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LINC01488
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LINC01488
chr11:69,385,560..69,593,543, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_69396745_A_T | chr11:69396745 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396788_C_T | chr11:69396788 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396748_A_T | chr11:69396748 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396768_G_T | chr11:69396768 | 0.958 | 1.000 | 1.000 | — |
| chr11_69396748_A_G | chr11:69396748 | 0.945 | 1.000 | 1.000 | — |
| chr11_69396693_T_G | chr11:69396693 | 0.889 | 0.939 | 1.000 | — |
| chr11_69396749_C_A | chr11:69396749 | 0.867 | 0.967 | 1.000 | — |
| chr11_69396724_A_T | chr11:69396724 | 0.800 | 0.910 | 1.000 | — |
| chr11_69396740_C_A | chr11:69396740 | -0.617 | -0.668 | -1.000 | 0.012% |
| chr11_69396793_C_T | chr11:69396793 | -0.623 | -0.699 | -1.000 | — |
| chr11_69396730_C_T | chr11:69396730 | 0.749 | 0.867 | 1.000 | — |
| chr11_69396740_C_G | chr11:69396740 | -0.601 | -0.650 | -1.000 | — |
| chr11_69396745_A_C | chr11:69396745 | -0.610 | -0.687 | -1.000 | — |
| chr11_69396792_C_G | chr11:69396792 | -0.626 | -0.693 | -1.000 | — |
| chr11_69396749_C_G | chr11:69396749 | 0.662 | 0.732 | 1.000 | — |
| chr11_69396746_C_T | chr11:69396746 | 0.684 | 0.740 | 1.000 | — |
| chr11_69396793_C_G | chr11:69396793 | -0.542 | -0.610 | -1.000 | — |
| chr11_69396800_T_C | chr11:69396800 | 0.636 | 0.720 | 0.988 | — |
| chr11_69396729_C_A | chr11:69396729 | 0.618 | 0.709 | 1.000 | — |
| chr11_69396750_C_G | chr11:69396750 | 0.524 | 0.574 | 1.000 | — |
| chr11_69396784_A_T | chr11:69396784 | -0.473 | -0.563 | -1.000 | — |
| chr11_69396788_C_G | chr11:69396788 | -0.498 | -0.560 | -1.000 | — |
| chr11_69396809_C_A | chr11:69396809 | -0.509 | -0.551 | -1.000 | — |
| chr11_69396656_G_C | chr11:69396656 | 0.399 | 0.522 | 1.000 | — |
| chr11_69396721_C_G | chr11:69396721 | 0.469 | 0.551 | 1.000 | — |
| chr11_69396789_T_G | chr11:69396789 | -0.490 | -0.557 | -1.000 | — |
| chr11_69396714_T_G | chr11:69396714 | 0.533 | 0.596 | 1.000 | — |
| chr11_69396789_T_A | chr11:69396789 | -0.490 | -0.553 | -1.000 | — |
| chr11_69396793_C_A | chr11:69396793 | -0.479 | -0.547 | -1.000 | — |
| chr11_69396712_T_G | chr11:69396712 | 0.569 | 0.602 | 0.918 | — |
| chr11_69396784_A_C | chr11:69396784 | -0.458 | -0.534 | -1.000 | — |
| chr11_69396729_C_T | chr11:69396729 | 0.567 | 0.626 | 0.959 | — |
| chr11_69396784_A_G | chr11:69396784 | -0.462 | -0.543 | -0.994 | — |
| chr11_69396789_T_C | chr11:69396789 | -0.468 | -0.532 | -0.965 | — |
| chr11_69396756_C_G | chr11:69396756 | -0.416 | -0.478 | -0.929 | — |
| chr11_69396726_A_T | chr11:69396726 | 0.495 | 0.549 | 0.924 | — |
| chr11_69396741_A_T | chr11:69396741 | -0.389 | -0.429 | -0.918 | <0.001% |
| chr11_69396685_T_A | chr11:69396685 | 0.507 | 0.548 | 0.812 | — |
