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GGA1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GGA1
chr22:37,508,473..37,733,564, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr22_37560435_C_G | chr22:37560435 | 20,352 | -672 | 9,088 | — |
| chr22_37560434_G_C | chr22:37560434 | -18,944 | 252 | -3,392 | — |
| chr22_37560515_C_A | chr22:37560515 | 18,560 | -736 | 1,312 | — |
| chr22_37560438_C_G | chr22:37560438 | -18,176 | -296 | -4,256 | — |
| chr22_37560427_A_C | chr22:37560427 | -18,048 | 156 | -4,096 | — |
| chr22_37560435_C_A | chr22:37560435 | 18,048 | 84 | 11,008 | — |
| chr22_37519566_G_T | chr22:37519566 | 17,984 | 1,816 | 15,936 | — |
| chr22_37560466_G_C | chr22:37560466 | -17,408 | 392 | -1,856 | — |
| chr22_37560516_G_A | chr22:37560516 | 17,408 | 760 | 6,752 | — |
| chr22_37560440_G_C | chr22:37560440 | -17,344 | 156 | -2,816 | — |
| chr22_37560429_A_C | chr22:37560429 | -17,280 | 84 | -6,976 | — |
| chr22_37560437_C_G | chr22:37560437 | -16,704 | -568 | -6,528 | — |
| chr22_37560423_G_C | chr22:37560423 | -16,064 | 400 | -3,520 | — |
| chr22_37560414_G_T | chr22:37560414 | -15,872 | -220 | -2,816 | — |
| chr22_37560421_G_A | chr22:37560421 | 15,744 | -56 | 9,536 | — |
| chr22_37519569_T_C | chr22:37519569 | -14,080 | -2,304 | -13,824 | — |
| chr22_37519564_G_C | chr22:37519564 | 14,016 | -152 | 14,912 | — |
| chr22_37560409_C_G | chr22:37560409 | -13,888 | 616 | -3,328 | — |
| chr22_37560421_G_C | chr22:37560421 | 13,440 | 276 | 5,568 | — |
| chr22_37560416_C_G | chr22:37560416 | -13,184 | 348 | -2,016 | — |
| chr22_37519504_G_T | chr22:37519504 | 13,120 | 1,336 | 23,680 | — |
| chr22_37560476_C_G | chr22:37560476 | -12,992 | 380 | -2,880 | — |
| chr22_37560462_G_C | chr22:37560462 | -12,608 | 748 | 960 | 6.7e-6 |
| chr22_37560420_A_G | chr22:37560420 | -12,096 | 60 | -5,984 | — |
| chr22_37560468_G_C | chr22:37560468 | 11,904 | -528 | 64 | 2.0e-5 |
| chr22_37519568_C_A | chr22:37519568 | -11,840 | -2,344 | -16,256 | — |
| chr22_37560395_C_T | chr22:37560395 | 11,776 | 276 | 7,232 | — |
| chr22_37560396_G_C | chr22:37560396 | -11,648 | -356 | -4,032 | — |
| chr22_37560418_G_C | chr22:37560418 | -11,648 | -156 | -3,648 | — |
| chr22_37560419_G_C | chr22:37560419 | -11,584 | -348 | -3,456 | — |
| chr22_37560431_C_T | chr22:37560431 | 11,520 | 88 | 4,416 | — |
| chr22_37560443_C_T | chr22:37560443 | 11,520 | 0 | 4,736 | — |
| chr22_37519520_C_A | chr22:37519520 | 11,456 | 1,840 | 13,312 | — |
| chr22_37560435_C_T | chr22:37560435 | 11,392 | -68 | 6,720 | — |
| chr22_37519553_G_C | chr22:37519553 | -11,136 | -3,984 | -16,320 | — |
| chr22_37519549_C_T | chr22:37519549 | 11,072 | 1,104 | 16,000 | — |
| chr22_37560517_G_T | chr22:37560517 | 11,008 | 208 | 8,384 | — |
| chr22_37519576_G_A | chr22:37519576 | 10,944 | 280 | 12,224 | — |
