Home / Gene
GATD1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GATD1
chr11:667,222..877,487, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_679852_A_G | chr11:679852 | 1.000 | 1.000 | 1.000 | — |
| chr11_679690_G_T | chr11:679690 | 1.000 | 1.000 | 1.000 | — |
| chr11_679685_C_G | chr11:679685 | 0.781 | 0.987 | 0.936 | — |
| chr11_679744_G_C | chr11:679744 | 0.674 | 0.733 | 1.000 | — |
| chr11_679860_C_T | chr11:679860 | 0.546 | 0.549 | 0.696 | — |
| chr11_679805_G_C | chr11:679805 | 0.531 | 0.728 | 0.830 | — |
| chr11_679578_C_T | chr11:679578 | 0.518 | 0.791 | 0.924 | — |
| chr11_679810_A_T | chr11:679810 | -0.444 | -0.720 | -0.865 | — |
| chr11_679773_C_A | chr11:679773 | -0.349 | -0.622 | -0.830 | — |
| chr11_679810_A_C | chr11:679810 | -0.368 | -0.610 | -0.743 | — |
| chr11_679703_A_T | chr11:679703 | 0.376 | 0.511 | 0.731 | — |
| chr11_679804_G_C | chr11:679804 | 0.412 | 0.506 | 0.626 | 0.0059% |
| chr11_679806_G_A | chr11:679806 | 0.402 | 0.537 | 0.602 | — |
| chr11_679744_G_A | chr11:679744 | 0.397 | 0.605 | 0.526 | — |
| chr11_679770_G_C | chr11:679770 | -0.365 | -0.622 | -0.696 | — |
| chr11_679876_C_A | chr11:679876 | 0.381 | 0.272 | 0.327 | — |
| chr11_679745_C_T | chr11:679745 | -0.346 | -0.547 | -0.649 | — |
| chr11_679770_G_T | chr11:679770 | -0.337 | -0.559 | -0.649 | — |
| chr11_679805_G_A | chr11:679805 | 0.366 | 0.539 | 0.526 | — |
| chr11_679702_A_C | chr11:679702 | 0.351 | 0.441 | 0.637 | — |
| chr11_679707_G_T | chr11:679707 | 0.359 | 0.539 | 0.591 | — |
| chr11_679806_G_C | chr11:679806 | 0.351 | 0.514 | 0.497 | — |
| chr11_679685_C_A | chr11:679685 | 0.349 | 0.433 | 0.456 | — |
| chr11_679776_T_A | chr11:679776 | -0.339 | -0.451 | -0.608 | — |
| chr11_679779_C_A | chr11:679779 | 0.339 | 0.469 | 0.538 | — |
| chr11_679783_G_C | chr11:679783 | -0.311 | -0.476 | -0.596 | — |
| chr11_679784_A_T | chr11:679784 | -0.328 | -0.516 | -0.596 | — |
| chr11_679773_C_G | chr11:679773 | -0.270 | -0.476 | -0.591 | — |
| chr11_679792_A_G | chr11:679792 | -0.308 | -0.484 | -0.573 | — |
| chr11_679807_G_C | chr11:679807 | -0.323 | -0.501 | -0.544 | — |
| chr11_679785_G_A | chr11:679785 | -0.286 | -0.499 | -0.567 | — |
| chr11_679766_C_A | chr11:679766 | -0.296 | -0.476 | -0.550 | — |
| chr11_679799_C_T | chr11:679799 | -0.248 | -0.343 | -0.544 | — |
| chr11_679706_C_G | chr11:679706 | 0.306 | 0.463 | 0.515 | — |
| chr11_679704_G_C | chr11:679704 | 0.280 | 0.365 | 0.532 | — |
| chr11_679782_C_A | chr11:679782 | 0.296 | 0.446 | 0.444 | — |
| chr11_679683_C_G | chr11:679683 | 0.293 | 0.380 | 0.468 | — |
| chr11_679745_C_G | chr11:679745 | -0.280 | -0.451 | -0.515 | — |
| chr11_679785_G_C | chr11:679785 | -0.253 | -0.448 | -0.509 | — |
