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GPS2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near GPS2
chr17:7,212,660..7,415,360, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_7215037_T_C | chr17:7215037 | 26,688 | 4,496 | 11,264 | — |
| chr17_7215048_G_T | chr17:7215048 | -23,808 | -2,400 | -12,288 | — |
| chr17_7215048_G_A | chr17:7215048 | -23,680 | -2,576 | -14,336 | — |
| chr17_7215042_C_A | chr17:7215042 | -22,336 | -2,608 | -14,336 | 6.6e-6 |
| chr17_7215048_G_C | chr17:7215048 | -22,272 | -2,592 | -8,832 | — |
| chr17_7215038_G_C | chr17:7215038 | -21,440 | -1,840 | -14,080 | — |
| chr17_7215047_A_T | chr17:7215047 | 21,120 | 2,864 | 8,320 | — |
| chr17_7215038_G_A | chr17:7215038 | -20,288 | -1,488 | -12,928 | 1.3e-5 |
| chr17_7215046_C_A | chr17:7215046 | -19,328 | -2,656 | -13,952 | — |
| chr17_7215040_C_T | chr17:7215040 | -19,136 | -3,232 | -11,264 | — |
| chr17_7215042_C_G | chr17:7215042 | -18,944 | -2,784 | -11,264 | — |
| chr17_7214286_G_T | chr17:7214286 | 18,688 | 2,080 | 8,704 | 1.3e-5 |
| chr17_7215040_C_G | chr17:7215040 | -18,496 | -2,688 | -7,680 | — |
| chr17_7215044_T_A | chr17:7215044 | -18,496 | -2,464 | -10,112 | — |
| chr17_7215040_C_A | chr17:7215040 | -18,240 | -2,288 | -11,008 | — |
| chr17_7215039_C_G | chr17:7215039 | -18,112 | -2,512 | -12,416 | — |
| chr17_7215044_T_C | chr17:7215044 | -17,664 | -2,400 | -8,192 | 2.0e-5 |
| chr17_7215044_T_G | chr17:7215044 | -16,576 | -2,432 | -6,656 | — |
| chr17_7215038_G_T | chr17:7215038 | -16,256 | -1,856 | -9,600 | — |
| chr17_7215039_C_T | chr17:7215039 | -15,808 | -2,128 | -12,160 | — |
| chr17_7215049_G_C | chr17:7215049 | -15,168 | -1,552 | -8,704 | — |
| chr17_7215043_C_A | chr17:7215043 | -15,040 | -2,064 | -12,544 | — |
| chr17_7215043_C_T | chr17:7215043 | -15,040 | -1,888 | -13,568 | — |
| chr17_7215050_C_G | chr17:7215050 | -14,976 | -944 | -4,992 | — |
| chr17_7214782_A_C | chr17:7214782 | 14,592 | 896 | 7,680 | — |
| chr17_7215045_G_C | chr17:7215045 | -14,400 | -2,416 | -12,288 | — |
| chr17_7214781_G_T | chr17:7214781 | 14,080 | 992 | 8,448 | — |
| chr17_7214783_T_A | chr17:7214783 | 13,952 | 864 | 7,424 | — |
| chr17_7215049_G_A | chr17:7215049 | -13,184 | -1,504 | -8,960 | — |
| chr17_7214784_G_A | chr17:7214784 | 12,992 | 576 | 5,888 | — |
| chr17_7214781_G_A | chr17:7214781 | 12,928 | 1,024 | 9,472 | — |
| chr17_7215003_A_C | chr17:7215003 | 12,928 | 1,360 | 5,120 | — |
| chr17_7215039_C_A | chr17:7215039 | -12,736 | -1,664 | -8,960 | — |
| chr17_7215047_A_G | chr17:7215047 | -12,672 | -1,904 | -4,352 | — |
| chr17_7214783_T_C | chr17:7214783 | 12,288 | 896 | 9,216 | — |
| chr17_7215043_C_G | chr17:7215043 | -12,224 | -2,000 | -7,680 | — |
| chr17_7214445_C_T | chr17:7214445 | 11,776 | 2,784 | 13,568 | 6.6e-6 |
