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LAMA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LAMA3
chr18:23,589,452..24,055,065, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr18_23618983_G_T | chr18:23618983 | 1.000 | 1.000 | 1.000 | 0.0013% |
| chr18_23619104_C_G | chr18:23619104 | 0.577 | 0.282 | 1.000 | — |
| chr18_23619190_A_G | chr18:23619190 | 0.239 | 0.380 | 0.966 | — |
| chr18_23618962_G_A | chr18:23618962 | -0.474 | -0.556 | -1.000 | <0.001% |
| chr18_23619146_G_T | chr18:23619146 | 0.493 | 0.453 | 0.713 | — |
| chr18_23619674_C_G | chr18:23619674 | -0.252 | -0.267 | -0.843 | — |
| chr18_23619672_G_C | chr18:23619672 | 0.136 | 0.264 | 0.820 | — |
| chr18_23619145_G_C | chr18:23619145 | 0.443 | 0.232 | 0.624 | — |
| chr18_23619145_G_T | chr18:23619145 | 0.436 | 0.300 | 0.455 | — |
| chr18_23618982_G_A | chr18:23618982 | -0.544 | -0.615 | -0.820 | <0.001% |
| chr18_23619110_G_T | chr18:23619110 | 0.252 | 0.262 | 0.702 | <0.001% |
| chr18_23619655_C_T | chr18:23619655 | -0.215 | -0.134 | -0.674 | — |
| chr18_23619349_C_T | chr18:23619349 | -0.318 | -0.383 | -0.771 | 0.0013% |
| chr18_23619144_G_C | chr18:23619144 | 0.379 | 0.186 | 0.629 | — |
| chr18_23612413_A_G | chr18:23612413 | 0.474 | 0.463 | 0.301 | <0.001% |
| chr18_23619548_G_C | chr18:23619548 | -0.200 | -0.179 | -0.732 | 0.0013% |
| chr18_23619149_T_A | chr18:23619149 | 0.364 | 0.612 | 0.298 | — |
| chr18_23619144_G_A | chr18:23619144 | 0.362 | 0.275 | 0.410 | 0.0013% |
| chr18_23619644_G_A | chr18:23619644 | 0.362 | 0.325 | 0.612 | — |
| chr18_23619665_G_C | chr18:23619665 | 0.069 | 0.108 | 0.618 | — |
| chr18_23619646_C_G | chr18:23619646 | -0.357 | -0.111 | -0.466 | — |
| chr18_23619178_A_G | chr18:23619178 | 0.167 | 0.214 | 0.607 | — |
| chr18_23618985_C_T | chr18:23618985 | -0.335 | -0.427 | -0.696 | 0.0013% |
| chr18_23606103_G_T | chr18:23606103 | -0.438 | -0.275 | -0.232 | 0.0059% |
| chr18_23619365_G_T | chr18:23619365 | -0.206 | -0.198 | -0.693 | 0.0013% |
| chr18_23619115_C_T | chr18:23619115 | -0.189 | -0.222 | -0.590 | — |
| chr18_23619145_G_A | chr18:23619145 | 0.341 | 0.149 | 0.404 | — |
| chr18_23618972_G_T | chr18:23618972 | -0.408 | -0.585 | -0.667 | <0.001% |
| chr18_23618963_T_C | chr18:23618963 | 0.278 | 0.540 | 0.660 | <0.001% |
| chr18_23619191_G_T | chr18:23619191 | -0.152 | -0.247 | -0.567 | — |
| chr18_23612299_A_G | chr18:23612299 | 0.412 | 0.626 | 0.418 | 0.019% |
| chr18_23619112_T_G | chr18:23619112 | 0.177 | 0.194 | 0.562 | — |
| chr18_23619165_A_G | chr18:23619165 | -0.102 | -0.154 | -0.562 | — |
| chr18_23612781_T_A | chr18:23612781 | -0.370 | -0.498 | -0.647 | 0.0039% |
| chr18_23619146_G_C | chr18:23619146 | 0.297 | 0.191 | 0.556 | — |
| chr18_23619109_G_A | chr18:23619109 | 0.152 | 0.181 | 0.551 | — |
| chr18_23619147_T_A | chr18:23619147 | 0.321 | 0.232 | 0.427 | — |
| chr18_23619366_G_A | chr18:23619366 | -0.173 | -0.249 | -0.641 | 0.0020% |
