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GTF2IRD1P1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near GTF2IRD1P1

chr7:66,709,992..66,944,826, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant Position PXR FXR AhR AF
chr7_66844458_G_Cchr7:668444580.1210.1790.953—   
chr7_66844586_G_Tchr7:668445860.171-0.122-0.647—   
chr7_66844599_G_Cchr7:668445990.0750.0390.513—   
chr7_66844458_G_Achr7:668444580.0590.0600.464—   
chr7_66844588_A_Gchr7:668445880.0050.0210.440—   
chr7_66844531_G_Achr7:668445310.0070.0860.427—   
chr7_66844445_G_Achr7:668444450.0010.013-0.391—   
chr7_66844522_C_Gchr7:66844522-0.008-0.052-0.379—   
chr7_66844458_G_Tchr7:668444580.0340.0620.366—   
chr7_66844428_T_Gchr7:66844428-0.0130.013-0.342—   
chr7_66844520_C_Gchr7:66844520-0.021-0.044-0.293—   
chr7_66844530_C_Gchr7:66844530-0.047-0.008-0.293—   
chr7_66844568_A_Gchr7:66844568-0.010-0.039-0.293—   
chr7_66844517_C_Gchr7:66844517-0.011-0.013-0.281—   
chr7_66844578_G_Tchr7:668445780.0730.0340.281—   
chr7_66844525_G_Tchr7:66844525-0.0150.0550.269—   
chr7_66844484_G_Tchr7:668444840.000-0.047-0.256—   
chr7_66844525_G_Cchr7:66844525-0.0090.0360.244—   
chr7_66844532_G_Tchr7:66844532-0.0180.0360.232—   
chr7_66844436_C_Achr7:66844436-0.0290.008-0.220—   
chr7_66844449_T_Achr7:668444490.0190.0360.220—   
chr7_66844536_A_Cchr7:668445360.000-0.036-0.220—   
chr7_66844578_G_Cchr7:668445780.090-0.0180.220—   
chr7_66844461_G_Achr7:668444610.0430.0420.208—   
chr7_66844519_G_Cchr7:66844519-0.0160.0260.208—   
chr7_66844527_C_Gchr7:66844527-0.034-0.023-0.208—   
chr7_66844537_C_Tchr7:66844537-0.017-0.044-0.208—   
chr7_66844554_T_Gchr7:668445540.003-0.031-0.208—   
chr7_66844437_G_Tchr7:66844437-0.0180.000-0.195—   
chr7_66844439_C_Tchr7:66844439-0.009-0.008-0.195—   
chr7_66844449_T_Cchr7:668444490.0250.0470.195—   
chr7_66844528_G_Cchr7:66844528-0.0070.0260.195—   
chr7_66844544_G_Tchr7:66844544-0.009-0.0050.195—   
chr7_66844550_C_Achr7:668445500.0090.0180.195—   
chr7_66844436_C_Gchr7:66844436-0.0290.000-0.183—   
chr7_66844445_G_Cchr7:668444450.009-0.029-0.183—   
chr7_66844525_G_Achr7:66844525-0.0280.0230.183—   
chr7_66844528_G_Tchr7:66844528-0.0180.0470.183—   
chr7_66844533_G_Achr7:668445330.0010.0210.183—   
chr7_66844533_G_Tchr7:668445330.0210.0180.183—   
chr7_66844544_G_Achr7:668445440.0020.0080.183—   
chr7_66844545_G_Tchr7:668445450.0160.0130.183—   
chr7_66844554_T_Cchr7:66844554-0.015-0.029-0.183—   
chr7_66844576_G_Tchr7:668445760.0390.0310.183—   
chr7_66844586_G_Achr7:668445860.038-0.005-0.183—   
chr7_66844600_G_Achr7:668446000.0380.005-0.183—   
chr7_66844604_G_Tchr7:668446040.014-0.023-0.183—   
