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COL21A1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near COL21A1
chr6:55,956,589..56,494,128, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr6_56399889_T_A | chr6:56399889 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399929_T_G | chr6:56399929 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399823_T_G | chr6:56399823 | -1.000 | -1.000 | -1.000 | 0.0024% |
| chr6_56399719_C_T | chr6:56399719 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399728_A_T | chr6:56399728 | -1.000 | -1.000 | -0.910 | — |
| chr6_56399720_A_T | chr6:56399720 | -1.000 | -1.000 | -0.922 | — |
| chr6_56399925_T_G | chr6:56399925 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399921_T_A | chr6:56399921 | -1.000 | -1.000 | -0.806 | — |
| chr6_56399718_T_G | chr6:56399718 | -1.000 | -1.000 | -0.623 | — |
| chr6_56399765_G_C | chr6:56399765 | -1.000 | -1.000 | -0.611 | — |
| chr6_56399889_T_G | chr6:56399889 | -1.000 | -1.000 | -0.867 | — |
| chr6_56399923_A_C | chr6:56399923 | -1.000 | -1.000 | -0.763 | — |
| chr6_56399927_A_C | chr6:56399927 | -1.000 | -1.000 | -0.831 | — |
| chr6_56399748_C_G | chr6:56399748 | 1.000 | 1.000 | 1.000 | — |
| chr6_56399846_T_A | chr6:56399846 | -1.000 | -1.000 | -0.629 | — |
| chr6_56399920_G_C | chr6:56399920 | -1.000 | -1.000 | -0.824 | — |
| chr6_56399729_A_T | chr6:56399729 | -1.000 | -1.000 | -0.727 | — |
| chr6_56399767_T_C | chr6:56399767 | -1.000 | -1.000 | -0.342 | — |
| chr6_56399883_G_T | chr6:56399883 | -1.000 | -1.000 | -0.806 | — |
| chr6_56399718_T_C | chr6:56399718 | -1.000 | -1.000 | -0.586 | — |
| chr6_56399816_T_G | chr6:56399816 | -1.000 | -1.000 | -1.000 | — |
| chr6_56399921_T_C | chr6:56399921 | -1.000 | -1.000 | -0.666 | — |
| chr6_56399730_T_A | chr6:56399730 | -1.000 | -1.000 | -0.592 | — |
| chr6_56399767_T_A | chr6:56399767 | -1.000 | -1.000 | -0.421 | — |
| chr6_56399883_G_C | chr6:56399883 | -1.000 | -1.000 | -0.751 | — |
| chr6_56399766_T_G | chr6:56399766 | -1.000 | -1.000 | -0.110 | — |
| chr6_56399728_A_G | chr6:56399728 | -1.000 | -1.000 | -0.672 | — |
| chr6_56399714_T_C | chr6:56399714 | -1.000 | -0.982 | -0.733 | — |
| chr6_56399731_A_C | chr6:56399731 | -1.000 | -1.000 | -0.715 | — |
| chr6_56399888_T_A | chr6:56399888 | -1.000 | -1.000 | -0.708 | — |
| chr6_56399932_C_A | chr6:56399932 | -1.000 | -1.000 | -0.757 | — |
| chr6_56399765_G_T | chr6:56399765 | -1.000 | -1.000 | -0.440 | — |
| chr6_56399727_A_G | chr6:56399727 | -1.000 | -1.000 | -0.519 | — |
| chr6_56399706_T_A | chr6:56399706 | 1.000 | 1.000 | 0.556 | — |
| chr6_56399727_A_T | chr6:56399727 | -1.000 | -1.000 | -0.531 | — |
| chr6_56399883_G_A | chr6:56399883 | -1.000 | -1.000 | -0.702 | — |
| chr6_56399923_A_T | chr6:56399923 | -1.000 | -1.000 | -0.598 | — |
