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GGA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GGA3
chr17:75,136,598..75,362,363, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_75189417_A_T | chr17:75189417 | 0.615 | 1.000 | 1.000 | — |
| chr17_75182608_G_T | chr17:75182608 | 0.462 | 0.116 | 1.000 | — |
| chr17_75189417_A_C | chr17:75189417 | 0.416 | 0.869 | 1.000 | — |
| chr17_75189423_A_T | chr17:75189423 | 0.354 | 0.738 | 1.000 | — |
| chr17_75189451_C_A | chr17:75189451 | 0.335 | 0.330 | 1.000 | — |
| chr17_75189427_C_A | chr17:75189427 | 0.287 | 0.650 | 1.000 | — |
| chr17_75189363_T_G | chr17:75189363 | 0.023 | 0.078 | 1.000 | — |
| chr17_75182757_G_T | chr17:75182757 | -0.003 | 0.136 | 0.876 | — |
| chr17_75189451_C_G | chr17:75189451 | 0.294 | 0.295 | 0.865 | — |
| chr17_75182760_C_A | chr17:75182760 | 0.069 | 0.104 | 0.826 | — |
| chr17_75182757_G_A | chr17:75182757 | 0.020 | 0.106 | 0.820 | — |
| chr17_75182762_G_T | chr17:75182762 | 0.023 | 0.113 | 0.820 | — |
| chr17_75182761_C_A | chr17:75182761 | 0.033 | 0.104 | 0.815 | — |
| chr17_75189336_G_C | chr17:75189336 | 0.091 | 0.086 | 0.792 | — |
| chr17_75182613_A_C | chr17:75182613 | -0.095 | -0.079 | -0.787 | — |
| chr17_75182606_G_A | chr17:75182606 | 0.177 | 0.039 | 0.764 | 0.0013% |
| chr17_75182613_A_G | chr17:75182613 | -0.146 | -0.080 | -0.764 | — |
| chr17_75182753_C_A | chr17:75182753 | 0.079 | 0.139 | 0.764 | — |
| chr17_75182763_C_T | chr17:75182763 | 0.020 | 0.093 | 0.764 | — |
| chr17_75182738_C_A | chr17:75182738 | 0.013 | 0.076 | 0.758 | — |
| chr17_75182761_C_T | chr17:75182761 | 0.003 | 0.093 | 0.758 | — |
| chr17_75182746_G_T | chr17:75182746 | 0.013 | 0.106 | 0.753 | — |
| chr17_75182759_C_T | chr17:75182759 | 0.049 | 0.097 | 0.753 | <0.001% |
| chr17_75182762_G_A | chr17:75182762 | 0.007 | 0.094 | 0.753 | — |
| chr17_75182751_G_T | chr17:75182751 | -0.003 | 0.099 | 0.742 | — |
| chr17_75182753_C_T | chr17:75182753 | 0.085 | 0.132 | 0.742 | — |
| chr17_75182787_A_C | chr17:75182787 | -0.030 | -0.091 | -0.742 | — |
| chr17_75189423_A_C | chr17:75189423 | 0.223 | 0.594 | 0.739 | — |
| chr17_75182738_C_T | chr17:75182738 | -0.033 | 0.079 | 0.736 | — |
| chr17_75182741_G_A | chr17:75182741 | 0.026 | 0.083 | 0.736 | — |
| chr17_75182611_A_G | chr17:75182611 | -0.115 | -0.098 | -0.725 | — |
| chr17_75182735_C_A | chr17:75182735 | -0.007 | 0.084 | 0.719 | — |
| chr17_75182781_G_A | chr17:75182781 | 0.013 | 0.096 | 0.719 | — |
| chr17_75182782_C_T | chr17:75182782 | 0.003 | 0.082 | 0.719 | — |
| chr17_75182758_G_T | chr17:75182758 | 0.020 | 0.097 | 0.708 | — |
| chr17_75182759_C_A | chr17:75182759 | 0.046 | 0.089 | 0.708 | — |
| chr17_75182639_A_G | chr17:75182639 | -0.082 | -0.008 | -0.702 | — |
| chr17_75182609_A_G | chr17:75182609 | -0.095 | -0.062 | -0.697 | — |