| chr22_37560409_C_T | chr22:37560409 | -10,944 | 184 | 0 | — |
| chr22_37560413_A_T | chr22:37560413 | -10,944 | -608 | -3,136 | — |
| chr22_37560428_C_A | chr22:37560428 | 10,880 | 136 | 5,440 | — |
| chr22_37560411_G_C | chr22:37560411 | -10,752 | -604 | -4,864 | 2.0e-5 |
| chr22_37560399_A_G | chr22:37560399 | -10,688 | 336 | -6,720 | — |
| chr22_37560413_A_C | chr22:37560413 | -10,688 | -556 | -7,552 | — |
| chr22_37560413_A_G | chr22:37560413 | -10,624 | 112 | -4,096 | — |
| chr22_37519512_C_T | chr22:37519512 | 10,496 | 2,504 | 13,632 | — |
| chr22_37560439_C_A | chr22:37560439 | -10,496 | 300 | 64 | 1.3e-5 |
| chr22_37560397_G_C | chr22:37560397 | -10,432 | -312 | -2,976 | — |
| chr22_37560414_G_A | chr22:37560414 | -10,368 | -420 | 320 | — |
| chr22_37519517_C_T | chr22:37519517 | 10,304 | 3,168 | 12,672 | — |
| chr22_37560459_G_T | chr22:37560459 | 10,240 | 552 | 4,672 | — |
| chr22_37519448_C_A | chr22:37519448 | 10,176 | -64 | 13,248 | — |
| chr22_37560429_A_T | chr22:37560429 | -10,176 | 108 | -3,328 | — |
| chr22_37560479_C_A | chr22:37560479 | 10,112 | -92 | 7,104 | — |
| chr22_37560415_G_A | chr22:37560415 | -9,728 | 4 | 1,600 | — |
| chr22_37560421_G_T | chr22:37560421 | 9,728 | 624 | 6,464 | — |
| chr22_37560439_C_G | chr22:37560439 | -9,728 | 32 | -2,496 | — |
| chr22_37560411_G_T | chr22:37560411 | -9,472 | 232 | 1,536 | — |
| chr22_37560434_G_A | chr22:37560434 | -9,472 | -40 | -256 | — |
| chr22_37560398_G_C | chr22:37560398 | -9,344 | -88 | -2,720 | — |
| chr22_37560404_A_T | chr22:37560404 | 9,344 | -72 | 1,952 | — |
| chr22_37607027_G_A | chr22:37607027 | 9,232 | 1,856 | 3,712 | — |
| chr22_37560479_C_G | chr22:37560479 | 9,152 | -592 | 5,888 | — |
| chr22_37560412_G_C | chr22:37560412 | -9,088 | -148 | -3,392 | — |
| chr22_37560454_C_T | chr22:37560454 | 9,088 | 632 | 5,056 | — |
| chr22_37519544_T_A | chr22:37519544 | -9,024 | -1,584 | -13,920 | — |
| chr22_37560397_G_A | chr22:37560397 | -9,024 | 40 | 1,184 | 6.7e-6 |
| chr22_37560417_G_A | chr22:37560417 | -8,960 | 320 | 1,536 | — |
| chr22_37560417_G_C | chr22:37560417 | -8,960 | 108 | -1,472 | 1.3e-5 |
| chr22_37560425_C_A | chr22:37560425 | 8,960 | -100 | 4,032 | — |
| chr22_37519455_T_C | chr22:37519455 | -8,896 | -928 | -12,288 | — |
| chr22_37519563_T_A | chr22:37519563 | 8,832 | 320 | 2,752 | — |
| chr22_37519566_G_A | chr22:37519566 | 8,704 | 1,760 | 8,192 | — |
| chr22_37519566_G_C | chr22:37519566 | 8,640 | 480 | 8,128 | — |
| chr22_37560418_G_A | chr22:37560418 | -8,576 | -100 | -1,728 | — |
| chr22_37560428_C_G | chr22:37560428 | 8,576 | 136 | 5,184 | — |
| chr22_37519448_C_G | chr22:37519448 | 8,512 | -344 | 7,808 | — |
| chr22_37560429_A_G | chr22:37560429 | 8,512 | -216 | 384 | — |
