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HIGD1A
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near HIGD1A
chr3:42,682,907..42,904,535, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr3_42760647_T_G | chr3:42760647 | 1.000 | 1.000 | 1.000 | — |
| chr3_42760601_T_G | chr3:42760601 | 1.000 | 1.000 | 1.000 | — |
| chr3_42760622_C_A | chr3:42760622 | 1.000 | 0.863 | 0.841 | — |
| chr3_42760668_C_A | chr3:42760668 | 1.000 | 0.937 | 1.000 | — |
| chr3_42760663_T_G | chr3:42760663 | -0.892 | -1.000 | -1.000 | — |
| chr3_42760693_T_G | chr3:42760693 | 0.807 | 0.799 | 0.779 | — |
| chr3_42760713_C_T | chr3:42760713 | 0.807 | 0.553 | 0.988 | — |
| chr3_42760709_T_G | chr3:42760709 | -0.681 | -1.000 | -0.929 | — |
| chr3_42760713_C_A | chr3:42760713 | 0.667 | 0.563 | 0.609 | — |
| chr3_42760714_C_A | chr3:42760714 | 0.664 | 0.523 | 0.732 | — |
| chr3_42760703_C_A | chr3:42760703 | 0.662 | 0.662 | 0.562 | — |
| chr3_42760667_C_T | chr3:42760667 | 0.656 | 0.713 | 1.000 | — |
| chr3_42760621_C_T | chr3:42760621 | 0.579 | 0.536 | 0.850 | — |
| chr3_42760662_T_C | chr3:42760662 | -0.572 | -0.967 | -0.724 | — |
| chr3_42760657_C_A | chr3:42760657 | 0.567 | 0.556 | 0.506 | — |
| chr3_42760568_G_T | chr3:42760568 | 0.565 | 0.731 | 0.638 | — |
| chr3_42760574_G_C | chr3:42760574 | 0.551 | 0.789 | 0.359 | — |
| chr3_42760617_T_G | chr3:42760617 | -0.544 | -1.000 | -0.444 | — |
| chr3_42760575_C_T | chr3:42760575 | 0.542 | 0.170 | 0.700 | — |
| chr3_42760577_A_T | chr3:42760577 | 0.541 | 0.642 | 0.485 | — |
| chr3_42760667_C_A | chr3:42760667 | 0.534 | 0.609 | 0.550 | — |
| chr3_42760709_T_C | chr3:42760709 | -0.517 | -0.716 | -0.571 | — |
| chr3_42760663_T_C | chr3:42760663 | -0.514 | -0.779 | -0.374 | 0.0020% |
| chr3_42760708_T_C | chr3:42760708 | -0.505 | -0.898 | -0.697 | — |
| chr3_42760721_T_C | chr3:42760721 | -0.488 | -0.490 | -0.721 | — |
| chr3_42760662_T_G | chr3:42760662 | -0.478 | -0.787 | -0.571 | — |
| chr3_42760721_T_A | chr3:42760721 | -0.461 | -0.528 | -0.650 | — |
| chr3_42760660_G_T | chr3:42760660 | 0.458 | 0.617 | 0.476 | — |
| chr3_42760706_G_T | chr3:42760706 | 0.444 | 0.490 | 0.368 | — |
| chr3_42760611_C_A | chr3:42760611 | 0.441 | 0.464 | 0.476 | — |
| chr3_42760710_G_C | chr3:42760710 | -0.428 | -0.751 | -0.597 | — |
| chr3_42760693_T_C | chr3:42760693 | 0.423 | 0.543 | 0.379 | — |
| chr3_42760664_G_C | chr3:42760664 | -0.422 | -0.858 | -0.474 | — |
| chr3_42760721_T_G | chr3:42760721 | -0.418 | -0.406 | -0.632 | — |
| chr3_42760722_T_C | chr3:42760722 | -0.418 | -0.574 | -0.638 | — |
| chr3_42760709_T_A | chr3:42760709 | -0.410 | -0.662 | -0.521 | — |
| chr3_42760574_G_T | chr3:42760574 | 0.408 | 0.398 | 0.297 | — |
| chr3_42760725_A_C | chr3:42760725 | -0.403 | -0.437 | -0.529 | — |
