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KLHL17

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near KLHL17

chr1:860,583..1,065,719, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_904299_G_A	chr1:904299	0.235	0.379	1.000	0.0013%
chr1_912972_G_A	chr1:912972	0.949	0.797	1.000	<0.001%
chr1_904301_G_C	chr1:904301	0.253	0.327	1.000	<0.001%
chr1_904707_A_C	chr1:904707	-1.000	-0.181	-1.000	0.0028%
chr1_904307_G_A	chr1:904307	0.318	0.322	1.000	0.0028%
chr1_869922_C_T	chr1:869922	-1.000	-0.414	-1.000	0.0020%
chr1_904306_G_T	chr1:904306	0.246	0.293	1.000	<0.001%
chr1_912970_C_T	chr1:912970	0.777	0.706	1.000	0.0013%
chr1_913018_G_C	chr1:913018	0.543	0.514	1.000	0.0013%
chr1_921194_C_G	chr1:921194	0.794	0.369	1.000	—
chr1_904778_G_C	chr1:904778	-0.977	-0.068	-1.000	<0.001%
chr1_904694_G_A	chr1:904694	0.905	0.267	0.719	0.0021%
chr1_921199_C_T	chr1:921199	-0.523	-0.292	-1.000	—
chr1_906992_A_G	chr1:906992	0.129	0.313	1.000	0.0013%
chr1_921196_T_G	chr1:921196	0.693	0.427	0.930	—
chr1_921198_C_T	chr1:921198	-0.470	-0.293	-1.000	0.0033%
chr1_921199_C_G	chr1:921199	-0.517	-0.312	-1.000	—
chr1_904732_G_A	chr1:904732	0.811	0.170	0.725	0.0013%
chr1_921198_C_A	chr1:921198	-0.454	-0.270	-1.000	—
chr1_921194_C_A	chr1:921194	0.628	0.298	0.836	—
chr1_913005_T_C	chr1:913005	0.495	0.300	1.000	0.0013%
chr1_921197_C_A	chr1:921197	-0.356	-0.243	-1.000	<0.001%
chr1_921200_T_A	chr1:921200	-0.459	-0.301	-1.000	—
chr1_921197_C_T	chr1:921197	-0.339	-0.214	-1.000	—
chr1_921198_C_G	chr1:921198	-0.431	-0.264	-1.000	—
chr1_870017_C_T	chr1:870017	0.729	0.324	0.869	<0.001%
chr1_921193_T_C	chr1:921193	-0.397	-0.214	-1.000	—
chr1_921199_C_A	chr1:921199	-0.380	-0.241	-0.959	—
chr1_904780_G_A	chr1:904780	-0.672	-0.046	-0.654	0.0026%
chr1_906914_C_T	chr1:906914	-0.276	-0.144	-1.000	0.0013%
chr1_904309_G_C	chr1:904309	0.130	0.138	1.000	<0.001%
chr1_869776_C_G	chr1:869776	0.340	0.161	0.899	<0.001%
chr1_870113_G_A	chr1:870113	0.419	0.631	0.873	<0.001%
chr1_870019_C_A	chr1:870019	0.545	0.299	0.765	<0.001%
chr1_921196_T_C	chr1:921196	-0.281	-0.194	-0.772	—
chr1_869777_C_A	chr1:869777	0.237	0.134	0.837	<0.001%
chr1_921197_C_G	chr1:921197	-0.252	-0.180	-0.743	—
chr1_913039_G_T	chr1:913039	-0.147	-0.214	-0.797	<0.001%
chr1_870069_C_A	chr1:870069	0.296	0.267	0.791	<0.001%
chr1_904721_C_T	chr1:904721	0.391	0.099	0.784	<0.001%
chr1_906982_C_T	chr1:906982	-0.150	-0.043	-0.784	22.9%
chr1_913034_G_A	chr1:913034	-0.143	-0.200	-0.778	<0.001%
chr1_904836_C_T	chr1:904836	0.488	0.083	0.464	0.0013%
chr1_904808_C_T	chr1:904808	0.487	0.046	0.425	0.0013%
chr1_904845_C_A	chr1:904845	0.487	0.061	0.003	<0.001%
chr1_870020_C_G	chr1:870020	0.480	0.225	0.497	0.0026%
chr1_904450_C_A	chr1:904450	0.163	0.096	0.725	<0.001%
chr1_869895_C_A	chr1:869895	-0.439	0.182	-0.490	<0.001%