| chr17_7214783_T_G | chr17:7214783 | 11,648 | 448 | 8,960 | — |
| chr17_7215049_G_T | chr17:7215049 | -11,584 | -864 | -6,784 | — |
| chr17_7214487_C_T | chr17:7214487 | -11,520 | 1,152 | -2,560 | 2.0e-5 |
| chr17_7214287_G_A | chr17:7214287 | 11,072 | 1,696 | 5,376 | 6.6e-6 |
| chr17_7215020_G_C | chr17:7215020 | 11,008 | 1,232 | 7,808 | — |
| chr17_7214785_C_G | chr17:7214785 | 10,880 | -768 | 15,360 | — |
| chr17_7214781_G_C | chr17:7214781 | 10,752 | 1,376 | 10,240 | 6.6e-6 |
| chr17_7215041_C_T | chr17:7215041 | -10,176 | -2,464 | -8,064 | — |
| chr17_7215045_G_T | chr17:7215045 | -10,112 | -1,680 | -8,960 | — |
| chr17_7215046_C_T | chr17:7215046 | -9,728 | -1,248 | -5,632 | — |
| chr17_7215047_A_C | chr17:7215047 | 9,600 | 1,024 | 5,248 | — |
| chr17_7215034_A_C | chr17:7215034 | -9,344 | 208 | -4,736 | — |
| chr17_7215037_T_G | chr17:7215037 | -9,216 | -944 | -6,656 | — |
| chr17_7214784_G_C | chr17:7214784 | 9,152 | 128 | 6,144 | — |
| chr17_7214779_G_C | chr17:7214779 | 9,024 | 1,024 | 6,400 | — |
| chr17_7214782_A_T | chr17:7214782 | 8,704 | 1,248 | 4,608 | — |
| chr17_7215041_C_G | chr17:7215041 | -8,704 | -2,752 | -4,480 | — |
| chr17_7214784_G_T | chr17:7214784 | 8,640 | 640 | 5,120 | — |
| chr17_7214298_G_C | chr17:7214298 | -8,576 | -960 | -8,704 | 6.6e-6 |
| chr17_7214138_G_A | chr17:7214138 | -8,512 | -2,432 | -10,624 | 1.3e-5 |
| chr17_7215023_A_G | chr17:7215023 | -8,384 | 384 | -1,280 | — |
| chr17_7215037_T_A | chr17:7215037 | -8,000 | -816 | -6,656 | — |
| chr17_7214318_G_A | chr17:7214318 | -7,808 | -1,344 | -7,424 | 6.6e-6 |
| chr17_7214998_T_C | chr17:7214998 | -7,680 | 32 | -2,944 | — |
| chr17_7215030_A_G | chr17:7215030 | -7,680 | 32 | 512 | — |
| chr17_7214567_C_G | chr17:7214567 | 7,424 | 992 | 1,024 | 6.6e-6 |
| chr17_7214785_C_A | chr17:7214785 | 7,104 | 1,152 | 7,936 | — |
| chr17_7214488_G_A | chr17:7214488 | -7,040 | -352 | -4,608 | 6.6e-6 |
| chr17_7214786_T_A | chr17:7214786 | 6,976 | 128 | 4,864 | — |
| chr17_7215024_A_G | chr17:7215024 | -6,912 | -96 | -512 | — |
| chr17_7214786_T_C | chr17:7214786 | 6,848 | -64 | 10,496 | — |
| chr17_7214983_G_C | chr17:7214983 | -6,848 | -144 | -6,528 | — |
| chr17_7215020_G_A | chr17:7215020 | 6,848 | 656 | 768 | 6.6e-6 |
| chr17_7215026_C_G | chr17:7215026 | -6,720 | -656 | -3,968 | — |
| chr17_7215021_G_C | chr17:7215021 | 6,528 | 592 | 3,456 | — |
| chr17_7214438_C_A | chr17:7214438 | -6,400 | -2,080 | -10,240 | 6.6e-6 |
| chr17_7215022_G_T | chr17:7215022 | 6,400 | 928 | -768 | — |
| chr17_7215036_G_T | chr17:7215036 | -6,400 | 208 | -4,224 | — |
| chr17_7214166_C_T | chr17:7214166 | 6,144 | 896 | 1,280 | 6.6e-6 |
| chr17_7214768_A_G | chr17:7214768 | -6,016 | -4,624 | -22,400 | 1.3e-5 |
