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DEAF1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near DEAF1

chr11:544,219..807,083, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr11_555079_G_C	chr11:555079	-1.000	-0.434	-1.000	0.0020%
chr11_555078_G_C	chr11:555078	-1.000	-0.433	-1.000	0.0046%
chr11_555078_G_T	chr11:555078	-1.000	-0.417	-1.000	<0.001%
chr11_555081_G_A	chr11:555081	-1.000	-0.302	-1.000	0.0020%
chr11_559937_T_A	chr11:559937	1.000	1.000	0.889	<0.001%
chr11_560482_C_T	chr11:560482	1.000	1.000	0.850	0.0033%
chr11_559877_C_T	chr11:559877	-0.738	-1.000	-1.000	0.011%
chr11_553619_G_T	chr11:553619	0.837	1.000	1.000	<0.001%
chr11_559825_T_C	chr11:559825	0.777	1.000	1.000	<0.001%
chr11_554926_G_C	chr11:554926	-0.389	-0.263	-1.000	<0.001%
chr11_555080_G_C	chr11:555080	-0.690	-0.151	-1.000	<0.001%
chr11_561199_G_T	chr11:561199	0.101	0.142	1.000	0.0033%
chr11_553518_A_G	chr11:553518	-0.390	-0.545	-1.000	0.0013%
chr11_551758_G_C	chr11:551758	0.658	0.291	0.817	<0.001%
chr11_555080_G_A	chr11:555080	-0.634	-0.134	-0.842	<0.001%
chr11_561153_G_T	chr11:561153	0.136	0.176	1.000	0.015%
chr11_561205_G_T	chr11:561205	0.107	0.129	0.987	<0.001%
chr11_560808_G_T	chr11:560808	0.181	0.445	0.980	<0.001%
chr11_554923_C_T	chr11:554923	0.225	0.246	0.948	<0.001%
chr11_561210_C_T	chr11:561210	0.029	0.128	0.948	<0.001%
chr11_554923_C_A	chr11:554923	0.252	0.234	0.922	0.020%
chr11_561230_G_T	chr11:561230	0.031	0.124	0.922	<0.001%
chr11_560475_G_C	chr11:560475	-0.569	-0.990	-0.261	<0.001%
chr11_561215_C_A	chr11:561215	0.082	0.149	0.902	0.0086%
chr11_551112_C_T	chr11:551112	0.089	0.202	0.876	0.0013%
chr11_561231_C_T	chr11:561231	0.039	0.129	0.876	<0.001%
chr11_560810_C_G	chr11:560810	-0.548	-0.133	-0.784	0.0017%
chr11_559830_G_C	chr11:559830	0.546	0.920	0.850	<0.001%
chr11_560485_C_T	chr11:560485	0.540	0.185	0.641	0.0013%
chr11_560875_A_G	chr11:560875	-0.536	-0.183	-0.804	0.0048%
chr11_561170_G_A	chr11:561170	0.025	0.100	0.843	<0.001%
chr11_559878_G_A	chr11:559878	-0.388	-0.636	-0.824	0.0020%
chr11_560842_G_A	chr11:560842	0.363	0.309	0.824	<0.001%
chr11_560720_C_T	chr11:560720	-0.515	-0.289	-0.598	0.0013%
chr11_561158_T_C	chr11:561158	-0.148	-0.077	-0.810	0.0099%
chr11_554937_C_T	chr11:554937	0.223	0.200	0.794	<0.001%
chr11_551122_C_T	chr11:551122	0.068	0.150	0.791	<0.001%
chr11_561221_T_G	chr11:561221	-0.021	-0.111	-0.778	<0.001%
chr11_560997_G_A	chr11:560997	0.219	0.129	0.771	<0.001%
chr11_559787_T_G	chr11:559787	0.478	0.482	0.719	<0.001%
chr11_561190_C_T	chr11:561190	0.025	0.090	0.758	0.0066%
chr11_554947_C_T	chr11:554947	0.274	0.145	0.752	<0.001%
chr11_554999_T_A	chr11:554999	0.289	0.094	0.752	0.0066%
chr11_561149_C_T	chr11:561149	0.103	0.089	0.752	0.0040%
chr11_561194_C_T	chr11:561194	0.019	0.103	0.745	<0.001%
chr11_555033_A_C	chr11:555033	-0.108	-0.107	-0.742	0.0033%
chr11_551116_C_T	chr11:551116	0.091	0.160	0.739	<0.001%