| chr11_679789_G_T | chr11:679789 | -0.232 | -0.413 | -0.509 | — |
| chr11_679772_T_A | chr11:679772 | -0.287 | -0.463 | -0.474 | — |
| chr11_679803_G_T | chr11:679803 | 0.286 | 0.395 | 0.398 | — |
| chr11_679810_A_G | chr11:679810 | -0.286 | -0.433 | -0.474 | — |
| chr11_679766_C_G | chr11:679766 | -0.262 | -0.431 | -0.503 | — |
| chr11_679784_A_G | chr11:679784 | -0.257 | -0.368 | -0.503 | — |
| chr11_679778_C_A | chr11:679778 | 0.283 | 0.577 | 0.409 | — |
| chr11_679808_T_C | chr11:679808 | -0.283 | -0.426 | -0.398 | — |
| chr11_679690_G_C | chr11:679690 | 0.281 | 0.426 | 0.427 | — |
| chr11_679768_A_C | chr11:679768 | -0.256 | -0.428 | -0.497 | — |
| chr11_679780_C_G | chr11:679780 | 0.273 | 0.295 | 0.497 | — |
| chr11_679788_C_A | chr11:679788 | -0.245 | -0.433 | -0.497 | — |
| chr11_679788_C_G | chr11:679788 | -0.253 | -0.456 | -0.497 | — |
| chr11_679683_C_T | chr11:679683 | 0.275 | 0.363 | 0.427 | — |
| chr11_679770_G_A | chr11:679770 | -0.272 | -0.461 | -0.468 | — |
| chr11_679703_A_G | chr11:679703 | 0.267 | 0.302 | 0.474 | — |
| chr11_679763_G_C | chr11:679763 | -0.233 | -0.453 | -0.468 | — |
| chr11_679682_G_T | chr11:679682 | -0.177 | -0.244 | -0.462 | — |
| chr11_679793_T_C | chr11:679793 | 0.228 | 0.466 | 0.462 | — |
| chr11_679701_G_C | chr11:679701 | 0.255 | 0.300 | 0.409 | — |
| chr11_679780_C_A | chr11:679780 | 0.248 | 0.227 | 0.439 | — |
| chr11_679892_C_A | chr11:679892 | 0.248 | 0.262 | 0.275 | — |
| chr11_679768_A_G | chr11:679768 | -0.247 | -0.355 | -0.433 | — |
| chr11_679784_A_C | chr11:679784 | -0.247 | -0.401 | -0.392 | — |
| chr11_679771_G_C | chr11:679771 | -0.245 | -0.426 | -0.427 | — |
| chr11_679776_T_C | chr11:679776 | -0.243 | -0.305 | -0.333 | — |
| chr11_679779_C_G | chr11:679779 | 0.243 | 0.312 | 0.427 | — |
| chr11_679862_A_T | chr11:679862 | 0.243 | 0.244 | 0.287 | — |
| chr11_679693_G_A | chr11:679693 | 0.242 | 0.474 | 0.380 | — |
| chr11_679786_G_T | chr11:679786 | -0.200 | -0.368 | -0.427 | — |
| chr11_679748_C_A | chr11:679748 | -0.237 | -0.312 | -0.281 | — |
| chr11_679705_A_C | chr11:679705 | 0.164 | 0.207 | 0.415 | — |
| chr11_679862_A_G | chr11:679862 | 0.235 | 0.217 | 0.316 | — |
| chr11_679772_T_G | chr11:679772 | -0.233 | -0.380 | -0.327 | — |
| chr11_679785_G_T | chr11:679785 | -0.201 | -0.378 | -0.409 | — |
| chr11_679794_C_G | chr11:679794 | -0.230 | -0.332 | -0.409 | — |
| chr11_679702_A_T | chr11:679702 | 0.230 | 0.322 | 0.368 | — |
| chr11_679747_T_C | chr11:679747 | -0.228 | -0.330 | -0.386 | — |
| chr11_679777_G_A | chr11:679777 | -0.195 | -0.340 | -0.404 | — |
| chr11_679790_T_A | chr11:679790 | -0.190 | -0.327 | -0.404 | — |
