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COL21A1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near COL21A1
chr6:55,956,589..56,494,128, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr6_56399889_T_A | chr6:56399889 | -98,112 | -27,200 | -26,368 | — |
| chr6_56399929_T_G | chr6:56399929 | -96,128 | -23,008 | -25,088 | — |
| chr6_56399823_T_G | chr6:56399823 | -93,696 | -22,336 | -32,384 | 2.4e-5 |
| chr6_56399719_C_T | chr6:56399719 | -89,088 | -19,072 | -21,120 | — |
| chr6_56399728_A_T | chr6:56399728 | -84,480 | -20,608 | -19,072 | — |
| chr6_56399720_A_T | chr6:56399720 | -82,944 | -18,816 | -19,328 | — |
| chr6_56399925_T_G | chr6:56399925 | -78,848 | -21,632 | -25,600 | — |
| chr6_56399921_T_A | chr6:56399921 | -76,352 | -19,200 | -16,896 | — |
| chr6_56399718_T_G | chr6:56399718 | -76,032 | -13,504 | -13,056 | — |
| chr6_56399765_G_C | chr6:56399765 | -75,264 | -19,520 | -12,800 | — |
| chr6_56399889_T_G | chr6:56399889 | -73,472 | -22,208 | -18,176 | — |
| chr6_56399923_A_C | chr6:56399923 | -72,704 | -18,272 | -16,000 | — |
| chr6_56399927_A_C | chr6:56399927 | -70,656 | -18,304 | -17,408 | — |
| chr6_56399748_C_G | chr6:56399748 | 69,888 | 17,088 | 20,992 | — |
| chr6_56399846_T_A | chr6:56399846 | -69,888 | -15,296 | -13,184 | — |
| chr6_56399920_G_C | chr6:56399920 | -69,568 | -21,024 | -17,280 | — |
| chr6_56399729_A_T | chr6:56399729 | -68,864 | -15,808 | -15,232 | — |
| chr6_56399767_T_C | chr6:56399767 | -68,608 | -17,536 | -7,168 | — |
| chr6_56399883_G_T | chr6:56399883 | -68,224 | -19,904 | -16,896 | — |
| chr6_56399718_T_C | chr6:56399718 | -68,096 | -12,608 | -12,288 | — |
| chr6_56399816_T_G | chr6:56399816 | -65,920 | -17,536 | -23,808 | — |
| chr6_56399921_T_C | chr6:56399921 | -65,856 | -15,616 | -13,952 | — |
| chr6_56399730_T_A | chr6:56399730 | -65,536 | -13,952 | -12,416 | — |
| chr6_56399767_T_A | chr6:56399767 | -65,536 | -16,704 | -8,832 | — |
| chr6_56399883_G_C | chr6:56399883 | -64,896 | -19,424 | -15,744 | — |
| chr6_56399766_T_G | chr6:56399766 | -64,768 | -16,576 | -2,304 | — |
| chr6_56399728_A_G | chr6:56399728 | -64,512 | -15,424 | -14,080 | — |
| chr6_56399714_T_C | chr6:56399714 | -64,000 | -12,096 | -15,360 | — |
| chr6_56399731_A_C | chr6:56399731 | -63,744 | -14,208 | -14,976 | — |
| chr6_56399888_T_A | chr6:56399888 | -63,744 | -19,936 | -14,848 | — |
| chr6_56399932_C_A | chr6:56399932 | -63,680 | -15,776 | -15,872 | — |
| chr6_56399765_G_T | chr6:56399765 | -63,488 | -17,728 | -9,216 | — |
| chr6_56399727_A_G | chr6:56399727 | -62,720 | -13,440 | -10,880 | — |
| chr6_56399706_T_A | chr6:56399706 | 61,696 | 15,232 | 11,648 | — |
| chr6_56399727_A_T | chr6:56399727 | -61,440 | -12,352 | -11,136 | — |
| chr6_56399883_G_A | chr6:56399883 | -61,440 | -17,632 | -14,720 | — |
| chr6_56399923_A_T | chr6:56399923 | -60,800 | -15,648 | -12,544 | — |