| chr17_7215051_T_C | chr17:7215051 | -6,016 | -672 | -2,560 | — |
| chr17_7214782_A_G | chr17:7214782 | 5,888 | 1,024 | 6,912 | — |
| chr17_7214116_A_C | chr17:7214116 | -5,824 | -1,696 | -8,192 | 4.7e-4 |
| chr17_7215020_G_T | chr17:7215020 | 5,824 | -160 | -1,152 | — |
| chr17_7215024_A_T | chr17:7215024 | -5,824 | -304 | -4,096 | — |
| chr17_7215026_C_T | chr17:7215026 | 5,824 | 864 | 1,408 | — |
| chr17_7215051_T_G | chr17:7215051 | 5,696 | 816 | 4,480 | — |
| chr17_7215045_G_A | chr17:7215045 | 5,632 | 720 | 896 | — |
| chr17_7214446_C_G | chr17:7214446 | -5,504 | -256 | 512 | 6.6e-6 |
| chr17_7214785_C_T | chr17:7214785 | 5,504 | 480 | 3,328 | — |
| chr17_7215012_A_G | chr17:7215012 | 5,504 | 1,056 | 4,864 | — |
| chr17_7215036_G_C | chr17:7215036 | 5,504 | 1,104 | -1,152 | — |
| chr17_7214763_G_A | chr17:7214763 | 5,440 | 1,120 | 9,728 | 6.6e-6 |
| chr17_7214475_G_T | chr17:7214475 | -5,440 | -192 | -6,144 | 1.3e-5 |
| chr17_7214390_A_T | chr17:7214390 | 5,440 | 960 | 4,352 | 1.3e-5 |
| chr17_7214552_C_T | chr17:7214552 | 5,248 | 1,696 | 1,792 | 1.3e-5 |
| chr17_7215033_C_T | chr17:7215033 | -5,184 | 304 | -5,888 | — |
| chr17_7214968_G_C | chr17:7214968 | 5,184 | 256 | 5,760 | — |
| chr17_7215034_A_G | chr17:7215034 | 5,184 | 1,280 | 128 | — |
| chr17_7215042_C_T | chr17:7215042 | -5,120 | -1,088 | -3,840 | — |
| chr17_7214830_C_G | chr17:7214830 | 4,992 | 3,136 | 11,008 | — |
| chr17_7214734_A_C | chr17:7214734 | 4,992 | 288 | 4,352 | 2.0e-5 |
| chr17_7214328_C_G | chr17:7214328 | -4,928 | -448 | -2,816 | 6.6e-4 |
| chr17_7214971_A_G | chr17:7214971 | -4,928 | 112 | -3,456 | — |
| chr17_7215015_A_G | chr17:7215015 | 4,928 | 96 | 3,072 | — |
| chr17_7214351_G_T | chr17:7214351 | -4,864 | -768 | -512 | 6.6e-6 |
| chr17_7214441_C_G | chr17:7214441 | 4,864 | -896 | 3,072 | 6.6e-6 |
| chr17_7214707_G_C | chr17:7214707 | 4,864 | -96 | 3,072 | 6.6e-6 |
| chr17_7215023_A_T | chr17:7215023 | -4,800 | 832 | -1,024 | — |
| chr17_7214762_G_T | chr17:7214762 | 4,736 | 1,344 | 9,984 | 6.6e-6 |
| chr17_7214983_G_A | chr17:7214983 | -4,736 | -560 | -6,784 | — |
| chr17_7214983_G_T | chr17:7214983 | -4,736 | -64 | -5,632 | — |
| chr17_7214967_G_C | chr17:7214967 | 4,736 | 384 | 5,248 | — |
| chr17_7214350_G_C | chr17:7214350 | -4,736 | -928 | -2,048 | 6.6e-6 |
| chr17_7214786_T_G | chr17:7214786 | 4,672 | 1,024 | 8,704 | — |
| chr17_7215035_T_C | chr17:7215035 | -4,672 | -1,216 | 5,632 | — |
| chr17_7215014_C_A | chr17:7215014 | -4,672 | -448 | -2,176 | — |
| chr17_7214979_G_C | chr17:7214979 | -4,608 | -352 | -5,376 | — |
| chr17_7214283_G_C | chr17:7214283 | 4,608 | 896 | 1,536 | 6.6e-6 |
| chr17_7214951_A_C | chr17:7214951 | 4,480 | 672 | 8,192 | — |
| chr17_7214311_C_G | chr17:7214311 | -4,480 | -1,920 | -5,632 | 6.6e-6 |
