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CTSH
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near CTSH
chr15:78,821,059..79,045,098, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr15_78913225_A_C | chr15:78913225 | 0.613 | 0.912 | 1.000 | — |
| chr15_78913241_C_A | chr15:78913241 | 0.496 | 0.773 | 0.921 | — |
| chr15_78913128_A_T | chr15:78913128 | 0.370 | 0.514 | 0.719 | — |
| chr15_78913191_T_G | chr15:78913191 | 0.330 | 0.479 | 0.680 | — |
| chr15_78913231_A_C | chr15:78913231 | 0.258 | 0.486 | 0.660 | — |
| chr15_78913185_G_A | chr15:78913185 | -0.291 | -0.398 | -0.618 | — |
| chr15_78913184_T_A | chr15:78913184 | -0.275 | -0.370 | -0.601 | — |
| chr15_78913182_A_T | chr15:78913182 | -0.296 | -0.406 | -0.584 | — |
| chr15_78913184_T_G | chr15:78913184 | -0.280 | -0.368 | -0.567 | — |
| chr15_78913136_T_G | chr15:78913136 | 0.248 | 0.451 | 0.562 | — |
| chr15_78913182_A_C | chr15:78913182 | -0.286 | -0.403 | -0.562 | — |
| chr15_78913185_G_C | chr15:78913185 | -0.292 | -0.393 | -0.562 | <0.001% |
| chr15_78913186_A_C | chr15:78913186 | -0.266 | -0.239 | -0.556 | — |
| chr15_78913222_G_A | chr15:78913222 | -0.210 | -0.345 | -0.556 | 0.0059% |
| chr15_78913222_G_T | chr15:78913222 | -0.217 | -0.360 | -0.556 | — |
| chr15_78913199_G_T | chr15:78913199 | 0.273 | 0.393 | 0.545 | — |
| chr15_78913230_A_G | chr15:78913230 | 0.225 | 0.317 | 0.539 | — |
| chr15_78913222_G_C | chr15:78913222 | -0.220 | -0.363 | -0.534 | — |
| chr15_78913186_A_T | chr15:78913186 | -0.249 | -0.287 | -0.528 | — |
| chr15_78913141_T_A | chr15:78913141 | 0.259 | 0.458 | 0.522 | — |
| chr15_78913186_A_G | chr15:78913186 | -0.244 | -0.270 | -0.511 | — |
| chr15_78913206_A_G | chr15:78913206 | 0.251 | 0.363 | 0.500 | — |
| chr15_78913185_G_T | chr15:78913185 | -0.238 | -0.315 | -0.489 | — |
| chr15_78944910_T_G | chr15:78944910 | 0.252 | 0.196 | 0.112 | — |
| chr15_78913240_A_T | chr15:78913240 | 0.242 | 0.358 | 0.427 | — |
| chr15_78913224_A_T | chr15:78913224 | -0.154 | -0.272 | -0.424 | — |
| chr15_78913172_G_C | chr15:78913172 | 0.231 | 0.365 | 0.416 | — |
| chr15_78913221_T_G | chr15:78913221 | -0.198 | -0.332 | -0.410 | — |
| chr15_78913224_A_G | chr15:78913224 | -0.174 | -0.290 | -0.404 | — |
| chr15_78913126_A_C | chr15:78913126 | 0.212 | 0.270 | 0.393 | — |
| chr15_78913189_T_C | chr15:78913189 | -0.187 | -0.242 | -0.393 | — |
| chr15_78913164_A_T | chr15:78913164 | 0.200 | 0.343 | 0.388 | — |
| chr15_78944914_G_A | chr15:78944914 | 0.069 | 0.038 | -0.382 | — |
| chr15_78913188_T_A | chr15:78913188 | -0.152 | -0.128 | -0.371 | — |
| chr15_78913189_T_A | chr15:78913189 | -0.154 | -0.232 | -0.371 | — |
| chr15_78913226_T_A | chr15:78913226 | -0.148 | -0.259 | -0.371 | — |
| chr15_78944907_C_A | chr15:78944907 | -0.210 | 0.023 | -0.101 | — |
| chr15_78913239_A_G | chr15:78913239 | 0.149 | 0.244 | 0.354 | — |