| chr6_56399852_C_A | chr6:56399852 | 60,032 | 15,488 | 11,520 | — |
| chr6_56399925_T_C | chr6:56399925 | -59,776 | -15,360 | -19,200 | — |
| chr6_56399720_A_G | chr6:56399720 | -59,648 | -12,608 | -13,824 | — |
| chr6_56399793_T_A | chr6:56399793 | -59,392 | -18,432 | -10,368 | — |
| chr6_56399893_C_T | chr6:56399893 | -59,136 | -17,088 | -12,032 | — |
| chr6_56399729_A_C | chr6:56399729 | -57,600 | -13,056 | -10,112 | — |
| chr6_56399893_C_A | chr6:56399893 | -57,472 | -16,928 | -11,520 | — |
| chr6_56399928_T_C | chr6:56399928 | -57,472 | -16,992 | -12,288 | — |
| chr6_56399768_T_A | chr6:56399768 | -57,088 | -14,208 | -5,888 | — |
| chr6_56399730_T_G | chr6:56399730 | -56,832 | -11,584 | -12,544 | — |
| chr6_56399769_A_C | chr6:56399769 | -56,704 | -14,528 | -5,248 | — |
| chr6_56399927_A_G | chr6:56399927 | -56,192 | -14,464 | -12,544 | 3.3e-5 |
| chr6_56399787_A_T | chr6:56399787 | -55,808 | -17,472 | -8,832 | — |
| chr6_56399726_T_G | chr6:56399726 | -55,552 | -12,032 | -6,528 | — |
| chr6_56399719_C_G | chr6:56399719 | -55,296 | -10,688 | -12,416 | — |
| chr6_56399726_T_A | chr6:56399726 | -55,040 | -11,200 | -7,168 | — |
| chr6_56399768_T_C | chr6:56399768 | -54,784 | -14,016 | -3,328 | — |
| chr6_56399745_A_G | chr6:56399745 | -54,016 | -10,560 | -8,448 | — |
| chr6_56399706_T_C | chr6:56399706 | 53,760 | 11,072 | 13,312 | — |
| chr6_56399717_G_T | chr6:56399717 | -53,760 | -10,048 | -11,648 | — |
| chr6_56399766_T_A | chr6:56399766 | -53,504 | -13,440 | -3,456 | — |
| chr6_56399886_C_T | chr6:56399886 | -52,864 | -17,760 | -7,552 | 6.6e-6 |
| chr6_56399712_A_T | chr6:56399712 | -52,736 | -9,408 | -13,312 | — |
| chr6_56399729_A_G | chr6:56399729 | -52,736 | -13,376 | -8,576 | — |
| chr6_56399829_A_G | chr6:56399829 | -52,352 | -12,480 | -15,872 | — |
| chr6_56399920_G_T | chr6:56399920 | -52,224 | -15,808 | -11,136 | — |
| chr6_56399929_T_A | chr6:56399929 | -52,224 | -11,712 | -14,080 | — |
| chr6_56399882_T_G | chr6:56399882 | -51,840 | -11,776 | -7,808 | — |
| chr6_56399888_T_G | chr6:56399888 | -51,840 | -16,416 | -12,160 | — |
| chr6_56399846_T_G | chr6:56399846 | -51,584 | -9,984 | -7,296 | — |
| chr6_56399890_A_T | chr6:56399890 | -51,584 | -16,704 | -9,600 | — |
| chr6_56399921_T_G | chr6:56399921 | -51,584 | -12,544 | -11,392 | — |
| chr6_56399728_A_C | chr6:56399728 | -51,456 | -12,416 | -11,264 | — |
| chr6_56399829_A_T | chr6:56399829 | -51,328 | -11,904 | -10,368 | — |
| chr6_56399704_C_G | chr6:56399704 | 51,200 | 10,176 | 12,928 | — |
| chr6_56399891_A_T | chr6:56399891 | -51,072 | -15,264 | -12,544 | — |
| chr6_56399885_A_G | chr6:56399885 | -50,560 | -14,752 | -10,880 | — |
| chr6_56399716_T_C | chr6:56399716 | 50,432 | 6,592 | 14,464 | — |
| chr6_56399714_T_A | chr6:56399714 | -49,920 | -8,640 | -10,496 | — |
| chr6_56399892_T_G | chr6:56399892 | -49,920 | -15,488 | -14,080 | — |
| chr6_56399624_A_T | chr6:56399624 | 49,664 | 10,752 | 9,984 | — |
