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LAMA3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LAMA3
chr18:23,589,452..24,055,065, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr18_23618983_G_T | chr18:23618983 | 66,208 | 24,480 | 47,808 | 1.3e-5 |
| chr18_23619104_C_G | chr18:23619104 | 22,528 | 3,584 | 33,920 | — |
| chr18_23619146_G_T | chr18:23619146 | 19,264 | 5,760 | 16,256 | — |
| chr18_23619145_G_C | chr18:23619145 | 17,280 | 2,944 | 14,208 | — |
| chr18_23619145_G_T | chr18:23619145 | 17,024 | 3,808 | 10,368 | — |
| chr18_23618982_G_A | chr18:23618982 | -16,896 | -6,160 | -16,064 | 6.6e-6 |
| chr18_23619144_G_C | chr18:23619144 | 14,784 | 2,368 | 14,336 | — |
| chr18_23618962_G_A | chr18:23618962 | -14,720 | -5,568 | -20,800 | 6.6e-6 |
| chr18_23612413_A_G | chr18:23612413 | 14,720 | 4,640 | 5,888 | 6.6e-6 |
| chr18_23619149_T_A | chr18:23619149 | 14,208 | 7,776 | 6,784 | — |
| chr18_23619144_G_A | chr18:23619144 | 14,144 | 3,488 | 9,344 | 1.3e-5 |
| chr18_23619644_G_A | chr18:23619644 | 14,144 | 4,128 | 13,952 | — |
| chr18_23619646_C_G | chr18:23619646 | -13,952 | -1,408 | -10,624 | — |
| chr18_23606103_G_T | chr18:23606103 | -13,600 | -2,752 | -4,544 | 5.9e-5 |
| chr18_23619145_G_A | chr18:23619145 | 13,312 | 1,888 | 9,216 | — |
| chr18_23612299_A_G | chr18:23612299 | 12,800 | 6,272 | 8,192 | 1.9e-4 |
| chr18_23618972_G_T | chr18:23618972 | -12,672 | -5,856 | -13,056 | 6.6e-6 |
| chr18_23619147_T_A | chr18:23619147 | 12,544 | 2,944 | 9,728 | — |
| chr18_23619190_A_T | chr18:23619190 | 12,288 | 4,576 | 11,520 | — |
| chr18_23612355_T_A | chr18:23612355 | 11,968 | 4,256 | 7,552 | 6.6e-6 |
| chr18_23606125_T_G | chr18:23606125 | 11,936 | 4,000 | 9,280 | 2.0e-5 |
| chr18_23619146_G_C | chr18:23619146 | 11,584 | 2,432 | 12,672 | — |
| chr18_23612781_T_A | chr18:23612781 | -11,488 | -4,992 | -12,672 | 3.9e-5 |
| chr18_23618952_G_A | chr18:23618952 | 11,456 | 2,624 | 9,984 | 1.3e-5 |
| chr18_23619146_G_A | chr18:23619146 | 11,328 | 1,728 | 11,136 | — |
| chr18_23619148_C_G | chr18:23619148 | 11,328 | 2,848 | 7,680 | 6.6e-6 |
| chr18_23619596_T_C | chr18:23619596 | -11,264 | -1,600 | -12,416 | 1.3e-5 |
| chr18_23606212_A_G | chr18:23606212 | 10,720 | 4,288 | 6,400 | 7.2e-5 |
| chr18_23618985_C_T | chr18:23618985 | -10,400 | -4,272 | -13,632 | 1.3e-5 |
| chr18_23619649_C_G | chr18:23619649 | -10,304 | -928 | -6,016 | — |
| chr18_23612717_G_A | chr18:23612717 | -10,080 | -4,864 | -6,848 | 7.2e-5 |
| chr18_23619674_C_G | chr18:23619674 | -9,856 | -3,392 | -19,200 | — |
| chr18_23619110_G_T | chr18:23619110 | 9,856 | 3,328 | 16,000 | 6.6e-6 |
| chr18_23619349_C_T | chr18:23619349 | -9,856 | -3,840 | -15,104 | 1.3e-5 |
| chr18_23612350_T_C | chr18:23612350 | 9,792 | 3,584 | 7,936 | 9.8e-5 |
| chr18_23619143_G_T | chr18:23619143 | 9,536 | 2,624 | 8,832 | — |
| chr18_23619190_A_G | chr18:23619190 | 9,344 | 4,832 | 22,016 | — |