| chr17_75182737_G_A | chr17:75182737 | 0.039 | 0.075 | 0.691 | — |
| chr17_75182752_A_C | chr17:75182752 | -0.043 | -0.071 | -0.691 | — |
| chr17_75182746_G_A | chr17:75182746 | 0.020 | 0.088 | 0.674 | — |
| chr17_75182749_C_A | chr17:75182749 | 0.010 | 0.077 | 0.674 | — |
| chr17_75182750_G_T | chr17:75182750 | 0.069 | 0.135 | 0.674 | — |
| chr17_75182755_C_T | chr17:75182755 | 0.062 | 0.086 | 0.669 | — |
| chr17_75182760_C_T | chr17:75182760 | 0.030 | 0.090 | 0.669 | — |
| chr17_75182736_G_A | chr17:75182736 | 0.000 | 0.071 | 0.663 | — |
| chr17_75182736_G_T | chr17:75182736 | 0.023 | 0.076 | 0.663 | — |
| chr17_75182743_T_G | chr17:75182743 | -0.026 | -0.070 | -0.663 | — |
| chr17_75182783_G_T | chr17:75182783 | 0.007 | 0.087 | 0.663 | — |
| chr17_75182767_A_G | chr17:75182767 | -0.010 | -0.076 | -0.646 | — |
| chr17_75182776_A_G | chr17:75182776 | -0.010 | -0.080 | -0.646 | — |
| chr17_75182669_C_G | chr17:75182669 | 0.374 | 0.036 | 0.348 | — |
| chr17_75182747_G_T | chr17:75182747 | 0.010 | 0.086 | 0.640 | — |
| chr17_75182763_C_A | chr17:75182763 | -0.010 | 0.076 | 0.640 | — |
| chr17_75182729_A_C | chr17:75182729 | -0.020 | -0.052 | -0.635 | — |
| chr17_75182702_C_A | chr17:75182702 | 0.033 | 0.042 | 0.629 | — |
| chr17_75182723_G_A | chr17:75182723 | -0.016 | 0.081 | 0.629 | — |
| chr17_75182752_A_G | chr17:75182752 | -0.033 | -0.062 | -0.624 | — |
| chr17_75182768_T_C | chr17:75182768 | -0.023 | -0.082 | -0.624 | — |
| chr17_75189444_C_A | chr17:75189444 | 0.201 | 0.199 | 0.624 | — |
| chr17_75182748_C_A | chr17:75182748 | -0.007 | 0.068 | 0.618 | — |
| chr17_75182748_C_T | chr17:75182748 | -0.010 | 0.067 | 0.618 | — |
| chr17_75182765_C_T | chr17:75182765 | 0.000 | 0.106 | 0.618 | — |
| chr17_75182754_C_T | chr17:75182754 | 0.092 | 0.086 | 0.612 | — |
| chr17_75182764_G_T | chr17:75182764 | 0.015 | 0.082 | 0.607 | — |
| chr17_75182772_C_A | chr17:75182772 | 0.049 | 0.078 | 0.607 | — |
| chr17_75182780_C_T | chr17:75182780 | -0.026 | 0.076 | 0.607 | — |
| chr17_75182782_C_A | chr17:75182782 | 0.026 | 0.096 | 0.607 | 0.0020% |
| chr17_75182739_G_A | chr17:75182739 | 0.030 | 0.062 | 0.601 | — |
| chr17_75189356_C_T | chr17:75189356 | 0.299 | 0.224 | 0.601 | — |
| chr17_75189416_G_T | chr17:75189416 | -0.125 | -0.453 | -0.601 | — |
| chr17_75182731_C_T | chr17:75182731 | -0.016 | 0.069 | 0.596 | — |
| chr17_75182732_C_T | chr17:75182732 | 0.020 | 0.072 | 0.596 | — |
| chr17_75182611_A_C | chr17:75182611 | 0.003 | -0.074 | -0.590 | — |
| chr17_75189366_G_C | chr17:75189366 | -0.167 | -0.277 | -0.587 | — |
| chr17_75182706_G_A | chr17:75182706 | 0.016 | 0.057 | 0.584 | <0.001% |
| chr17_75182735_C_T | chr17:75182735 | -0.007 | 0.064 | 0.584 | — |
| chr17_75182787_A_G | chr17:75182787 | -0.030 | -0.068 | -0.584 | — |
| chr17_75189416_G_A | chr17:75189416 | -0.142 | -0.469 | -0.584 | — |