| chr11_69396737_G_T | chr11:69396737 | -0.349 | -0.387 | -0.894 | — |
| chr11_69396792_C_A | chr11:69396792 | -0.459 | -0.497 | -0.894 | — |
| chr11_69396760_T_A | chr11:69396760 | -0.442 | -0.487 | -0.888 | — |
| chr11_69396776_G_A | chr11:69396776 | 0.501 | 0.546 | 0.706 | 0.0013% |
| chr11_69396785_C_G | chr11:69396785 | -0.373 | -0.429 | -0.885 | — |
| chr11_69396737_G_C | chr11:69396737 | -0.347 | -0.385 | -0.865 | — |
| chr11_69396741_A_C | chr11:69396741 | -0.375 | -0.409 | -0.865 | — |
| chr11_69396743_T_C | chr11:69396743 | -0.364 | -0.416 | -0.865 | — |
| chr11_69396750_C_A | chr11:69396750 | 0.412 | 0.447 | 0.865 | — |
| chr11_69396790_G_T | chr11:69396790 | -0.367 | -0.435 | -0.865 | — |
| chr11_69396785_C_T | chr11:69396785 | -0.344 | -0.396 | -0.859 | <0.001% |
| chr11_69396751_C_T | chr11:69396751 | 0.380 | 0.426 | 0.835 | — |
| chr11_69396743_T_G | chr11:69396743 | -0.354 | -0.404 | -0.824 | — |
| chr11_69396790_G_C | chr11:69396790 | -0.355 | -0.423 | -0.824 | — |
| chr11_69396804_T_G | chr11:69396804 | 0.461 | 0.484 | 0.771 | — |
| chr11_69396712_T_C | chr11:69396712 | -0.402 | -0.442 | -0.812 | — |
| chr11_69396737_G_A | chr11:69396737 | -0.335 | -0.355 | -0.812 | — |
| chr11_69396729_C_G | chr11:69396729 | 0.387 | 0.447 | 0.806 | — |
| chr11_69396741_A_G | chr11:69396741 | -0.347 | -0.378 | -0.765 | — |
| chr11_69396756_C_A | chr11:69396756 | -0.329 | -0.383 | -0.759 | — |
| chr11_69396766_C_G | chr11:69396766 | -0.306 | -0.371 | -0.741 | — |
| chr11_69396727_A_C | chr11:69396727 | -0.307 | -0.363 | -0.735 | — |
| chr11_69396699_C_A | chr11:69396699 | 0.325 | 0.377 | 0.729 | — |
| chr11_69396727_A_T | chr11:69396727 | 0.329 | 0.363 | 0.729 | — |
| chr11_69396772_A_C | chr11:69396772 | -0.344 | -0.373 | -0.724 | — |
| chr11_69396695_C_G | chr11:69396695 | 0.331 | 0.358 | 0.718 | — |
| chr11_69396739_G_T | chr11:69396739 | 0.361 | 0.378 | 0.706 | — |
| chr11_69396773_C_A | chr11:69396773 | 0.399 | 0.457 | 0.671 | — |
| chr11_69396802_C_A | chr11:69396802 | 0.398 | 0.407 | 0.682 | — |
| chr11_69396732_G_A | chr11:69396732 | -0.317 | -0.335 | -0.700 | — |
| chr11_69396805_A_C | chr11:69396805 | 0.367 | 0.400 | 0.700 | — |
| chr11_69396786_C_T | chr11:69396786 | -0.280 | -0.331 | -0.694 | — |
| chr11_69396782_T_G | chr11:69396782 | -0.282 | -0.352 | -0.685 | — |
| chr11_69396787_T_A | chr11:69396787 | -0.265 | -0.313 | -0.682 | — |
| chr11_69396703_C_G | chr11:69396703 | 0.317 | 0.352 | 0.676 | — |
| chr11_69396790_G_A | chr11:69396790 | -0.280 | -0.330 | -0.676 | — |
| chr11_69396782_T_A | chr11:69396782 | -0.276 | -0.343 | -0.674 | — |
| chr11_69396740_C_T | chr11:69396740 | -0.309 | -0.338 | -0.659 | — |
| chr11_69396796_G_C | chr11:69396796 | -0.334 | -0.354 | -0.659 | — |
| chr11_69396724_A_C | chr11:69396724 | 0.362 | 0.418 | 0.629 | — |
| chr11_69396786_C_A | chr11:69396786 | -0.274 | -0.326 | -0.635 | — |