| chr15_78913224_A_C | chr15:78913224 | -0.157 | -0.262 | -0.348 | — |
| chr15_78913226_T_C | chr15:78913226 | -0.143 | -0.254 | -0.348 | — |
| chr15_78913166_A_C | chr15:78913166 | -0.143 | -0.232 | -0.343 | — |
| chr15_78913181_T_A | chr15:78913181 | -0.183 | -0.257 | -0.343 | — |
| chr15_78913187_T_A | chr15:78913187 | -0.152 | -0.199 | -0.340 | — |
| chr15_78913221_T_A | chr15:78913221 | -0.143 | -0.237 | -0.337 | — |
| chr15_78913232_C_T | chr15:78913232 | -0.121 | -0.242 | -0.337 | <0.001% |
| chr15_78913210_A_C | chr15:78913210 | 0.166 | 0.249 | 0.331 | — |
| chr15_78913214_G_A | chr15:78913214 | 0.155 | 0.277 | 0.326 | — |
| chr15_78913182_A_G | chr15:78913182 | -0.188 | -0.259 | -0.298 | <0.001% |
| chr15_78913187_T_G | chr15:78913187 | -0.150 | -0.196 | -0.320 | — |
| chr15_78913181_T_G | chr15:78913181 | -0.185 | -0.267 | -0.315 | — |
| chr15_78913183_T_A | chr15:78913183 | -0.143 | -0.199 | -0.306 | — |
| chr15_78913184_T_C | chr15:78913184 | -0.177 | -0.259 | -0.292 | — |
| chr15_78913190_T_C | chr15:78913190 | -0.152 | -0.224 | -0.303 | — |
| chr15_78913226_T_G | chr15:78913226 | -0.132 | -0.249 | -0.303 | — |
| chr15_78913190_T_G | chr15:78913190 | -0.152 | -0.214 | -0.298 | — |
| chr15_78913206_A_C | chr15:78913206 | 0.138 | 0.166 | 0.298 | — |
| chr15_78913199_G_C | chr15:78913199 | 0.124 | 0.191 | 0.292 | — |
| chr15_78913205_A_T | chr15:78913205 | -0.115 | -0.219 | -0.292 | — |
| chr15_78913228_T_A | chr15:78913228 | -0.107 | -0.199 | -0.292 | — |
| chr15_78913232_C_G | chr15:78913232 | -0.127 | -0.249 | -0.287 | — |
| chr15_78913233_C_A | chr15:78913233 | -0.105 | -0.189 | -0.287 | — |
| chr15_78913173_T_C | chr15:78913173 | 0.131 | 0.224 | 0.281 | <0.001% |
| chr15_78913189_T_G | chr15:78913189 | -0.140 | -0.186 | -0.281 | — |
| chr15_78913237_G_T | chr15:78913237 | 0.163 | 0.277 | 0.264 | — |
| chr15_78913183_T_C | chr15:78913183 | -0.142 | -0.204 | -0.270 | <0.001% |
| chr15_78944937_C_A | chr15:78944937 | -0.157 | -0.030 | -0.090 | — |
| chr15_78913183_T_G | chr15:78913183 | -0.145 | -0.207 | -0.264 | — |
| chr15_78944906_A_G | chr15:78944906 | 0.154 | 0.065 | 0.067 | — |
| chr15_78913213_G_C | chr15:78913213 | 0.116 | 0.116 | 0.258 | — |
| chr15_78944935_C_G | chr15:78944935 | 0.039 | 0.030 | 0.258 | — |
| chr15_78913221_T_C | chr15:78913221 | -0.121 | -0.212 | -0.247 | — |
| chr15_78913181_T_C | chr15:78913181 | -0.143 | -0.219 | -0.225 | — |
| chr15_78913165_C_T | chr15:78913165 | -0.092 | -0.144 | -0.242 | — |
| chr15_78913228_T_C | chr15:78913228 | -0.111 | -0.191 | -0.242 | — |
| chr15_78913235_A_T | chr15:78913235 | 0.107 | 0.154 | 0.242 | — |
| chr15_78944907_C_G | chr15:78944907 | -0.128 | -0.008 | -0.236 | — |
| chr15_78913165_C_G | chr15:78913165 | -0.084 | -0.121 | -0.230 | — |
| chr15_78913174_A_C | chr15:78913174 | 0.108 | 0.161 | 0.230 | — |