chr7_66844591_C_Tchr7:668445910.0970.0080.098—   
chr7_66844427_T_Gchr7:66844427-0.0140.0160.171—   
chr7_66844431_T_Cchr7:66844431-0.0070.0080.171—   
chr7_66844447_T_Achr7:668444470.0240.0310.171—   
chr7_66844449_T_Gchr7:668444490.0060.0230.171—   
chr7_66844459_G_Cchr7:668444590.0330.0100.171—   
chr7_66844532_G_Cchr7:668445320.0110.0080.171—   
chr7_66844547_T_Gchr7:668445470.014-0.029-0.171—   
chr7_66844558_T_Cchr7:66844558-0.003-0.044-0.171—   
chr7_66844565_A_Gchr7:66844565-0.011-0.039-0.171—   
chr7_66844571_T_Gchr7:668445710.008-0.052-0.171—   
chr7_66844577_G_Cchr7:668445770.096-0.0050.085—   
chr7_66844579_G_Tchr7:668445790.0480.0390.171—   
chr7_66844580_G_Achr7:668445800.0150.0290.171—   
chr7_66844601_T_Gchr7:66844601-0.0220.003-0.171—   
chr7_66801535_G_Cchr7:66801535-0.012-0.060-0.162—   
chr7_66844423_A_Gchr7:66844423-0.016-0.023-0.159—   
chr7_66844447_T_Cchr7:668444470.0240.0080.159—   
chr7_66844507_C_Gchr7:668445070.0090.0680.159—   
chr7_66844512_A_Cchr7:668445120.0100.0100.159—   
chr7_66844514_G_Tchr7:668445140.0240.0440.159—   
chr7_66844533_G_Cchr7:668445330.024-0.0050.159—   
chr7_66844583_C_Tchr7:668445830.086-0.021-0.134—   
chr7_66801530_C_Gchr7:668015300.0080.0260.153—   
chr7_66844508_C_Achr7:66844508-0.0180.003-0.147—   
chr7_66844514_G_Cchr7:668445140.0250.0100.147—   
chr7_66844515_A_Cchr7:668445150.010-0.055-0.147—   
chr7_66844516_G_Tchr7:668445160.0190.0290.147—   
chr7_66844524_G_Achr7:66844524-0.0210.0440.147—   
chr7_66844532_G_Achr7:66844532-0.0130.0310.147—   
chr7_66844541_G_Achr7:668445410.0150.0440.147—   
chr7_66844545_G_Achr7:668445450.0200.0160.147—   
chr7_66844546_G_Achr7:668445460.0140.0260.147—   
chr7_66844557_C_Achr7:668445570.0190.0230.147—   
chr7_66844601_T_Achr7:668446010.0290.003-0.147—   
chr7_66844427_T_Achr7:66844427-0.0190.0100.134—   
chr7_66844429_G_Tchr7:66844429-0.0040.005-0.134—   
chr7_66844438_G_Cchr7:66844438-0.036-0.039-0.134—   
chr7_66844439_C_Achr7:668444390.0030.005-0.134—   
chr7_66844444_A_Gchr7:668444440.0070.0030.134—   
chr7_66844462_T_Gchr7:66844462-0.007-0.005-0.134—   
chr7_66844475_A_Gchr7:668444750.0270.0100.134—   
chr7_66844485_C_Achr7:66844485-0.0080.003-0.134—   
chr7_66844506_C_Tchr7:66844506-0.001-0.008-0.134—   
chr7_66844534_G_Achr7:66844534-0.0040.0290.134—   
chr7_66844534_G_Tchr7:66844534-0.0100.0390.134—   
chr7_66844535_G_Cchr7:668445350.0100.0080.134—   
chr7_66844535_G_Tchr7:66844535-0.0040.0290.134—   
chr7_66844553_G_Achr7:668445530.0190.0230.134—   
chr7_66844556_C_Achr7:668445560.0380.0310.134—   
chr7_66844564_G_Cchr7:66844564-0.005-0.023-0.134—   
