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HIGD1A
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near HIGD1A
chr3:42,682,907..42,904,535, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr3_42760647_T_G | chr3:42760647 | 1.000 | 1.000 | 1.000 | — |
| chr3_42760601_T_G | chr3:42760601 | 1.000 | 1.000 | 1.000 | — |
| chr3_42760622_C_A | chr3:42760622 | 1.000 | 0.883 | 0.873 | — |
| chr3_42760668_C_A | chr3:42760668 | 1.000 | 0.958 | 1.000 | — |
| chr3_42760663_T_G | chr3:42760663 | -0.916 | -1.000 | -1.000 | — |
| chr3_42760693_T_G | chr3:42760693 | 0.829 | 0.818 | 0.809 | — |
| chr3_42760713_C_T | chr3:42760713 | 0.829 | 0.566 | 1.000 | — |
| chr3_42760709_T_G | chr3:42760709 | -0.700 | -1.000 | -0.965 | — |
| chr3_42760713_C_A | chr3:42760713 | 0.685 | 0.577 | 0.632 | — |
| chr3_42760714_C_A | chr3:42760714 | 0.682 | 0.535 | 0.760 | — |
| chr3_42760703_C_A | chr3:42760703 | 0.680 | 0.678 | 0.583 | — |
| chr3_42760667_C_T | chr3:42760667 | 0.674 | 0.730 | 1.000 | — |
| chr3_42760621_C_T | chr3:42760621 | 0.595 | 0.548 | 0.882 | — |
| chr3_42760662_T_C | chr3:42760662 | -0.588 | -0.990 | -0.751 | — |
| chr3_42760657_C_A | chr3:42760657 | 0.583 | 0.569 | 0.525 | — |
| chr3_42760568_G_T | chr3:42760568 | 0.581 | 0.748 | 0.663 | — |
| chr3_42760574_G_C | chr3:42760574 | 0.566 | 0.808 | 0.373 | — |
| chr3_42760617_T_G | chr3:42760617 | -0.559 | -1.000 | -0.461 | — |
| chr3_42760575_C_T | chr3:42760575 | 0.557 | 0.174 | 0.727 | — |
| chr3_42760577_A_T | chr3:42760577 | 0.556 | 0.657 | 0.504 | — |
| chr3_42760667_C_A | chr3:42760667 | 0.549 | 0.623 | 0.571 | — |
| chr3_42760709_T_C | chr3:42760709 | -0.531 | -0.732 | -0.592 | — |
| chr3_42760663_T_C | chr3:42760663 | -0.528 | -0.797 | -0.388 | 0.0020% |
| chr3_42760708_T_C | chr3:42760708 | -0.519 | -0.919 | -0.724 | — |
| chr3_42760721_T_C | chr3:42760721 | -0.501 | -0.501 | -0.748 | — |
| chr3_42760662_T_G | chr3:42760662 | -0.491 | -0.805 | -0.592 | — |
| chr3_42760721_T_A | chr3:42760721 | -0.474 | -0.540 | -0.675 | — |
| chr3_42760660_G_T | chr3:42760660 | 0.471 | 0.631 | 0.495 | — |
| chr3_42760706_G_T | chr3:42760706 | 0.456 | 0.501 | 0.382 | — |
| chr3_42760611_C_A | chr3:42760611 | 0.453 | 0.475 | 0.495 | — |
| chr3_42760710_G_C | chr3:42760710 | -0.440 | -0.769 | -0.620 | — |
| chr3_42760693_T_C | chr3:42760693 | 0.434 | 0.556 | 0.394 | — |
| chr3_42760664_G_C | chr3:42760664 | -0.433 | -0.878 | -0.492 | — |
| chr3_42760721_T_G | chr3:42760721 | -0.429 | -0.416 | -0.656 | — |
| chr3_42760722_T_C | chr3:42760722 | -0.429 | -0.587 | -0.663 | — |
| chr3_42760709_T_A | chr3:42760709 | -0.421 | -0.678 | -0.540 | — |
| chr3_42760574_G_T | chr3:42760574 | 0.419 | 0.408 | 0.308 | — |
| chr3_42760725_A_C | chr3:42760725 | -0.414 | -0.447 | -0.550 | — |
