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GABARAP

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near GABARAP

chr17:7,140,007..7,342,449, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr17_7156527_G_T	chr17:7156527	-1.000	-1.000	-1.000	<0.001%
chr17_7156529_C_T	chr17:7156529	-1.000	-1.000	-1.000	<0.001%
chr17_7156488_C_G	chr17:7156488	1.000	1.000	0.850	<0.001%
chr17_7156544_G_A	chr17:7156544	-1.000	-1.000	-1.000	<0.001%
chr17_7156485_T_G	chr17:7156485	-1.000	-1.000	-1.000	<0.001%
chr17_7156441_C_T	chr17:7156441	-1.000	-1.000	-0.941	<0.001%
chr17_7156445_C_G	chr17:7156445	-1.000	-1.000	-0.967	0.0033%
chr17_7156440_T_A	chr17:7156440	-0.998	-1.000	-0.993	<0.001%
chr17_7156547_C_G	chr17:7156547	-0.984	-1.000	-0.667	<0.001%
chr17_7156504_G_A	chr17:7156504	-0.921	-1.000	-0.758	0.0013%
chr17_7156432_G_A	chr17:7156432	0.837	1.000	0.542	<0.001%
chr17_7156488_C_T	chr17:7156488	-0.792	-1.000	-0.641	<0.001%
chr17_7156497_C_T	chr17:7156497	0.730	1.000	0.516	0.0092%
chr17_7156444_C_T	chr17:7156444	-0.703	-1.000	-0.703	<0.001%
chr17_7156442_C_T	chr17:7156442	-0.691	-1.000	-0.654	0.0026%
chr17_7156481_G_C	chr17:7156481	-0.627	-0.984	-0.556	0.0013%
chr17_7156543_C_T	chr17:7156543	-0.612	-0.569	-0.389	0.0020%
chr17_7156567_G_C	chr17:7156567	0.595	0.722	0.163	0.0013%
chr17_7156479_G_A	chr17:7156479	-0.538	-0.732	-0.438	<0.001%
chr17_7165288_C_G	chr17:7165288	-0.452	-0.254	-0.830	<0.001%
chr17_7165288_C_T	chr17:7165288	-0.460	-0.244	-0.820	0.0039%
chr17_7156549_G_A	chr17:7156549	-0.493	-0.636	-0.373	<0.001%
chr17_7156447_C_T	chr17:7156447	-0.486	-0.601	-0.353	<0.001%
chr17_7165293_T_A	chr17:7165293	-0.457	-0.225	-0.699	<0.001%
chr17_7156647_G_A	chr17:7156647	0.420	0.978	0.588	0.0076%
chr17_7156609_C_G	chr17:7156609	-0.419	-0.470	-0.569	<0.001%
chr17_7156663_G_A	chr17:7156663	0.397	0.958	0.516	0.011%
chr17_7156455_C_T	chr17:7156455	0.382	0.454	0.294	0.0013%
chr17_7165295_T_C	chr17:7165295	-0.349	-0.187	-0.510	<0.001%
chr17_7156456_G_A	chr17:7156456	-0.331	-0.431	-0.307	<0.001%
chr17_7165345_T_C	chr17:7165345	0.269	0.281	0.523	<0.001%
chr17_7156456_G_T	chr17:7156456	-0.311	-0.332	-0.261	<0.001%
chr17_7156465_G_A	chr17:7156465	-0.302	-0.326	-0.301	<0.001%
chr17_7156399_T_C	chr17:7156399	0.295	0.447	0.281	<0.001%
chr17_7156550_G_A	chr17:7156550	-0.279	-0.428	-0.281	<0.001%
chr17_7156623_G_T	chr17:7156623	-0.271	-0.415	-0.186	0.990%
chr17_7156610_G_T	chr17:7156610	-0.258	-0.463	-0.235	0.013%
chr17_7156595_C_G	chr17:7156595	0.253	0.345	0.232	<0.001%
chr17_7156661_G_A	chr17:7156661	0.249	0.712	0.356	0.279%
chr17_7165296_T_C	chr17:7165296	-0.237	-0.120	-0.353	0.0066%
chr17_7156610_G_A	chr17:7156610	-0.231	-0.361	-0.203	0.0020%
chr17_7156400_A_G	chr17:7156400	0.227	0.383	0.222	0.0013%
chr17_7156478_T_G	chr17:7156478	-0.220	-0.332	-0.196	<0.001%
chr17_7148063_C_T	chr17:7148063	0.214	0.211	0.196	<0.001%
chr17_7148069_G_A	chr17:7148069	-0.212	-0.150	-0.304	0.0020%