| chr11_69396787_T_C | chr11:69396787 | -0.255 | -0.310 | -0.635 | — |
| chr11_69396801_G_A | chr11:69396801 | -0.255 | -0.272 | -0.629 | — |
| chr11_69396750_C_T | chr11:69396750 | 0.295 | 0.322 | 0.612 | — |
| chr11_69396756_C_T | chr11:69396756 | -0.276 | -0.315 | -0.606 | — |
| chr11_69396766_C_A | chr11:69396766 | -0.230 | -0.273 | -0.600 | — |
| chr11_69396685_T_G | chr11:69396685 | 0.304 | 0.326 | 0.588 | — |
| chr11_69396732_G_T | chr11:69396732 | -0.276 | -0.289 | -0.588 | — |
| chr11_69396744_G_T | chr11:69396744 | -0.283 | -0.335 | -0.576 | — |
| chr11_69396752_T_A | chr11:69396752 | -0.241 | -0.274 | -0.576 | — |
| chr11_69396769_G_A | chr11:69396769 | 0.326 | 0.411 | 0.518 | — |
| chr11_69396728_C_A | chr11:69396728 | -0.295 | -0.315 | -0.565 | — |
| chr11_69396734_C_G | chr11:69396734 | -0.245 | -0.286 | -0.565 | — |
| chr11_69396786_C_G | chr11:69396786 | -0.268 | -0.320 | -0.565 | — |
| chr11_69396783_G_T | chr11:69396783 | -0.219 | -0.275 | -0.562 | 0.0072% |
| chr11_69396728_C_G | chr11:69396728 | -0.311 | -0.339 | -0.559 | — |
| chr11_69396739_G_A | chr11:69396739 | -0.216 | -0.256 | -0.559 | — |
| chr11_69396714_T_A | chr11:69396714 | 0.275 | 0.294 | 0.553 | — |
| chr11_69396748_A_C | chr11:69396748 | 0.313 | 0.386 | 0.500 | — |
| chr11_69396779_T_C | chr11:69396779 | 0.215 | 0.236 | 0.553 | — |
| chr11_69396787_T_G | chr11:69396787 | -0.247 | -0.293 | -0.553 | — |
| chr11_69396738_G_C | chr11:69396738 | -0.233 | -0.273 | -0.547 | — |
| chr11_69396689_T_A | chr11:69396689 | 0.294 | 0.358 | 0.541 | — |
| chr11_69396738_G_A | chr11:69396738 | -0.206 | -0.237 | -0.541 | — |
| chr11_69396656_G_T | chr11:69396656 | 0.194 | 0.221 | 0.535 | — |
| chr11_69396732_G_C | chr11:69396732 | -0.230 | -0.256 | -0.535 | — |
| chr11_69396783_G_C | chr11:69396783 | -0.216 | -0.269 | -0.532 | — |
| chr11_69396701_T_G | chr11:69396701 | 0.230 | 0.254 | 0.524 | — |
| chr11_69396743_T_A | chr11:69396743 | -0.215 | -0.235 | -0.524 | — |
| chr11_69396795_G_T | chr11:69396795 | -0.218 | -0.242 | -0.524 | — |
| chr11_69396645_A_G | chr11:69396645 | 0.294 | 0.274 | 0.376 | — |
| chr11_69396780_G_C | chr11:69396780 | -0.246 | -0.245 | -0.518 | — |
| chr11_69396734_C_A | chr11:69396734 | -0.214 | -0.240 | -0.512 | — |
| chr11_69396744_G_C | chr11:69396744 | -0.269 | -0.319 | -0.506 | — |
| chr11_69396807_T_C | chr11:69396807 | 0.230 | 0.245 | 0.506 | — |
| chr11_69396742_A_G | chr11:69396742 | -0.212 | -0.246 | -0.494 | <0.001% |
| chr11_69396721_C_T | chr11:69396721 | -0.193 | -0.213 | -0.488 | — |
| chr11_69396724_A_G | chr11:69396724 | -0.263 | -0.288 | -0.482 | — |
| chr11_69396792_C_T | chr11:69396792 | -0.245 | -0.261 | -0.482 | — |
| chr11_69396802_C_G | chr11:69396802 | 0.245 | 0.253 | 0.476 | — |
| chr11_69396742_A_C | chr11:69396742 | -0.193 | -0.227 | -0.471 | — |