| chr3_42760663_T_A | chr3:42760663 | -0.412 | -0.701 | -0.339 | — |
| chr3_42760621_C_A | chr3:42760621 | 0.403 | 0.395 | 0.296 | — |
| chr3_42760665_C_T | chr3:42760665 | -0.403 | -0.478 | -0.482 | 0.0040% |
| chr3_42760567_A_T | chr3:42760567 | 0.400 | 0.374 | 0.482 | — |
| chr3_42760708_T_G | chr3:42760708 | -0.391 | -0.771 | -0.562 | — |
| chr3_42760724_C_G | chr3:42760724 | -0.326 | -0.501 | -0.696 | — |
| chr3_42760637_T_G | chr3:42760637 | 0.386 | 0.358 | 0.278 | — |
| chr3_42760614_G_T | chr3:42760614 | 0.382 | 0.462 | 0.458 | — |
| chr3_42760723_C_T | chr3:42760723 | -0.303 | -0.429 | -0.681 | 0.0013% |
| chr3_42760581_C_G | chr3:42760581 | 0.380 | 0.268 | 0.305 | — |
| chr3_42760567_A_C | chr3:42760567 | 0.379 | 0.327 | 0.485 | — |
| chr3_42760723_C_G | chr3:42760723 | -0.259 | -0.449 | -0.666 | — |
| chr3_42760727_C_T | chr3:42760727 | 0.373 | 0.169 | 0.153 | — |
| chr3_42760675_C_T | chr3:42760675 | 0.372 | 0.361 | 0.495 | — |
| chr3_42760694_G_A | chr3:42760694 | 0.369 | 0.387 | 0.324 | — |
| chr3_42760648_G_C | chr3:42760648 | 0.367 | 0.496 | 0.266 | — |
| chr3_42760669_A_T | chr3:42760669 | -0.362 | -0.561 | -0.434 | — |
| chr3_42760724_C_A | chr3:42760724 | -0.323 | -0.410 | -0.647 | — |
| chr3_42760633_A_G | chr3:42760633 | 0.361 | 0.304 | 0.421 | — |
| chr3_42760568_G_C | chr3:42760568 | 0.358 | 0.426 | 0.534 | — |
| chr3_42760715_A_T | chr3:42760715 | -0.357 | -0.597 | -0.479 | — |
| chr3_42760723_C_A | chr3:42760723 | -0.264 | -0.400 | -0.632 | — |
| chr3_42760711_C_T | chr3:42760711 | -0.345 | -0.465 | -0.482 | — |
| chr3_42760671_G_A | chr3:42760671 | 0.344 | 0.429 | 0.427 | — |
| chr3_42760720_A_C | chr3:42760720 | -0.321 | -0.509 | -0.605 | — |
| chr3_42760581_C_A | chr3:42760581 | 0.332 | 0.231 | 0.287 | — |
| chr3_42760585_C_T | chr3:42760585 | 0.324 | 0.332 | 0.253 | — |
| chr3_42760625_G_A | chr3:42760625 | 0.324 | 0.369 | 0.278 | — |
| chr3_42760665_C_G | chr3:42760665 | -0.324 | -0.439 | -0.339 | — |
| chr3_42760626_G_T | chr3:42760626 | 0.321 | 0.374 | 0.504 | — |
| chr3_42760717_T_C | chr3:42760717 | 0.321 | 0.213 | 0.321 | — |
| chr3_42760720_A_T | chr3:42760720 | -0.279 | -0.429 | -0.571 | — |
| chr3_42760711_C_G | chr3:42760711 | -0.309 | -0.514 | -0.431 | — |
| chr3_42760672_G_T | chr3:42760672 | 0.308 | 0.296 | 0.449 | — |
| chr3_42760683_T_G | chr3:42760683 | 0.305 | 0.174 | 0.244 | — |
| chr3_42760712_G_C | chr3:42760712 | -0.255 | -0.491 | -0.544 | — |
| chr3_42760576_C_T | chr3:42760576 | 0.303 | 0.255 | 0.250 | — |
| chr3_42760716_T_A | chr3:42760716 | -0.303 | -0.512 | -0.458 | — |
| chr3_42760719_C_T | chr3:42760719 | -0.301 | -0.343 | -0.540 | — |
| chr3_42760630_T_A | chr3:42760630 | 0.301 | 0.234 | 0.266 | — |