| chr3_42760663_T_A | chr3:42760663 | -0.401 | -0.685 | -0.326 | — |
| chr3_42760621_C_A | chr3:42760621 | 0.393 | 0.386 | 0.285 | — |
| chr3_42760665_C_T | chr3:42760665 | -0.393 | -0.467 | -0.465 | 0.0040% |
| chr3_42760567_A_T | chr3:42760567 | 0.389 | 0.365 | 0.465 | — |
| chr3_42760708_T_G | chr3:42760708 | -0.380 | -0.754 | -0.541 | — |
| chr3_42760724_C_G | chr3:42760724 | -0.317 | -0.490 | -0.671 | — |
| chr3_42760637_T_G | chr3:42760637 | 0.376 | 0.350 | 0.268 | — |
| chr3_42760614_G_T | chr3:42760614 | 0.372 | 0.452 | 0.441 | — |
| chr3_42760723_C_T | chr3:42760723 | -0.295 | -0.419 | -0.656 | 0.0013% |
| chr3_42760581_C_G | chr3:42760581 | 0.370 | 0.261 | 0.294 | — |
| chr3_42760567_A_C | chr3:42760567 | 0.369 | 0.320 | 0.468 | — |
| chr3_42760723_C_G | chr3:42760723 | -0.252 | -0.439 | -0.641 | — |
| chr3_42760727_C_T | chr3:42760727 | 0.363 | 0.165 | 0.147 | — |
| chr3_42760675_C_T | chr3:42760675 | 0.362 | 0.353 | 0.476 | — |
| chr3_42760694_G_A | chr3:42760694 | 0.359 | 0.378 | 0.312 | — |
| chr3_42760648_G_C | chr3:42760648 | 0.357 | 0.485 | 0.256 | — |
| chr3_42760669_A_T | chr3:42760669 | -0.353 | -0.548 | -0.418 | — |
| chr3_42760724_C_A | chr3:42760724 | -0.314 | -0.401 | -0.624 | — |
| chr3_42760633_A_G | chr3:42760633 | 0.351 | 0.297 | 0.406 | — |
| chr3_42760568_G_C | chr3:42760568 | 0.348 | 0.416 | 0.515 | — |
| chr3_42760715_A_T | chr3:42760715 | -0.348 | -0.584 | -0.462 | — |
| chr3_42760723_C_A | chr3:42760723 | -0.257 | -0.391 | -0.609 | — |
| chr3_42760711_C_T | chr3:42760711 | -0.336 | -0.454 | -0.465 | — |
| chr3_42760671_G_A | chr3:42760671 | 0.335 | 0.419 | 0.412 | — |
| chr3_42760720_A_C | chr3:42760720 | -0.313 | -0.497 | -0.582 | — |
| chr3_42760581_C_A | chr3:42760581 | 0.323 | 0.226 | 0.276 | — |
| chr3_42760585_C_T | chr3:42760585 | 0.316 | 0.325 | 0.244 | — |
| chr3_42760625_G_A | chr3:42760625 | 0.315 | 0.360 | 0.268 | — |
| chr3_42760665_C_G | chr3:42760665 | -0.315 | -0.429 | -0.326 | — |
| chr3_42760626_G_T | chr3:42760626 | 0.313 | 0.365 | 0.485 | — |
| chr3_42760717_T_C | chr3:42760717 | 0.313 | 0.208 | 0.309 | — |
| chr3_42760720_A_T | chr3:42760720 | -0.271 | -0.419 | -0.550 | — |
| chr3_42760711_C_G | chr3:42760711 | -0.300 | -0.503 | -0.415 | — |
| chr3_42760672_G_T | chr3:42760672 | 0.300 | 0.289 | 0.432 | — |
| chr3_42760683_T_G | chr3:42760683 | 0.297 | 0.170 | 0.235 | — |
| chr3_42760712_G_C | chr3:42760712 | -0.248 | -0.480 | -0.524 | — |
| chr3_42760576_C_T | chr3:42760576 | 0.295 | 0.249 | 0.241 | — |
| chr3_42760716_T_A | chr3:42760716 | -0.295 | -0.500 | -0.441 | — |
| chr3_42760719_C_T | chr3:42760719 | -0.293 | -0.335 | -0.521 | — |
| chr3_42760630_T_A | chr3:42760630 | 0.293 | 0.228 | 0.256 | — |