| chr11_69396739_G_C | chr11:69396739 | -0.171 | -0.202 | -0.465 | — |
| chr11_69396734_C_T | chr11:69396734 | -0.192 | -0.212 | -0.459 | — |
| chr11_69396753_T_A | chr11:69396753 | -0.153 | -0.181 | -0.453 | — |
| chr11_69396795_G_C | chr11:69396795 | -0.201 | -0.225 | -0.453 | — |
| chr11_69396796_G_A | chr11:69396796 | -0.213 | -0.234 | -0.453 | — |
| chr11_69396736_A_T | chr11:69396736 | -0.194 | -0.214 | -0.447 | — |
| chr11_69396742_A_T | chr11:69396742 | -0.165 | -0.193 | -0.441 | — |
| chr11_69396757_T_C | chr11:69396757 | 0.238 | 0.280 | 0.441 | — |
| chr11_69396738_G_T | chr11:69396738 | -0.162 | -0.181 | -0.435 | — |
| chr11_69396764_A_C | chr11:69396764 | 0.215 | 0.232 | 0.429 | — |
| chr11_69396801_G_T | chr11:69396801 | 0.240 | 0.255 | 0.365 | — |
| chr11_69387921_A_G | chr11:69387921 | 0.085 | 0.179 | 0.421 | — |
| chr11_69396769_G_T | chr11:69396769 | 0.234 | 0.297 | 0.353 | <0.001% |
| chr11_69396708_C_A | chr11:69396708 | -0.186 | -0.199 | -0.412 | — |
| chr11_69396783_G_A | chr11:69396783 | -0.155 | -0.199 | -0.412 | — |
| chr11_69396795_G_A | chr11:69396795 | -0.166 | -0.187 | -0.412 | — |
| chr11_69396764_A_T | chr11:69396764 | -0.182 | -0.202 | -0.400 | — |
| chr11_69396645_A_C | chr11:69396645 | 0.126 | 0.133 | 0.388 | — |
| chr11_69396709_T_A | chr11:69396709 | -0.172 | -0.189 | -0.388 | — |
| chr11_69396774_A_G | chr11:69396774 | 0.143 | 0.162 | 0.388 | — |
| chr11_69396673_C_A | chr11:69396673 | -0.145 | -0.162 | -0.382 | — |
| chr11_69396681_G_C | chr11:69396681 | -0.194 | -0.220 | -0.376 | — |
| chr11_69396701_T_A | chr11:69396701 | 0.176 | 0.192 | 0.376 | — |
| chr11_69396735_C_T | chr11:69396735 | -0.173 | -0.180 | -0.376 | — |
| chr11_69396749_C_T | chr11:69396749 | 0.197 | 0.223 | 0.371 | — |
| chr11_69396661_G_T | chr11:69396661 | 0.139 | 0.169 | 0.365 | — |
| chr11_69396681_G_T | chr11:69396681 | -0.193 | -0.197 | -0.365 | — |
| chr11_69396688_G_A | chr11:69396688 | -0.138 | -0.164 | -0.365 | — |
| chr11_69396698_C_T | chr11:69396698 | 0.178 | 0.203 | 0.365 | — |
| chr11_69396717_T_A | chr11:69396717 | 0.194 | 0.226 | 0.359 | — |
| chr11_69396733_C_T | chr11:69396733 | -0.147 | -0.160 | -0.359 | — |
| chr11_69396775_C_T | chr11:69396775 | 0.160 | 0.180 | 0.359 | 0.0020% |
| chr11_69396701_T_C | chr11:69396701 | 0.156 | 0.180 | 0.353 | — |
| chr11_69396768_G_A | chr11:69396768 | -0.148 | -0.156 | -0.353 | — |
| chr11_69396782_T_C | chr11:69396782 | -0.171 | -0.204 | -0.347 | — |
| chr11_69396769_G_C | chr11:69396769 | 0.195 | 0.242 | 0.294 | — |
| chr11_69396697_G_T | chr11:69396697 | -0.151 | -0.179 | -0.341 | — |
| chr11_69396717_T_G | chr11:69396717 | 0.158 | 0.187 | 0.341 | — |
| chr11_69396754_G_A | chr11:69396754 | -0.143 | -0.175 | -0.341 | — |
| chr11_69396765_G_A | chr11:69396765 | 0.173 | 0.193 | 0.341 | — |
| chr11_69396745_A_G | chr11:69396745 | -0.192 | -0.214 | -0.329 | — |
