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FAM20C
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near FAM20C
chr7:92,570..360,772, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr7_142483_A_T | chr7:142483 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_142486_G_C | chr7:142486 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr7_142486_G_A | chr7:142486 | -1.000 | -1.000 | -1.000 | 0.190% |
| chr7_142430_G_A | chr7:142430 | 1.000 | 1.000 | 1.000 | 0.0020% |
| chr7_142482_C_G | chr7:142482 | -1.000 | -1.000 | -1.000 | 0.0013% |
| chr7_120805_C_A | chr7:120805 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr7_150177_G_A | chr7:150177 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr7_142479_G_A | chr7:142479 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr7_142436_G_A | chr7:142436 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr7_120806_C_G | chr7:120806 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr7_142490_A_C | chr7:142490 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_149407_C_G | chr7:149407 | 0.414 | 0.367 | 1.000 | <0.001% |
| chr7_142306_G_A | chr7:142306 | 1.000 | 0.006 | 0.778 | <0.001% |
| chr7_120784_A_G | chr7:120784 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_150860_C_A | chr7:150860 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr7_150875_G_A | chr7:150875 | 1.000 | 1.000 | 1.000 | 0.840% |
| chr7_120854_C_T | chr7:120854 | -1.000 | -1.000 | -1.000 | 0.0020% |
| chr7_120773_G_C | chr7:120773 | -1.000 | -0.984 | -1.000 | 0.0033% |
| chr7_191983_G_A | chr7:191983 | 0.258 | 0.333 | 1.000 | <0.001% |
| chr7_150854_T_G | chr7:150854 | -1.000 | -1.000 | -1.000 | 0.0013% |
| chr7_142404_C_T | chr7:142404 | -1.000 | -1.000 | -0.425 | 0.0013% |
| chr7_120863_G_A | chr7:120863 | 1.000 | 0.275 | 0.980 | <0.001% |
| chr7_149289_G_C | chr7:149289 | 0.503 | 0.118 | 1.000 | <0.001% |
| chr7_149292_C_G | chr7:149292 | 0.425 | 0.026 | 1.000 | <0.001% |
| chr7_150857_G_C | chr7:150857 | -0.963 | -1.000 | -1.000 | <0.001% |
| chr7_120774_G_C | chr7:120774 | -0.981 | -0.986 | -1.000 | <0.001% |
| chr7_120826_G_A | chr7:120826 | 0.977 | 0.843 | 1.000 | <0.001% |
| chr7_191979_G_A | chr7:191979 | 0.245 | 0.307 | 1.000 | <0.001% |
| chr7_149288_T_C | chr7:149288 | 0.524 | 0.083 | 1.000 | <0.001% |
| chr7_120827_G_A | chr7:120827 | 0.953 | 0.957 | 1.000 | 0.0039% |
| chr7_142505_G_A | chr7:142505 | 0.932 | 0.994 | 0.588 | 0.0013% |
| chr7_120782_C_T | chr7:120782 | -0.855 | -0.738 | -1.000 | <0.001% |
| chr7_120830_T_C | chr7:120830 | 0.892 | 0.837 | 0.889 | 0.0013% |
| chr7_191987_G_A | chr7:191987 | 0.261 | 0.193 | 1.000 | 0.0018% |
| chr7_142477_G_T | chr7:142477 | -0.870 | -1.000 | -0.660 | <0.001% |
| chr7_150203_A_C | chr7:150203 | -0.868 | -1.000 | -1.000 | 0.0013% |
| chr7_191983_G_T | chr7:191983 | 0.193 | 0.278 | 1.000 | 0.021% |
