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LINC01488
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LINC01488
chr11:69,385,560..69,593,543, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_69396745_A_T | chr11:69396745 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396788_C_T | chr11:69396788 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396748_A_T | chr11:69396748 | 1.000 | 1.000 | 1.000 | — |
| chr11_69396768_G_T | chr11:69396768 | 0.953 | 1.000 | 1.000 | — |
| chr11_69396748_A_G | chr11:69396748 | 0.940 | 1.000 | 1.000 | — |
| chr11_69396693_T_G | chr11:69396693 | 0.885 | 0.932 | 1.000 | — |
| chr11_69396749_C_A | chr11:69396749 | 0.863 | 0.960 | 1.000 | — |
| chr11_69396724_A_T | chr11:69396724 | 0.796 | 0.903 | 1.000 | — |
| chr11_69396740_C_A | chr11:69396740 | -0.614 | -0.662 | -1.000 | 0.012% |
| chr11_69396793_C_T | chr11:69396793 | -0.620 | -0.693 | -1.000 | — |
| chr11_69396730_C_T | chr11:69396730 | 0.745 | 0.860 | 1.000 | — |
| chr11_69396740_C_G | chr11:69396740 | -0.598 | -0.645 | -1.000 | — |
| chr11_69396745_A_C | chr11:69396745 | -0.607 | -0.681 | -1.000 | — |
| chr11_69396792_C_G | chr11:69396792 | -0.623 | -0.688 | -1.000 | — |
| chr11_69396749_C_G | chr11:69396749 | 0.659 | 0.727 | 1.000 | — |
| chr11_69396746_C_T | chr11:69396746 | 0.680 | 0.734 | 1.000 | — |
| chr11_69396793_C_G | chr11:69396793 | -0.540 | -0.606 | -1.000 | — |
| chr11_69396800_T_C | chr11:69396800 | 0.633 | 0.714 | 0.982 | — |
| chr11_69396729_C_A | chr11:69396729 | 0.615 | 0.704 | 1.000 | — |
| chr11_69396750_C_G | chr11:69396750 | 0.522 | 0.569 | 1.000 | — |
| chr11_69396784_A_T | chr11:69396784 | -0.470 | -0.559 | -1.000 | — |
| chr11_69396788_C_G | chr11:69396788 | -0.495 | -0.555 | -1.000 | — |
| chr11_69396809_C_A | chr11:69396809 | -0.507 | -0.547 | -1.000 | — |
| chr11_69396656_G_C | chr11:69396656 | 0.397 | 0.518 | 1.000 | — |
| chr11_69396721_C_G | chr11:69396721 | 0.467 | 0.547 | 1.000 | — |
| chr11_69396789_T_G | chr11:69396789 | -0.488 | -0.553 | -1.000 | — |
| chr11_69396714_T_G | chr11:69396714 | 0.531 | 0.592 | 1.000 | — |
| chr11_69396789_T_A | chr11:69396789 | -0.488 | -0.549 | -1.000 | — |
| chr11_69396793_C_A | chr11:69396793 | -0.477 | -0.543 | -1.000 | — |
| chr11_69396712_T_G | chr11:69396712 | 0.566 | 0.597 | 0.912 | — |
| chr11_69396784_A_C | chr11:69396784 | -0.456 | -0.530 | -0.997 | — |
| chr11_69396729_C_T | chr11:69396729 | 0.564 | 0.621 | 0.953 | — |
| chr11_69396784_A_G | chr11:69396784 | -0.459 | -0.539 | -0.988 | — |
| chr11_69396789_T_C | chr11:69396789 | -0.466 | -0.528 | -0.959 | — |
| chr11_69396756_C_G | chr11:69396756 | -0.414 | -0.475 | -0.924 | — |
| chr11_69396726_A_T | chr11:69396726 | 0.493 | 0.545 | 0.918 | — |
| chr11_69396741_A_T | chr11:69396741 | -0.387 | -0.426 | -0.912 | <0.001% |
| chr11_69396685_T_A | chr11:69396685 | 0.505 | 0.544 | 0.807 | — |
| chr11_69396737_G_T | chr11:69396737 | -0.347 | -0.384 | -0.889 | — |
| chr11_69396792_C_A | chr11:69396792 | -0.457 | -0.494 | -0.889 | — |
| chr11_69396760_T_A | chr11:69396760 | -0.440 | -0.484 | -0.883 | — |
| chr11_69396776_G_A | chr11:69396776 | 0.498 | 0.542 | 0.702 | 0.0013% |
| chr11_69396785_C_G | chr11:69396785 | -0.371 | -0.426 | -0.880 | — |
| chr11_69396737_G_C | chr11:69396737 | -0.345 | -0.382 | -0.860 | — |
| chr11_69396741_A_C | chr11:69396741 | -0.373 | -0.406 | -0.860 | — |