| chr18_23612811_T_A | chr18:23612811 | -8,832 | -3,744 | -6,400 | 4.6e-5 |
| chr18_23619572_C_G | chr18:23619572 | 8,704 | 1,696 | 9,600 | 6.6e-6 |
| chr18_23612812_A_G | chr18:23612812 | 8,704 | 6,176 | 7,744 | 1.3e-5 |
| chr18_23618963_T_C | chr18:23618963 | 8,640 | 5,408 | 12,928 | 6.6e-6 |
| chr18_23619605_C_G | chr18:23619605 | -8,640 | -1,920 | -10,368 | 6.6e-6 |
| chr18_23619498_T_C | chr18:23619498 | -8,448 | -2,496 | -12,544 | 1.3e-5 |
| chr18_23612259_A_G | chr18:23612259 | -8,448 | -1,728 | -5,248 | 5.3e-5 |
| chr18_23619655_C_T | chr18:23619655 | -8,384 | -1,696 | -15,360 | — |
| chr18_23619208_G_T | chr18:23619208 | -8,384 | -2,528 | -8,320 | — |
| chr18_23619667_C_G | chr18:23619667 | -8,256 | -1,632 | -8,576 | — |
| chr18_23612276_T_C | chr18:23612276 | -8,128 | -1,312 | -3,072 | 6.6e-6 |
| chr18_23619143_G_C | chr18:23619143 | 8,064 | 2,240 | 6,528 | — |
| chr18_23619460_T_C | chr18:23619460 | 7,936 | 1,344 | 10,496 | 3.2e-4 |
| chr18_23619038_T_C | chr18:23619038 | -7,936 | -2,464 | -5,248 | 6.6e-6 |
| chr18_23606119_C_G | chr18:23606119 | -7,872 | -2,144 | -6,144 | 6.6e-6 |
| chr18_23612296_C_T | chr18:23612296 | -7,808 | -1,984 | -6,400 | 6.6e-6 |
| chr18_23619531_G_A | chr18:23619531 | -7,744 | -2,016 | -11,008 | 6.6e-6 |
| chr18_23619110_G_C | chr18:23619110 | 7,552 | 2,176 | 11,904 | — |
| chr18_23619208_G_A | chr18:23619208 | -7,552 | -2,176 | -6,272 | — |
| chr18_23611909_T_C | chr18:23611909 | 7,488 | 608 | 3,456 | 6.6e-6 |
| chr18_23619104_C_T | chr18:23619104 | 7,424 | 3,712 | 7,680 | — |
| chr18_23619115_C_T | chr18:23619115 | -7,360 | -2,816 | -13,440 | — |
| chr18_23619207_G_T | chr18:23619207 | -7,296 | -2,496 | -9,088 | — |
| chr18_23612776_G_C | chr18:23612776 | 7,136 | 3,264 | 6,144 | 1.3e-5 |
| chr18_23618990_T_C | chr18:23618990 | 7,040 | 3,360 | 6,080 | 6.6e-6 |
| chr18_23619668_G_C | chr18:23619668 | -6,976 | -1,280 | -8,832 | — |
| chr18_23612772_G_A | chr18:23612772 | -6,944 | -3,680 | -5,376 | 1.3e-5 |
| chr18_23619112_T_G | chr18:23619112 | 6,912 | 2,464 | 12,800 | — |
| chr18_23606176_C_T | chr18:23606176 | -6,848 | -2,944 | -6,272 | 1.3e-5 |
| chr18_23619109_G_C | chr18:23619109 | 6,720 | 2,368 | 10,624 | — |
| chr18_23619178_A_G | chr18:23619178 | 6,528 | 2,720 | 13,824 | — |
| chr18_23612283_G_A | chr18:23612283 | -6,464 | -1,856 | -8,960 | 6.6e-6 |
| chr18_23619365_G_T | chr18:23619365 | -6,400 | -1,984 | -13,568 | 1.3e-5 |
| chr18_23612336_A_G | chr18:23612336 | 6,400 | 1,504 | 4,608 | 1.3e-5 |
| chr18_23619024_G_C | chr18:23619024 | -6,400 | -1,792 | -3,200 | 6.6e-6 |
| chr18_23619643_A_G | chr18:23619643 | -6,400 | -736 | -4,736 | — |
| chr18_23619117_G_T | chr18:23619117 | 6,336 | 2,944 | 7,552 | — |
| chr18_23619142_A_C | chr18:23619142 | 6,336 | 2,080 | 7,552 | — |
| chr18_23606146_G_C | chr18:23606146 | -6,304 | -2,528 | -2,560 | 6.6e-6 |
| chr18_23619548_G_C | chr18:23619548 | -6,208 | -1,792 | -14,336 | 1.3e-5 |