| chr17_75189443_A_T | chr17:75189443 | 0.150 | 0.272 | 0.584 | — |
| chr17_75182754_C_A | chr17:75182754 | 0.082 | 0.099 | 0.579 | — |
| chr17_75189351_G_T | chr17:75189351 | 0.155 | 0.242 | 0.579 | — |
| chr17_75189366_G_A | chr17:75189366 | -0.164 | -0.280 | -0.579 | <0.001% |
| chr17_75182699_G_T | chr17:75182699 | 0.039 | 0.064 | 0.573 | — |
| chr17_75182724_C_T | chr17:75182724 | -0.010 | 0.063 | 0.573 | — |
| chr17_75189452_C_G | chr17:75189452 | 0.043 | 0.224 | 0.573 | — |
| chr17_75189412_G_T | chr17:75189412 | -0.105 | -0.465 | -0.570 | — |
| chr17_75182725_T_G | chr17:75182725 | -0.031 | -0.057 | -0.567 | — |
| chr17_75182739_G_T | chr17:75182739 | 0.039 | 0.066 | 0.567 | — |
| chr17_75189445_C_G | chr17:75189445 | 0.107 | 0.214 | 0.567 | — |
| chr17_75189446_T_G | chr17:75189446 | 0.052 | 0.202 | 0.567 | — |
| chr17_75189364_C_T | chr17:75189364 | -0.150 | -0.214 | -0.565 | — |
| chr17_75189412_G_A | chr17:75189412 | -0.105 | -0.436 | -0.565 | — |
| chr17_75182709_G_A | chr17:75182709 | 0.079 | 0.051 | 0.562 | — |
| chr17_75182724_C_A | chr17:75182724 | -0.003 | 0.077 | 0.562 | <0.001% |
| chr17_75182756_C_T | chr17:75182756 | 0.020 | 0.070 | 0.562 | — |
| chr17_75182802_C_A | chr17:75182802 | 0.003 | 0.080 | 0.562 | — |
| chr17_75182755_C_A | chr17:75182755 | 0.039 | 0.060 | 0.556 | — |
| chr17_75182778_C_T | chr17:75182778 | -0.007 | 0.065 | 0.556 | <0.001% |
| chr17_75182785_C_A | chr17:75182785 | 0.016 | 0.083 | 0.556 | — |
| chr17_75189412_G_C | chr17:75189412 | -0.100 | -0.460 | -0.556 | — |
| chr17_75189372_T_A | chr17:75189372 | -0.152 | -0.166 | -0.553 | — |
| chr17_75182608_G_C | chr17:75182608 | 0.282 | 0.021 | 0.551 | — |
| chr17_75182684_C_A | chr17:75182684 | 0.039 | 0.063 | 0.551 | — |
| chr17_75182696_C_A | chr17:75182696 | 0.036 | 0.064 | 0.551 | — |
| chr17_75182729_A_G | chr17:75182729 | -0.044 | -0.047 | -0.551 | — |
| chr17_75182747_G_A | chr17:75182747 | 0.030 | 0.072 | 0.551 | — |
| chr17_75182772_C_T | chr17:75182772 | 0.016 | 0.065 | 0.551 | — |
| chr17_75182718_A_C | chr17:75182718 | 0.000 | -0.059 | -0.539 | — |
| chr17_75182740_G_T | chr17:75182740 | 0.043 | 0.062 | 0.539 | — |
| chr17_75182750_G_A | chr17:75182750 | 0.016 | 0.072 | 0.539 | — |
| chr17_75182751_G_A | chr17:75182751 | 0.010 | 0.070 | 0.539 | — |
| chr17_75182756_C_A | chr17:75182756 | 0.020 | 0.064 | 0.539 | — |
| chr17_75182779_G_T | chr17:75182779 | 0.007 | 0.088 | 0.539 | — |
| chr17_75182802_C_T | chr17:75182802 | 0.013 | 0.083 | 0.539 | — |
| chr17_75182745_T_G | chr17:75182745 | -0.026 | -0.048 | -0.534 | — |
| chr17_75189367_A_T | chr17:75189367 | -0.145 | -0.229 | -0.534 | — |
| chr17_75182700_C_T | chr17:75182700 | 0.036 | 0.054 | 0.528 | — |
| chr17_75182742_C_A | chr17:75182742 | 0.039 | 0.068 | 0.528 | — |
| chr17_75182769_G_T | chr17:75182769 | -0.033 | 0.058 | 0.528 | — |