chr17_7156645_G_A	chr17:7156645	0.211	0.617	0.291	0.047%
chr17_7156627_G_C	chr17:7156627	0.210	0.176	0.206	0.0035%
chr17_7156511_G_T	chr17:7156511	-0.204	-0.128	-0.124	<0.001%
chr17_7148152_C_T	chr17:7148152	0.179	0.319	0.322	0.0020%
chr17_7165344_A_G	chr17:7165344	0.166	0.157	0.320	0.031%
chr17_7156642_A_G	chr17:7156642	-0.201	-0.581	-0.219	0.346%
chr17_7156629_G_A	chr17:7156629	0.168	0.588	0.294	0.0023%
chr17_7156425_A_G	chr17:7156425	0.189	0.208	0.229	<0.001%
chr17_7156651_A_G	chr17:7156651	0.162	0.121	-0.016	0.029%
chr17_7165065_C_A	chr17:7165065	-0.113	-0.080	-0.255	<0.001%
chr17_7156639_G_T	chr17:7156639	-0.104	-0.479	-0.222	0.021%
chr17_7148041_C_G	chr17:7148041	0.081	0.086	0.242	<0.001%
chr17_7156658_A_G	chr17:7156658	-0.153	-0.377	-0.098	0.0058%
chr17_7165284_C_G	chr17:7165284	-0.153	-0.065	-0.111	0.0033%
chr17_7165191_C_T	chr17:7165191	0.146	0.070	0.222	0.0020%
chr17_7165318_A_T	chr17:7165318	-0.144	-0.073	-0.222	<0.001%
chr17_7148068_C_T	chr17:7148068	-0.140	-0.102	-0.172	0.0066%
chr17_7156610_G_C	chr17:7156610	-0.139	-0.230	-0.114	0.061%
chr17_7156613_G_T	chr17:7156613	-0.136	-0.291	-0.042	<0.001%
chr17_7156614_G_C	chr17:7156614	-0.132	-0.115	0.154	<0.001%
chr17_7148073_C_T	chr17:7148073	-0.131	-0.158	-0.175	<0.001%
chr17_7165190_C_G	chr17:7165190	0.112	0.013	0.203	<0.001%
chr17_7165260_T_G	chr17:7165260	-0.127	-0.035	0.000	<0.001%
chr17_7165339_A_G	chr17:7165339	0.060	0.058	0.196	0.0039%
chr17_7156374_T_C	chr17:7156374	0.122	0.240	0.078	<0.001%
chr17_7147956_G_A	chr17:7147956	0.007	0.078	-0.193	28.2%
chr17_7171765_T_G	chr17:7171765	0.046	0.053	0.166	—
chr17_7171789_G_C	chr17:7171789	0.067	0.098	0.163	—
chr17_7148018_C_T	chr17:7148018	-0.063	0.019	-0.188	<0.001%
chr17_7148022_A_G	chr17:7148022	0.097	0.139	0.185	0.0013%
chr17_7165139_G_A	chr17:7165139	-0.065	-0.096	-0.183	<0.001%
chr17_7171696_G_A	chr17:7171696	0.085	0.189	0.157	<0.001%
chr17_7148014_G_T	chr17:7148014	0.115	0.227	0.132	<0.001%
chr17_7171786_G_C	chr17:7171786	0.050	0.063	0.154	—
chr17_7156614_G_A	chr17:7156614	-0.106	-0.224	0.016	0.0020%
chr17_7156673_A_G	chr17:7156673	0.021	-0.083	-0.163	6.32%
chr17_7171746_C_G	chr17:7171746	0.040	0.020	0.132	—
chr17_7156601_C_G	chr17:7156601	0.096	0.080	0.013	0.0013%
chr17_7165145_A_G	chr17:7165145	-0.082	-0.077	-0.150	0.0026%
chr17_7171764_T_G	chr17:7171764	0.022	0.021	0.126	—
chr17_7171819_A_C	chr17:7171819	0.060	0.151	0.126	—
chr17_7156615_G_T	chr17:7156615	0.077	0.070	0.144	0.0094%
chr17_7165258_G_T	chr17:7165258	-0.026	-0.027	-0.144	<0.001%
chr17_7171766_T_G	chr17:7171766	0.026	0.013	0.124	—
chr17_7171796_C_A	chr17:7171796	0.057	0.086	0.124	—
chr17_7175351_C_T	chr17:7175351	0.026	0.008	0.124	—
chr17_7175367_T_C	chr17:7175367	-0.015	-0.020	-0.124	—
chr17_7171704_C_G	chr17:7171704	0.034	0.065	0.121	—
chr17_7171745_C_G	chr17:7171745	0.048	0.028	0.121	—
chr17_7171764_T_C	chr17:7171764	0.024	0.011	0.121	—