| chr6_56399794_G_T | chr6:56399794 | -49,664 | -14,912 | -8,192 | — |
| chr6_56399847_G_C | chr6:56399847 | -49,664 | -11,616 | -11,392 | — |
| chr6_56399929_T_C | chr6:56399929 | -49,664 | -10,784 | -13,056 | 4.1e-1 |
| chr6_56399788_A_T | chr6:56399788 | -49,536 | -17,088 | -10,112 | — |
| chr6_56399790_C_A | chr6:56399790 | -49,280 | -17,024 | -6,144 | — |
| chr6_56399924_A_G | chr6:56399924 | -49,216 | -14,336 | -12,672 | 3.9e-5 |
| chr6_56399790_C_T | chr6:56399790 | -48,896 | -16,640 | -4,608 | — |
| chr6_56399720_A_C | chr6:56399720 | -48,640 | -8,960 | -11,520 | — |
| chr6_56399769_A_T | chr6:56399769 | -48,384 | -11,200 | -3,712 | — |
| chr6_56399889_T_C | chr6:56399889 | -47,488 | -11,296 | -15,232 | 6.6e-6 |
| chr6_56399731_A_T | chr6:56399731 | -47,360 | -9,792 | -9,088 | — |
| chr6_56399701_T_G | chr6:56399701 | 46,336 | 13,888 | 6,272 | — |
| chr6_56399808_T_A | chr6:56399808 | -46,080 | -11,328 | -7,168 | — |
| chr6_56399792_T_G | chr6:56399792 | -45,696 | -18,816 | -4,992 | — |
| chr6_56399893_C_G | chr6:56399893 | -45,440 | -14,688 | -6,272 | — |
| chr6_56399731_A_G | chr6:56399731 | -45,312 | -9,984 | -8,064 | — |
| chr6_56399789_C_G | chr6:56399789 | -44,800 | -15,552 | -7,936 | — |
| chr6_56399808_T_C | chr6:56399808 | -44,416 | -7,296 | -2,688 | — |
| chr6_56399764_T_G | chr6:56399764 | -44,288 | -10,880 | -4,096 | — |
| chr6_56399923_A_G | chr6:56399923 | -44,288 | -11,264 | -7,936 | — |
| chr6_56399791_T_A | chr6:56399791 | -44,032 | -16,896 | -5,504 | — |
| chr6_56399888_T_C | chr6:56399888 | -44,032 | -15,104 | -11,392 | — |
| chr6_56399887_T_A | chr6:56399887 | -43,904 | -11,200 | -6,784 | 2.6e-5 |
| chr6_56399718_T_A | chr6:56399718 | -43,264 | -8,000 | -8,192 | — |
| chr6_56399882_T_A | chr6:56399882 | -43,264 | -13,184 | -8,832 | — |
| chr6_56399703_C_T | chr6:56399703 | 43,008 | 3,328 | 4,352 | — |
| chr6_56399722_A_G | chr6:56399722 | -43,008 | -8,128 | -8,960 | — |
| chr6_56399599_G_T | chr6:56399599 | 42,496 | 11,392 | 4,864 | — |
| chr6_56399931_A_G | chr6:56399931 | -42,496 | -8,608 | -12,416 | — |
| chr6_56399700_T_A | chr6:56399700 | 42,240 | 6,784 | 7,936 | — |
| chr6_56399793_T_G | chr6:56399793 | -41,984 | -14,784 | -6,656 | — |
| chr6_56399851_C_T | chr6:56399851 | 41,728 | 9,216 | 7,808 | 2.0e-5 |
| chr6_56399750_T_G | chr6:56399750 | 41,472 | 9,216 | 5,120 | — |
| chr6_56399793_T_C | chr6:56399793 | -41,088 | -12,544 | -4,096 | — |
| chr6_56399721_T_A | chr6:56399721 | -40,960 | -5,184 | -11,008 | — |
| chr6_56399857_G_T | chr6:56399857 | -40,832 | -6,720 | -5,632 | 6.6e-6 |
| chr6_56399786_T_A | chr6:56399786 | -40,704 | -12,736 | -5,760 | — |
| chr6_56399713_T_G | chr6:56399713 | -38,912 | -6,528 | -8,960 | — |
| chr6_56399735_G_T | chr6:56399735 | -38,656 | -8,128 | -8,704 | — |
| chr6_56399924_A_T | chr6:56399924 | -38,528 | -11,296 | -8,448 | — |