| chr3_42760648_G_T | chr3:42760648 | 0.298 | 0.327 | 0.373 | — |
| chr3_42760676_T_G | chr3:42760676 | 0.297 | 0.190 | 0.318 | — |
| chr3_42760618_G_C | chr3:42760618 | -0.296 | -0.683 | -0.308 | — |
| chr3_42760701_G_C | chr3:42760701 | 0.296 | 0.462 | 0.156 | — |
| chr3_42760689_A_G | chr3:42760689 | 0.294 | 0.223 | 0.217 | — |
| chr3_42760565_C_A | chr3:42760565 | 0.292 | 0.395 | 0.293 | — |
| chr3_42760717_T_A | chr3:42760717 | 0.291 | 0.213 | 0.284 | — |
| chr3_42760587_A_G | chr3:42760587 | 0.289 | 0.288 | 0.293 | — |
| chr3_42760706_G_C | chr3:42760706 | 0.289 | 0.294 | 0.284 | — |
| chr3_42760715_A_C | chr3:42760715 | -0.288 | -0.444 | -0.415 | — |
| chr3_42760580_G_T | chr3:42760580 | 0.286 | -0.052 | 0.220 | — |
| chr3_42760661_A_C | chr3:42760661 | -0.284 | -0.449 | -0.308 | — |
| chr3_42760630_T_G | chr3:42760630 | 0.281 | 0.221 | 0.403 | — |
| chr3_42760631_C_A | chr3:42760631 | 0.281 | 0.057 | 0.171 | — |
| chr3_42760660_G_C | chr3:42760660 | 0.281 | 0.327 | 0.305 | — |
| chr3_42760576_C_G | chr3:42760576 | 0.276 | -0.010 | 0.174 | — |
| chr3_42760629_C_T | chr3:42760629 | 0.276 | 0.205 | 0.363 | — |
| chr3_42760550_G_A | chr3:42760550 | 0.274 | 0.564 | 0.366 | — |
| chr3_42760703_C_G | chr3:42760703 | 0.274 | 0.177 | 0.336 | — |
| chr3_42760627_C_G | chr3:42760627 | 0.273 | 0.265 | 0.263 | — |
| chr3_42760662_T_A | chr3:42760662 | -0.273 | -0.595 | -0.369 | — |
| chr3_42760629_C_A | chr3:42760629 | 0.272 | 0.249 | 0.269 | — |
| chr3_42760703_C_T | chr3:42760703 | 0.272 | 0.169 | 0.263 | — |
| chr3_42760634_G_A | chr3:42760634 | 0.271 | 0.358 | 0.403 | — |
| chr3_42760576_C_A | chr3:42760576 | 0.268 | 0.062 | 0.089 | — |
| chr3_42760661_A_T | chr3:42760661 | -0.268 | -0.429 | -0.327 | — |
| chr3_42760665_C_A | chr3:42760665 | -0.267 | -0.382 | -0.342 | — |
| chr3_42760711_C_A | chr3:42760711 | -0.266 | -0.400 | -0.373 | <0.001% |
| chr3_42760705_A_G | chr3:42760705 | 0.265 | 0.205 | 0.348 | — |
| chr3_42760637_T_C | chr3:42760637 | 0.263 | 0.197 | 0.211 | <0.001% |
| chr3_42760722_T_G | chr3:42760722 | -0.260 | -0.387 | -0.455 | — |
| chr3_42760715_A_G | chr3:42760715 | -0.258 | -0.434 | -0.369 | — |
| chr3_42760605_G_C | chr3:42760605 | 0.256 | 0.242 | 0.250 | — |
| chr3_42760577_A_G | chr3:42760577 | 0.256 | 0.057 | 0.281 | — |
| chr3_42760617_T_C | chr3:42760617 | -0.255 | -0.455 | 0.015 | — |
| chr3_42760633_A_C | chr3:42760633 | 0.255 | 0.296 | 0.421 | — |
| chr3_42760724_C_T | chr3:42760724 | -0.224 | -0.260 | -0.446 | — |
| chr3_42760545_A_G | chr3:42760545 | 0.249 | 0.709 | 0.229 | — |
| chr3_42760683_T_A | chr3:42760683 | 0.249 | 0.208 | 0.223 | — |
| chr3_42760601_T_C | chr3:42760601 | 0.248 | 0.234 | 0.421 | — |
| chr3_42760630_T_C | chr3:42760630 | 0.247 | 0.055 | 0.186 | — |