| chr15_78913223_G_C | chr15:78913223 | -0.092 | -0.174 | -0.230 | — |
| chr15_78913228_T_G | chr15:78913228 | -0.102 | -0.202 | -0.230 | — |
| chr15_78944934_T_C | chr15:78944934 | -0.134 | -0.013 | -0.090 | — |
| chr15_78913233_C_G | chr15:78913233 | -0.103 | -0.194 | -0.225 | — |
| chr15_78913134_A_T | chr15:78913134 | -0.080 | -0.128 | -0.219 | — |
| chr15_78913165_C_A | chr15:78913165 | -0.089 | -0.093 | -0.219 | — |
| chr15_78913177_T_C | chr15:78913177 | 0.106 | 0.139 | 0.219 | — |
| chr15_78913190_T_A | chr15:78913190 | -0.112 | -0.065 | -0.219 | — |
| chr15_78944915_C_G | chr15:78944915 | -0.128 | -0.025 | 0.022 | — |
| chr15_78913215_C_A | chr15:78913215 | -0.064 | -0.116 | -0.216 | — |
| chr15_78913198_G_A | chr15:78913198 | 0.114 | 0.181 | 0.213 | 0.0039% |
| chr15_78913201_G_T | chr15:78913201 | -0.090 | -0.098 | -0.213 | — |
| chr15_78944917_G_T | chr15:78944917 | 0.108 | 0.116 | 0.213 | — |
| chr15_78944928_G_A | chr15:78944928 | 0.023 | -0.018 | 0.213 | — |
| chr15_78928806_T_G | chr15:78928806 | -0.003 | -0.031 | -0.208 | — |
| chr15_78944909_G_C | chr15:78944909 | -0.121 | -0.038 | -0.079 | — |
| chr15_78913116_T_A | chr15:78913116 | 0.066 | 0.166 | 0.202 | — |
| chr15_78913152_A_C | chr15:78913152 | -0.081 | -0.128 | -0.202 | — |
| chr15_78913171_A_C | chr15:78913171 | 0.070 | 0.118 | 0.202 | — |
| chr15_78913223_G_A | chr15:78913223 | -0.073 | -0.128 | -0.202 | — |
| chr15_78913236_G_T | chr15:78913236 | 0.108 | 0.181 | 0.197 | — |
| chr15_78913225_A_T | chr15:78913225 | -0.086 | -0.154 | -0.194 | — |
| chr15_78913125_T_C | chr15:78913125 | 0.093 | 0.108 | 0.191 | — |
| chr15_78913156_C_T | chr15:78913156 | -0.070 | -0.091 | -0.191 | — |
| chr15_78913139_C_T | chr15:78913139 | -0.058 | -0.103 | -0.185 | — |
| chr15_78913148_G_T | chr15:78913148 | -0.066 | -0.093 | -0.185 | — |
| chr15_78913207_G_T | chr15:78913207 | -0.060 | -0.116 | -0.185 | — |
| chr15_78913232_C_A | chr15:78913232 | -0.085 | -0.189 | -0.185 | — |
| chr15_78913162_G_A | chr15:78913162 | -0.067 | -0.091 | -0.180 | — |
| chr15_78913200_T_G | chr15:78913200 | -0.075 | -0.161 | -0.180 | — |
| chr15_78913206_A_T | chr15:78913206 | -0.075 | -0.151 | -0.180 | — |
| chr15_78913229_G_T | chr15:78913229 | -0.066 | -0.159 | -0.180 | — |
| chr15_78944924_A_T | chr15:78944924 | 0.069 | 0.045 | 0.180 | — |
| chr15_78944928_G_T | chr15:78944928 | 0.069 | 0.010 | 0.180 | — |
| chr15_78913153_A_G | chr15:78913153 | 0.082 | 0.106 | 0.174 | — |
| chr15_78913236_G_A | chr15:78913236 | 0.102 | 0.184 | 0.169 | — |
| chr15_78913237_G_C | chr15:78913237 | 0.083 | 0.093 | 0.174 | — |
| chr15_78944918_C_G | chr15:78944918 | -0.102 | -0.050 | -0.079 | — |
| chr15_78913196_A_G | chr15:78913196 | 0.064 | 0.081 | 0.169 | — |
| chr15_78913198_G_T | chr15:78913198 | 0.081 | 0.111 | 0.169 | — |
| chr15_78913210_A_T | chr15:78913210 | -0.062 | -0.081 | -0.169 | — |