chr7_66844578_G_Achr7:668445780.0610.0000.134—   
chr7_66844581_C_Gchr7:668445810.015-0.005-0.134—   
chr7_66844595_C_Tchr7:668445950.056-0.008-0.134—   
chr7_66844598_A_Cchr7:668445980.051-0.016-0.134—   
chr7_66844579_G_Cchr7:668445790.0710.0050.073—   
chr7_66844605_G_Tchr7:668446050.070-0.008-0.122—   
chr7_66844418_G_Tchr7:668444180.0030.003-0.122—   
chr7_66844437_G_Cchr7:66844437-0.0030.005-0.122—   
chr7_66844438_G_Achr7:66844438-0.016-0.010-0.122—   
chr7_66844461_G_Cchr7:668444610.0040.0100.122—   
chr7_66844475_A_Cchr7:668444750.0170.0050.122—   
chr7_66844486_C_Achr7:66844486-0.009-0.026-0.122—   
chr7_66844502_C_Gchr7:66844502-0.003-0.021-0.122—   
chr7_66844503_C_Achr7:66844503-0.0240.0780.122—   
chr7_66844515_A_Gchr7:668445150.021-0.0210.122—   
chr7_66844521_G_Achr7:668445210.0050.0440.122—   
chr7_66844523_C_Gchr7:66844523-0.004-0.016-0.122—   
chr7_66844528_G_Achr7:66844528-0.0220.0470.122—   
chr7_66844535_G_Achr7:66844535-0.0050.0260.122—   
chr7_66844537_C_Achr7:66844537-0.0030.0340.122—   
chr7_66844540_T_Achr7:668445400.0010.0160.122—   
chr7_66844541_G_Tchr7:66844541-0.0020.0390.122—   
chr7_66844546_G_Tchr7:668445460.0080.0310.122—   
chr7_66844548_C_Tchr7:66844548-0.0040.0310.122—   
chr7_66844553_G_Tchr7:66844553-0.0190.0100.122—   
chr7_66844567_G_Tchr7:668445670.0380.0390.122—   
chr7_66844594_C_Tchr7:668445940.046-0.005-0.122—   
chr7_66844598_A_Tchr7:668445980.0550.000-0.122—   
chr7_66844602_G_Achr7:668446020.010-0.005-0.122—   
chr7_66801562_G_Achr7:668015620.0680.0160.024—   
chr7_66801529_C_Gchr7:668015290.0140.0340.119—   
chr7_66844591_C_Gchr7:668445910.067-0.0080.012—   
chr7_66801514_G_Cchr7:66801514-0.004-0.056-0.116—   
chr7_66801546_C_Gchr7:668015460.0650.0210.076—   
chr7_66801518_T_Cchr7:66801518-0.009-0.051-0.110—   
chr7_66801542_A_Gchr7:668015420.0620.0080.104—   
chr7_66844418_G_Achr7:66844418-0.0060.013-0.110—   
chr7_66844419_C_Achr7:668444190.0110.003-0.110—   
chr7_66844437_G_Achr7:66844437-0.026-0.005-0.110—   
chr7_66844443_C_Tchr7:668444430.0180.0440.110—   
chr7_66844446_C_Gchr7:668444460.0090.0290.110—   
chr7_66844447_T_Gchr7:668444470.0130.0030.110—   
chr7_66844448_G_Cchr7:668444480.0080.0230.110—   
chr7_66844448_G_Tchr7:668444480.0090.0520.110—   
chr7_66844454_A_Tchr7:66844454-0.012-0.008-0.110—   
chr7_66844455_T_Gchr7:66844455-0.013-0.003-0.110—   
chr7_66844467_C_Tchr7:66844467-0.0100.005-0.110—   
chr7_66844470_C_Gchr7:668444700.0210.0100.110—   
chr7_66844477_C_Gchr7:66844477-0.0070.000-0.110—   
chr7_66844477_C_Tchr7:66844477-0.0200.008-0.110—   
chr7_66844479_G_Cchr7:668444790.0220.0080.110—   
chr7_66844479_G_Tchr7:668444790.0150.0290.110—   