| chr7_149406_G_T | chr7:149406 | 0.511 | 0.524 | 1.000 | 0.0020% |
| chr7_142494_C_T | chr7:142494 | -0.829 | -0.990 | -0.562 | 0.0026% |
| chr7_191986_G_A | chr7:191986 | 0.252 | 0.166 | 1.000 | 0.062% |
| chr7_120796_T_C | chr7:120796 | -0.765 | -0.728 | -0.935 | <0.001% |
| chr7_191982_G_T | chr7:191982 | 0.123 | 0.239 | 1.000 | 0.011% |
| chr7_120802_G_A | chr7:120802 | -0.748 | -0.725 | -0.850 | 0.0046% |
| chr7_150894_A_G | chr7:150894 | 0.491 | 0.748 | 1.000 | 0.0026% |
| chr7_171694_C_T | chr7:171694 | 0.724 | 0.758 | 0.912 | 0.0020% |
| chr7_142553_T_A | chr7:142553 | -0.720 | -0.776 | -0.471 | <0.001% |
| chr7_120846_A_C | chr7:120846 | -0.719 | -0.647 | -1.000 | 0.283% |
| chr7_191985_G_C | chr7:191985 | 0.314 | 0.080 | 1.000 | 0.023% |
| chr7_139654_G_A | chr7:139654 | 0.400 | 0.859 | 1.000 | 0.075% |
| chr7_142475_A_G | chr7:142475 | -0.699 | -0.847 | -0.373 | <0.001% |
| chr7_150935_G_A | chr7:150935 | -0.685 | -1.000 | -0.850 | 0.0013% |
| chr7_191983_G_C | chr7:191983 | 0.151 | 0.222 | 1.000 | <0.001% |
| chr7_120844_G_A | chr7:120844 | -0.675 | -0.609 | -1.000 | <0.001% |
| chr7_150908_T_C | chr7:150908 | -0.674 | -1.000 | -1.000 | 0.0013% |
| chr7_171695_G_T | chr7:171695 | 0.669 | 0.637 | 1.000 | 0.0066% |
| chr7_191982_G_C | chr7:191982 | 0.128 | 0.244 | 1.000 | 0.0079% |
| chr7_149409_C_A | chr7:149409 | 0.410 | 0.383 | 1.000 | <0.001% |
| chr7_150194_C_T | chr7:150194 | -0.414 | -0.722 | -1.000 | 0.0013% |
| chr7_142582_T_A | chr7:142582 | 0.649 | 0.665 | 0.399 | 0.0013% |
| chr7_142554_C_T | chr7:142554 | -0.643 | -0.780 | -0.490 | 0.0026% |
| chr7_150253_A_G | chr7:150253 | -0.635 | -0.783 | -0.732 | 3.50% |
| chr7_142471_G_A | chr7:142471 | -0.625 | -0.725 | -0.464 | 0.0026% |
| chr7_142585_T_C | chr7:142585 | -0.623 | -0.639 | -0.451 | 0.0013% |
| chr7_149163_C_T | chr7:149163 | 0.093 | -0.006 | 0.987 | <0.001% |
| chr7_149164_G_A | chr7:149164 | 0.276 | 0.198 | 0.980 | 0.0020% |
| chr7_149363_G_C | chr7:149363 | -0.256 | -0.233 | -0.980 | <0.001% |
| chr7_150838_G_C | chr7:150838 | 0.619 | 0.965 | 0.569 | <0.001% |
| chr7_149286_C_A | chr7:149286 | 0.231 | 0.169 | 0.967 | 0.0020% |
| chr7_142441_C_T | chr7:142441 | -0.606 | -0.546 | -0.373 | 0.0026% |
| chr7_191986_G_C | chr7:191986 | 0.229 | 0.105 | 0.958 | 0.067% |
| chr7_142617_T_C | chr7:142617 | 0.598 | 0.655 | 0.484 | 1.63% |
| chr7_142396_T_A | chr7:142396 | -0.596 | -0.658 | -0.386 | <0.001% |
| chr7_149400_T_C | chr7:149400 | 0.258 | 0.342 | 0.941 | <0.001% |
| chr7_150996_A_G | chr7:150996 | -0.590 | -0.987 | -0.523 | <0.001% |
| chr7_150165_C_G | chr7:150165 | -0.495 | -0.687 | -0.915 | 0.0013% |
| chr7_139658_G_T | chr7:139658 | 0.246 | 0.633 | 0.889 | 0.0046% |
| chr7_142591_T_C | chr7:142591 | -0.561 | -0.629 | -0.333 | <0.001% |
| chr7_149213_C_T | chr7:149213 | 0.227 | 0.339 | 0.889 | 0.106% |