| chr6_56399766_T_C | chr6:56399766 | -38,400 | -7,680 | 1,280 | — |
| chr6_56399859_T_G | chr6:56399859 | -38,400 | -7,104 | -7,808 | — |
| chr6_56399928_T_A | chr6:56399928 | -38,400 | -10,976 | -7,168 | — |
| chr6_56399739_T_C | chr6:56399739 | -38,144 | -6,592 | -4,352 | — |
| chr6_56399791_T_G | chr6:56399791 | -37,760 | -17,152 | -5,632 | — |
| chr6_56399794_G_A | chr6:56399794 | -37,760 | -10,944 | -7,680 | — |
| chr6_56399847_G_A | chr6:56399847 | -37,504 | -7,872 | -8,576 | — |
| chr6_56399736_A_G | chr6:56399736 | -37,376 | -5,568 | -3,456 | — |
| chr6_56399804_G_C | chr6:56399804 | -37,376 | -7,680 | -2,944 | — |
| chr6_56399886_C_A | chr6:56399886 | -37,376 | -12,608 | -4,992 | — |
| chr6_56399713_T_A | chr6:56399713 | -37,120 | -6,144 | -10,496 | — |
| chr6_56399875_C_G | chr6:56399875 | -36,608 | -7,232 | -8,576 | — |
| chr6_56399922_T_A | chr6:56399922 | -36,480 | -9,568 | -7,936 | — |
| chr6_56399922_T_G | chr6:56399922 | -36,480 | -10,976 | -6,656 | — |
| chr6_56399931_A_C | chr6:56399931 | -36,096 | -8,960 | -12,544 | — |
| chr6_56399797_C_G | chr6:56399797 | -35,968 | -10,944 | -5,632 | 8.0e-6 |
| chr6_56399820_G_C | chr6:56399820 | -35,968 | -4,224 | 2,176 | — |
| chr6_56399737_G_C | chr6:56399737 | -35,840 | -5,312 | -2,688 | — |
| chr6_56399867_T_A | chr6:56399867 | -35,712 | -10,048 | -9,088 | — |
| chr6_56399790_C_G | chr6:56399790 | -35,584 | -15,680 | -3,968 | 7.7e-6 |
| chr6_56399794_G_C | chr6:56399794 | -35,456 | -10,624 | -3,840 | — |
| chr6_56399739_T_A | chr6:56399739 | -35,328 | -5,120 | -2,048 | — |
| chr6_56399828_G_C | chr6:56399828 | 35,328 | 4,032 | 8,832 | — |
| chr6_56399737_G_T | chr6:56399737 | -35,072 | -5,632 | -4,352 | — |
| chr6_56399725_G_C | chr6:56399725 | -34,816 | -8,128 | -6,784 | — |
| chr6_56399742_C_T | chr6:56399742 | -34,816 | -7,360 | -5,120 | — |
| chr6_56399770_C_G | chr6:56399770 | -34,816 | -7,744 | -2,688 | — |
| chr6_56399792_T_A | chr6:56399792 | -34,816 | -13,888 | -2,688 | — |
| chr6_56399708_G_T | chr6:56399708 | -34,560 | -7,872 | -7,680 | — |
| chr6_56399885_A_T | chr6:56399885 | -34,560 | -10,176 | -7,040 | — |
| chr6_56399857_G_A | chr6:56399857 | -34,432 | -5,056 | -4,864 | — |
| chr6_56399928_T_G | chr6:56399928 | -34,304 | -8,992 | -5,120 | — |
| chr6_56399715_A_C | chr6:56399715 | -34,048 | -5,504 | -7,424 | — |
| chr6_56399717_G_A | chr6:56399717 | -33,536 | -5,888 | -8,704 | — |
| chr6_56399723_G_T | chr6:56399723 | -33,280 | -9,536 | -7,168 | — |
| chr6_56399839_G_C | chr6:56399839 | -32,896 | -5,376 | -4,864 | — |
| chr6_56399737_G_A | chr6:56399737 | -32,512 | -4,160 | -2,432 | — |
| chr6_56399853_T_C | chr6:56399853 | -32,512 | -4,032 | -4,224 | — |
| chr6_56399687_A_C | chr6:56399687 | 32,256 | 7,680 | 9,728 | — |
| chr6_56399822_G_A | chr6:56399822 | 32,128 | 4,736 | 10,112 | — |
| chr6_56399858_G_C | chr6:56399858 | -32,128 | -4,480 | -4,480 | — |