chr17_7171765_T_A	chr17:7171765	0.045	0.033	0.121	—
chr17_7175347_C_G	chr17:7175347	0.025	0.010	0.118	—
chr17_7175362_C_G	chr17:7175362	0.044	0.011	0.118	—
chr17_7156415_G_A	chr17:7156415	-0.086	-0.160	-0.078	0.589%
chr17_7171765_T_C	chr17:7171765	0.032	0.015	0.115	—
chr17_7171767_T_G	chr17:7171767	0.024	0.013	0.115	—
chr17_7156395_C_T	chr17:7156395	-0.083	-0.038	-0.052	0.0013%
chr17_7171748_C_G	chr17:7171748	0.024	0.019	0.112	<0.001%
chr17_7171780_A_C	chr17:7171780	0.020	-0.014	0.112	—
chr17_7175349_C_T	chr17:7175349	0.031	0.015	0.112	—
chr17_7156641_A_G	chr17:7156641	0.081	-0.070	-0.095	12.3%
chr17_7156657_A_G	chr17:7156657	0.080	0.070	-0.072	0.323%
chr17_7171742_C_G	chr17:7171742	0.022	0.003	0.110	—
chr17_7171763_T_G	chr17:7171763	0.013	0.020	0.110	—
chr17_7171773_T_G	chr17:7171773	0.037	0.008	0.110	—
chr17_7171793_C_G	chr17:7171793	0.052	0.067	0.110	—
chr17_7171810_T_G	chr17:7171810	0.048	0.137	0.110	—
chr17_7165228_C_T	chr17:7165228	0.079	0.032	0.026	<0.001%
chr17_7148029_G_A	chr17:7148029	-0.079	-0.042	-0.121	0.0039%
chr17_7156667_A_G	chr17:7156667	0.078	-0.019	-0.065	0.236%
chr17_7171717_C_G	chr17:7171717	0.041	0.035	0.107	<0.001%
chr17_7171749_C_G	chr17:7171749	0.031	0.000	0.107	—
chr17_7171776_T_G	chr17:7171776	0.016	-0.019	0.107	—
chr17_7171782_A_C	chr17:7171782	0.020	0.003	0.107	—
chr17_7171784_A_C	chr17:7171784	0.033	0.008	0.107	—
chr17_7175257_T_C	chr17:7175257	-0.028	-0.013	-0.107	—
chr17_7175347_C_T	chr17:7175347	0.025	0.010	0.107	0.0021%
chr17_7175349_C_G	chr17:7175349	0.030	0.013	0.107	<0.001%
chr17_7175353_C_T	chr17:7175353	0.026	0.008	0.107	0.0013%
chr17_7156613_G_A	chr17:7156613	-0.056	-0.240	0.046	0.0020%
chr17_7171708_C_G	chr17:7171708	0.056	0.063	0.104	—
chr17_7171766_T_C	chr17:7171766	0.023	0.001	0.104	—
chr17_7165125_G_A	chr17:7165125	-0.008	-0.013	-0.118	<0.001%
chr17_7165381_C_A	chr17:7165381	-0.039	-0.029	-0.118	<0.001%
chr17_7171742_C_A	chr17:7171742	0.021	0.018	0.101	—
chr17_7171766_T_A	chr17:7171766	0.033	0.009	0.101	—
chr17_7171774_T_C	chr17:7171774	0.018	-0.001	0.101	—
chr17_7171774_T_G	chr17:7171774	0.023	-0.001	0.101	—
chr17_7175349_C_A	chr17:7175349	0.030	0.013	0.101	0.0013%
chr17_7175350_A_G	chr17:7175350	0.007	0.015	0.101	—
chr17_7175350_A_T	chr17:7175350	0.021	0.015	0.101	—
chr17_7175351_C_G	chr17:7175351	0.023	0.008	0.101	—
chr17_7148025_C_T	chr17:7148025	-0.074	-0.093	-0.074	<0.001%
chr17_7156555_T_G	chr17:7156555	0.031	0.227	0.056	0.0013%
chr17_7171704_C_A	chr17:7171704	0.045	0.048	0.098	—
chr17_7171745_C_A	chr17:7171745	0.045	0.040	0.098	<0.001%
chr17_7171754_C_G	chr17:7171754	0.011	-0.004	0.098	—
chr17_7171768_T_C	chr17:7171768	0.015	-0.005	0.098	—
chr17_7171776_T_A	chr17:7171776	0.020	-0.009	0.098	—
chr17_7171696_G_T	chr17:7171696	0.057	0.065	0.070	—
chr17_7165090_G_A	chr17:7165090	-0.014	-0.003	-0.111	0.017%
chr17_7171695_A_C	chr17:7171695	0.045	0.030	0.096	—
chr17_7171744_A_T	chr17:7171744	0.029	0.013	0.096	—