chr7_66844480_G_Cchr7:668444800.0230.0260.110—   
chr7_66844489_A_Gchr7:668444890.025-0.0030.110—   
chr7_66844502_C_Tchr7:668445020.0130.010-0.110—   
chr7_66844505_G_Achr7:668445050.003-0.013-0.110—   
chr7_66844505_G_Cchr7:66844505-0.004-0.021-0.110—   
chr7_66844509_A_Cchr7:668445090.0260.0210.110—   
chr7_66844524_G_Tchr7:66844524-0.0520.0420.110—   
chr7_66844526_G_Tchr7:66844526-0.0160.0290.110—   
chr7_66844527_C_Tchr7:66844527-0.0180.0440.110—   
chr7_66844536_A_Tchr7:66844536-0.0110.008-0.110—   
chr7_66844538_G_Achr7:668445380.0020.0520.110—   
chr7_66844540_T_Gchr7:668445400.015-0.039-0.110—   
chr7_66844545_G_Cchr7:668445450.032-0.0030.110—   
chr7_66844547_T_Cchr7:668445470.022-0.013-0.110—   
chr7_66844550_C_Tchr7:668445500.0010.0050.110—   
chr7_66844574_T_Achr7:668445740.0060.0080.110—   
chr7_66844577_G_Tchr7:668445770.0400.0180.110—   
chr7_66844586_G_Cchr7:668445860.019-0.023-0.110—   
chr7_66844587_T_Gchr7:66844587-0.013-0.023-0.110—   
chr7_66844593_G_Tchr7:668445930.021-0.021-0.110—   
chr7_66844594_C_Achr7:668445940.031-0.003-0.110—   
chr7_66844602_G_Tchr7:668446020.0020.039-0.110—   
chr7_66801560_T_Gchr7:668015600.0540.0130.107—   
chr7_66844577_G_Achr7:668445770.058-0.0030.085—   
chr7_66801521_C_Gchr7:668015210.0060.0210.101—   
chr7_66801558_T_Cchr7:668015580.056-0.0130.015—   
chr7_66801560_T_Achr7:668015600.0560.0310.101—   
chr7_66844593_G_Cchr7:66844593-0.056-0.0030.012—   
chr7_66844579_G_Achr7:668445790.0560.0080.098—   
chr7_66801542_A_Cchr7:668015420.0550.0080.073—   
chr7_66801544_T_Gchr7:668015440.0450.0180.098—   
chr7_66801547_C_Gchr7:668015470.0440.0230.098—   
chr7_66844419_C_Tchr7:668444190.0040.003-0.098—   
chr7_66844428_T_Cchr7:668444280.006-0.026-0.098—   
chr7_66844429_G_Cchr7:66844429-0.001-0.016-0.098—   
chr7_66844435_A_Cchr7:66844435-0.018-0.023-0.098—   
chr7_66844439_C_Gchr7:66844439-0.0140.000-0.098—   
chr7_66844445_G_Tchr7:668444450.0080.008-0.098—   
chr7_66844452_A_Gchr7:66844452-0.006-0.018-0.098—   
chr7_66844460_G_Cchr7:668444600.0120.0050.098—   
chr7_66844461_G_Tchr7:668444610.0100.0340.098—   
chr7_66844466_G_Tchr7:668444660.0000.005-0.098—   
chr7_66844469_C_Tchr7:668444690.0090.013-0.098—   
chr7_66844474_A_Cchr7:668444740.0150.0030.098—   
chr7_66844477_C_Achr7:66844477-0.026-0.010-0.098—   
chr7_66844483_A_Cchr7:668444830.0100.0080.098—   
chr7_66844493_G_Cchr7:668444930.0190.0160.098—   
chr7_66844501_G_Achr7:66844501-0.007-0.010-0.098—   
chr7_66844503_C_Gchr7:668445030.0050.0160.098—   
chr7_66844508_C_Tchr7:668445080.0030.003-0.098—   

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.