| chr3_42760648_G_T | chr3:42760648 | 0.290 | 0.320 | 0.359 | — |
| chr3_42760676_T_G | chr3:42760676 | 0.290 | 0.185 | 0.306 | — |
| chr3_42760618_G_C | chr3:42760618 | -0.288 | -0.668 | -0.297 | — |
| chr3_42760701_G_C | chr3:42760701 | 0.288 | 0.452 | 0.150 | — |
| chr3_42760689_A_G | chr3:42760689 | 0.286 | 0.218 | 0.209 | — |
| chr3_42760565_C_A | chr3:42760565 | 0.285 | 0.386 | 0.282 | — |
| chr3_42760717_T_A | chr3:42760717 | 0.283 | 0.208 | 0.274 | — |
| chr3_42760587_A_G | chr3:42760587 | 0.281 | 0.282 | 0.282 | — |
| chr3_42760706_G_C | chr3:42760706 | 0.281 | 0.287 | 0.274 | — |
| chr3_42760715_A_C | chr3:42760715 | -0.280 | -0.434 | -0.400 | — |
| chr3_42760580_G_T | chr3:42760580 | 0.278 | -0.051 | 0.212 | — |
| chr3_42760661_A_C | chr3:42760661 | -0.276 | -0.439 | -0.297 | — |
| chr3_42760630_T_G | chr3:42760630 | 0.274 | 0.216 | 0.388 | — |
| chr3_42760631_C_A | chr3:42760631 | 0.274 | 0.056 | 0.165 | — |
| chr3_42760660_G_C | chr3:42760660 | 0.274 | 0.320 | 0.294 | — |
| chr3_42760576_C_G | chr3:42760576 | 0.269 | -0.010 | 0.168 | — |
| chr3_42760629_C_T | chr3:42760629 | 0.269 | 0.201 | 0.350 | — |
| chr3_42760550_G_A | chr3:42760550 | 0.266 | 0.551 | 0.353 | — |
| chr3_42760703_C_G | chr3:42760703 | 0.266 | 0.173 | 0.324 | — |
| chr3_42760627_C_G | chr3:42760627 | 0.265 | 0.259 | 0.253 | — |
| chr3_42760662_T_A | chr3:42760662 | -0.265 | -0.581 | -0.356 | — |
| chr3_42760629_C_A | chr3:42760629 | 0.265 | 0.244 | 0.259 | — |
| chr3_42760703_C_T | chr3:42760703 | 0.265 | 0.165 | 0.253 | — |
| chr3_42760634_G_A | chr3:42760634 | 0.264 | 0.350 | 0.388 | — |
| chr3_42760576_C_A | chr3:42760576 | 0.261 | 0.061 | 0.085 | — |
| chr3_42760661_A_T | chr3:42760661 | -0.260 | -0.419 | -0.315 | — |
| chr3_42760665_C_A | chr3:42760665 | -0.260 | -0.373 | -0.329 | — |
| chr3_42760711_C_A | chr3:42760711 | -0.259 | -0.391 | -0.359 | <0.001% |
| chr3_42760705_A_G | chr3:42760705 | 0.258 | 0.201 | 0.335 | — |
| chr3_42760637_T_C | chr3:42760637 | 0.256 | 0.193 | 0.203 | <0.001% |
| chr3_42760722_T_G | chr3:42760722 | -0.253 | -0.378 | -0.438 | — |
| chr3_42760715_A_G | chr3:42760715 | -0.251 | -0.424 | -0.356 | — |
| chr3_42760605_G_C | chr3:42760605 | 0.250 | 0.236 | 0.241 | — |
| chr3_42760577_A_G | chr3:42760577 | 0.249 | 0.056 | 0.271 | — |
| chr3_42760617_T_C | chr3:42760617 | -0.248 | -0.444 | 0.015 | — |
| chr3_42760633_A_C | chr3:42760633 | 0.248 | 0.289 | 0.406 | — |
| chr3_42760724_C_T | chr3:42760724 | -0.218 | -0.254 | -0.429 | — |
| chr3_42760545_A_G | chr3:42760545 | 0.242 | 0.693 | 0.221 | — |
| chr3_42760683_T_A | chr3:42760683 | 0.242 | 0.203 | 0.215 | — |
| chr3_42760601_T_C | chr3:42760601 | 0.241 | 0.228 | 0.406 | — |
| chr3_42760630_T_C | chr3:42760630 | 0.240 | 0.053 | 0.179 | — |