| chr3_42760673_C_G | chr3:42760673 | 0.247 | 0.288 | 0.256 | — |
| chr3_42760574_G_A | chr3:42760574 | 0.247 | 0.262 | 0.183 | — |
| chr3_42760692_T_G | chr3:42760692 | 0.245 | 0.145 | 0.153 | — |
| chr3_42760697_G_C | chr3:42760697 | 0.245 | 0.184 | 0.205 | — |
| chr3_42760669_A_G | chr3:42760669 | -0.244 | -0.353 | -0.211 | — |
| chr3_42760720_A_G | chr3:42760720 | -0.202 | -0.377 | -0.437 | — |
| chr3_42760636_C_G | chr3:42760636 | 0.243 | 0.569 | 0.403 | — |
| chr3_42760648_G_A | chr3:42760648 | 0.243 | 0.231 | 0.238 | — |
| chr3_42760671_G_C | chr3:42760671 | 0.243 | 0.312 | 0.391 | — |
| chr3_42760567_A_G | chr3:42760567 | 0.239 | 0.099 | 0.232 | — |
| chr3_42760705_A_C | chr3:42760705 | 0.239 | 0.143 | 0.299 | — |
| chr3_42760633_A_T | chr3:42760633 | 0.238 | 0.184 | 0.260 | — |
| chr3_42760670_T_A | chr3:42760670 | -0.238 | -0.473 | -0.333 | — |
| chr3_42760599_G_T | chr3:42760599 | 0.236 | 0.270 | 0.137 | — |
| chr3_42760680_G_A | chr3:42760680 | 0.235 | 0.371 | 0.333 | — |
| chr3_42760699_G_T | chr3:42760699 | 0.235 | 0.068 | 0.125 | — |
| chr3_42760590_C_G | chr3:42760590 | 0.235 | 0.413 | 0.391 | — |
| chr3_42760712_G_T | chr3:42760712 | -0.219 | -0.436 | -0.418 | — |
| chr3_42760575_C_A | chr3:42760575 | 0.234 | 0.062 | 0.107 | — |
| chr3_42760614_G_C | chr3:42760614 | 0.233 | 0.273 | 0.373 | — |
| chr3_42760641_C_A | chr3:42760641 | 0.233 | 0.356 | 0.128 | — |
| chr3_42760570_T_A | chr3:42760570 | 0.233 | 0.034 | 0.287 | — |
| chr3_42760572_G_A | chr3:42760572 | 0.233 | 0.088 | 0.186 | — |
| chr3_42760722_T_A | chr3:42760722 | -0.183 | -0.312 | -0.415 | — |
| chr3_42760602_G_T | chr3:42760602 | 0.231 | 0.288 | 0.330 | 0.0013% |
| chr3_42760698_T_A | chr3:42760698 | 0.231 | 0.081 | 0.113 | — |
| chr3_42760577_A_C | chr3:42760577 | 0.230 | 0.125 | 0.144 | — |
| chr3_42760645_G_T | chr3:42760645 | 0.230 | 0.252 | 0.110 | — |
| chr3_42760673_C_A | chr3:42760673 | 0.230 | 0.156 | 0.214 | — |
| chr3_42760679_A_G | chr3:42760679 | 0.230 | 0.265 | 0.324 | — |
| chr3_42760555_T_C | chr3:42760555 | 0.229 | 0.418 | 0.321 | — |
| chr3_42760602_G_C | chr3:42760602 | 0.227 | 0.281 | 0.156 | — |
| chr3_42760685_G_A | chr3:42760685 | 0.226 | 0.166 | 0.095 | — |
| chr3_42760643_A_G | chr3:42760643 | 0.224 | 0.127 | 0.321 | — |
| chr3_42760669_A_C | chr3:42760669 | -0.224 | -0.319 | -0.223 | — |
| chr3_42760679_A_T | chr3:42760679 | 0.224 | 0.161 | 0.223 | — |
| chr3_42760616_T_C | chr3:42760616 | -0.224 | -0.610 | -0.165 | — |
| chr3_42760679_A_C | chr3:42760679 | 0.223 | 0.216 | 0.315 | — |
| chr3_42760569_A_G | chr3:42760569 | 0.223 | 0.268 | 0.287 | — |
| chr3_42760586_C_T | chr3:42760586 | 0.222 | 0.278 | 0.189 | — |
| chr3_42760683_T_C | chr3:42760683 | 0.221 | 0.075 | 0.159 | — |