| chr11_69396772_A_T | chr11:69396772 | -0.156 | -0.151 | -0.335 | — |
| chr11_69396809_C_T | chr11:69396809 | -0.163 | -0.176 | -0.335 | <0.001% |
| chr11_69396699_C_G | chr11:69396699 | 0.137 | 0.155 | 0.318 | — |
| chr11_69396746_C_A | chr11:69396746 | 0.150 | 0.156 | 0.312 | — |
| chr11_69396755_G_T | chr11:69396755 | -0.111 | -0.135 | -0.312 | 0.014% |
| chr11_69396770_G_C | chr11:69396770 | 0.143 | 0.171 | 0.312 | — |
| chr11_69396780_G_A | chr11:69396780 | 0.176 | 0.184 | 0.259 | — |
| chr11_69396804_T_C | chr11:69396804 | 0.156 | 0.169 | 0.312 | — |
| chr11_69396688_G_C | chr11:69396688 | -0.129 | -0.145 | -0.306 | — |
| chr11_69396699_C_T | chr11:69396699 | 0.143 | 0.155 | 0.306 | — |
| chr11_69396726_A_G | chr11:69396726 | -0.151 | -0.166 | -0.306 | — |
| chr11_69396767_T_G | chr11:69396767 | -0.122 | -0.138 | -0.306 | — |
| chr11_69396776_G_C | chr11:69396776 | -0.152 | -0.171 | -0.306 | — |
| chr11_69396663_C_A | chr11:69396663 | -0.103 | -0.123 | -0.300 | — |
| chr11_69396744_G_A | chr11:69396744 | -0.135 | -0.188 | -0.300 | — |
| chr11_69396751_C_G | chr11:69396751 | 0.132 | 0.142 | 0.300 | — |
| chr11_69396718_G_A | chr11:69396718 | -0.111 | -0.137 | -0.288 | — |
| chr11_69396705_C_T | chr11:69396705 | -0.134 | -0.147 | -0.282 | — |
| chr11_69396725_G_C | chr11:69396725 | 0.153 | 0.161 | 0.282 | — |
| chr11_69396794_A_G | chr11:69396794 | -0.135 | -0.154 | -0.276 | — |
| chr11_69396700_A_G | chr11:69396700 | 0.152 | 0.171 | 0.271 | <0.001% |
| chr11_69396704_A_T | chr11:69396704 | -0.135 | -0.152 | -0.271 | <0.001% |
| chr11_69396713_T_C | chr11:69396713 | -0.135 | -0.168 | -0.271 | — |
| chr11_69396722_A_T | chr11:69396722 | -0.121 | -0.132 | -0.271 | — |
| chr11_69396781_G_C | chr11:69396781 | 0.130 | 0.154 | 0.271 | 0.0013% |
| chr11_69396797_C_G | chr11:69396797 | -0.116 | -0.128 | -0.271 | — |
| chr11_69396803_C_G | chr11:69396803 | 0.133 | 0.127 | 0.271 | — |
| chr11_69396807_T_G | chr11:69396807 | -0.130 | -0.129 | -0.271 | — |
| chr11_69396642_A_G | chr11:69396642 | -0.152 | -0.100 | -0.212 | 0.0013% |
| chr11_69396684_T_A | chr11:69396684 | 0.150 | 0.119 | 0.171 | — |
| chr11_69396710_G_C | chr11:69396710 | -0.108 | -0.131 | -0.265 | — |
| chr11_69396725_G_A | chr11:69396725 | -0.127 | -0.135 | -0.265 | — |
| chr11_69396722_A_C | chr11:69396722 | -0.124 | -0.141 | -0.259 | — |
| chr11_69396735_C_A | chr11:69396735 | 0.103 | 0.110 | 0.259 | — |
| chr11_69396752_T_G | chr11:69396752 | -0.119 | -0.133 | -0.259 | — |
| chr11_69396770_G_T | chr11:69396770 | 0.129 | 0.174 | 0.259 | — |
| chr11_69396791_C_T | chr11:69396791 | -0.097 | -0.122 | -0.259 | — |
| chr11_69396706_C_A | chr11:69396706 | -0.116 | -0.126 | -0.253 | — |
| chr11_69396652_G_T | chr11:69396652 | 0.050 | 0.028 | 0.247 | — |
| chr11_69396676_T_G | chr11:69396676 | 0.119 | 0.117 | 0.247 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.