| chr6_56399852_C_A | chr6:56399852 | 1.000 | 1.000 | 0.550 | — |
| chr6_56399925_T_C | chr6:56399925 | -1.000 | -1.000 | -0.916 | — |
| chr6_56399720_A_G | chr6:56399720 | -1.000 | -1.000 | -0.660 | — |
| chr6_56399793_T_A | chr6:56399793 | -1.000 | -1.000 | -0.495 | — |
| chr6_56399893_C_T | chr6:56399893 | -1.000 | -1.000 | -0.574 | — |
| chr6_56399729_A_C | chr6:56399729 | -1.000 | -1.000 | -0.482 | — |
| chr6_56399893_C_A | chr6:56399893 | -1.000 | -1.000 | -0.550 | — |
| chr6_56399928_T_C | chr6:56399928 | -1.000 | -1.000 | -0.586 | — |
| chr6_56399768_T_A | chr6:56399768 | -1.000 | -1.000 | -0.281 | — |
| chr6_56399730_T_G | chr6:56399730 | -1.000 | -0.940 | -0.598 | — |
| chr6_56399769_A_C | chr6:56399769 | -1.000 | -1.000 | -0.250 | — |
| chr6_56399927_A_G | chr6:56399927 | -1.000 | -1.000 | -0.598 | 0.0033% |
| chr6_56399787_A_T | chr6:56399787 | -1.000 | -1.000 | -0.421 | — |
| chr6_56399726_T_G | chr6:56399726 | -1.000 | -0.977 | -0.311 | — |
| chr6_56399719_C_G | chr6:56399719 | -1.000 | -0.868 | -0.592 | — |
| chr6_56399726_T_A | chr6:56399726 | -1.000 | -0.909 | -0.342 | — |
| chr6_56399768_T_C | chr6:56399768 | -1.000 | -1.000 | -0.159 | — |
| chr6_56399745_A_G | chr6:56399745 | -1.000 | -0.857 | -0.403 | — |
| chr6_56399706_T_C | chr6:56399706 | 1.000 | 0.899 | 0.635 | — |
| chr6_56399717_G_T | chr6:56399717 | -1.000 | -0.816 | -0.556 | — |
| chr6_56399766_T_A | chr6:56399766 | -1.000 | -1.000 | -0.165 | — |
| chr6_56399886_C_T | chr6:56399886 | -1.000 | -1.000 | -0.360 | <0.001% |
| chr6_56399712_A_T | chr6:56399712 | -1.000 | -0.764 | -0.635 | — |
| chr6_56399729_A_G | chr6:56399729 | -1.000 | -1.000 | -0.409 | — |
| chr6_56399829_A_G | chr6:56399829 | -1.000 | -1.000 | -0.757 | — |
| chr6_56399920_G_T | chr6:56399920 | -1.000 | -1.000 | -0.531 | — |
| chr6_56399929_T_A | chr6:56399929 | -1.000 | -0.951 | -0.672 | — |
| chr6_56399882_T_G | chr6:56399882 | -1.000 | -0.956 | -0.373 | — |
| chr6_56399888_T_G | chr6:56399888 | -1.000 | -1.000 | -0.580 | — |
| chr6_56399846_T_G | chr6:56399846 | -1.000 | -0.810 | -0.348 | — |
| chr6_56399890_A_T | chr6:56399890 | -1.000 | -1.000 | -0.458 | — |
| chr6_56399921_T_G | chr6:56399921 | -1.000 | -1.000 | -0.544 | — |
| chr6_56399728_A_C | chr6:56399728 | -1.000 | -1.000 | -0.537 | — |
| chr6_56399829_A_T | chr6:56399829 | -1.000 | -0.966 | -0.495 | — |
| chr6_56399704_C_G | chr6:56399704 | 1.000 | 0.826 | 0.617 | — |
| chr6_56399891_A_T | chr6:56399891 | -1.000 | -1.000 | -0.598 | — |
| chr6_56399885_A_G | chr6:56399885 | -1.000 | -1.000 | -0.519 | — |
| chr6_56399716_T_C | chr6:56399716 | 1.000 | 0.535 | 0.690 | — |
| chr6_56399714_T_A | chr6:56399714 | -1.000 | -0.701 | -0.501 | — |
| chr6_56399892_T_G | chr6:56399892 | -1.000 | -1.000 | -0.672 | — |
| chr6_56399624_A_T | chr6:56399624 | 1.000 | 0.873 | 0.476 | — |