| chr11_69396743_T_C | chr11:69396743 | -0.362 | -0.413 | -0.860 | — |
| chr11_69396750_C_A | chr11:69396750 | 0.410 | 0.443 | 0.860 | — |
| chr11_69396790_G_T | chr11:69396790 | -0.365 | -0.432 | -0.860 | — |
| chr11_69396785_C_T | chr11:69396785 | -0.343 | -0.393 | -0.854 | <0.001% |
| chr11_69396751_C_T | chr11:69396751 | 0.378 | 0.423 | 0.830 | — |
| chr11_69396743_T_G | chr11:69396743 | -0.352 | -0.401 | -0.819 | — |
| chr11_69396790_G_C | chr11:69396790 | -0.353 | -0.419 | -0.819 | — |
| chr11_69396804_T_G | chr11:69396804 | 0.459 | 0.480 | 0.766 | — |
| chr11_69396712_T_C | chr11:69396712 | -0.400 | -0.438 | -0.807 | — |
| chr11_69396737_G_A | chr11:69396737 | -0.334 | -0.353 | -0.807 | — |
| chr11_69396729_C_G | chr11:69396729 | 0.385 | 0.443 | 0.801 | — |
| chr11_69396741_A_G | chr11:69396741 | -0.345 | -0.375 | -0.760 | — |
| chr11_69396756_C_A | chr11:69396756 | -0.328 | -0.380 | -0.754 | — |
| chr11_69396766_C_G | chr11:69396766 | -0.305 | -0.368 | -0.737 | — |
| chr11_69396727_A_C | chr11:69396727 | -0.305 | -0.360 | -0.731 | — |
| chr11_69396699_C_A | chr11:69396699 | 0.324 | 0.374 | 0.725 | — |
| chr11_69396727_A_T | chr11:69396727 | 0.328 | 0.360 | 0.725 | — |
| chr11_69396772_A_C | chr11:69396772 | -0.342 | -0.370 | -0.719 | — |
| chr11_69396695_C_G | chr11:69396695 | 0.329 | 0.355 | 0.713 | — |
| chr11_69396739_G_T | chr11:69396739 | 0.359 | 0.375 | 0.702 | — |
| chr11_69396773_C_A | chr11:69396773 | 0.397 | 0.453 | 0.667 | — |
| chr11_69396802_C_A | chr11:69396802 | 0.396 | 0.404 | 0.678 | — |
| chr11_69396732_G_A | chr11:69396732 | -0.315 | -0.332 | -0.696 | — |
| chr11_69396805_A_C | chr11:69396805 | 0.365 | 0.397 | 0.696 | — |
| chr11_69396786_C_T | chr11:69396786 | -0.278 | -0.329 | -0.690 | — |
| chr11_69396782_T_G | chr11:69396782 | -0.281 | -0.349 | -0.681 | — |
| chr11_69396787_T_A | chr11:69396787 | -0.263 | -0.311 | -0.678 | — |
| chr11_69396703_C_G | chr11:69396703 | 0.315 | 0.349 | 0.673 | — |
| chr11_69396790_G_A | chr11:69396790 | -0.278 | -0.327 | -0.673 | — |
| chr11_69396782_T_A | chr11:69396782 | -0.275 | -0.340 | -0.670 | — |
| chr11_69396740_C_T | chr11:69396740 | -0.307 | -0.335 | -0.655 | — |
| chr11_69396796_G_C | chr11:69396796 | -0.333 | -0.351 | -0.655 | — |
| chr11_69396724_A_C | chr11:69396724 | 0.360 | 0.414 | 0.626 | — |
| chr11_69396786_C_A | chr11:69396786 | -0.272 | -0.324 | -0.632 | — |
| chr11_69396787_T_C | chr11:69396787 | -0.253 | -0.307 | -0.632 | — |
| chr11_69396801_G_A | chr11:69396801 | -0.254 | -0.270 | -0.626 | — |
| chr11_69396750_C_T | chr11:69396750 | 0.294 | 0.320 | 0.608 | — |
| chr11_69396756_C_T | chr11:69396756 | -0.275 | -0.312 | -0.602 | — |
| chr11_69396766_C_A | chr11:69396766 | -0.228 | -0.271 | -0.596 | — |
| chr11_69396685_T_G | chr11:69396685 | 0.302 | 0.324 | 0.585 | — |
| chr11_69396732_G_T | chr11:69396732 | -0.275 | -0.287 | -0.585 | — |
| chr11_69396744_G_T | chr11:69396744 | -0.281 | -0.332 | -0.573 | — |
| chr11_69396752_T_A | chr11:69396752 | -0.240 | -0.272 | -0.573 | — |
| chr11_69396769_G_A | chr11:69396769 | 0.325 | 0.408 | 0.515 | — |
| chr11_69396728_C_A | chr11:69396728 | -0.294 | -0.312 | -0.561 | — |
| chr11_69396734_C_G | chr11:69396734 | -0.244 | -0.283 | -0.561 | — |
| chr11_69396786_C_G | chr11:69396786 | -0.267 | -0.317 | -0.561 | — |
| chr11_69396783_G_T | chr11:69396783 | -0.218 | -0.273 | -0.558 | 0.0072% |