| chr3_42760673_C_G | chr3:42760673 | 0.240 | 0.282 | 0.247 | — |
| chr3_42760574_G_A | chr3:42760574 | 0.240 | 0.256 | 0.176 | — |
| chr3_42760692_T_G | chr3:42760692 | 0.239 | 0.142 | 0.147 | — |
| chr3_42760697_G_C | chr3:42760697 | 0.239 | 0.180 | 0.197 | — |
| chr3_42760669_A_G | chr3:42760669 | -0.238 | -0.345 | -0.203 | — |
| chr3_42760720_A_G | chr3:42760720 | -0.196 | -0.368 | -0.421 | — |
| chr3_42760636_C_G | chr3:42760636 | 0.236 | 0.556 | 0.388 | — |
| chr3_42760648_G_A | chr3:42760648 | 0.236 | 0.226 | 0.229 | — |
| chr3_42760671_G_C | chr3:42760671 | 0.236 | 0.305 | 0.376 | — |
| chr3_42760567_A_G | chr3:42760567 | 0.233 | 0.096 | 0.224 | — |
| chr3_42760705_A_C | chr3:42760705 | 0.233 | 0.140 | 0.288 | — |
| chr3_42760633_A_T | chr3:42760633 | 0.232 | 0.180 | 0.250 | — |
| chr3_42760670_T_A | chr3:42760670 | -0.231 | -0.462 | -0.321 | — |
| chr3_42760599_G_T | chr3:42760599 | 0.230 | 0.264 | 0.132 | — |
| chr3_42760680_G_A | chr3:42760680 | 0.229 | 0.363 | 0.321 | — |
| chr3_42760699_G_T | chr3:42760699 | 0.229 | 0.066 | 0.121 | — |
| chr3_42760590_C_G | chr3:42760590 | 0.228 | 0.404 | 0.376 | — |
| chr3_42760712_G_T | chr3:42760712 | -0.213 | -0.426 | -0.403 | — |
| chr3_42760575_C_A | chr3:42760575 | 0.228 | 0.061 | 0.103 | — |
| chr3_42760614_G_C | chr3:42760614 | 0.227 | 0.266 | 0.359 | — |
| chr3_42760641_C_A | chr3:42760641 | 0.227 | 0.348 | 0.124 | — |
| chr3_42760570_T_A | chr3:42760570 | 0.227 | 0.033 | 0.276 | — |
| chr3_42760572_G_A | chr3:42760572 | 0.227 | 0.086 | 0.179 | — |
| chr3_42760722_T_A | chr3:42760722 | -0.178 | -0.305 | -0.400 | — |
| chr3_42760602_G_T | chr3:42760602 | 0.225 | 0.282 | 0.318 | 0.0013% |
| chr3_42760698_T_A | chr3:42760698 | 0.225 | 0.079 | 0.109 | — |
| chr3_42760577_A_C | chr3:42760577 | 0.224 | 0.122 | 0.138 | — |
| chr3_42760645_G_T | chr3:42760645 | 0.224 | 0.246 | 0.106 | — |
| chr3_42760673_C_A | chr3:42760673 | 0.224 | 0.152 | 0.206 | — |
| chr3_42760679_A_G | chr3:42760679 | 0.224 | 0.259 | 0.312 | — |
| chr3_42760555_T_C | chr3:42760555 | 0.223 | 0.409 | 0.309 | — |
| chr3_42760602_G_C | chr3:42760602 | 0.221 | 0.274 | 0.150 | — |
| chr3_42760685_G_A | chr3:42760685 | 0.220 | 0.162 | 0.091 | — |
| chr3_42760643_A_G | chr3:42760643 | 0.218 | 0.124 | 0.309 | — |
| chr3_42760669_A_C | chr3:42760669 | -0.218 | -0.312 | -0.215 | — |
| chr3_42760679_A_T | chr3:42760679 | 0.218 | 0.157 | 0.215 | — |
| chr3_42760616_T_C | chr3:42760616 | -0.218 | -0.596 | -0.159 | — |
| chr3_42760679_A_C | chr3:42760679 | 0.217 | 0.211 | 0.303 | — |
| chr3_42760569_A_G | chr3:42760569 | 0.217 | 0.261 | 0.276 | — |
| chr3_42760586_C_T | chr3:42760586 | 0.216 | 0.272 | 0.182 | — |
| chr3_42760683_T_C | chr3:42760683 | 0.215 | 0.074 | 0.153 | — |