| chr6_56399794_G_T | chr6:56399794 | -1.000 | -1.000 | -0.391 | — |
| chr6_56399847_G_C | chr6:56399847 | -1.000 | -0.943 | -0.544 | — |
| chr6_56399929_T_C | chr6:56399929 | -1.000 | -0.875 | -0.623 | 40.9% |
| chr6_56399788_A_T | chr6:56399788 | -1.000 | -1.000 | -0.482 | — |
| chr6_56399790_C_A | chr6:56399790 | -1.000 | -1.000 | -0.293 | — |
| chr6_56399924_A_G | chr6:56399924 | -1.000 | -1.000 | -0.605 | 0.0039% |
| chr6_56399790_C_T | chr6:56399790 | -1.000 | -1.000 | -0.220 | — |
| chr6_56399720_A_C | chr6:56399720 | -1.000 | -0.727 | -0.550 | — |
| chr6_56399769_A_T | chr6:56399769 | -1.000 | -0.909 | -0.177 | — |
| chr6_56399889_T_C | chr6:56399889 | -1.000 | -0.917 | -0.727 | <0.001% |
| chr6_56399731_A_T | chr6:56399731 | -1.000 | -0.795 | -0.434 | — |
| chr6_56399701_T_G | chr6:56399701 | 1.000 | 1.000 | 0.299 | — |
| chr6_56399808_T_A | chr6:56399808 | -1.000 | -0.919 | -0.342 | — |
| chr6_56399792_T_G | chr6:56399792 | -1.000 | -1.000 | -0.238 | — |
| chr6_56399893_C_G | chr6:56399893 | -1.000 | -1.000 | -0.299 | — |
| chr6_56399731_A_G | chr6:56399731 | -1.000 | -0.810 | -0.385 | — |
| chr6_56399789_C_G | chr6:56399789 | -1.000 | -1.000 | -0.379 | — |
| chr6_56399808_T_C | chr6:56399808 | -1.000 | -0.592 | -0.128 | — |
| chr6_56399764_T_G | chr6:56399764 | -1.000 | -0.883 | -0.195 | — |
| chr6_56399923_A_G | chr6:56399923 | -1.000 | -0.914 | -0.379 | — |
| chr6_56399791_T_A | chr6:56399791 | -1.000 | -1.000 | -0.263 | — |
| chr6_56399888_T_C | chr6:56399888 | -1.000 | -1.000 | -0.544 | — |
| chr6_56399887_T_A | chr6:56399887 | -1.000 | -0.909 | -0.324 | 0.0026% |
| chr6_56399718_T_A | chr6:56399718 | -1.000 | -0.649 | -0.391 | — |
| chr6_56399882_T_A | chr6:56399882 | -1.000 | -1.000 | -0.421 | — |
| chr6_56399703_C_T | chr6:56399703 | 1.000 | 0.270 | 0.208 | — |
| chr6_56399722_A_G | chr6:56399722 | -1.000 | -0.660 | -0.427 | — |
| chr6_56399599_G_T | chr6:56399599 | 1.000 | 0.925 | 0.232 | — |
| chr6_56399931_A_G | chr6:56399931 | -1.000 | -0.699 | -0.592 | — |
| chr6_56399700_T_A | chr6:56399700 | 1.000 | 0.551 | 0.379 | — |
| chr6_56399793_T_G | chr6:56399793 | -1.000 | -1.000 | -0.318 | — |
| chr6_56399851_C_T | chr6:56399851 | 1.000 | 0.748 | 0.373 | 0.0020% |
| chr6_56399750_T_G | chr6:56399750 | 1.000 | 0.748 | 0.244 | — |
| chr6_56399793_T_C | chr6:56399793 | -1.000 | -1.000 | -0.195 | — |
| chr6_56399721_T_A | chr6:56399721 | -1.000 | -0.421 | -0.525 | — |
| chr6_56399857_G_T | chr6:56399857 | -1.000 | -0.545 | -0.269 | <0.001% |
| chr6_56399786_T_A | chr6:56399786 | -1.000 | -1.000 | -0.275 | — |
| chr6_56399713_T_G | chr6:56399713 | -1.000 | -0.530 | -0.427 | — |
| chr6_56399735_G_T | chr6:56399735 | -1.000 | -0.660 | -0.415 | — |
| chr6_56399924_A_T | chr6:56399924 | -1.000 | -0.917 | -0.403 | — |
| chr6_56399766_T_C | chr6:56399766 | -1.000 | -0.623 | 0.061 | — |