| chr11_679793_T_A | chr11:679793 | 0.228 | 0.353 | 0.398 | — |
| chr11_679804_G_A | chr11:679804 | 0.228 | 0.310 | 0.368 | — |
| chr11_679818_T_A | chr11:679818 | 0.096 | 0.227 | 0.404 | — |
| chr11_679704_G_T | chr11:679704 | 0.219 | 0.285 | 0.398 | — |
| chr11_679818_T_C | chr11:679818 | 0.116 | 0.224 | 0.398 | <0.001% |
| chr11_679803_G_C | chr11:679803 | 0.222 | 0.290 | 0.310 | — |
| chr11_679870_C_A | chr11:679870 | 0.219 | 0.363 | 0.257 | — |
| chr11_679757_A_T | chr11:679757 | -0.219 | -0.322 | -0.357 | — |
| chr11_679782_C_T | chr11:679782 | 0.219 | 0.330 | 0.351 | 0.0098% |
| chr11_679794_C_T | chr11:679794 | -0.214 | -0.315 | -0.386 | — |
| chr11_679884_C_G | chr11:679884 | 0.218 | 0.244 | 0.234 | — |
| chr11_679759_G_C | chr11:679759 | -0.201 | -0.302 | -0.380 | — |
| chr11_679773_C_T | chr11:679773 | -0.192 | -0.335 | -0.380 | — |
| chr11_679704_G_A | chr11:679704 | 0.194 | 0.272 | 0.374 | — |
| chr11_679742_T_G | chr11:679742 | -0.212 | -0.290 | -0.363 | — |
| chr11_679772_T_C | chr11:679772 | -0.212 | -0.358 | -0.304 | — |
| chr11_679777_G_C | chr11:679777 | -0.200 | -0.330 | -0.374 | — |
| chr11_679766_C_T | chr11:679766 | -0.200 | -0.325 | -0.368 | — |
| chr11_679792_A_T | chr11:679792 | -0.194 | -0.287 | -0.368 | — |
| chr11_679846_C_T | chr11:679846 | -0.130 | -0.169 | -0.368 | — |
| chr11_679807_G_T | chr11:679807 | -0.189 | -0.317 | -0.363 | — |
| chr11_679648_T_G | chr11:679648 | -0.159 | -0.217 | -0.357 | — |
| chr11_679827_A_C | chr11:679827 | 0.140 | 0.229 | 0.357 | — |
| chr11_679841_C_A | chr11:679841 | 0.202 | 0.252 | 0.269 | — |
| chr11_679847_C_G | chr11:679847 | -0.199 | -0.270 | -0.357 | — |
| chr11_679779_C_T | chr11:679779 | 0.200 | 0.244 | 0.351 | — |
| chr11_679862_A_C | chr11:679862 | -0.175 | -0.209 | -0.351 | — |
| chr11_679686_A_T | chr11:679686 | 0.192 | 0.098 | 0.240 | — |
| chr11_679705_A_G | chr11:679705 | 0.114 | 0.207 | 0.339 | — |
| chr11_679687_C_G | chr11:679687 | 0.190 | 0.078 | 0.216 | — |
| chr11_679781_C_G | chr11:679781 | 0.179 | 0.207 | 0.333 | — |
| chr11_679686_A_G | chr11:679686 | 0.187 | 0.048 | 0.257 | — |
| chr11_679789_G_A | chr11:679789 | 0.187 | 0.365 | 0.292 | — |
| chr11_679863_C_A | chr11:679863 | 0.186 | 0.207 | 0.216 | <0.001% |
| chr11_679686_A_C | chr11:679686 | 0.185 | 0.071 | 0.187 | — |
| chr11_679730_A_T | chr11:679730 | 0.161 | 0.252 | 0.327 | — |
| chr11_679775_G_A | chr11:679775 | 0.166 | 0.275 | 0.327 | — |
| chr11_679789_G_C | chr11:679789 | -0.154 | -0.305 | -0.327 | — |
| chr11_679790_T_G | chr11:679790 | -0.144 | -0.277 | -0.327 | — |
| chr11_679794_C_A | chr11:679794 | -0.185 | -0.264 | -0.322 | — |
| chr11_679800_C_A | chr11:679800 | 0.184 | 0.287 | 0.193 | — |