| chr15_78913223_G_T | chr15:78913223 | -0.066 | -0.121 | -0.169 | — |
| chr15_78913229_G_A | chr15:78913229 | -0.062 | -0.151 | -0.169 | — |
| chr15_78913130_G_A | chr15:78913130 | -0.057 | -0.086 | -0.163 | — |
| chr15_78913154_T_C | chr15:78913154 | 0.066 | 0.088 | 0.163 | — |
| chr15_78913170_G_C | chr15:78913170 | 0.069 | 0.121 | 0.163 | — |
| chr15_78913180_T_A | chr15:78913180 | -0.082 | -0.118 | -0.163 | — |
| chr15_78913229_G_C | chr15:78913229 | -0.062 | -0.149 | -0.163 | — |
| chr15_78944913_G_A | chr15:78944913 | 0.095 | 0.071 | 0.056 | — |
| chr15_78944932_A_C | chr15:78944932 | -0.095 | -0.071 | 0.079 | — |
| chr15_78913188_T_G | chr15:78913188 | -0.094 | -0.010 | -0.152 | — |
| chr15_78913143_G_A | chr15:78913143 | -0.058 | -0.101 | -0.160 | — |
| chr15_78913159_C_A | chr15:78913159 | -0.051 | -0.076 | -0.157 | — |
| chr15_78913201_G_A | chr15:78913201 | -0.087 | -0.050 | -0.157 | — |
| chr15_78928803_T_G | chr15:78928803 | -0.006 | -0.029 | -0.157 | — |
| chr15_78944919_A_G | chr15:78944919 | 0.020 | -0.013 | -0.157 | — |
| chr15_78913126_A_G | chr15:78913126 | 0.077 | 0.076 | 0.152 | — |
| chr15_78913174_A_T | chr15:78913174 | 0.075 | 0.101 | 0.152 | — |
| chr15_78913215_C_G | chr15:78913215 | -0.054 | -0.088 | -0.152 | — |
| chr15_78913216_T_A | chr15:78913216 | 0.080 | 0.116 | 0.152 | — |
| chr15_78944912_C_A | chr15:78944912 | -0.089 | -0.020 | -0.112 | — |
| chr15_78944923_C_A | chr15:78944923 | -0.089 | -0.005 | -0.056 | <0.001% |
| chr15_78944933_C_A | chr15:78944933 | 0.075 | 0.018 | -0.146 | — |
| chr15_78944937_C_G | chr15:78944937 | -0.085 | -0.030 | 0.000 | — |
| chr15_78913124_A_C | chr15:78913124 | 0.062 | 0.071 | 0.140 | — |
| chr15_78913139_C_A | chr15:78913139 | -0.033 | -0.076 | -0.140 | — |
| chr15_78913148_G_C | chr15:78913148 | -0.059 | -0.088 | -0.140 | — |
| chr15_78913176_G_C | chr15:78913176 | 0.076 | 0.098 | 0.140 | — |
| chr15_78913212_T_A | chr15:78913212 | 0.065 | 0.106 | 0.140 | — |
| chr15_78913213_G_T | chr15:78913213 | 0.072 | 0.159 | 0.140 | — |
| chr15_78913215_C_T | chr15:78913215 | -0.036 | -0.063 | -0.140 | — |
| chr15_78913239_A_T | chr15:78913239 | 0.070 | 0.108 | 0.140 | — |
| chr15_78913241_C_G | chr15:78913241 | 0.052 | 0.083 | 0.140 | — |
| chr15_78913241_C_T | chr15:78913241 | 0.082 | 0.184 | 0.135 | — |
| chr15_78944917_G_A | chr15:78944917 | 0.082 | 0.058 | 0.045 | — |
| chr15_78913240_A_C | chr15:78913240 | 0.080 | 0.151 | 0.135 | — |
| chr15_78913125_T_G | chr15:78913125 | 0.060 | 0.058 | 0.135 | — |
| chr15_78913149_C_T | chr15:78913149 | -0.045 | -0.071 | -0.135 | — |
| chr15_78913200_T_A | chr15:78913200 | 0.070 | 0.096 | 0.135 | — |
| chr15_78913234_C_A | chr15:78913234 | -0.061 | -0.113 | -0.135 | — |
| chr15_78944916_G_A | chr15:78944916 | 0.079 | 0.040 | -0.034 | 0.0039% |
| chr15_78913195_C_T | chr15:78913195 | -0.046 | -0.068 | -0.132 | — |