| chr18_23619498_T_C | chr18:23619498 | -0.272 | -0.249 | -0.641 | 0.0013% |
| chr18_23619596_T_C | chr18:23619596 | -0.363 | -0.160 | -0.634 | 0.0013% |
| chr18_23619190_A_T | chr18:23619190 | 0.315 | 0.360 | 0.506 | — |
| chr18_23612355_T_A | chr18:23612355 | 0.386 | 0.425 | 0.386 | <0.001% |
| chr18_23606125_T_G | chr18:23606125 | 0.385 | 0.399 | 0.474 | 0.0020% |
| chr18_23619110_G_C | chr18:23619110 | 0.193 | 0.171 | 0.522 | — |
| chr18_23619574_C_T | chr18:23619574 | -0.076 | -0.089 | -0.601 | <0.001% |
| chr18_23618952_G_A | chr18:23618952 | 0.369 | 0.262 | 0.510 | 0.0013% |
| chr18_23619146_G_A | chr18:23619146 | 0.290 | 0.136 | 0.489 | — |
| chr18_23619148_C_G | chr18:23619148 | 0.290 | 0.224 | 0.337 | <0.001% |
| chr18_23619531_G_A | chr18:23619531 | -0.249 | -0.201 | -0.562 | <0.001% |
| chr18_23619091_G_T | chr18:23619091 | -0.011 | 0.174 | 0.478 | — |
| chr18_23619529_A_G | chr18:23619529 | -0.181 | -0.243 | -0.556 | 0.0013% |
| chr18_23619647_G_C | chr18:23619647 | -0.151 | -0.164 | -0.478 | — |
| chr18_23619674_C_A | chr18:23619674 | -0.103 | -0.131 | -0.472 | — |
| chr18_23606212_A_G | chr18:23606212 | 0.345 | 0.428 | 0.327 | 0.0072% |
| chr18_23619109_G_C | chr18:23619109 | 0.172 | 0.186 | 0.466 | — |
| chr18_23619553_G_A | chr18:23619553 | -0.155 | -0.131 | -0.542 | <0.001% |
| chr18_23619111_A_C | chr18:23619111 | 0.107 | 0.149 | 0.461 | — |
| chr18_23619460_T_C | chr18:23619460 | 0.256 | 0.134 | 0.536 | 0.032% |
| chr18_23619605_C_G | chr18:23619605 | -0.278 | -0.192 | -0.529 | <0.001% |
| chr18_23619649_C_G | chr18:23619649 | -0.264 | -0.073 | -0.264 | — |
| chr18_23619091_G_C | chr18:23619091 | 0.016 | 0.116 | 0.449 | — |
| chr18_23619201_C_G | chr18:23619201 | 0.128 | 0.098 | 0.449 | — |
| chr18_23619087_G_C | chr18:23619087 | 0.139 | 0.131 | 0.444 | <0.001% |
| chr18_23612717_G_A | chr18:23612717 | -0.325 | -0.486 | -0.350 | 0.0072% |
| chr18_23619120_G_T | chr18:23619120 | 0.156 | 0.083 | 0.438 | — |
| chr18_23619114_A_G | chr18:23619114 | 0.061 | 0.184 | 0.433 | — |
| chr18_23619184_T_G | chr18:23619184 | 0.128 | 0.151 | 0.433 | — |
| chr18_23612350_T_C | chr18:23612350 | 0.315 | 0.358 | 0.405 | 0.0098% |
| chr18_23619138_T_G | chr18:23619138 | -0.097 | -0.101 | -0.421 | — |
| chr18_23619572_C_G | chr18:23619572 | 0.280 | 0.169 | 0.490 | <0.001% |
| chr18_23619143_G_T | chr18:23619143 | 0.244 | 0.207 | 0.388 | — |
| chr18_23619120_G_C | chr18:23619120 | 0.115 | 0.093 | 0.416 | — |
| chr18_23619184_T_A | chr18:23619184 | 0.134 | 0.171 | 0.416 | — |
| chr18_23619118_C_G | chr18:23619118 | -0.108 | -0.060 | -0.410 | — |
| chr18_23619660_A_C | chr18:23619660 | -0.030 | 0.055 | 0.410 | — |
| chr18_23618924_T_C | chr18:23618924 | -0.173 | -0.275 | -0.464 | <0.001% |
| chr18_23619207_G_T | chr18:23619207 | -0.187 | -0.196 | -0.399 | — |
| chr18_23619577_A_C | chr18:23619577 | 0.167 | 0.054 | 0.464 | <0.001% |
| chr18_23612283_G_A | chr18:23612283 | -0.208 | -0.185 | -0.458 | <0.001% |