| chr11_679737_A_C | chr11:679737 | 0.164 | 0.254 | 0.322 | — |
| chr11_679783_G_T | chr11:679783 | -0.169 | -0.237 | -0.322 | — |
| chr11_679786_G_A | chr11:679786 | -0.180 | -0.335 | -0.322 | — |
| chr11_679809_C_T | chr11:679809 | -0.156 | -0.224 | -0.322 | — |
| chr11_679814_T_A | chr11:679814 | -0.174 | -0.244 | -0.322 | — |
| chr11_679860_C_G | chr11:679860 | -0.169 | -0.196 | -0.322 | — |
| chr11_679732_A_C | chr11:679732 | 0.179 | 0.214 | 0.269 | — |
| chr11_679687_C_A | chr11:679687 | 0.175 | 0.081 | 0.146 | — |
| chr11_679767_A_T | chr11:679767 | -0.175 | -0.345 | -0.304 | — |
| chr11_679769_A_T | chr11:679769 | -0.154 | -0.302 | -0.310 | — |
| chr11_679858_G_C | chr11:679858 | -0.151 | -0.239 | -0.310 | — |
| chr11_679692_G_C | chr11:679692 | -0.132 | -0.219 | -0.304 | — |
| chr11_679707_G_C | chr11:679707 | 0.144 | 0.262 | 0.304 | — |
| chr11_679798_C_G | chr11:679798 | 0.172 | 0.247 | 0.251 | — |
| chr11_679801_G_C | chr11:679801 | 0.172 | 0.242 | 0.304 | — |
| chr11_679835_A_T | chr11:679835 | 0.139 | 0.156 | 0.304 | — |
| chr11_679861_C_A | chr11:679861 | 0.172 | 0.156 | 0.164 | <0.001% |
| chr11_679729_G_T | chr11:679729 | -0.159 | -0.257 | -0.298 | — |
| chr11_679811_C_G | chr11:679811 | 0.159 | 0.239 | 0.298 | — |
| chr11_679829_A_T | chr11:679829 | 0.136 | 0.171 | 0.298 | — |
| chr11_679864_G_C | chr11:679864 | -0.162 | -0.209 | -0.298 | — |
| chr11_679753_G_C | chr11:679753 | 0.167 | 0.237 | 0.263 | — |
| chr11_679807_G_A | chr11:679807 | -0.166 | -0.267 | -0.292 | <0.001% |
| chr11_679632_A_T | chr11:679632 | 0.113 | 0.171 | 0.292 | — |
| chr11_679690_G_A | chr11:679690 | 0.166 | 0.249 | 0.228 | — |
| chr11_679761_T_G | chr11:679761 | 0.071 | 0.126 | 0.292 | — |
| chr11_679768_A_T | chr11:679768 | -0.156 | -0.252 | -0.292 | — |
| chr11_679848_A_C | chr11:679848 | -0.141 | -0.184 | -0.292 | — |
| chr11_679757_A_G | chr11:679757 | -0.164 | -0.214 | -0.199 | — |
| chr11_679631_G_T | chr11:679631 | 0.124 | 0.209 | 0.287 | — |
| chr11_679776_T_G | chr11:679776 | -0.162 | -0.181 | -0.234 | — |
| chr11_679848_A_G | chr11:679848 | -0.116 | -0.161 | -0.287 | — |
| chr11_679861_C_G | chr11:679861 | -0.120 | -0.202 | -0.287 | — |
| chr11_679865_G_T | chr11:679865 | 0.161 | 0.217 | 0.287 | — |
| chr11_679841_C_G | chr11:679841 | 0.161 | 0.191 | 0.158 | — |
| chr11_679886_C_A | chr11:679886 | 0.161 | 0.134 | 0.088 | — |
| chr11_679710_G_A | chr11:679710 | 0.161 | 0.239 | 0.246 | — |
| chr11_679758_C_T | chr11:679758 | -0.098 | -0.144 | -0.281 | 0.0020% |
| chr11_679821_A_T | chr11:679821 | 0.132 | 0.176 | 0.281 | — |
| chr11_679826_C_A | chr11:679826 | -0.100 | -0.136 | -0.281 | — |