| chr18_23619143_G_A | chr18:23619143 | 6,208 | 3,488 | 6,656 | 6.6e-6 |
| chr18_23619572_C_A | chr18:23619572 | 6,208 | 1,504 | 6,656 | 2.0e-5 |
| chr18_23619442_T_G | chr18:23619442 | -6,208 | 352 | -2,816 | 6.6e-6 |
| chr18_23619208_G_C | chr18:23619208 | -6,144 | -1,760 | -2,048 | 1.3e-5 |
| chr18_23619120_G_T | chr18:23619120 | 6,080 | 1,056 | 9,984 | — |
| chr18_23619126_C_T | chr18:23619126 | -6,080 | 0 | -3,072 | — |
| chr18_23619207_G_A | chr18:23619207 | -6,080 | -2,208 | -5,888 | — |
| chr18_23612760_A_G | chr18:23612760 | -6,016 | -2,176 | -5,184 | 3.3e-4 |
| chr18_23619191_G_T | chr18:23619191 | -5,952 | -3,136 | -12,928 | — |
| chr18_23619109_G_A | chr18:23619109 | 5,952 | 2,304 | 12,544 | — |
| chr18_23619647_G_C | chr18:23619647 | -5,888 | -2,080 | -10,880 | — |
| chr18_23619095_C_G | chr18:23619095 | 5,824 | 832 | 7,552 | — |
| chr18_23619133_C_G | chr18:23619133 | -5,824 | -448 | -3,968 | — |
| chr18_23619346_G_C | chr18:23619346 | 5,760 | -832 | 6,656 | 5.0e-4 |
| chr18_23619675_C_G | chr18:23619675 | 5,760 | 800 | 1,024 | — |
| chr18_23619074_A_G | chr18:23619074 | -5,696 | -2,944 | -6,656 | — |
| chr18_23612792_G_T | chr18:23612792 | -5,696 | -3,392 | -4,096 | 6.6e-6 |
| chr18_23619646_C_T | chr18:23619646 | -5,696 | -736 | -4,864 | — |
| chr18_23619529_A_G | chr18:23619529 | -5,632 | -2,432 | -10,880 | 1.3e-5 |
| chr18_23619132_A_G | chr18:23619132 | -5,632 | 1,440 | -1,280 | — |
| chr18_23619271_A_G | chr18:23619271 | 5,568 | 2,080 | 7,424 | 1.3e-3 |
| chr18_23619329_T_G | chr18:23619329 | 5,504 | 512 | 512 | 6.6e-6 |
| chr18_23619087_G_C | chr18:23619087 | 5,440 | 1,664 | 10,112 | 6.6e-6 |
| chr18_23619366_G_A | chr18:23619366 | -5,376 | -2,496 | -12,544 | 2.0e-5 |
| chr18_23618924_T_C | chr18:23618924 | -5,376 | -2,752 | -9,088 | 6.6e-6 |
| chr18_23619672_G_C | chr18:23619672 | 5,312 | 3,360 | 18,688 | — |
| chr18_23619116_G_C | chr18:23619116 | 5,312 | 2,496 | 7,424 | — |
| chr18_23619184_T_A | chr18:23619184 | 5,248 | 2,176 | 9,472 | — |
| chr18_23619577_A_C | chr18:23619577 | 5,184 | 544 | 9,088 | 6.6e-6 |
| chr18_23612802_G_T | chr18:23612802 | -5,184 | -2,720 | -6,912 | 1.3e-5 |
| chr18_23619074_A_C | chr18:23619074 | -5,184 | -2,496 | -6,528 | — |
| chr18_23619079_C_A | chr18:23619079 | -5,184 | -1,856 | -6,016 | 5.9e-5 |
| chr18_23619051_A_T | chr18:23619051 | -5,120 | -1,856 | -6,272 | 6.6e-6 |
| chr18_23619147_T_C | chr18:23619147 | 5,120 | 1,408 | 6,144 | 1.3e-5 |
| chr18_23612786_T_G | chr18:23612786 | -5,056 | -1,952 | -5,440 | 6.6e-6 |
| chr18_23619201_C_G | chr18:23619201 | 4,992 | 1,248 | 10,240 | — |
| chr18_23619184_T_G | chr18:23619184 | 4,992 | 1,920 | 9,856 | — |
| chr18_23619664_G_C | chr18:23619664 | 4,992 | 1,152 | 8,960 | — |
| chr18_23619673_G_A | chr18:23619673 | -4,992 | -1,504 | -7,040 | 6.6e-6 |
| chr18_23619661_C_G | chr18:23619661 | -4,928 | -1,536 | -7,808 | — |
| chr18_23619289_C_T | chr18:23619289 | -4,928 | -1,568 | -7,680 | 3.1e-2 |