chr1_869774_C_A	chr1:869774	0.276	0.129	0.686	<0.001%
chr1_904787_C_A	chr1:904787	0.427	0.054	0.539	0.0013%
chr1_904429_C_T	chr1:904429	0.184	0.076	0.673	<0.001%
chr1_869777_C_T	chr1:869777	0.206	0.141	0.667	<0.001%
chr1_906997_T_G	chr1:906997	0.122	0.208	0.667	0.0013%
chr1_912976_A_G	chr1:912976	-0.178	-0.131	-0.654	<0.001%
chr1_921172_G_C	chr1:921172	-0.230	-0.123	-0.573	—
chr1_869958_C_G	chr1:869958	-0.401	-0.018	-0.327	0.0085%
chr1_911378_G_C	chr1:911378	-0.258	-0.067	-0.634	<0.001%
chr1_904695_T_C	chr1:904695	-0.341	-0.076	-0.631	0.167%
chr1_904787_C_G	chr1:904787	0.393	0.012	0.330	<0.001%
chr1_904817_A_T	chr1:904817	-0.389	0.019	-0.163	<0.001%
chr1_912977_C_T	chr1:912977	-0.184	-0.109	-0.601	0.0013%
chr1_921149_G_A	chr1:921149	0.244	0.054	0.601	<0.001%
chr1_904514_G_A	chr1:904514	0.378	0.137	0.176	<0.001%
chr1_904724_C_T	chr1:904724	0.347	0.106	0.588	<0.001%
chr1_906924_A_T	chr1:906924	-0.100	-0.123	-0.588	<0.001%
chr1_869757_C_G	chr1:869757	0.174	0.131	0.575	<0.001%
chr1_904744_G_C	chr1:904744	-0.353	-0.044	-0.359	<0.001%
chr1_906797_T_C	chr1:906797	0.043	0.062	0.556	<0.001%
chr1_921196_T_A	chr1:921196	-0.203	-0.123	-0.497	0.0020%
chr1_919793_G_T	chr1:919793	-0.184	-0.134	-0.549	<0.001%
chr1_921195_C_A	chr1:921195	0.098	-0.004	0.480	—
chr1_869793_C_G	chr1:869793	0.167	0.107	0.529	0.0066%
chr1_870150_A_G	chr1:870150	-0.196	-0.107	-0.529	0.033%
chr1_921195_C_T	chr1:921195	-0.207	-0.121	-0.468	—
chr1_869933_G_A	chr1:869933	-0.328	-0.065	-0.052	<0.001%
chr1_904451_C_G	chr1:904451	0.113	0.063	0.510	0.0020%
chr1_904837_G_C	chr1:904837	0.215	0.071	0.510	0.0026%
chr1_904784_C_T	chr1:904784	-0.320	-0.002	-0.065	<0.001%
chr1_869967_T_C	chr1:869967	0.186	0.216	0.503	<0.001%
chr1_869983_C_A	chr1:869983	0.201	-0.048	0.503	<0.001%
chr1_870051_G_A	chr1:870051	0.181	0.137	0.503	0.0020%
chr1_869855_A_G	chr1:869855	0.315	0.065	0.399	<0.001%
chr1_904743_C_T	chr1:904743	-0.315	-0.062	-0.359	<0.001%
chr1_904700_G_T	chr1:904700	-0.312	-0.016	-0.052	0.150%
chr1_904861_G_C	chr1:904861	0.308	-0.001	0.150	<0.001%
chr1_911333_T_C	chr1:911333	-0.120	-0.003	-0.477	<0.001%
chr1_919799_G_A	chr1:919799	-0.175	-0.136	-0.477	0.0013%
chr1_904810_C_A	chr1:904810	0.298	0.032	0.196	<0.001%
chr1_912945_T_A	chr1:912945	0.110	0.112	0.464	0.0046%
chr1_870057_G_T	chr1:870057	0.033	0.065	0.458	<0.001%
chr1_906954_C_T	chr1:906954	-0.077	-0.097	-0.458	0.0013%
chr1_906969_C_G	chr1:906969	0.051	0.118	0.458	<0.001%
chr1_912877_G_A	chr1:912877	0.064	-0.019	-0.458	0.0020%
chr1_912971_C_T	chr1:912971	-0.129	-0.085	-0.451	0.0013%
chr1_904636_C_T	chr1:904636	0.108	0.014	0.444	0.0022%
chr1_904830_C_T	chr1:904830	-0.277	-0.007	0.222	0.025%
chr1_904737_C_G	chr1:904737	-0.275	-0.025	-0.118	0.0026%
chr1_904703_T_C	chr1:904703	-0.215	-0.038	-0.435	<0.001%
chr1_904801_G_A	chr1:904801	0.152	0.071	0.435	<0.001%