| chr22_37519513_C_T | chr22:37519513 | 8,448 | 1,776 | 10,560 | — |
| chr22_37560398_G_T | chr22:37560398 | -8,448 | 372 | 2,272 | — |
| chr22_37519530_C_G | chr22:37519530 | 8,384 | 536 | 3,776 | — |
| chr22_37519577_C_A | chr22:37519577 | -8,320 | -1,576 | -17,088 | — |
| chr22_37519511_C_T | chr22:37519511 | 8,320 | 1,304 | 11,456 | 6.7e-6 |
| chr22_37560425_C_T | chr22:37560425 | 8,320 | -44 | 4,928 | — |
| chr22_37560504_G_T | chr22:37560504 | 8,320 | 604 | 4,960 | — |
| chr22_37560404_A_C | chr22:37560404 | 8,192 | -200 | -192 | 1.4e-5 |
| chr22_37560432_C_A | chr22:37560432 | 8,192 | 312 | 6,464 | — |
| chr22_37519456_C_A | chr22:37519456 | 8,128 | 1,544 | 11,200 | — |
| chr22_37560510_C_A | chr22:37560510 | 8,128 | 464 | 9,088 | — |
| chr22_37560472_A_C | chr22:37560472 | -8,128 | -460 | -4,416 | — |
| chr22_37560515_C_T | chr22:37560515 | 8,064 | 464 | 4,864 | 1.3e-5 |
| chr22_37519483_G_T | chr22:37519483 | 8,000 | 1,792 | 13,120 | — |
| chr22_37519514_C_A | chr22:37519514 | 8,000 | 1,696 | 11,136 | — |
| chr22_37560510_C_T | chr22:37560510 | 8,000 | 588 | 10,368 | — |
| chr22_37560526_G_T | chr22:37560526 | 7,936 | 1,064 | 11,712 | — |
| chr22_37560426_C_T | chr22:37560426 | 7,936 | -60 | 4,672 | — |
| chr22_37560498_T_C | chr22:37560498 | -7,936 | 216 | -3,392 | — |
| chr22_37519538_A_C | chr22:37519538 | -7,808 | -2,252 | -9,984 | — |
| chr22_37560395_C_A | chr22:37560395 | 7,808 | 340 | 6,880 | — |
| chr22_37560431_C_G | chr22:37560431 | -7,808 | -460 | -4,160 | — |
| chr22_37560450_C_A | chr22:37560450 | 7,808 | -456 | 1,728 | — |
| chr22_37560456_C_A | chr22:37560456 | 7,680 | 40 | 2,368 | — |
| chr22_37519531_C_A | chr22:37519531 | 7,616 | 1,344 | 12,672 | 2.0e-5 |
| chr22_37560493_G_C | chr22:37560493 | -7,616 | -212 | -3,008 | — |
| chr22_37519500_G_A | chr22:37519500 | 7,552 | 2,736 | 11,904 | — |
| chr22_37560397_G_T | chr22:37560397 | -7,552 | 312 | 2,592 | — |
| chr22_37560414_G_C | chr22:37560414 | -7,552 | -120 | -1,568 | — |
| chr22_37519490_G_C | chr22:37519490 | -7,488 | 24 | -5,632 | 1.3e-5 |
| chr22_37560437_C_T | chr22:37560437 | 7,488 | -52 | 3,264 | — |
| chr22_37560406_G_T | chr22:37560406 | 7,424 | 464 | 5,696 | 6.7e-6 |
| chr22_37560415_G_C | chr22:37560415 | -7,424 | -68 | 64 | — |
| chr22_37560416_C_T | chr22:37560416 | -7,424 | 468 | 1,888 | — |
| chr22_37519515_G_C | chr22:37519515 | -7,360 | -1,288 | -7,488 | — |
| chr22_37560436_C_G | chr22:37560436 | -7,296 | -540 | -5,952 | — |
| chr22_37560443_C_A | chr22:37560443 | 7,296 | 64 | 3,392 | — |
| chr22_37519548_T_C | chr22:37519548 | -7,168 | -1,528 | -8,672 | — |
| chr22_37519540_G_C | chr22:37519540 | -7,168 | -1,088 | -7,232 | — |
| chr22_37519544_T_C | chr22:37519544 | -7,104 | -1,024 | -8,800 | — |
| chr22_37560530_C_T | chr22:37560530 | 7,040 | 1,132 | 11,200 | — |