| chr7_150897_C_T | chr7:150897 | -0.561 | -1.000 | -0.745 | <0.001% |
| chr7_150877_C_T | chr7:150877 | 0.559 | 0.958 | 0.614 | 0.605% |
| chr7_150917_C_T | chr7:150917 | -0.557 | -1.000 | -0.856 | <0.001% |
| chr7_149408_A_G | chr7:149408 | 0.340 | 0.217 | 0.876 | 0.0059% |
| chr7_191987_G_T | chr7:191987 | 0.124 | 0.105 | 0.876 | 0.071% |
| chr7_150978_A_T | chr7:150978 | 0.546 | 1.000 | 0.621 | 0.0092% |
| chr7_150157_G_T | chr7:150157 | -0.518 | -0.645 | -0.850 | <0.001% |
| chr7_191985_G_A | chr7:191985 | 0.121 | 0.067 | 0.846 | 0.0063% |
| chr7_142448_G_A | chr7:142448 | -0.530 | -0.492 | -0.379 | 0.0072% |
| chr7_150975_T_C | chr7:150975 | 0.526 | 0.965 | 0.634 | 0.0039% |
| chr7_191987_G_C | chr7:191987 | 0.160 | 0.109 | 0.824 | 0.067% |
| chr7_192126_C_T | chr7:192126 | 0.289 | 0.078 | 0.820 | <0.001% |
| chr7_142422_G_A | chr7:142422 | 0.515 | 0.518 | 0.314 | 0.0013% |
| chr7_120867_C_G | chr7:120867 | -0.511 | -0.252 | -0.621 | <0.001% |
| chr7_150242_G_A | chr7:150242 | -0.509 | -0.575 | -0.693 | <0.001% |
| chr7_150229_C_G | chr7:150229 | -0.505 | -0.681 | -0.797 | <0.001% |
| chr7_142655_G_C | chr7:142655 | 0.503 | 0.569 | 0.425 | <0.001% |
| chr7_142508_C_G | chr7:142508 | 0.489 | 0.559 | 0.412 | 0.0013% |
| chr7_149170_G_A | chr7:149170 | 0.109 | 0.032 | 0.771 | 0.054% |
| chr7_150107_G_A | chr7:150107 | -0.371 | -0.511 | -0.771 | <0.001% |
| chr7_149140_G_T | chr7:149140 | -0.237 | -0.150 | -0.765 | <0.001% |
| chr7_149335_C_G | chr7:149335 | 0.231 | 0.198 | 0.758 | <0.001% |
| chr7_120867_C_T | chr7:120867 | -0.474 | -0.161 | -0.595 | <0.001% |
| chr7_120745_A_C | chr7:120745 | -0.472 | -0.484 | -0.634 | <0.001% |
| chr7_149151_G_A | chr7:149151 | -0.470 | -0.204 | -0.725 | 0.0020% |
| chr7_120752_G_T | chr7:120752 | -0.465 | -0.465 | -0.673 | <0.001% |
| chr7_149062_C_A | chr7:149062 | -0.258 | -0.252 | -0.729 | 0.0013% |
| chr7_149162_G_A | chr7:149162 | 0.124 | 0.157 | 0.719 | 0.0020% |
| chr7_142587_G_C | chr7:142587 | -0.452 | -0.473 | -0.261 | 0.0026% |
| chr7_149062_C_T | chr7:149062 | 0.184 | 0.240 | 0.712 | <0.001% |
| chr7_150244_C_T | chr7:150244 | -0.447 | -0.511 | -0.549 | <0.001% |
| chr7_142554_C_A | chr7:142554 | -0.443 | -0.518 | -0.327 | <0.001% |
| chr7_149120_G_C | chr7:149120 | -0.303 | -0.252 | -0.699 | <0.001% |
| chr7_149139_C_A | chr7:149139 | -0.216 | -0.160 | -0.693 | 0.0026% |
| chr7_171738_G_A | chr7:171738 | 0.436 | 0.369 | 0.525 | <0.001% |
| chr7_120857_G_A | chr7:120857 | 0.415 | -0.054 | 0.366 | <0.001% |
| chr7_142453_G_A | chr7:142453 | -0.414 | -0.428 | -0.392 | 0.0033% |
| chr7_142490_A_G | chr7:142490 | -0.412 | -0.521 | -0.294 | <0.001% |
| chr7_120746_G_T | chr7:120746 | -0.411 | -0.327 | -0.471 | <0.001% |
| chr7_191981_G_T | chr7:191981 | 0.066 | 0.130 | 0.650 | 0.0012% |
| chr7_150203_A_G | chr7:150203 | -0.404 | -0.521 | -0.418 | 0.0053% |