| chr6_56399770_C_A | chr6:56399770 | -31,488 | -7,296 | -3,328 | — |
| chr6_56399796_G_C | chr6:56399796 | 31,360 | 10,944 | 5,248 | — |
| chr6_56399931_A_T | chr6:56399931 | -31,360 | -7,104 | -10,880 | — |
| chr6_56399882_T_C | chr6:56399882 | -31,104 | -9,408 | -4,864 | 5.9e-5 |
| chr6_56399800_G_T | chr6:56399800 | -30,848 | -7,744 | -6,144 | — |
| chr6_56399764_T_A | chr6:56399764 | -30,720 | -5,952 | -2,816 | — |
| chr6_56399887_T_C | chr6:56399887 | -30,720 | -9,376 | -6,400 | — |
| chr6_56399724_G_C | chr6:56399724 | -30,208 | -8,000 | -6,528 | — |
| chr6_56399813_G_C | chr6:56399813 | 30,208 | 6,464 | 9,856 | — |
| chr6_56399847_G_T | chr6:56399847 | -30,080 | -6,336 | -7,680 | — |
| chr6_56399704_C_A | chr6:56399704 | 29,952 | 7,680 | 4,352 | — |
| chr6_56399715_A_T | chr6:56399715 | -29,696 | -3,264 | -5,504 | — |
| chr6_56399781_T_G | chr6:56399781 | 29,440 | 7,616 | 4,992 | — |
| chr6_56399843_T_C | chr6:56399843 | 29,440 | 8,448 | 5,632 | 1.3e-5 |
| chr6_56399857_G_C | chr6:56399857 | -29,312 | -4,160 | -2,432 | — |
| chr6_56399787_A_C | chr6:56399787 | -29,056 | -9,024 | -1,024 | — |
| chr6_56399842_A_G | chr6:56399842 | -28,800 | -4,224 | -9,088 | — |
| chr6_56399862_T_A | chr6:56399862 | -28,800 | -8,960 | -6,016 | — |
| chr6_56399814_G_C | chr6:56399814 | 28,672 | 5,760 | 11,776 | — |
| chr6_56399721_T_G | chr6:56399721 | -28,416 | -4,352 | -7,296 | — |
| chr6_56399884_A_T | chr6:56399884 | -28,416 | -9,280 | -5,120 | — |
| chr6_56399712_A_C | chr6:56399712 | -28,160 | -4,608 | -7,424 | — |
| chr6_56399780_A_G | chr6:56399780 | 28,032 | 6,272 | 4,096 | — |
| chr6_56399716_T_A | chr6:56399716 | -27,904 | -4,928 | -7,168 | — |
| chr6_56399791_T_C | chr6:56399791 | -27,904 | -10,176 | -1,920 | — |
| chr6_56399813_G_T | chr6:56399813 | 27,904 | 5,056 | 6,144 | — |
| chr6_56399858_G_A | chr6:56399858 | -27,776 | -3,456 | -3,456 | — |
| chr6_56399714_T_G | chr6:56399714 | 27,648 | 2,944 | 10,240 | — |
| chr6_56399798_C_A | chr6:56399798 | -27,648 | -8,064 | -6,272 | — |
| chr6_56399914_A_T | chr6:56399914 | -27,392 | -7,424 | -7,296 | — |
| chr6_56399797_C_A | chr6:56399797 | -27,008 | -6,720 | -6,272 | — |
| chr6_56399817_G_T | chr6:56399817 | 27,008 | 7,616 | 7,936 | — |
| chr6_56399828_G_T | chr6:56399828 | 27,008 | 3,712 | 5,248 | — |
| chr6_56399753_C_T | chr6:56399753 | -26,880 | -7,552 | -3,584 | — |
| chr6_56399772_C_A | chr6:56399772 | -26,752 | -5,440 | -2,944 | — |
| chr6_56399861_T_C | chr6:56399861 | -26,752 | -7,936 | -4,224 | 6.6e-5 |
| chr6_56399679_C_G | chr6:56399679 | -26,624 | -7,680 | -5,632 | — |
| chr6_56399690_C_T | chr6:56399690 | -26,624 | -6,144 | -7,808 | — |
| chr6_56399780_A_C | chr6:56399780 | 26,624 | 6,208 | 3,968 | — |
| chr6_56399858_G_T | chr6:56399858 | -26,624 | -3,584 | -3,328 | — |
| chr6_56399814_G_T | chr6:56399814 | 26,240 | 5,056 | 7,936 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.