| chr22_37519512_C_A | chr22:37519512 | 6,976 | 1,432 | 8,000 | — |
| chr22_37519556_G_T | chr22:37519556 | 6,592 | -512 | 13,760 | — |
| chr22_37560470_C_T | chr22:37560470 | 6,528 | 1,560 | 11,456 | — |
| chr22_37519473_T_C | chr22:37519473 | -6,528 | -520 | -9,280 | — |
| chr22_37519446_C_A | chr22:37519446 | 6,400 | 536 | 10,240 | — |
| chr22_37519521_C_A | chr22:37519521 | 6,400 | 1,128 | 8,640 | — |
| chr22_37519440_C_G | chr22:37519440 | -6,272 | -704 | -11,008 | — |
| chr22_37560530_C_A | chr22:37560530 | 6,272 | 948 | 9,728 | — |
| chr22_37560514_C_T | chr22:37560514 | 6,272 | 872 | 7,936 | — |
| chr22_37519454_C_T | chr22:37519454 | 6,144 | 760 | 12,096 | — |
| chr22_37519502_G_A | chr22:37519502 | 6,080 | 2,120 | 15,168 | — |
| chr22_37519443_G_T | chr22:37519443 | 5,824 | 776 | 10,752 | — |
| chr22_37519521_C_T | chr22:37519521 | 5,760 | 1,656 | 9,856 | — |
| chr22_37519514_C_T | chr22:37519514 | 5,696 | 1,904 | 9,728 | — |
| chr22_37519510_C_T | chr22:37519510 | 5,632 | 1,448 | 9,792 | 2.0e-5 |
| chr22_37519568_C_G | chr22:37519568 | -5,568 | -1,064 | -7,168 | — |
| chr22_37560529_G_T | chr22:37560529 | 5,440 | 956 | 12,320 | — |
| chr22_37560526_G_A | chr22:37560526 | 5,376 | 848 | 10,112 | — |
| chr22_37560531_C_T | chr22:37560531 | 5,248 | 600 | 7,776 | — |
| chr22_37560531_C_A | chr22:37560531 | 5,120 | 572 | 8,288 | — |
| chr22_37519448_C_T | chr22:37519448 | 4,992 | 832 | 8,960 | — |
| chr22_37560519_A_C | chr22:37560519 | -4,992 | -696 | -7,456 | — |
| chr22_37519484_C_A | chr22:37519484 | 4,800 | 1,520 | 10,112 | — |
| chr22_37560527_C_A | chr22:37560527 | 4,736 | 908 | 11,168 | — |
| chr22_37519505_T_C | chr22:37519505 | -4,736 | -1,568 | -8,704 | — |
| chr22_37519554_C_A | chr22:37519554 | 4,672 | 488 | 11,584 | — |
| chr22_37519528_G_T | chr22:37519528 | 4,672 | 104 | 9,792 | — |
| chr22_37560524_C_A | chr22:37560524 | 4,608 | 688 | 11,680 | — |
| chr22_37560525_G_A | chr22:37560525 | 4,608 | 576 | 7,488 | 6.7e-6 |
| chr22_37519475_C_A | chr22:37519475 | 4,544 | 432 | 7,744 | — |
| chr22_37560529_G_A | chr22:37560529 | 4,480 | 1,052 | 12,256 | 1.3e-5 |
| chr22_37560522_C_T | chr22:37560522 | 4,352 | 1,084 | 11,168 | — |
| chr22_37560470_C_A | chr22:37560470 | 4,352 | 1,080 | 8,192 | 6.7e-6 |
| chr22_37560527_C_T | chr22:37560527 | 4,224 | 776 | 10,528 | — |
| chr22_37560523_G_T | chr22:37560523 | 4,224 | 536 | 8,576 | — |
| chr22_37519562_C_T | chr22:37519562 | 4,160 | 960 | 8,000 | — |
| chr22_37519538_A_G | chr22:37519538 | -4,096 | -848 | -7,296 | 1.4e-5 |
| chr22_37519447_C_A | chr22:37519447 | 4,032 | 632 | 7,936 | — |
| chr22_37519504_G_A | chr22:37519504 | 3,968 | 696 | 8,832 | — |
| chr22_37519499_C_A | chr22:37519499 | 3,840 | 656 | 11,008 | — |
| chr22_37560525_G_T | chr22:37560525 | 3,840 | 676 | 9,408 | — |