| chr18_23618996_A_C | chr18:23618996 | -4,928 | -2,640 | -6,336 | 6.6e-6 |
| chr18_23619200_C_T | chr18:23619200 | -4,864 | -1,792 | -6,400 | 6.6e-6 |
| chr18_23619106_A_T | chr18:23619106 | -4,864 | -1,824 | -6,144 | 2.0e-5 |
| chr18_23619553_G_A | chr18:23619553 | -4,800 | -1,312 | -10,624 | 6.6e-6 |
| chr18_23619072_A_T | chr18:23619072 | -4,800 | -2,560 | -5,760 | — |
| chr18_23619101_A_G | chr18:23619101 | -4,800 | 672 | 5,760 | — |
| chr18_23619417_A_G | chr18:23619417 | 4,736 | 1,984 | 8,192 | 6.6e-6 |
| chr18_23619074_A_T | chr18:23619074 | -4,736 | -2,176 | -6,016 | — |
| chr18_23612348_T_A | chr18:23612348 | 4,736 | 2,272 | 5,632 | 2.0e-5 |
| chr18_23612270_G_A | chr18:23612270 | -4,608 | -1,440 | -7,296 | 1.3e-5 |
| chr18_23619120_G_C | chr18:23619120 | 4,480 | 1,184 | 9,472 | — |
| chr18_23619488_G_T | chr18:23619488 | -4,480 | -1,088 | -8,448 | 2.6e-5 |
| chr18_23619079_C_G | chr18:23619079 | -4,480 | -1,760 | -6,656 | — |
| chr18_23619133_C_T | chr18:23619133 | -4,480 | -1,408 | -6,016 | — |
| chr18_23619549_G_T | chr18:23619549 | -4,416 | -1,088 | -6,656 | 6.6e-6 |
| chr18_23619240_G_A | chr18:23619240 | -4,352 | -1,408 | -8,448 | 2.0e-5 |
| chr18_23619088_G_T | chr18:23619088 | 4,288 | 864 | 5,632 | — |
| chr18_23619118_C_G | chr18:23619118 | -4,224 | -768 | -9,344 | — |
| chr18_23619107_G_T | chr18:23619107 | -4,224 | -1,344 | -6,912 | — |
| chr18_23619111_A_C | chr18:23619111 | 4,160 | 1,888 | 10,496 | — |
| chr18_23619124_A_G | chr18:23619124 | 4,160 | 1,664 | 8,960 | 6.6e-6 |
| chr18_23619581_C_T | chr18:23619581 | -4,096 | -1,216 | -6,784 | 6.6e-6 |
| chr18_23619648_G_A | chr18:23619648 | -4,096 | -736 | -5,504 | — |
| chr18_23619674_C_A | chr18:23619674 | -4,032 | -1,664 | -10,752 | — |
| chr18_23619165_A_G | chr18:23619165 | -3,968 | -1,952 | -12,800 | — |
| chr18_23619490_C_T | chr18:23619490 | -3,968 | -1,408 | -7,168 | 6.6e-6 |
| chr18_23619410_C_T | chr18:23619410 | -3,968 | -864 | -6,400 | 6.6e-6 |
| chr18_23619165_A_C | chr18:23619165 | 3,968 | 1,408 | 5,504 | — |
| chr18_23619395_C_T | chr18:23619395 | 3,840 | 1,632 | 8,960 | 6.6e-6 |
| chr18_23619183_C_G | chr18:23619183 | 3,840 | 1,760 | 8,448 | — |
| chr18_23619667_C_T | chr18:23619667 | -3,840 | -864 | -6,912 | — |
| chr18_23619180_G_C | chr18:23619180 | 3,840 | 1,472 | 6,016 | — |
| chr18_23619138_T_G | chr18:23619138 | -3,776 | -1,280 | -9,600 | — |
| chr18_23619645_G_A | chr18:23619645 | -3,776 | -864 | -6,528 | — |
| chr18_23619079_C_T | chr18:23619079 | -3,712 | -1,792 | -8,064 | — |
| chr18_23619657_G_C | chr18:23619657 | -3,712 | -1,248 | -5,632 | — |
| chr18_23606109_A_G | chr18:23606109 | 3,584 | 2,400 | 6,592 | 1.3e-5 |
| chr18_23619279_C_A | chr18:23619279 | -3,584 | -1,056 | -6,144 | 6.6e-6 |
| chr18_23619206_A_C | chr18:23619206 | 3,584 | 1,280 | 5,888 | 6.6e-6 |
| chr18_23619325_A_C | chr18:23619325 | -3,584 | -1,376 | -5,632 | 1.3e-5 |
| chr18_23619111_A_T | chr18:23619111 | 3,456 | 1,536 | 8,320 | — |