| chr6_56399859_T_G | chr6:56399859 | -1.000 | -0.577 | -0.373 | — |
| chr6_56399928_T_A | chr6:56399928 | -1.000 | -0.891 | -0.342 | — |
| chr6_56399739_T_C | chr6:56399739 | -1.000 | -0.535 | -0.208 | — |
| chr6_56399791_T_G | chr6:56399791 | -1.000 | -1.000 | -0.269 | — |
| chr6_56399794_G_A | chr6:56399794 | -1.000 | -0.888 | -0.366 | — |
| chr6_56399847_G_A | chr6:56399847 | -1.000 | -0.639 | -0.409 | — |
| chr6_56399736_A_G | chr6:56399736 | -0.998 | -0.452 | -0.165 | — |
| chr6_56399804_G_C | chr6:56399804 | -0.998 | -0.623 | -0.140 | — |
| chr6_56399886_C_A | chr6:56399886 | -0.998 | -1.000 | -0.238 | — |
| chr6_56399713_T_A | chr6:56399713 | -0.991 | -0.499 | -0.501 | — |
| chr6_56399875_C_G | chr6:56399875 | -0.978 | -0.587 | -0.409 | — |
| chr6_56399922_T_A | chr6:56399922 | -0.974 | -0.777 | -0.379 | — |
| chr6_56399922_T_G | chr6:56399922 | -0.974 | -0.891 | -0.318 | — |
| chr6_56399931_A_C | chr6:56399931 | -0.964 | -0.727 | -0.598 | — |
| chr6_56399797_C_G | chr6:56399797 | -0.961 | -0.888 | -0.269 | <0.001% |
| chr6_56399820_G_C | chr6:56399820 | -0.961 | -0.343 | 0.104 | — |
| chr6_56399737_G_C | chr6:56399737 | -0.957 | -0.431 | -0.128 | — |
| chr6_56399867_T_A | chr6:56399867 | -0.954 | -0.816 | -0.434 | — |
| chr6_56399790_C_G | chr6:56399790 | -0.950 | -1.000 | -0.189 | <0.001% |
| chr6_56399794_G_C | chr6:56399794 | -0.947 | -0.862 | -0.183 | — |
| chr6_56399739_T_A | chr6:56399739 | -0.944 | -0.416 | -0.098 | — |
| chr6_56399828_G_C | chr6:56399828 | 0.944 | 0.327 | 0.421 | — |
| chr6_56399737_G_T | chr6:56399737 | -0.937 | -0.457 | -0.208 | — |
| chr6_56399725_G_C | chr6:56399725 | -0.930 | -0.660 | -0.324 | — |
| chr6_56399742_C_T | chr6:56399742 | -0.930 | -0.597 | -0.244 | — |
| chr6_56399770_C_G | chr6:56399770 | -0.930 | -0.629 | -0.128 | — |
| chr6_56399792_T_A | chr6:56399792 | -0.930 | -1.000 | -0.128 | — |
| chr6_56399708_G_T | chr6:56399708 | -0.923 | -0.639 | -0.366 | — |
| chr6_56399885_A_T | chr6:56399885 | -0.923 | -0.826 | -0.336 | — |
| chr6_56399857_G_A | chr6:56399857 | -0.920 | -0.410 | -0.232 | — |
| chr6_56399928_T_G | chr6:56399928 | -0.916 | -0.730 | -0.244 | — |
| chr6_56399715_A_C | chr6:56399715 | -0.909 | -0.447 | -0.354 | — |
| chr6_56399717_G_A | chr6:56399717 | -0.896 | -0.478 | -0.415 | — |
| chr6_56399723_G_T | chr6:56399723 | -0.889 | -0.774 | -0.342 | — |
| chr6_56399839_G_C | chr6:56399839 | -0.879 | -0.436 | -0.232 | — |
| chr6_56399737_G_A | chr6:56399737 | -0.868 | -0.338 | -0.116 | — |
| chr6_56399853_T_C | chr6:56399853 | -0.868 | -0.327 | -0.202 | — |
| chr6_56399687_A_C | chr6:56399687 | 0.862 | 0.623 | 0.464 | — |
| chr6_56399822_G_A | chr6:56399822 | 0.858 | 0.384 | 0.482 | — |
| chr6_56399858_G_C | chr6:56399858 | -0.858 | -0.364 | -0.214 | — |
| chr6_56399770_C_A | chr6:56399770 | -0.841 | -0.592 | -0.159 | — |