| chr22_37519577_C_G | chr22:37519577 | -3,776 | -2,104 | -16,576 | — |
| chr22_37519470_G_T | chr22:37519470 | 3,776 | 1,600 | 8,640 | — |
| chr22_37519477_C_T | chr22:37519477 | 3,648 | 600 | 7,360 | 6.7e-6 |
| chr22_37519457_C_A | chr22:37519457 | 3,520 | 384 | 9,088 | — |
| chr22_37519441_C_T | chr22:37519441 | 3,520 | 520 | 7,360 | — |
| chr22_37560523_G_A | chr22:37560523 | 3,456 | 960 | 11,456 | 6.7e-6 |
| chr22_37560524_C_T | chr22:37560524 | 3,328 | 640 | 13,088 | — |
| chr22_37560513_G_A | chr22:37560513 | 3,328 | 700 | 7,232 | — |
| chr22_37560522_C_A | chr22:37560522 | 3,200 | 884 | 10,720 | — |
| chr22_37519487_C_A | chr22:37519487 | 3,200 | 888 | 8,576 | — |
| chr22_37519442_C_T | chr22:37519442 | 3,200 | 744 | 8,384 | — |
| chr22_37519557_T_C | chr22:37519557 | -3,136 | -2,264 | -10,432 | — |
| chr22_37519505_T_G | chr22:37519505 | -3,136 | -1,664 | -9,792 | — |
| chr22_37519444_T_C | chr22:37519444 | -3,136 | -720 | -8,320 | — |
| chr22_37560521_G_T | chr22:37560521 | 3,072 | 752 | 9,600 | — |
| chr22_37519461_G_A | chr22:37519461 | 3,072 | 1,704 | 8,960 | 6.7e-6 |
| chr22_37519487_C_T | chr22:37519487 | 3,072 | 944 | 8,576 | 2.7e-5 |
| chr22_37519501_T_C | chr22:37519501 | -3,072 | -1,104 | -8,384 | 6.7e-6 |
| chr22_37519562_C_A | chr22:37519562 | 3,072 | 24 | 7,744 | — |
| chr22_37519499_C_T | chr22:37519499 | 2,880 | 192 | 7,296 | — |
| chr22_37519469_G_T | chr22:37519469 | 2,752 | 1,016 | 8,064 | — |
| chr22_37519548_T_G | chr22:37519548 | -2,624 | -1,032 | -7,648 | — |
| chr22_37519468_G_T | chr22:37519468 | 2,560 | 1,440 | 8,128 | — |
| chr22_37519469_G_A | chr22:37519469 | 2,560 | 1,144 | 7,168 | — |
| chr22_37519459_G_A | chr22:37519459 | 2,496 | 944 | 8,256 | — |
| chr22_37519489_C_T | chr22:37519489 | 2,240 | 840 | 7,872 | — |
| chr22_37519506_C_G | chr22:37519506 | -2,240 | -1,568 | -7,616 | — |
| chr22_37519450_C_T | chr22:37519450 | 2,112 | 640 | 7,424 | — |
| chr22_37560475_G_A | chr22:37560475 | 1,920 | 928 | 7,360 | 6.7e-6 |
| chr22_37519453_C_T | chr22:37519453 | 1,728 | 1,008 | 7,296 | — |
| chr22_37519525_C_T | chr22:37519525 | 1,600 | 1,496 | 7,808 | — |
| chr22_37519486_G_T | chr22:37519486 | 1,600 | 936 | 7,488 | — |
| chr22_37519455_T_G | chr22:37519455 | -1,536 | -1,080 | -8,576 | — |
| chr22_37560519_A_G | chr22:37560519 | -1,536 | -636 | -7,648 | — |
| chr22_37519473_T_G | chr22:37519473 | -1,152 | -896 | -8,064 | — |
| chr22_37519478_A_G | chr22:37519478 | -896 | -976 | -7,424 | — |
| chr22_37519500_G_T | chr22:37519500 | 640 | 544 | 8,320 | — |
| chr22_37560521_G_A | chr22:37560521 | -320 | 432 | 12,096 | — |
| chr22_37519490_G_T | chr22:37519490 | -128 | 1,288 | 7,744 | — |
| chr22_37519557_T_G | chr22:37519557 | 0 | -1,848 | -8,000 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.