| chr17_75182783_G_A | chr17:75182783 | 0.026 | 0.071 | 0.528 | — |
| chr17_75182784_G_A | chr17:75182784 | 0.033 | 0.078 | 0.528 | — |
| chr17_75182793_A_C | chr17:75182793 | -0.023 | -0.061 | -0.528 | — |
| chr17_75182741_G_T | chr17:75182741 | 0.000 | 0.064 | 0.522 | — |
| chr17_75189414_A_T | chr17:75189414 | -0.102 | -0.442 | -0.522 | — |
| chr17_75189418_G_C | chr17:75189418 | -0.155 | -0.520 | -0.520 | 3.54% |
| chr17_75182712_C_A | chr17:75182712 | 0.062 | 0.050 | 0.517 | — |
| chr17_75182730_G_T | chr17:75182730 | 0.008 | 0.072 | 0.517 | — |
| chr17_75189420_A_T | chr17:75189420 | -0.074 | -0.419 | -0.517 | — |
| chr17_75182778_C_A | chr17:75182778 | 0.023 | 0.058 | 0.511 | — |
| chr17_75189413_A_T | chr17:75189413 | -0.109 | -0.456 | -0.511 | — |
| chr17_75189370_C_T | chr17:75189370 | -0.140 | -0.242 | -0.508 | — |
| chr17_75182683_G_A | chr17:75182683 | 0.079 | 0.045 | 0.506 | — |
| chr17_75182708_G_A | chr17:75182708 | 0.085 | 0.044 | 0.506 | — |
| chr17_75182726_G_A | chr17:75182726 | 0.010 | 0.066 | 0.506 | 0.0053% |
| chr17_75182764_G_A | chr17:75182764 | 0.034 | 0.065 | 0.506 | — |
| chr17_75182781_G_T | chr17:75182781 | 0.016 | 0.071 | 0.506 | — |
| chr17_75182798_C_A | chr17:75182798 | 0.013 | 0.073 | 0.506 | — |
| chr17_75182799_C_A | chr17:75182799 | 0.023 | 0.064 | 0.506 | — |
| chr17_75189371_A_T | chr17:75189371 | -0.145 | -0.264 | -0.506 | — |
| chr17_75182643_A_G | chr17:75182643 | -0.039 | -0.003 | -0.500 | — |
| chr17_75189367_A_C | chr17:75189367 | -0.136 | -0.262 | -0.500 | — |
| chr17_75189369_T_C | chr17:75189369 | -0.168 | -0.234 | -0.497 | — |
| chr17_75182684_C_T | chr17:75182684 | 0.036 | 0.064 | 0.494 | — |
| chr17_75182698_G_T | chr17:75182698 | 0.007 | 0.064 | 0.494 | — |
| chr17_75182743_T_C | chr17:75182743 | -0.023 | -0.052 | -0.494 | — |
| chr17_75182749_C_T | chr17:75182749 | 0.020 | 0.066 | 0.494 | — |
| chr17_75182758_G_A | chr17:75182758 | 0.030 | 0.081 | 0.494 | — |
| chr17_75182771_C_T | chr17:75182771 | 0.023 | 0.067 | 0.494 | — |
| chr17_75182797_G_A | chr17:75182797 | 0.046 | 0.061 | 0.494 | — |
| chr17_75189351_G_C | chr17:75189351 | 0.113 | 0.181 | 0.494 | — |
| chr17_75189419_A_T | chr17:75189419 | -0.108 | -0.433 | -0.494 | — |
| chr17_75189443_A_G | chr17:75189443 | 0.149 | 0.196 | 0.494 | 0.0020% |
| chr17_75189444_C_G | chr17:75189444 | 0.087 | 0.144 | 0.494 | — |
| chr17_75189365_T_A | chr17:75189365 | -0.141 | -0.202 | -0.492 | — |
| chr17_75189418_G_T | chr17:75189418 | -0.047 | -0.499 | -0.492 | — |
| chr17_75182737_G_T | chr17:75182737 | 0.033 | 0.057 | 0.489 | — |
| chr17_75182776_A_C | chr17:75182776 | -0.079 | -0.042 | -0.489 | — |
| chr17_75189406_A_G | chr17:75189406 | 0.129 | 0.171 | 0.486 | — |
| chr17_75182616_G_A | chr17:75182616 | 0.049 | 0.034 | 0.483 | — |