| chr7_139821_G_A | chr7:139821 | 0.231 | 0.430 | 0.627 | 0.020% |
| chr7_149087_C_T | chr7:149087 | 0.155 | 0.259 | 0.627 | 0.0013% |
| chr7_149130_A_C | chr7:149130 | 0.342 | 0.163 | 0.627 | <0.001% |
| chr7_191974_G_C | chr7:191974 | 0.121 | 0.125 | 0.624 | 0.0096% |
| chr7_191986_G_T | chr7:191986 | 0.093 | 0.063 | 0.624 | 0.0018% |
| chr7_120716_G_C | chr7:120716 | -0.389 | -0.304 | -0.490 | <0.001% |
| chr7_171704_G_A | chr7:171704 | 0.384 | 0.385 | 0.616 | 0.020% |
| chr7_149118_G_T | chr7:149118 | -0.324 | -0.182 | -0.614 | 0.0013% |
| chr7_149270_C_T | chr7:149270 | -0.214 | -0.217 | -0.614 | 0.023% |
| chr7_149372_G_C | chr7:149372 | 0.332 | 0.265 | 0.614 | <0.001% |
| chr7_120916_G_T | chr7:120916 | 0.387 | 0.358 | 0.399 | 0.0026% |
| chr7_191974_G_A | chr7:191974 | 0.097 | 0.078 | 0.605 | 0.0087% |
| chr7_149355_T_G | chr7:149355 | -0.082 | -0.061 | 0.601 | <0.001% |
| chr7_142383_A_G | chr7:142383 | -0.375 | -0.613 | -0.327 | <0.001% |
| chr7_171692_G_C | chr7:171692 | -0.302 | -0.302 | -0.592 | <0.001% |
| chr7_120704_G_A | chr7:120704 | -0.372 | -0.319 | -0.418 | 0.019% |
| chr7_142507_C_G | chr7:142507 | 0.371 | 0.457 | 0.399 | <0.001% |
| chr7_149234_G_C | chr7:149234 | 0.256 | 0.137 | 0.588 | <0.001% |
| chr7_142341_A_G | chr7:142341 | -0.369 | -0.256 | -0.203 | <0.001% |
| chr7_150965_G_A | chr7:150965 | -0.363 | -0.735 | -0.510 | 0.039% |
| chr7_120741_G_A | chr7:120741 | 0.360 | 0.323 | 0.458 | 0.0026% |
| chr7_149041_G_C | chr7:149041 | 0.254 | 0.137 | 0.569 | 0.0026% |
| chr7_142316_C_G | chr7:142316 | 0.357 | 0.479 | 0.392 | 0.0020% |
| chr7_120729_C_T | chr7:120729 | -0.355 | -0.404 | -0.490 | <0.001% |
| chr7_149037_G_T | chr7:149037 | -0.082 | -0.115 | -0.562 | 0.0013% |
| chr7_149137_G_A | chr7:149137 | 0.212 | 0.141 | 0.562 | 0.0020% |
| chr7_149380_C_T | chr7:149380 | 0.140 | 0.192 | 0.562 | 0.0013% |
| chr7_150161_C_T | chr7:150161 | -0.353 | -0.403 | -0.510 | 0.018% |
| chr7_142539_A_G | chr7:142539 | 0.351 | 0.377 | 0.196 | <0.001% |
| chr7_142446_C_T | chr7:142446 | -0.348 | -0.157 | -0.157 | <0.001% |
| chr7_150178_C_T | chr7:150178 | -0.245 | -0.300 | -0.549 | <0.001% |
| chr7_150182_A_G | chr7:150182 | 0.299 | 0.355 | 0.549 | 0.0013% |
| chr7_150823_T_A | chr7:150823 | 0.346 | 0.601 | 0.242 | <0.001% |
| chr7_120690_A_T | chr7:120690 | -0.343 | -0.382 | -0.542 | <0.001% |
| chr7_142411_C_T | chr7:142411 | -0.002 | 0.316 | 0.542 | 0.0072% |
| chr7_149093_C_T | chr7:149093 | 0.252 | 0.208 | 0.542 | 0.0033% |
| chr7_150952_G_C | chr7:150952 | -0.342 | -0.489 | -0.373 | <0.001% |
| chr7_142514_C_T | chr7:142514 | -0.340 | -0.358 | -0.275 | <0.001% |
| chr7_192117_G_A | chr7:192117 | 0.157 | 0.050 | 0.539 | <0.001% |
| chr7_149095_A_G | chr7:149095 | 0.227 | 0.157 | 0.536 | 0.0013% |
| chr7_149270_C_G | chr7:149270 | -0.247 | -0.224 | -0.536 | <0.001% |