| chr6_56399796_G_C | chr6:56399796 | 0.838 | 0.888 | 0.250 | — |
| chr6_56399931_A_T | chr6:56399931 | -0.838 | -0.577 | -0.519 | — |
| chr6_56399882_T_C | chr6:56399882 | -0.831 | -0.764 | -0.232 | 0.0059% |
| chr6_56399800_G_T | chr6:56399800 | -0.824 | -0.629 | -0.293 | — |
| chr6_56399764_T_A | chr6:56399764 | -0.821 | -0.483 | -0.134 | — |
| chr6_56399887_T_C | chr6:56399887 | -0.821 | -0.761 | -0.305 | — |
| chr6_56399724_G_C | chr6:56399724 | -0.807 | -0.649 | -0.311 | — |
| chr6_56399813_G_C | chr6:56399813 | 0.807 | 0.525 | 0.470 | — |
| chr6_56399847_G_T | chr6:56399847 | -0.803 | -0.514 | -0.366 | — |
| chr6_56399704_C_A | chr6:56399704 | 0.800 | 0.623 | 0.208 | — |
| chr6_56399715_A_T | chr6:56399715 | -0.793 | -0.265 | -0.263 | — |
| chr6_56399781_T_G | chr6:56399781 | 0.786 | 0.618 | 0.238 | — |
| chr6_56399843_T_C | chr6:56399843 | 0.786 | 0.686 | 0.269 | 0.0013% |
| chr6_56399857_G_C | chr6:56399857 | -0.783 | -0.338 | -0.116 | — |
| chr6_56399787_A_C | chr6:56399787 | -0.776 | -0.732 | -0.049 | — |
| chr6_56399842_A_G | chr6:56399842 | -0.769 | -0.343 | -0.434 | — |
| chr6_56399862_T_A | chr6:56399862 | -0.769 | -0.727 | -0.287 | — |
| chr6_56399814_G_C | chr6:56399814 | 0.766 | 0.468 | 0.562 | — |
| chr6_56399721_T_G | chr6:56399721 | -0.759 | -0.353 | -0.348 | — |
| chr6_56399884_A_T | chr6:56399884 | -0.759 | -0.753 | -0.244 | — |
| chr6_56399712_A_C | chr6:56399712 | -0.752 | -0.374 | -0.354 | — |
| chr6_56399780_A_G | chr6:56399780 | 0.749 | 0.509 | 0.195 | — |
| chr6_56399716_T_A | chr6:56399716 | -0.745 | -0.400 | -0.342 | — |
| chr6_56399791_T_C | chr6:56399791 | -0.745 | -0.826 | -0.092 | — |
| chr6_56399813_G_T | chr6:56399813 | 0.745 | 0.410 | 0.293 | — |
| chr6_56399858_G_A | chr6:56399858 | -0.742 | -0.281 | -0.165 | — |
| chr6_56399714_T_G | chr6:56399714 | 0.738 | 0.239 | 0.489 | — |
| chr6_56399798_C_A | chr6:56399798 | -0.738 | -0.655 | -0.299 | — |
| chr6_56399914_A_T | chr6:56399914 | -0.732 | -0.603 | -0.348 | — |
| chr6_56399797_C_A | chr6:56399797 | -0.721 | -0.545 | -0.299 | — |
| chr6_56399817_G_T | chr6:56399817 | 0.721 | 0.618 | 0.379 | — |
| chr6_56399828_G_T | chr6:56399828 | 0.721 | 0.301 | 0.250 | — |
| chr6_56399753_C_T | chr6:56399753 | -0.718 | -0.613 | -0.171 | — |
| chr6_56399772_C_A | chr6:56399772 | -0.715 | -0.442 | -0.140 | — |
| chr6_56399861_T_C | chr6:56399861 | -0.715 | -0.644 | -0.202 | 0.0066% |
| chr6_56399679_C_G | chr6:56399679 | -0.711 | -0.623 | -0.269 | — |
| chr6_56399690_C_T | chr6:56399690 | -0.711 | -0.499 | -0.373 | — |
| chr6_56399780_A_C | chr6:56399780 | 0.711 | 0.504 | 0.189 | — |
| chr6_56399858_G_T | chr6:56399858 | -0.711 | -0.291 | -0.159 | — |
| chr6_56399814_G_T | chr6:56399814 | 0.701 | 0.410 | 0.379 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.