| chr17_75182692_G_A | chr17:75182692 | 0.013 | 0.050 | 0.483 | — |
| chr17_75182693_C_T | chr17:75182693 | 0.026 | 0.047 | 0.483 | — |
| chr17_75182698_G_A | chr17:75182698 | 0.066 | 0.063 | 0.483 | — |
| chr17_75182711_G_A | chr17:75182711 | 0.062 | 0.048 | 0.483 | — |
| chr17_75182765_C_A | chr17:75182765 | 0.016 | 0.079 | 0.483 | — |
| chr17_75182766_C_T | chr17:75182766 | 0.023 | 0.059 | 0.483 | — |
| chr17_75182780_C_A | chr17:75182780 | -0.010 | 0.067 | 0.483 | — |
| chr17_75189365_T_G | chr17:75189365 | -0.135 | -0.217 | -0.483 | — |
| chr17_75189371_A_C | chr17:75189371 | -0.151 | -0.267 | -0.483 | — |
| chr17_75189413_A_G | chr17:75189413 | -0.109 | -0.466 | -0.483 | — |
| chr17_75189368_C_T | chr17:75189368 | -0.135 | -0.219 | -0.480 | — |
| chr17_75189370_C_G | chr17:75189370 | -0.138 | -0.264 | -0.475 | — |
| chr17_75182668_G_A | chr17:75182668 | 0.072 | 0.052 | 0.472 | — |
| chr17_75182693_C_A | chr17:75182693 | 0.016 | 0.059 | 0.472 | — |
| chr17_75182712_C_T | chr17:75182712 | 0.046 | 0.063 | 0.472 | — |
| chr17_75182723_G_T | chr17:75182723 | -0.026 | 0.065 | 0.472 | — |
| chr17_75182789_G_T | chr17:75182789 | 0.007 | 0.071 | 0.472 | — |
| chr17_75189413_A_C | chr17:75189413 | -0.107 | -0.460 | -0.472 | — |
| chr17_75189414_A_G | chr17:75189414 | -0.099 | -0.457 | -0.472 | — |
| chr17_75182609_A_C | chr17:75182609 | 0.016 | -0.069 | -0.466 | — |
| chr17_75182697_C_T | chr17:75182697 | 0.033 | 0.047 | 0.466 | — |
| chr17_75182714_C_A | chr17:75182714 | 0.033 | 0.066 | 0.466 | — |
| chr17_75189415_A_G | chr17:75189415 | -0.135 | -0.461 | -0.466 | — |
| chr17_75182608_G_A | chr17:75182608 | 0.020 | 0.099 | 0.461 | — |
| chr17_75182625_T_C | chr17:75182625 | -0.036 | -0.021 | -0.461 | — |
| chr17_75182695_G_T | chr17:75182695 | 0.023 | 0.058 | 0.461 | — |
| chr17_75182715_G_A | chr17:75182715 | 0.020 | 0.065 | 0.461 | — |
| chr17_75182722_C_T | chr17:75182722 | 0.005 | 0.065 | 0.461 | <0.001% |
| chr17_75182740_G_A | chr17:75182740 | 0.030 | 0.062 | 0.461 | — |
| chr17_75182779_G_A | chr17:75182779 | 0.013 | 0.052 | 0.461 | — |
| chr17_75182800_G_T | chr17:75182800 | -0.023 | 0.068 | 0.461 | <0.001% |
| chr17_75182725_T_C | chr17:75182725 | -0.010 | -0.037 | -0.455 | — |
| chr17_75182768_T_G | chr17:75182768 | -0.013 | -0.048 | -0.455 | — |
| chr17_75182785_C_T | chr17:75182785 | 0.039 | 0.069 | 0.455 | — |
| chr17_75189345_A_G | chr17:75189345 | 0.134 | 0.156 | 0.455 | — |
| chr17_75189367_A_G | chr17:75189367 | -0.127 | -0.229 | -0.455 | — |
| chr17_75189420_A_G | chr17:75189420 | -0.093 | -0.427 | -0.452 | — |
| chr17_75182692_G_T | chr17:75182692 | -0.003 | 0.058 | 0.449 | — |
| chr17_75182722_C_A | chr17:75182722 | 0.010 | 0.062 | 0.449 | <0.001% |
| chr17_75182734_G_T | chr17:75182734 | 0.020 | 0.061 | 0.449 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.