| chr7_149308_T_C | chr7:149308 | 0.161 | 0.128 | 0.536 | 0.0013% |
| chr7_149399_C_T | chr7:149399 | 0.122 | 0.118 | 0.536 | 0.0013% |
| chr7_142595_C_A | chr7:142595 | -0.336 | -0.307 | -0.137 | 0.0020% |
| chr7_149116_C_T | chr7:149116 | -0.181 | -0.179 | -0.529 | <0.001% |
| chr7_150929_G_A | chr7:150929 | -0.334 | -0.495 | -0.484 | <0.001% |
| chr7_149140_G_A | chr7:149140 | -0.165 | -0.067 | -0.523 | 0.0013% |
| chr7_149201_G_C | chr7:149201 | -0.239 | -0.173 | -0.523 | <0.001% |
| chr7_120838_G_A | chr7:120838 | 0.328 | 0.474 | 0.307 | <0.001% |
| chr7_120876_G_A | chr7:120876 | 0.328 | 0.016 | 0.065 | 0.0020% |
| chr7_120660_G_A | chr7:120660 | 0.326 | 0.351 | 0.418 | 0.527% |
| chr7_142450_G_A | chr7:142450 | -0.326 | -0.355 | -0.340 | 0.0013% |
| chr7_142633_C_T | chr7:142633 | -0.326 | -0.396 | -0.307 | <0.001% |
| chr7_120673_C_G | chr7:120673 | 0.324 | 0.332 | 0.353 | 0.0066% |
| chr7_149115_G_A | chr7:149115 | 0.151 | 0.201 | 0.510 | 0.0026% |
| chr7_149168_G_A | chr7:149168 | -0.054 | 0.026 | 0.510 | <0.001% |
| chr7_191973_G_A | chr7:191973 | 0.077 | 0.161 | 0.510 | 0.0039% |
| chr7_150893_G_T | chr7:150893 | -0.320 | -0.738 | -0.451 | <0.001% |
| chr7_142359_C_T | chr7:142359 | -0.318 | -0.326 | -0.242 | 0.0020% |
| chr7_171704_G_C | chr7:171704 | -0.243 | -0.232 | -0.502 | 0.0013% |
| chr7_149121_C_A | chr7:149121 | -0.225 | -0.080 | -0.497 | 0.0072% |
| chr7_149395_T_C | chr7:149395 | -0.196 | -0.233 | -0.497 | <0.001% |
| chr7_150200_C_G | chr7:150200 | 0.311 | 0.412 | 0.405 | <0.001% |
| chr7_120920_G_A | chr7:120920 | -0.276 | -0.275 | -0.490 | 0.0085% |
| chr7_150307_G_T | chr7:150307 | 0.309 | 0.268 | 0.124 | 0.0026% |
| chr7_192122_C_T | chr7:192122 | 0.027 | 0.081 | 0.490 | 0.023% |
| chr7_150899_G_A | chr7:150899 | -0.307 | -0.636 | -0.248 | <0.001% |
| chr7_142429_G_C | chr7:142429 | -0.305 | -0.195 | 0.052 | <0.001% |
| chr7_191988_G_A | chr7:191988 | 0.092 | -0.007 | 0.480 | <0.001% |
| chr7_192129_C_A | chr7:192129 | -0.004 | 0.069 | 0.474 | <0.001% |
| chr7_149342_A_T | chr7:149342 | -0.169 | -0.217 | -0.471 | <0.001% |
| chr7_150199_G_A | chr7:150199 | -0.241 | -0.326 | -0.471 | 0.0020% |
| chr7_120720_G_C | chr7:120720 | -0.290 | -0.308 | -0.366 | <0.001% |
| chr7_149413_C_G | chr7:149413 | -0.109 | -0.236 | -0.458 | <0.001% |
| chr7_150214_C_T | chr7:150214 | -0.254 | -0.342 | -0.458 | <0.001% |
| chr7_150245_G_A | chr7:150245 | 0.289 | 0.364 | 0.314 | 0.0020% |
| chr7_171678_C_T | chr7:171678 | -0.285 | -0.270 | -0.358 | 0.0026% |
| chr7_149070_A_G | chr7:149070 | 0.173 | 0.051 | 0.451 | <0.001% |
| chr7_120707_G_A | chr7:120707 | 0.216 | 0.265 | 0.444 | 0.0020% |
| chr7_149035_C_T | chr7:149035 | -0.138 | -0.128 | -0.444 | 0.0013% |
| chr7_149294_A_G | chr7:149294 | -0.165 | -0.249 | -0.444 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.