| chr17_7215007_C_G | chr17:7215007 | 4,480 | -128 | 3,712 | — |
| chr17_7215011_C_G | chr17:7215011 | 4,480 | 864 | 3,712 | — |
| chr17_7214629_G_A | chr17:7214629 | -4,352 | -1,184 | -4,352 | 6.6e-6 |
| chr17_7214853_G_C | chr17:7214853 | 4,352 | 416 | 3,584 | — |
| chr17_7215013_G_T | chr17:7215013 | -4,352 | 272 | 768 | — |
| chr17_7215019_G_C | chr17:7215019 | 4,352 | -400 | 4,224 | — |
| chr17_7214965_C_A | chr17:7214965 | -4,288 | 16 | -5,632 | — |
| chr17_7214972_G_C | chr17:7214972 | -4,288 | -32 | -3,328 | — |
| chr17_7214966_T_C | chr17:7214966 | 4,224 | 256 | 5,376 | 6.6e-6 |
| chr17_7214692_C_T | chr17:7214692 | 4,224 | 1,568 | -512 | 6.6e-6 |
| chr17_7214699_C_T | chr17:7214699 | 4,224 | 832 | 3,584 | 6.6e-6 |
| chr17_7214946_A_T | chr17:7214946 | -4,224 | -1,120 | -2,816 | — |
| chr17_7215035_T_G | chr17:7215035 | 4,224 | 1,440 | -128 | — |
| chr17_7214978_C_T | chr17:7214978 | -4,160 | -352 | -4,480 | — |
| chr17_7214934_A_C | chr17:7214934 | 4,160 | 736 | 3,328 | — |
| chr17_7214759_C_T | chr17:7214759 | -4,096 | -736 | -5,888 | 6.6e-6 |
| chr17_7214780_A_C | chr17:7214780 | 4,096 | 864 | 4,608 | — |
| chr17_7214795_A_C | chr17:7214795 | 4,096 | 96 | 2,560 | — |
| chr17_7215036_G_A | chr17:7215036 | 4,096 | 848 | -1,920 | — |
| chr17_7214788_A_C | chr17:7214788 | 3,968 | 640 | 6,400 | — |
| chr17_7214979_G_T | chr17:7214979 | -3,968 | -240 | -5,376 | — |
| chr17_7214719_C_G | chr17:7214719 | 3,840 | -1,408 | 4,096 | 6.6e-6 |
| chr17_7214882_A_C | chr17:7214882 | 3,712 | 352 | 4,352 | 6.6e-6 |
| chr17_7215031_G_T | chr17:7215031 | -3,648 | -672 | -4,736 | — |
| chr17_7214951_A_T | chr17:7214951 | 3,520 | 992 | 16,256 | — |
| chr17_7214955_T_G | chr17:7214955 | 3,392 | 384 | 5,760 | — |
| chr17_7214788_A_G | chr17:7214788 | 3,392 | 192 | 4,864 | — |
| chr17_7214966_T_G | chr17:7214966 | 3,264 | 320 | 6,400 | — |
| chr17_7214979_G_A | chr17:7214979 | -3,200 | -320 | -4,864 | — |
| chr17_7214957_A_C | chr17:7214957 | 3,200 | 96 | 4,096 | — |
| chr17_7214947_T_C | chr17:7214947 | 3,136 | 928 | 4,992 | — |
| chr17_7214957_A_G | chr17:7214957 | 3,136 | 416 | 4,224 | — |
| chr17_7214409_A_C | chr17:7214409 | -2,944 | -832 | -6,144 | 6.7e-6 |
| chr17_7214982_C_A | chr17:7214982 | -2,880 | -32 | -4,736 | — |
| chr17_7214998_T_G | chr17:7214998 | 2,880 | 256 | 4,352 | — |
| chr17_7214951_A_G | chr17:7214951 | 2,816 | 576 | 4,992 | — |
| chr17_7214961_A_C | chr17:7214961 | 2,816 | 192 | 4,864 | — |
| chr17_7214131_A_T | chr17:7214131 | -2,752 | -160 | -4,608 | 6.6e-6 |
| chr17_7214779_G_T | chr17:7214779 | 2,752 | 544 | 4,608 | — |
| chr17_7214721_T_G | chr17:7214721 | -2,688 | -1,216 | -7,936 | 1.6e-4 |
| chr17_7214454_T_C | chr17:7214454 | -2,688 | -2,336 | -7,680 | 6.7e-6 |