| chr3_42760641_C_G | chr3:42760641 | 0.215 | 0.444 | 0.232 | — |
| chr3_42760718_G_C | chr3:42760718 | -0.151 | -0.266 | -0.379 | — |
| chr3_42760719_C_A | chr3:42760719 | -0.215 | -0.244 | -0.359 | — |
| chr3_42760627_C_A | chr3:42760627 | 0.213 | 0.147 | 0.165 | — |
| chr3_42760674_A_G | chr3:42760674 | 0.213 | 0.056 | 0.321 | 0.0020% |
| chr3_42760588_G_A | chr3:42760588 | 0.211 | 0.272 | 0.306 | 0.0046% |
| chr3_42760677_C_A | chr3:42760677 | 0.211 | 0.025 | 0.091 | — |
| chr3_42760718_G_T | chr3:42760718 | -0.175 | -0.241 | -0.371 | — |
| chr3_42760585_C_A | chr3:42760585 | 0.207 | 0.063 | 0.212 | — |
| chr3_42760591_T_C | chr3:42760591 | 0.206 | 0.165 | 0.159 | — |
| chr3_42760642_G_C | chr3:42760642 | 0.206 | 0.533 | 0.253 | — |
| chr3_42760700_A_T | chr3:42760700 | 0.206 | 0.117 | 0.091 | — |
| chr3_42760629_C_G | chr3:42760629 | 0.205 | 0.203 | 0.259 | — |
| chr3_42760696_A_C | chr3:42760696 | 0.205 | 0.086 | 0.265 | — |
| chr3_42760570_T_G | chr3:42760570 | 0.204 | 0.066 | 0.238 | — |
| chr3_42760609_G_C | chr3:42760609 | 0.204 | 0.201 | 0.129 | — |
| chr3_42742821_C_A | chr3:42742821 | 0.081 | 0.079 | 0.359 | — |
| chr3_42760699_G_C | chr3:42760699 | 0.200 | 0.096 | 0.147 | — |
| chr3_42760540_C_T | chr3:42760540 | -0.199 | -0.292 | -0.250 | — |
| chr3_42760653_G_T | chr3:42760653 | 0.199 | 0.074 | 0.059 | — |
| chr3_42760674_A_C | chr3:42760674 | 0.198 | 0.180 | 0.276 | — |
| chr3_42760719_C_G | chr3:42760719 | -0.171 | -0.223 | -0.350 | — |
| chr3_42760643_A_C | chr3:42760643 | 0.197 | 0.025 | 0.244 | — |
| chr3_42760655_G_C | chr3:42760655 | 0.197 | 0.327 | 0.035 | — |
| chr3_42760647_T_C | chr3:42760647 | 0.196 | 0.188 | 0.262 | — |
| chr3_42760539_C_G | chr3:42760539 | -0.196 | -0.307 | -0.229 | — |
| chr3_42760675_C_A | chr3:42760675 | 0.196 | 0.150 | 0.232 | — |
| chr3_42760708_T_A | chr3:42760708 | -0.196 | -0.546 | -0.224 | — |
| chr3_42760628_A_G | chr3:42760628 | 0.195 | 0.020 | 0.291 | — |
| chr3_42760582_A_T | chr3:42760582 | 0.194 | -0.046 | 0.088 | — |
| chr3_42760608_A_T | chr3:42760608 | 0.194 | 0.084 | 0.197 | — |
| chr3_42760584_T_G | chr3:42760584 | 0.193 | -0.005 | 0.318 | — |
| chr3_42760597_A_C | chr3:42760597 | 0.186 | 0.066 | 0.341 | — |
| chr3_42760702_C_G | chr3:42760702 | 0.191 | 0.033 | 0.171 | — |
| chr3_42760674_A_T | chr3:42760674 | 0.190 | 0.086 | 0.203 | — |
| chr3_42760726_A_G | chr3:42760726 | -0.190 | -0.259 | -0.262 | — |
| chr3_42760666_G_A | chr3:42760666 | -0.158 | -0.216 | -0.332 | <0.001% |
| chr3_42760716_T_G | chr3:42760716 | -0.188 | -0.312 | -0.279 | — |
| chr3_42760540_C_A | chr3:42760540 | -0.186 | -0.282 | -0.182 | — |
| chr3_42760538_A_T | chr3:42760538 | -0.186 | -0.292 | -0.229 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.