | -0.038 | -0.405 | <0.001% |
| chr9_17135009_T_G | chr9:17135009 | 0.078 | 0.185 | 0.405 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.