chr1_870013_A_G	chr1:870013	-0.271	-0.169	-0.431	0.041%
chr1_904725_T_C	chr1:904725	-0.157	-0.044	-0.431	<0.001%
chr1_906891_T_A	chr1:906891	-0.088	-0.083	-0.431	0.0013%
chr1_904847_T_C	chr1:904847	0.238	-0.018	-0.418	<0.001%
chr1_904458_C_T	chr1:904458	0.019	0.061	0.412	<0.001%
chr1_904517_G_A	chr1:904517	0.039	0.043	0.412	0.0066%
chr1_904837_G_A	chr1:904837	0.256	0.039	0.412	0.0026%
chr1_921124_C_G	chr1:921124	0.260	0.166	0.261	<0.001%
chr1_870058_G_A	chr1:870058	0.013	0.077	0.405	0.0013%
chr1_870067_C_T	chr1:870067	0.066	0.086	0.399	0.028%
chr1_904425_C_T	chr1:904425	0.059	0.063	0.399	0.0020%
chr1_870002_C_G	chr1:870002	-0.249	0.035	-0.346	<0.001%
chr1_861161_A_T	chr1:861161	0.151	0.227	0.392	<0.001%
chr1_904728_G_T	chr1:904728	0.199	0.063	0.392	0.0033%
chr1_904787_C_T	chr1:904787	0.220	0.041	0.386	0.0013%
chr1_904804_G_C	chr1:904804	-0.242	0.025	-0.098	<0.001%
chr1_921190_A_C	chr1:921190	-0.194	-0.120	-0.281	—
chr1_911415_A_G	chr1:911415	0.240	0.019	0.163	0.013%
chr1_869793_C_T	chr1:869793	0.144	0.083	0.379	<0.001%
chr1_904717_C_T	chr1:904717	0.063	0.067	0.379	<0.001%
chr1_921188_T_A	chr1:921188	-0.140	-0.159	-0.339	—
chr1_870022_A_G	chr1:870022	0.036	-0.091	-0.373	<0.001%
chr1_921191_C_A	chr1:921191	0.189	0.058	0.287	—
chr1_904699_C_A	chr1:904699	-0.231	0.011	0.235	<0.001%
chr1_906870_A_G	chr1:906870	-0.110	-0.062	-0.366	1.69%
chr1_906996_G_A	chr1:906996	-0.088	-0.089	-0.366	<0.001%
chr1_921185_T_C	chr1:921185	0.185	0.091	0.053	—
chr1_904859_C_G	chr1:904859	-0.229	0.011	-0.127	0.0039%
chr1_921190_A_G	chr1:921190	-0.183	-0.152	-0.275	—
chr1_904422_C_T	chr1:904422	0.057	0.048	0.359	0.0013%
chr1_904452_C_A	chr1:904452	0.013	0.068	0.359	<0.001%
chr1_904505_C_G	chr1:904505	0.132	0.018	0.359	<0.001%
chr1_904474_C_T	chr1:904474	-0.225	-0.002	-0.242	0.0013%
chr1_869835_G_C	chr1:869835	-0.064	-0.030	-0.353	0.0020%
chr1_904121_C_G	chr1:904121	-0.049	-0.065	-0.353	<0.001%
chr1_904478_C_T	chr1:904478	0.055	0.020	0.353	0.0014%
chr1_906981_C_T	chr1:906981	-0.005	-0.034	-0.353	<0.001%
chr1_870119_G_A	chr1:870119	0.063	0.246	0.350	0.0020%
chr1_869905_G_T	chr1:869905	0.103	0.038	0.346	0.0013%
chr1_869951_A_G	chr1:869951	-0.219	-0.069	-0.275	0.012%
chr1_912873_C_G	chr1:912873	0.076	-0.042	-0.346	<0.001%
chr1_921194_C_T	chr1:921194	0.175	0.096	0.246	—
chr1_870042_C_A	chr1:870042	0.080	0.021	0.340	<0.001%
chr1_919771_C_G	chr1:919771	0.196	0.133	0.340	0.0013%
chr1_921184_T_A	chr1:921184	0.109	0.062	0.304	—
chr1_904516_G_T	chr1:904516	0.211	0.040	0.170	0.0010%
chr1_904785_C_G	chr1:904785	0.210	0.042	0.150	<0.001%
chr1_870089_G_C	chr1:870089	0.208	0.113	0.157	<0.001%
chr1_870110_G_A	chr1:870110	0.141	-0.002	0.330	0.0013%
chr1_904620_C_T	chr1:904620	0.195	0.020	0.327	0.0021%
chr1_906999_C_T	chr1:906999	-0.047	-0.048	-0.327	<0.001%