| chr15_78913231_A_T | chr15:78913231 | 0.048 | 0.048 | 0.132 | — |
| chr15_78913159_C_T | chr15:78913159 | -0.042 | -0.050 | -0.129 | — |
| chr15_78913188_T_C | chr15:78913188 | -0.064 | -0.015 | -0.129 | — |
| chr15_78913192_G_C | chr15:78913192 | 0.065 | 0.083 | 0.129 | — |
| chr15_78913193_C_A | chr15:78913193 | -0.041 | -0.088 | -0.129 | — |
| chr15_78913208_T_G | chr15:78913208 | 0.045 | 0.068 | 0.129 | — |
| chr15_78913211_A_C | chr15:78913211 | 0.052 | 0.060 | 0.129 | — |
| chr15_78913219_G_A | chr15:78913219 | 0.063 | 0.118 | 0.129 | — |
| chr15_78928685_C_G | chr15:78928685 | -0.006 | -0.014 | -0.129 | — |
| chr15_78928720_A_G | chr15:78928720 | -0.011 | 0.000 | -0.129 | — |
| chr15_78944910_T_C | chr15:78944910 | 0.075 | 0.000 | 0.045 | — |
| chr15_78944911_T_A | chr15:78944911 | 0.069 | 0.013 | 0.129 | — |
| chr15_78944911_T_G | chr15:78944911 | 0.030 | -0.038 | 0.129 | — |
| chr15_78944915_C_A | chr15:78944915 | -0.075 | -0.025 | -0.101 | — |
| chr15_78944932_A_G | chr15:78944932 | -0.075 | -0.023 | -0.011 | — |
| chr15_78913209_G_C | chr15:78913209 | 0.074 | 0.106 | 0.096 | — |
| chr15_78913227_T_A | chr15:78913227 | -0.036 | -0.108 | -0.126 | — |
| chr15_78913213_G_A | chr15:78913213 | 0.073 | 0.098 | 0.118 | — |
| chr15_78913136_T_C | chr15:78913136 | 0.046 | 0.045 | 0.124 | — |
| chr15_78928809_T_C | chr15:78928809 | 0.009 | 0.000 | 0.124 | — |
| chr15_78944919_A_C | chr15:78944919 | -0.056 | -0.043 | -0.124 | — |
| chr15_78944925_G_T | chr15:78944925 | 0.049 | 0.038 | 0.124 | — |
| chr15_78944936_C_T | chr15:78944936 | -0.072 | -0.020 | 0.067 | — |
| chr15_78944938_A_C | chr15:78944938 | -0.010 | -0.010 | -0.124 | — |
| chr15_78913121_G_T | chr15:78913121 | -0.055 | -0.106 | -0.118 | — |
| chr15_78913156_C_G | chr15:78913156 | 0.068 | 0.098 | 0.118 | — |
| chr15_78913161_A_C | chr15:78913161 | -0.064 | -0.098 | -0.118 | — |
| chr15_78928687_T_G | chr15:78928687 | -0.015 | -0.011 | -0.118 | — |
| chr15_78944931_G_A | chr15:78944931 | 0.069 | 0.015 | 0.022 | — |
| chr15_78913125_T_A | chr15:78913125 | 0.053 | 0.055 | 0.112 | — |
| chr15_78913133_A_C | chr15:78913133 | 0.043 | 0.065 | 0.112 | — |
| chr15_78913142_A_C | chr15:78913142 | -0.065 | -0.116 | -0.112 | — |
| chr15_78913143_G_T | chr15:78913143 | -0.045 | -0.071 | -0.112 | — |
| chr15_78913154_T_G | chr15:78913154 | -0.056 | -0.101 | -0.112 | — |
| chr15_78913162_G_C | chr15:78913162 | -0.056 | -0.068 | -0.112 | — |
| chr15_78913217_G_A | chr15:78913217 | 0.050 | 0.093 | 0.112 | — |
| chr15_78928718_G_C | chr15:78928718 | 0.006 | 0.000 | 0.112 | — |
| chr15_78928796_A_G | chr15:78928796 | 0.000 | -0.023 | -0.112 | — |
| chr15_78944920_C_T | chr15:78944920 | -0.033 | 0.020 | -0.112 | — |
| chr15_78944922_G_A | chr15:78944922 | 0.066 | 0.055 | 0.056 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.