| chr17_7214942_A_C | chr17:7214942 | 2,624 | 608 | 4,608 | — |
| chr17_7214969_G_C | chr17:7214969 | 2,432 | 416 | 7,552 | — |
| chr17_7214882_A_G | chr17:7214882 | 2,432 | -64 | 5,888 | — |
| chr17_7214294_C_A | chr17:7214294 | -2,368 | -160 | -4,608 | 6.6e-6 |
| chr17_7214990_C_G | chr17:7214990 | 2,304 | -32 | 5,504 | 6.6e-6 |
| chr17_7214974_T_G | chr17:7214974 | 2,240 | -96 | 5,632 | — |
| chr17_7214905_T_G | chr17:7214905 | 2,176 | 480 | 4,480 | — |
| chr17_7214669_C_T | chr17:7214669 | 2,176 | 704 | 4,352 | 3.3e-5 |
| chr17_7214953_A_C | chr17:7214953 | 2,112 | 256 | 4,480 | — |
| chr17_7214311_C_A | chr17:7214311 | -2,048 | -1,600 | -5,888 | 6.6e-6 |
| chr17_7214916_C_A | chr17:7214916 | -1,856 | -384 | -4,352 | — |
| chr17_7214950_A_C | chr17:7214950 | 1,792 | 896 | 5,632 | — |
| chr17_7214880_G_A | chr17:7214880 | -1,792 | -384 | -4,608 | — |
| chr17_7214642_C_A | chr17:7214642 | -1,664 | 224 | 9,216 | 6.6e-6 |
| chr17_7214794_G_T | chr17:7214794 | -1,664 | -224 | -4,096 | — |
| chr17_7214811_A_C | chr17:7214811 | -1,600 | -1,088 | 4,096 | — |
| chr17_7214811_A_T | chr17:7214811 | -1,600 | -704 | 4,096 | — |
| chr17_7214434_T_C | chr17:7214434 | 1,472 | -160 | -4,352 | 1.3e-5 |
| chr17_7214978_C_A | chr17:7214978 | -1,472 | -224 | -4,096 | — |
| chr17_7214810_G_A | chr17:7214810 | -1,408 | -416 | 5,632 | — |
| chr17_7214685_A_T | chr17:7214685 | 1,408 | -64 | 5,120 | 6.6e-6 |
| chr17_7214809_A_G | chr17:7214809 | -1,408 | -1,024 | 4,352 | — |
| chr17_7214814_A_C | chr17:7214814 | 1,408 | -480 | 4,096 | — |
| chr17_7214982_C_T | chr17:7214982 | -1,152 | 32 | -5,760 | — |
| chr17_7214798_G_A | chr17:7214798 | 1,152 | -288 | 4,864 | — |
| chr17_7215028_G_C | chr17:7215028 | -1,024 | -448 | 5,632 | — |
| chr17_7214799_A_C | chr17:7214799 | 1,024 | -832 | 4,864 | — |
| chr17_7214916_C_G | chr17:7214916 | -960 | -96 | -4,352 | — |
| chr17_7214961_A_G | chr17:7214961 | 896 | 0 | 4,480 | — |
| chr17_7214159_A_G | chr17:7214159 | 896 | 832 | 4,096 | 6.6e-6 |
| chr17_7214838_T_C | chr17:7214838 | 896 | -832 | 4,096 | — |
| chr17_7214963_A_C | chr17:7214963 | 832 | 128 | 4,352 | — |
| chr17_7214809_A_C | chr17:7214809 | 768 | -288 | 4,608 | — |
| chr17_7214474_T_C | chr17:7214474 | -768 | -384 | -4,352 | 6.6e-6 |
| chr17_7214642_C_T | chr17:7214642 | 512 | 544 | 7,680 | 6.6e-6 |
| chr17_7214642_C_G | chr17:7214642 | -384 | -128 | 9,728 | 2.0e-5 |
| chr17_7214686_G_A | chr17:7214686 | -384 | 1,408 | -4,864 | 6.6e-6 |
| chr17_7214799_A_T | chr17:7214799 | 256 | -608 | 5,888 | — |
| chr17_7214790_A_G | chr17:7214790 | 256 | -352 | 4,608 | — |
| chr17_7214799_A_G | chr17:7214799 | -128 | -736 | 5,632 | — |
| chr17_7214870_G_C | chr17:7214870 | 128 | -64 | 4,096 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.