| chr11_679847_C_A | chr11:679847 | -0.148 | -0.184 | -0.281 | — |
| chr11_679885_C_T | chr11:679885 | 0.158 | 0.222 | 0.164 | — |
| chr11_679668_C_T | chr11:679668 | -0.157 | -0.166 | -0.222 | — |
| chr11_679724_T_C | chr11:679724 | -0.156 | -0.267 | -0.263 | — |
| chr11_679763_G_T | chr11:679763 | -0.154 | -0.277 | -0.275 | — |
| chr11_679803_G_A | chr11:679803 | 0.156 | 0.227 | 0.246 | 0.0020% |
| chr11_679814_T_C | chr11:679814 | -0.156 | -0.196 | -0.275 | — |
| chr11_679838_T_C | chr11:679838 | 0.148 | 0.176 | 0.275 | — |
| chr11_679752_C_G | chr11:679752 | -0.154 | -0.204 | -0.263 | — |
| chr11_679634_G_T | chr11:679634 | 0.118 | 0.204 | 0.269 | — |
| chr11_679672_C_T | chr11:679672 | -0.134 | -0.164 | -0.269 | — |
| chr11_679788_C_T | chr11:679788 | -0.111 | -0.224 | -0.269 | 0.0013% |
| chr11_679829_A_C | chr11:679829 | 0.108 | 0.139 | 0.269 | — |
| chr11_679841_C_T | chr11:679841 | 0.152 | 0.202 | 0.193 | 0.0013% |
| chr11_679857_C_G | chr11:679857 | -0.132 | -0.184 | -0.269 | — |
| chr11_679853_G_A | chr11:679853 | -0.128 | -0.204 | -0.263 | — |
| chr11_679709_C_T | chr11:679709 | 0.147 | 0.179 | 0.199 | 0.0020% |
| chr11_679631_G_C | chr11:679631 | 0.118 | 0.176 | 0.257 | — |
| chr11_679805_G_T | chr11:679805 | 0.146 | 0.174 | 0.251 | — |
| chr11_679809_C_A | chr11:679809 | -0.101 | -0.176 | -0.257 | — |
| chr11_679683_C_A | chr11:679683 | 0.144 | 0.156 | 0.146 | — |
| chr11_679778_C_T | chr11:679778 | 0.144 | 0.159 | 0.240 | — |
| chr11_679845_G_C | chr11:679845 | -0.144 | -0.196 | -0.187 | — |
| chr11_679634_G_C | chr11:679634 | 0.116 | 0.176 | 0.251 | — |
| chr11_679746_C_G | chr11:679746 | -0.142 | -0.222 | -0.216 | — |
| chr11_679765_T_G | chr11:679765 | 0.104 | 0.076 | 0.251 | — |
| chr11_679813_G_A | chr11:679813 | -0.126 | -0.166 | -0.251 | — |
| chr11_679830_A_T | chr11:679830 | 0.142 | 0.144 | 0.211 | — |
| chr11_679720_G_C | chr11:679720 | -0.139 | -0.189 | -0.187 | — |
| chr11_679769_A_C | chr11:679769 | -0.124 | -0.272 | -0.246 | — |
| chr11_679781_C_A | chr11:679781 | 0.118 | 0.113 | 0.246 | — |
| chr11_679834_C_T | chr11:679834 | 0.137 | 0.154 | 0.211 | — |
| chr11_679886_C_G | chr11:679886 | 0.137 | 0.118 | 0.105 | — |
| chr11_679846_C_A | chr11:679846 | -0.136 | -0.164 | -0.228 | — |
| chr11_679858_G_A | chr11:679858 | -0.123 | -0.212 | -0.240 | 0.014% |
| chr11_679687_C_T | chr11:679687 | 0.134 | 0.025 | 0.064 | — |
| chr11_679701_G_A | chr11:679701 | 0.134 | 0.212 | 0.228 | <0.001% |
| chr11_679771_G_A | chr11:679771 | -0.134 | -0.262 | -0.205 | — |
| chr11_679629_G_C | chr11:679629 | 0.114 | 0.169 | 0.234 | — |
| chr11_679712_C_G | chr11:679712 | -0.132 | -0.164 | -0.175 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.