chr11_560843_G_C	chr11:560843	0.276	0.350	0.739	0.054%
chr11_561206_G_A	chr11:561206	0.019	0.064	0.739	<0.001%
chr11_559844_C_T	chr11:559844	0.464	0.974	0.654	0.0020%
chr11_560835_T_G	chr11:560835	-0.260	-0.286	-0.716	0.0037%
chr11_560717_T_A	chr11:560717	-0.449	-0.340	-0.654	<0.001%
chr11_561175_A_C	chr11:561175	-0.031	-0.065	-0.712	<0.001%
chr11_559762_A_G	chr11:559762	-0.406	-0.805	-0.706	<0.001%
chr11_560427_G_A	chr11:560427	-0.445	-0.540	-0.497	0.0013%
chr11_553619_G_A	chr11:553619	0.392	0.510	0.699	0.0053%
chr11_559797_C_T	chr11:559797	-0.441	-0.578	-0.562	0.035%
chr11_560738_C_T	chr11:560738	-0.441	-0.129	-0.229	<0.001%
chr11_561262_A_G	chr11:561262	-0.039	-0.074	-0.699	<0.001%
chr11_553517_G_C	chr11:553517	0.267	0.302	0.693	<0.001%
chr11_553593_G_T	chr11:553593	0.351	0.439	0.693	0.012%
chr11_554919_C_T	chr11:554919	0.156	0.207	0.686	<0.001%
chr11_560843_G_T	chr11:560843	0.210	0.299	0.686	<0.001%
chr11_561226_G_T	chr11:561226	-0.039	0.104	0.686	0.0099%
chr11_561232_G_A	chr11:561232	0.035	0.065	0.686	<0.001%
chr11_559851_C_T	chr11:559851	-0.429	-0.581	-0.562	0.0033%
chr11_555115_G_T	chr11:555115	0.424	0.034	0.297	<0.001%
chr11_561184_C_T	chr11:561184	0.037	0.095	0.667	0.0059%
chr11_560999_C_T	chr11:560999	0.157	0.110	0.660	<0.001%
chr11_561160_C_T	chr11:561160	-0.023	0.088	0.660	<0.001%
chr11_551115_C_T	chr11:551115	0.075	0.133	0.650	0.0039%
chr11_560519_G_A	chr11:560519	-0.408	-0.709	-0.340	<0.001%
chr11_561228_C_T	chr11:561228	0.000	0.087	0.647	<0.001%
chr11_553571_C_T	chr11:553571	0.335	0.390	0.641	<0.001%
chr11_553597_C_T	chr11:553597	0.402	0.508	0.641	0.0020%
chr11_559882_C_G	chr11:559882	0.402	0.450	0.549	<0.001%
chr11_560752_G_A	chr11:560752	0.037	0.149	0.634	0.0020%
chr11_560848_T_G	chr11:560848	-0.322	-0.204	-0.631	0.0068%
chr11_559908_C_T	chr11:559908	-0.239	-0.377	-0.627	0.015%
chr11_553623_C_T	chr11:553623	-0.394	-0.474	-0.601	0.0099%
chr11_554959_C_T	chr11:554959	0.163	0.151	0.624	0.0046%
chr11_553516_G_A	chr11:553516	0.248	0.369	0.621	<0.001%
chr11_553553_G_A	chr11:553553	-0.277	-0.361	-0.621	<0.001%
chr11_561153_G_A	chr11:561153	0.095	0.097	0.621	<0.001%
chr11_560281_G_A	chr11:560281	0.390	0.569	0.392	0.0013%
chr11_559831_C_T	chr11:559831	0.169	0.527	0.614	0.0013%
chr11_560845_G_A	chr11:560845	0.194	0.256	0.614	0.0013%
chr11_560979_G_A	chr11:560979	0.388	0.134	0.614	0.013%
chr11_561021_G_A	chr11:561021	0.101	0.043	0.601	0.0093%
chr11_560447_C_T	chr11:560447	-0.375	-0.716	-0.575	<0.001%
chr11_560982_G_A	chr11:560982	0.336	0.090	0.595	0.013%
chr11_559850_C_T	chr11:559850	-0.361	-0.550	-0.588	0.0033%
chr11_561008_G_A	chr11:561008	0.330	0.089	0.588	0.0046%
chr11_559901_A_T	chr11:559901	0.367	0.498	0.458	0.0033%
chr11_561200_G_A	chr11:561200	-0.006	0.079	0.582	0.0026%
chr11_561341_G_A	chr11:561341	0.367	0.404	0.301	<0.001%
chr11_561185_C_T	chr11:561185	0.025	0.069	0.569	0.0013%
chr11_561186_C_T	chr11:561186	-0.004	0.059	0.569	<0.001%