| chr18_23619087_G_T | chr18:23619087 | -0.010 | 0.199 | 0.393 | — |
| chr18_23619124_A_G | chr18:23619124 | 0.107 | 0.131 | 0.393 | <0.001% |
| chr18_23619395_C_T | chr18:23619395 | 0.124 | 0.163 | 0.458 | <0.001% |
| chr18_23619664_G_C | chr18:23619664 | 0.128 | 0.091 | 0.393 | — |
| chr18_23612811_T_A | chr18:23612811 | -0.285 | -0.374 | -0.327 | 0.0046% |
| chr18_23619668_G_C | chr18:23619668 | -0.179 | -0.101 | -0.388 | — |
| chr18_23612812_A_G | chr18:23612812 | 0.280 | 0.617 | 0.395 | 0.0013% |
| chr18_23619125_A_G | chr18:23619125 | 0.026 | 0.149 | 0.376 | — |
| chr18_23619667_C_G | chr18:23619667 | -0.211 | -0.128 | -0.376 | — |
| chr18_23612259_A_G | chr18:23612259 | -0.272 | -0.173 | -0.268 | 0.0053% |
| chr18_23619183_C_G | chr18:23619183 | 0.098 | 0.139 | 0.371 | — |
| chr18_23619240_G_A | chr18:23619240 | -0.140 | -0.141 | -0.431 | 0.0020% |
| chr18_23619488_G_T | chr18:23619488 | -0.144 | -0.109 | -0.431 | 0.0026% |
| chr18_23619651_G_C | chr18:23619651 | 0.048 | 0.113 | 0.371 | — |
| chr18_23619208_G_T | chr18:23619208 | -0.215 | -0.199 | -0.365 | — |
| chr18_23619111_A_T | chr18:23619111 | 0.089 | 0.121 | 0.365 | — |
| chr18_23619417_A_G | chr18:23619417 | 0.153 | 0.198 | 0.418 | <0.001% |
| chr18_23612276_T_C | chr18:23612276 | -0.262 | -0.131 | -0.157 | <0.001% |
| chr18_23619079_C_T | chr18:23619079 | -0.095 | -0.141 | -0.354 | — |
| chr18_23619143_G_C | chr18:23619143 | 0.207 | 0.176 | 0.287 | — |
| chr18_23619038_T_C | chr18:23619038 | -0.256 | -0.246 | -0.268 | <0.001% |
| chr18_23606119_C_G | chr18:23606119 | -0.254 | -0.214 | -0.314 | <0.001% |
| chr18_23612296_C_T | chr18:23612296 | -0.252 | -0.198 | -0.327 | <0.001% |
| chr18_23619661_C_G | chr18:23619661 | -0.126 | -0.121 | -0.343 | — |
| chr18_23612301_C_T | chr18:23612301 | -0.085 | -0.300 | -0.392 | 0.0013% |
| chr18_23619104_C_T | chr18:23619104 | 0.190 | 0.292 | 0.337 | — |
| chr18_23619289_C_T | chr18:23619289 | -0.159 | -0.157 | -0.392 | 3.09% |
| chr18_23619095_C_G | chr18:23619095 | 0.149 | 0.065 | 0.331 | — |
| chr18_23619117_G_T | chr18:23619117 | 0.162 | 0.232 | 0.331 | — |
| chr18_23619142_A_C | chr18:23619142 | 0.162 | 0.164 | 0.331 | — |
| chr18_23619208_G_A | chr18:23619208 | -0.193 | -0.171 | -0.275 | — |
| chr18_23611909_T_C | chr18:23611909 | 0.241 | 0.061 | 0.176 | <0.001% |
| chr18_23619112_T_C | chr18:23619112 | 0.085 | 0.060 | 0.326 | — |
| chr18_23619116_G_C | chr18:23619116 | 0.136 | 0.196 | 0.326 | — |
| chr18_23619271_A_G | chr18:23619271 | 0.179 | 0.208 | 0.379 | 0.131% |
| chr18_23619657_G_A | chr18:23619657 | -0.031 | -0.065 | 0.326 | — |
| chr18_23612270_G_A | chr18:23612270 | -0.148 | -0.144 | -0.373 | 0.0013% |
| chr18_23619163_G_T | chr18:23619163 | -0.082 | -0.134 | -0.315 | — |
| chr18_23619350_A_C | chr18:23619350 | -0.062 | -0.259 | -0.366 | 0.0013% |
| chr18_23619490_C_T | chr18:23619490 | -0.128 | -0.141 | -0.366 | <0.001% |
| chr18_23619666_G_A | chr18:23619666 | 0.080 | 0.035 | 0.315 | — |