chr1_919792_A_T	chr1:919792	-0.112	-0.093	-0.327	0.0053%
chr1_921189_G_C	chr1:921189	-0.094	-0.101	-0.292	—
chr1_904511_A_T	chr1:904511	0.205	0.027	0.275	0.0010%
chr1_869931_G_A	chr1:869931	-0.204	-0.163	0.163	0.0020%
chr1_904715_C_T	chr1:904715	0.028	0.034	0.320	<0.001%
chr1_860995_T_G	chr1:860995	-0.036	-0.075	-0.317	0.0079%
chr1_870187_G_A	chr1:870187	0.075	0.081	0.317	0.0026%
chr1_904804_G_T	chr1:904804	0.058	0.043	0.317	0.020%
chr1_904435_C_T	chr1:904435	0.113	0.058	0.314	<0.001%
chr1_904764_C_T	chr1:904764	0.195	0.052	0.314	<0.001%
chr1_911364_C_T	chr1:911364	-0.072	-0.002	-0.314	0.0013%
chr1_919770_C_T	chr1:919770	0.179	0.121	0.314	<0.001%
chr1_870104_C_T	chr1:870104	0.060	0.051	0.310	<0.001%
chr1_870044_C_T	chr1:870044	0.053	0.046	0.307	<0.001%
chr1_904716_G_A	chr1:904716	0.070	0.048	0.301	<0.001%
chr1_904736_C_T	chr1:904736	0.016	0.038	0.301	<0.001%
chr1_912959_C_T	chr1:912959	-0.046	-0.037	-0.301	0.0020%
chr1_904660_C_G	chr1:904660	-0.098	-0.004	0.294	<0.001%
chr1_870173_C_G	chr1:870173	0.162	0.029	0.291	<0.001%
chr1_869928_G_A	chr1:869928	0.009	0.075	0.288	<0.001%
chr1_870104_C_A	chr1:870104	0.048	0.027	0.288	<0.001%
chr1_904557_C_A	chr1:904557	0.078	0.009	0.288	0.0011%
chr1_904681_T_G	chr1:904681	-0.012	-0.046	-0.288	0.011%
chr1_906982_C_G	chr1:906982	0.040	0.048	-0.288	<0.001%
chr1_921174_C_G	chr1:921174	0.099	0.026	0.257	—
chr1_921181_T_G	chr1:921181	-0.079	-0.055	-0.257	—
chr1_904827_G_T	chr1:904827	-0.180	0.020	0.049	<0.001%
chr1_904722_T_G	chr1:904722	-0.032	-0.062	-0.284	0.0013%
chr1_861111_G_A	chr1:861111	0.087	-0.002	0.281	<0.001%
chr1_870022_A_C	chr1:870022	0.101	-0.038	-0.281	<0.001%
chr1_870055_G_A	chr1:870055	-0.072	0.048	0.281	<0.001%
chr1_906893_A_G	chr1:906893	-0.030	-0.003	-0.281	<0.001%
chr1_921192_C_G	chr1:921192	0.120	0.008	0.251	<0.001%
chr1_921192_C_T	chr1:921192	0.132	0.106	0.251	—
chr1_904672_G_A	chr1:904672	0.066	0.042	0.275	<0.001%
chr1_912825_A_C	chr1:912825	-0.015	0.059	0.275	0.0013%
chr1_912881_G_A	chr1:912881	-0.060	-0.054	-0.275	0.0020%
chr1_921188_T_G	chr1:921188	-0.131	-0.144	-0.246	—
chr1_904728_G_C	chr1:904728	0.171	0.018	0.209	<0.001%
chr1_904822_G_A	chr1:904822	-0.170	0.010	0.088	0.0033%
chr1_904572_A_G	chr1:904572	0.040	-0.007	0.268	0.0031%
chr1_904849_C_T	chr1:904849	0.154	0.026	0.268	0.0099%
chr1_904881_A_G	chr1:904881	0.131	0.075	0.268	0.0013%
chr1_904792_C_A	chr1:904792	-0.168	0.008	-0.098	0.0079%
chr1_869838_C_T	chr1:869838	0.167	0.024	0.170	<0.001%
chr1_861197_C_G	chr1:861197	0.110	0.212	0.261	0.0013%
chr1_904536_G_A	chr1:904536	0.014	0.014	0.261	0.019%
chr1_861150_G_A	chr1:861150	-0.076	-0.062	-0.258	<0.001%
chr1_870021_G_A	chr1:870021	-0.037	0.050	0.255	0.0092%
chr1_904580_T_G	chr1:904580	0.019	0.010	-0.255	0.382%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.