chr11_561246_C_T	chr11:561246	0.029	0.058	0.569	0.0013%
chr11_553442_G_A	chr11:553442	0.218	0.286	0.562	0.0026%
chr11_554918_C_T	chr11:554918	0.197	0.161	0.562	<0.001%
chr11_559796_G_A	chr11:559796	0.322	0.521	0.562	0.0013%
chr11_561009_G_A	chr11:561009	0.355	0.107	0.418	0.0013%
chr11_561188_G_A	chr11:561188	0.029	0.073	0.562	0.0013%
chr11_559809_G_A	chr11:559809	-0.353	-0.444	-0.405	0.0013%
chr11_561010_G_A	chr11:561010	0.353	0.102	0.542	<0.001%
chr11_555114_G_C	chr11:555114	0.325	-0.017	0.557	0.0014%
chr11_553454_G_T	chr11:553454	0.269	0.427	0.556	<0.001%
chr11_560474_C_A	chr11:560474	-0.351	-0.486	-0.183	<0.001%
chr11_560837_G_A	chr11:560837	0.301	0.286	0.556	<0.001%
chr11_559773_C_A	chr11:559773	-0.336	-0.572	-0.549	0.308%
chr11_560970_G_A	chr11:560970	0.175	0.096	0.549	<0.001%
chr11_561004_G_T	chr11:561004	0.165	0.078	0.549	<0.001%
chr11_561278_C_T	chr11:561278	0.012	0.069	0.549	0.028%
chr11_560981_G_A	chr11:560981	0.342	0.089	0.366	0.014%
chr11_554927_C_G	chr11:554927	0.210	0.139	0.539	0.0026%
chr11_554947_C_G	chr11:554947	0.340	0.097	0.402	<0.001%
chr11_561040_C_T	chr11:561040	0.118	0.057	0.536	0.0013%
chr11_561097_G_A	chr11:561097	0.103	0.067	0.536	0.0013%
chr11_561269_A_G	chr11:561269	0.064	-0.015	-0.536	<0.001%
chr11_551104_T_C	chr11:551104	-0.085	-0.087	-0.529	<0.001%
chr11_554950_C_G	chr11:554950	0.334	0.085	0.369	<0.001%
chr11_560469_C_T	chr11:560469	-0.334	-0.709	-0.340	<0.001%
chr11_560748_G_A	chr11:560748	0.252	0.221	0.529	<0.001%
chr11_561007_C_T	chr11:561007	0.021	0.077	0.529	0.0013%
chr11_561042_C_T	chr11:561042	0.072	0.062	0.529	0.0013%
chr11_561069_G_A	chr11:561069	0.087	0.056	0.529	<0.001%
chr11_555125_G_A	chr11:555125	0.332	0.051	0.495	<0.001%
chr11_554967_C_T	chr11:554967	0.188	0.090	0.523	<0.001%
chr11_559857_T_G	chr11:559857	-0.330	-0.470	-0.366	<0.001%
chr11_560282_G_C	chr11:560282	0.252	0.150	0.523	0.0026%
chr11_553542_T_G	chr11:553542	-0.292	-0.455	-0.510	0.0033%
chr11_560284_G_A	chr11:560284	0.186	0.115	0.510	0.0039%
chr11_560805_G_C	chr11:560805	0.202	0.144	0.510	<0.001%
chr11_560973_G_A	chr11:560973	0.136	0.098	0.510	0.0027%
chr11_561027_C_T	chr11:561027	0.058	0.071	0.510	0.017%
chr11_553545_G_A	chr11:553545	-0.242	-0.342	-0.503	<0.001%
chr11_561026_G_A	chr11:561026	0.016	0.054	0.503	2.40%
chr11_551365_C_T	chr11:551365	0.059	0.097	0.497	0.014%
chr11_559979_A_C	chr11:559979	0.313	0.470	0.353	0.0013%
chr11_561076_G_T	chr11:561076	0.021	0.064	0.497	0.0020%
chr11_544243_G_A	chr11:544243	0.029	0.168	0.490	<0.001%
chr11_560831_T_G	chr11:560831	-0.309	-0.115	-0.255	0.027%
chr11_561068_C_T	chr11:561068	0.006	0.071	0.490	2.81%
chr11_559880_C_T	chr11:559880	0.035	0.035	0.484	<0.001%
chr11_560970_G_T	chr11:560970	0.136	0.072	0.484	<0.001%
chr11_561145_G_A	chr11:561145	0.004	0.058	0.484	0.0046%
chr11_559783_A_G	chr11:559783	-0.301	-0.403	-0.444	0.011%
chr11_561019_C_T	chr11:561019	0.062	0.073	0.477	0.0033%
chr11_551368_C_G	chr11:551368	0.073	0.105	0.474	0.0013%