| chr18_23612776_G_C | chr18:23612776 | 0.230 | 0.326 | 0.314 | 0.0013% |
| chr18_23618990_T_C | chr18:23618990 | 0.227 | 0.335 | 0.310 | <0.001% |
| chr18_23619162_A_G | chr18:23619162 | 0.002 | -0.073 | -0.309 | — |
| chr18_23619673_G_A | chr18:23619673 | -0.128 | -0.118 | -0.309 | <0.001% |
| chr18_23612772_G_A | chr18:23612772 | -0.224 | -0.367 | -0.275 | 0.0013% |
| chr18_23612802_G_T | chr18:23612802 | -0.167 | -0.272 | -0.353 | 0.0013% |
| chr18_23619107_G_T | chr18:23619107 | -0.108 | -0.106 | -0.303 | — |
| chr18_23619124_A_C | chr18:23619124 | 0.089 | 0.106 | 0.303 | — |
| chr18_23619667_C_T | chr18:23619667 | -0.098 | -0.068 | -0.303 | — |
| chr18_23606176_C_T | chr18:23606176 | -0.221 | -0.294 | -0.320 | 0.0013% |
| chr18_23619093_A_G | chr18:23619093 | 0.048 | 0.101 | 0.298 | — |
| chr18_23619581_C_T | chr18:23619581 | -0.132 | -0.121 | -0.346 | <0.001% |
| chr18_23619074_A_G | chr18:23619074 | -0.146 | -0.232 | -0.292 | — |
| chr18_23619079_C_G | chr18:23619079 | -0.115 | -0.139 | -0.292 | — |
| chr18_23619097_G_T | chr18:23619097 | -0.052 | -0.098 | -0.292 | — |
| chr18_23619143_G_A | chr18:23619143 | 0.159 | 0.275 | 0.292 | <0.001% |
| chr18_23619346_G_C | chr18:23619346 | 0.186 | -0.083 | 0.340 | 0.050% |
| chr18_23619549_G_T | chr18:23619549 | -0.142 | -0.109 | -0.340 | <0.001% |
| chr18_23619572_C_A | chr18:23619572 | 0.200 | 0.150 | 0.340 | 0.0020% |
| chr18_23606109_A_G | chr18:23606109 | 0.115 | 0.240 | 0.337 | 0.0013% |
| chr18_23619074_A_C | chr18:23619074 | -0.133 | -0.196 | -0.287 | — |
| chr18_23619645_G_A | chr18:23619645 | -0.097 | -0.068 | -0.287 | — |
| chr18_23612336_A_G | chr18:23612336 | 0.206 | 0.150 | 0.235 | 0.0013% |
| chr18_23619024_G_C | chr18:23619024 | -0.206 | -0.179 | -0.163 | <0.001% |
| chr18_23619179_G_C | chr18:23619179 | 0.043 | 0.050 | 0.281 | — |
| chr18_23619190_A_C | chr18:23619190 | 0.089 | 0.113 | 0.281 | — |
| chr18_23619200_C_T | chr18:23619200 | -0.125 | -0.141 | -0.281 | <0.001% |
| chr18_23619306_G_A | chr18:23619306 | 0.111 | 0.195 | 0.327 | 0.0033% |
| chr18_23619374_C_A | chr18:23619374 | -0.093 | -0.109 | -0.327 | <0.001% |
| chr18_23619410_C_T | chr18:23619410 | -0.128 | -0.086 | -0.327 | <0.001% |
| chr18_23619643_A_G | chr18:23619643 | -0.164 | -0.058 | -0.208 | — |
| chr18_23618996_A_C | chr18:23618996 | -0.159 | -0.264 | -0.324 | <0.001% |
| chr18_23606146_G_C | chr18:23606146 | -0.203 | -0.252 | -0.131 | <0.001% |
| chr18_23619051_A_T | chr18:23619051 | -0.165 | -0.185 | -0.320 | <0.001% |
| chr18_23619442_T_G | chr18:23619442 | -0.200 | 0.035 | -0.144 | <0.001% |
| chr18_23619106_A_T | chr18:23619106 | -0.125 | -0.144 | -0.270 | 0.0020% |
| chr18_23619147_T_C | chr18:23619147 | 0.131 | 0.111 | 0.270 | 0.0013% |
| chr18_23619177_C_T | chr18:23619177 | -0.044 | -0.065 | -0.270 | — |
| chr18_23619208_G_C | chr18:23619208 | -0.157 | -0.139 | -0.090 | 0.0013% |
| chr18_23619226_G_A | chr18:23619226 | -0.058 | -0.134 | -0.314 | <0.001% |