| chr3_42760641_C_G | chr3:42760641 | 0.221 | 0.455 | 0.241 | — |
| chr3_42760718_G_C | chr3:42760718 | -0.156 | -0.273 | -0.394 | — |
| chr3_42760719_C_A | chr3:42760719 | -0.221 | -0.249 | -0.373 | — |
| chr3_42760627_C_A | chr3:42760627 | 0.219 | 0.151 | 0.171 | — |
| chr3_42760674_A_G | chr3:42760674 | 0.219 | 0.057 | 0.333 | 0.0020% |
| chr3_42760588_G_A | chr3:42760588 | 0.217 | 0.278 | 0.318 | 0.0046% |
| chr3_42760677_C_A | chr3:42760677 | 0.217 | 0.026 | 0.095 | — |
| chr3_42760718_G_T | chr3:42760718 | -0.179 | -0.247 | -0.385 | — |
| chr3_42760585_C_A | chr3:42760585 | 0.212 | 0.065 | 0.220 | — |
| chr3_42760591_T_C | chr3:42760591 | 0.212 | 0.169 | 0.165 | — |
| chr3_42760642_G_C | chr3:42760642 | 0.212 | 0.545 | 0.263 | — |
| chr3_42760700_A_T | chr3:42760700 | 0.212 | 0.119 | 0.095 | — |
| chr3_42760629_C_G | chr3:42760629 | 0.210 | 0.208 | 0.269 | — |
| chr3_42760696_A_C | chr3:42760696 | 0.210 | 0.088 | 0.275 | — |
| chr3_42760570_T_G | chr3:42760570 | 0.210 | 0.068 | 0.247 | — |
| chr3_42760609_G_C | chr3:42760609 | 0.209 | 0.205 | 0.134 | — |
| chr3_42742821_C_A | chr3:42742821 | 0.083 | 0.081 | 0.373 | — |
| chr3_42760699_G_C | chr3:42760699 | 0.206 | 0.099 | 0.153 | — |
| chr3_42760540_C_T | chr3:42760540 | -0.205 | -0.299 | -0.260 | — |
| chr3_42760653_G_T | chr3:42760653 | 0.204 | 0.075 | 0.061 | — |
| chr3_42760674_A_C | chr3:42760674 | 0.203 | 0.184 | 0.287 | — |
| chr3_42760719_C_G | chr3:42760719 | -0.176 | -0.229 | -0.363 | — |
| chr3_42760643_A_C | chr3:42760643 | 0.203 | 0.026 | 0.253 | — |
| chr3_42760655_G_C | chr3:42760655 | 0.203 | 0.335 | 0.037 | — |
| chr3_42760647_T_C | chr3:42760647 | 0.202 | 0.192 | 0.272 | — |
| chr3_42760539_C_G | chr3:42760539 | -0.201 | -0.314 | -0.238 | — |
| chr3_42760675_C_A | chr3:42760675 | 0.201 | 0.153 | 0.241 | — |
| chr3_42760708_T_A | chr3:42760708 | -0.201 | -0.558 | -0.232 | — |
| chr3_42760628_A_G | chr3:42760628 | 0.200 | 0.021 | 0.302 | — |
| chr3_42760582_A_T | chr3:42760582 | 0.200 | -0.047 | 0.092 | — |
| chr3_42760608_A_T | chr3:42760608 | 0.200 | 0.086 | 0.205 | — |
| chr3_42760584_T_G | chr3:42760584 | 0.198 | -0.005 | 0.330 | — |
| chr3_42760597_A_C | chr3:42760597 | 0.191 | 0.068 | 0.354 | — |
| chr3_42760702_C_G | chr3:42760702 | 0.197 | 0.034 | 0.177 | — |
| chr3_42760674_A_T | chr3:42760674 | 0.195 | 0.088 | 0.211 | — |
| chr3_42760726_A_G | chr3:42760726 | -0.195 | -0.265 | -0.272 | — |
| chr3_42760666_G_A | chr3:42760666 | -0.162 | -0.221 | -0.345 | <0.001% |
| chr3_42760716_T_G | chr3:42760716 | -0.193 | -0.319 | -0.290 | — |
| chr3_42760540_C_A | chr3:42760540 | -0.191 | -0.288 | -0.189 | — |
| chr3_42760538_A_T | chr3:42760538 | -0.191 | -0.299 | -0.238 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.