chr11_553543_C_T	chr11:553543	-0.254	-0.382	-0.471	0.0033%
chr11_559795_C_T	chr11:559795	-0.297	-0.466	-0.392	0.029%
chr11_555030_G_A	chr11:555030	-0.007	-0.089	-0.467	0.0086%
chr11_555055_G_C	chr11:555055	-0.293	-0.073	-0.373	0.0020%
chr11_560974_C_T	chr11:560974	0.124	0.050	0.461	<0.001%
chr11_560216_A_G	chr11:560216	0.252	0.217	0.458	<0.001%
chr11_561070_G_A	chr11:561070	0.115	0.023	0.458	<0.001%
chr11_561261_C_T	chr11:561261	0.033	0.077	0.458	<0.001%
chr11_555094_C_G	chr11:555094	-0.288	-0.015	-0.145	<0.001%
chr11_560522_C_A	chr11:560522	0.285	0.423	0.059	<0.001%
chr11_560606_G_C	chr11:560606	0.285	0.122	-0.088	<0.001%
chr11_553443_G_A	chr11:553443	0.147	0.177	0.444	0.0026%
chr11_560257_G_C	chr11:560257	0.157	0.166	0.444	0.0039%
chr11_560966_C_A	chr11:560966	0.186	0.075	0.444	0.0027%
chr11_551348_C_A	chr11:551348	0.091	0.072	0.441	<0.001%
chr11_560964_T_G	chr11:560964	-0.278	-0.059	-0.307	<0.001%
chr11_561012_C_T	chr11:561012	0.235	0.093	0.441	0.0053%
chr11_551117_C_T	chr11:551117	0.067	0.097	0.438	<0.001%
chr11_561163_C_T	chr11:561163	-0.006	0.046	0.438	0.0013%
chr11_561177_G_T	chr11:561177	0.029	0.088	0.438	<0.001%
chr11_560960_C_T	chr11:560960	0.159	0.073	0.431	0.0100%
chr11_560975_G_T	chr11:560975	0.072	0.078	0.431	0.099%
chr11_561006_G_A	chr11:561006	0.161	0.089	0.431	0.0020%
chr11_560219_A_T	chr11:560219	0.268	0.348	0.235	0.016%
chr11_561049_T_G	chr11:561049	-0.107	-0.046	-0.425	<0.001%
chr11_561096_C_T	chr11:561096	0.049	0.042	0.425	<0.001%
chr11_560664_A_G	chr11:560664	0.037	0.055	-0.418	<0.001%
chr11_560880_G_A	chr11:560880	0.056	0.116	0.412	0.096%
chr11_560971_C_T	chr11:560971	0.120	0.073	0.412	<0.001%
chr11_560975_G_A	chr11:560975	0.085	0.078	0.412	<0.001%
chr11_551347_C_A	chr11:551347	0.042	0.086	0.408	<0.001%
chr11_555071_G_A	chr11:555071	-0.209	-0.050	-0.408	0.0027%
chr11_560974_C_A	chr11:560974	0.043	0.044	0.408	0.0033%
chr11_561029_C_T	chr11:561029	0.091	0.050	0.405	0.0053%
chr11_561054_G_A	chr11:561054	0.080	0.049	0.405	0.0099%
chr11_561256_G_A	chr11:561256	-0.008	0.064	0.405	0.024%
chr11_554971_C_T	chr11:554971	0.148	0.077	0.404	<0.001%
chr11_551347_C_G	chr11:551347	0.039	0.073	0.402	0.0013%
chr11_560228_G_A	chr11:560228	0.254	0.348	0.327	<0.001%
chr11_561032_A_G	chr11:561032	-0.085	-0.062	-0.399	<0.001%
chr11_560795_T_C	chr11:560795	0.247	0.061	0.065	0.0027%
chr11_561259_C_T	chr11:561259	0.029	0.060	0.392	<0.001%
chr11_561271_G_A	chr11:561271	0.041	0.089	0.392	<0.001%
chr11_560991_T_C	chr11:560991	-0.095	-0.038	-0.389	0.0040%
chr11_554951_C_T	chr11:554951	0.133	0.098	0.386	0.0039%
chr11_561146_C_T	chr11:561146	0.052	0.058	0.386	<0.001%
chr11_561349_G_C	chr11:561349	-0.243	-0.182	-0.065	<0.001%
chr11_554903_A_G	chr11:554903	0.139	0.047	0.382	0.0040%
chr11_555124_G_C	chr11:555124	0.213	0.025	0.382	0.063%
chr11_559836_G_A	chr11:559836	0.237	0.454	0.379	0.0020%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.