| chr18_23619279_C_A | chr18:23619279 | -0.115 | -0.105 | -0.314 | <0.001% |
| chr18_23619375_C_T | chr18:23619375 | -0.085 | -0.064 | -0.314 | <0.001% |
| chr18_23619674_C_T | chr18:23619674 | -0.056 | -0.060 | -0.270 | — |
| chr18_23619126_C_T | chr18:23619126 | -0.156 | 0.000 | -0.135 | — |
| chr18_23619207_G_A | chr18:23619207 | -0.156 | -0.174 | -0.258 | — |
| chr18_23612760_A_G | chr18:23612760 | -0.194 | -0.217 | -0.265 | 0.033% |
| chr18_23619074_A_T | chr18:23619074 | -0.121 | -0.171 | -0.264 | — |
| chr18_23619079_C_A | chr18:23619079 | -0.133 | -0.146 | -0.264 | 0.0059% |
| chr18_23619133_C_T | chr18:23619133 | -0.115 | -0.111 | -0.264 | — |
| chr18_23619180_G_C | chr18:23619180 | 0.098 | 0.116 | 0.264 | — |
| chr18_23619206_A_C | chr18:23619206 | 0.092 | 0.101 | 0.258 | <0.001% |
| chr18_23619227_C_T | chr18:23619227 | -0.072 | -0.182 | -0.301 | <0.001% |
| chr18_23619328_C_T | chr18:23619328 | -0.082 | -0.134 | -0.301 | <0.001% |
| chr18_23619652_C_T | chr18:23619652 | -0.067 | -0.020 | -0.258 | 0.0013% |
| chr18_23619654_G_T | chr18:23619654 | -0.082 | -0.030 | -0.258 | — |
| chr18_23619133_C_G | chr18:23619133 | -0.149 | -0.035 | -0.174 | — |
| chr18_23619072_A_T | chr18:23619072 | -0.123 | -0.202 | -0.253 | — |
| chr18_23619088_G_C | chr18:23619088 | 0.023 | 0.055 | 0.253 | — |
| chr18_23619101_A_G | chr18:23619101 | -0.123 | 0.053 | 0.253 | — |
| chr18_23619491_G_T | chr18:23619491 | -0.012 | -0.089 | -0.294 | <0.001% |
| chr18_23619675_C_G | chr18:23619675 | 0.148 | 0.063 | 0.045 | — |
| chr18_23612792_G_T | chr18:23612792 | -0.184 | -0.339 | -0.209 | <0.001% |
| chr18_23619646_C_T | chr18:23619646 | -0.146 | -0.058 | -0.213 | — |
| chr18_23612348_T_A | chr18:23612348 | 0.153 | 0.227 | 0.288 | 0.0020% |
| chr18_23619088_G_T | chr18:23619088 | 0.110 | 0.068 | 0.247 | — |
| chr18_23619098_C_T | chr18:23619098 | -0.059 | -0.088 | -0.247 | — |
| chr18_23619132_A_G | chr18:23619132 | -0.144 | 0.113 | -0.056 | — |
| chr18_23619166_G_T | chr18:23619166 | -0.075 | -0.149 | -0.247 | — |
| chr18_23619203_G_T | chr18:23619203 | -0.056 | -0.081 | -0.247 | — |
| chr18_23619325_A_C | chr18:23619325 | -0.115 | -0.137 | -0.288 | 0.0013% |
| chr18_23619657_G_C | chr18:23619657 | -0.095 | -0.098 | -0.247 | — |
| chr18_23619665_G_A | chr18:23619665 | 0.052 | 0.008 | 0.247 | — |
| chr18_23619085_T_A | chr18:23619085 | -0.003 | -0.108 | -0.242 | — |
| chr18_23619100_G_T | chr18:23619100 | -0.061 | -0.116 | -0.242 | — |
| chr18_23619165_A_C | chr18:23619165 | 0.102 | 0.111 | 0.242 | — |
| chr18_23619329_T_G | chr18:23619329 | 0.177 | 0.051 | 0.026 | <0.001% |
| chr18_23619648_G_A | chr18:23619648 | -0.105 | -0.058 | -0.242 | — |
| chr18_23619665_G_T | chr18:23619665 | 0.020 | 0.008 | 0.242 | — |
| chr18_23612786_T_G | chr18:23612786 | -0.163 | -0.195 | -0.278 | <0.001% |
| chr18_23619083_A_C | chr18:23619083 | -0.084 | -0.144 | -0.236 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.