chr17_7171810_T_A	chr17:7171810	0.052	0.150	0.096	—
chr17_7175253_A_C	chr17:7175253	-0.016	-0.013	-0.096	—
chr17_7175347_C_A	chr17:7175347	0.020	0.008	0.096	—
chr17_7175348_A_G	chr17:7175348	0.008	0.008	0.096	—
chr17_7175351_C_A	chr17:7175351	0.020	0.008	0.096	—
chr17_7171743_C_A	chr17:7171743	0.030	0.025	0.093	—
chr17_7171760_A_C	chr17:7171760	0.009	-0.008	0.093	—
chr17_7171763_T_C	chr17:7171763	0.011	0.020	0.093	—
chr17_7171767_T_A	chr17:7171767	0.023	0.003	0.093	—
chr17_7171772_T_G	chr17:7171772	0.017	-0.003	0.093	—
chr17_7171775_T_G	chr17:7171775	0.014	0.008	0.093	—
chr17_7165239_G_T	chr17:7165239	0.068	0.061	0.026	<0.001%
chr17_7171746_C_A	chr17:7171746	0.042	0.033	0.090	—
chr17_7171777_A_C	chr17:7171777	0.011	-0.014	0.090	—
chr17_7175261_A_G	chr17:7175261	-0.002	0.005	0.090	—
chr17_7175263_A_G	chr17:7175263	-0.003	0.003	0.090	<0.001%
chr17_7175353_C_G	chr17:7175353	0.020	0.005	0.090	—
chr17_7175355_C_G	chr17:7175355	0.005	0.003	0.090	—
chr17_7171703_T_A	chr17:7171703	0.045	0.043	0.087	—
chr17_7171708_C_A	chr17:7171708	0.043	0.055	0.087	<0.001%
chr17_7171714_C_G	chr17:7171714	0.029	0.040	0.087	—
chr17_7171762_T_G	chr17:7171762	0.010	0.010	0.087	—
chr17_7171767_T_C	chr17:7171767	0.015	-0.003	0.087	—
chr17_7171771_A_C	chr17:7171771	0.009	-0.006	0.087	—
chr17_7171786_G_T	chr17:7171786	0.028	0.021	0.087	—
chr17_7171693_C_T	chr17:7171693	0.043	0.035	0.084	—
chr17_7171716_T_G	chr17:7171716	0.029	0.018	0.084	—
chr17_7171741_C_G	chr17:7171741	0.032	0.018	0.084	—
chr17_7171761_A_G	chr17:7171761	0.009	0.010	0.084	—
chr17_7171764_T_A	chr17:7171764	0.020	0.009	0.084	—
chr17_7171775_T_C	chr17:7171775	0.012	0.000	0.084	—
chr17_7171820_C_A	chr17:7171820	-0.024	-0.096	-0.084	—
chr17_7171828_C_T	chr17:7171828	-0.018	-0.083	-0.084	—
chr17_7175258_C_G	chr17:7175258	0.015	0.003	0.084	—
chr17_7175289_C_A	chr17:7175289	-0.021	-0.005	-0.084	—
chr17_7175364_C_G	chr17:7175364	0.018	0.004	0.084	—
chr17_7148078_C_T	chr17:7148078	-0.061	-0.048	-0.088	<0.001%
chr17_7147930_T_G	chr17:7147930	-0.002	-0.005	0.095	<0.001%
chr17_7165337_C_T	chr17:7165337	-0.060	-0.058	-0.085	<0.001%
chr17_7171702_C_A	chr17:7171702	0.042	0.043	0.081	—
chr17_7171724_G_A	chr17:7171724	-0.022	0.008	-0.081	0.0047%
chr17_7171747_A_G	chr17:7171747	0.004	-0.008	0.081	—
chr17_7171759_T_G	chr17:7171759	0.009	-0.015	0.081	—
chr17_7171762_T_C	chr17:7171762	0.009	0.015	0.081	0.0092%
chr17_7171768_T_G	chr17:7171768	0.016	0.001	0.081	—
chr17_7171772_T_C	chr17:7171772	0.012	0.000	0.081	—
chr17_7171779_T_C	chr17:7171779	0.006	-0.003	0.081	—
chr17_7171792_T_A	chr17:7171792	0.031	-0.006	0.081	—
chr17_7171820_C_T	chr17:7171820	-0.016	-0.093	-0.081	<0.001%
chr17_7156554_G_C	chr17:7156554	-0.059	-0.102	-0.078	0.0026%
chr17_7165319_C_T	chr17:7165319	-0.058	-0.045	-0.059	0.0033%
chr17_7147929_G_C	chr17:7147929	0.028	0.021	0.092	0.337%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.