| chr18_23619124_A_C | chr18:23619124 | 3,456 | 1,344 | 6,912 | — |
| chr18_23619190_A_C | chr18:23619190 | 3,456 | 1,440 | 6,400 | — |
| chr18_23619306_G_A | chr18:23619306 | 3,456 | 1,952 | 6,400 | 3.3e-5 |
| chr18_23619112_T_C | chr18:23619112 | 3,328 | 768 | 7,424 | — |
| chr18_23619083_A_C | chr18:23619083 | -3,264 | -1,824 | -5,376 | — |
| chr18_23619163_G_T | chr18:23619163 | -3,200 | -1,696 | -7,168 | — |
| chr18_23619654_G_T | chr18:23619654 | -3,200 | -384 | -5,888 | — |
| chr18_23619666_G_A | chr18:23619666 | 3,136 | 448 | 7,168 | — |
| chr18_23619166_G_T | chr18:23619166 | -2,944 | -1,888 | -5,632 | — |
| chr18_23619374_C_A | chr18:23619374 | -2,880 | -1,088 | -6,400 | 6.6e-6 |
| chr18_23619665_G_C | chr18:23619665 | 2,688 | 1,376 | 14,080 | — |
| chr18_23612301_C_T | chr18:23612301 | -2,624 | -3,008 | -7,680 | 1.3e-5 |
| chr18_23619375_C_T | chr18:23619375 | -2,624 | -640 | -6,144 | 6.6e-6 |
| chr18_23619652_C_T | chr18:23619652 | -2,624 | -256 | -5,888 | 1.3e-5 |
| chr18_23619328_C_T | chr18:23619328 | -2,560 | -1,344 | -5,888 | 6.6e-6 |
| chr18_23619574_C_T | chr18:23619574 | -2,368 | -896 | -11,776 | 6.6e-6 |
| chr18_23619114_A_G | chr18:23619114 | 2,368 | 2,336 | 9,856 | — |
| chr18_23619100_G_T | chr18:23619100 | -2,368 | -1,472 | -5,504 | — |
| chr18_23619098_C_T | chr18:23619098 | -2,304 | -1,120 | -5,632 | — |
| chr18_23619227_C_T | chr18:23619227 | -2,240 | -1,824 | -5,888 | 6.6e-6 |
| chr18_23619674_C_T | chr18:23619674 | -2,176 | -768 | -6,144 | — |
| chr18_23619203_G_T | chr18:23619203 | -2,176 | -1,024 | -5,632 | — |
| chr18_23619097_G_T | chr18:23619097 | -2,048 | -1,248 | -6,656 | — |
| chr18_23619665_G_A | chr18:23619665 | 2,048 | 96 | 5,632 | — |
| chr18_23619350_A_C | chr18:23619350 | -1,920 | -2,592 | -7,168 | 1.3e-5 |
| chr18_23619651_G_C | chr18:23619651 | 1,856 | 1,440 | 8,448 | — |
| chr18_23619093_A_G | chr18:23619093 | 1,856 | 1,280 | 6,784 | — |
| chr18_23619226_G_A | chr18:23619226 | -1,792 | -1,344 | -6,144 | 6.6e-6 |
| chr18_23619177_C_T | chr18:23619177 | -1,728 | -832 | -6,144 | — |
| chr18_23619179_G_C | chr18:23619179 | 1,664 | 640 | 6,400 | — |
| chr18_23619657_G_A | chr18:23619657 | -1,216 | -832 | 7,424 | — |
| chr18_23619660_A_C | chr18:23619660 | -1,152 | 704 | 9,344 | — |
| chr18_23619125_A_G | chr18:23619125 | 1,024 | 1,888 | 8,576 | — |
| chr18_23619088_G_C | chr18:23619088 | 896 | 704 | 5,760 | — |
| chr18_23619665_G_T | chr18:23619665 | 768 | 96 | 5,504 | — |
| chr18_23619091_G_C | chr18:23619091 | 640 | 1,472 | 10,240 | — |
| chr18_23619091_G_T | chr18:23619091 | -448 | 2,208 | 10,880 | — |
| chr18_23619087_G_T | chr18:23619087 | -384 | 2,528 | 8,960 | — |
| chr18_23619491_G_T | chr18:23619491 | -384 | -896 | -5,760 | 6.6e-6 |
| chr18_23619085_T_A | chr18:23619085 | -128 | -1,376 | -5,504 | — |
| chr18_23619162_A_G | chr18:23619162 | 64 | -928 | -7,040 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.