| chr11_69396728_C_G | chr11:69396728 | -0.310 | -0.336 | -0.556 | — |
| chr11_69396739_G_A | chr11:69396739 | -0.215 | -0.254 | -0.556 | — |
| chr11_69396714_T_A | chr11:69396714 | 0.274 | 0.292 | 0.550 | — |
| chr11_69396748_A_C | chr11:69396748 | 0.311 | 0.383 | 0.497 | — |
| chr11_69396779_T_C | chr11:69396779 | 0.214 | 0.234 | 0.550 | — |
| chr11_69396787_T_G | chr11:69396787 | -0.246 | -0.291 | -0.550 | — |
| chr11_69396738_G_C | chr11:69396738 | -0.232 | -0.271 | -0.544 | — |
| chr11_69396689_T_A | chr11:69396689 | 0.292 | 0.355 | 0.538 | — |
| chr11_69396738_G_A | chr11:69396738 | -0.205 | -0.236 | -0.538 | — |
| chr11_69396656_G_T | chr11:69396656 | 0.193 | 0.219 | 0.532 | — |
| chr11_69396732_G_C | chr11:69396732 | -0.228 | -0.254 | -0.532 | — |
| chr11_69396783_G_C | chr11:69396783 | -0.215 | -0.267 | -0.529 | — |
| chr11_69396701_T_G | chr11:69396701 | 0.229 | 0.252 | 0.520 | — |
| chr11_69396743_T_A | chr11:69396743 | -0.214 | -0.233 | -0.520 | — |
| chr11_69396795_G_T | chr11:69396795 | -0.217 | -0.241 | -0.520 | — |
| chr11_69396645_A_G | chr11:69396645 | 0.292 | 0.272 | 0.374 | — |
| chr11_69396780_G_C | chr11:69396780 | -0.245 | -0.243 | -0.515 | — |
| chr11_69396734_C_A | chr11:69396734 | -0.213 | -0.238 | -0.509 | — |
| chr11_69396744_G_C | chr11:69396744 | -0.267 | -0.316 | -0.503 | — |
| chr11_69396807_T_C | chr11:69396807 | 0.229 | 0.243 | 0.503 | — |
| chr11_69396742_A_G | chr11:69396742 | -0.211 | -0.244 | -0.491 | <0.001% |
| chr11_69396721_C_T | chr11:69396721 | -0.192 | -0.212 | -0.485 | — |
| chr11_69396724_A_G | chr11:69396724 | -0.262 | -0.286 | -0.480 | — |
| chr11_69396792_C_T | chr11:69396792 | -0.243 | -0.259 | -0.480 | — |
| chr11_69396802_C_G | chr11:69396802 | 0.243 | 0.251 | 0.474 | — |
| chr11_69396742_A_C | chr11:69396742 | -0.192 | -0.225 | -0.468 | — |
| chr11_69396739_G_C | chr11:69396739 | -0.171 | -0.200 | -0.462 | — |
| chr11_69396734_C_T | chr11:69396734 | -0.191 | -0.210 | -0.456 | — |
| chr11_69396753_T_A | chr11:69396753 | -0.152 | -0.180 | -0.450 | — |
| chr11_69396795_G_C | chr11:69396795 | -0.200 | -0.223 | -0.450 | — |
| chr11_69396796_G_A | chr11:69396796 | -0.212 | -0.232 | -0.450 | — |
| chr11_69396736_A_T | chr11:69396736 | -0.193 | -0.213 | -0.444 | — |
| chr11_69396742_A_T | chr11:69396742 | -0.164 | -0.191 | -0.439 | — |
| chr11_69396757_T_C | chr11:69396757 | 0.237 | 0.278 | 0.439 | — |
| chr11_69396738_G_T | chr11:69396738 | -0.161 | -0.180 | -0.433 | — |
| chr11_69396764_A_C | chr11:69396764 | 0.214 | 0.230 | 0.427 | — |
| chr11_69396801_G_T | chr11:69396801 | 0.238 | 0.253 | 0.363 | — |
| chr11_69387921_A_G | chr11:69387921 | 0.084 | 0.178 | 0.418 | — |
| chr11_69396769_G_T | chr11:69396769 | 0.233 | 0.295 | 0.351 | <0.001% |
| chr11_69396708_C_A | chr11:69396708 | -0.185 | -0.198 | -0.409 | — |
| chr11_69396783_G_A | chr11:69396783 | -0.154 | -0.198 | -0.409 | — |
| chr11_69396795_G_A | chr11:69396795 | -0.165 | -0.185 | -0.409 | — |
| chr11_69396764_A_T | chr11:69396764 | -0.181 | -0.200 | -0.398 | — |
| chr11_69396645_A_C | chr11:69396645 | 0.125 | 0.132 | 0.386 | — |
| chr11_69396709_T_A | chr11:69396709 | -0.171 | -0.188 | -0.386 | — |
| chr11_69396774_A_G | chr11:69396774 | 0.142 | 0.161 | 0.386 | — |
| chr11_69396673_C_A | chr11:69396673 | -0.144 | -0.161 | -0.380 | — |
| chr11_69396681_G_C | chr11:69396681 | -0.193 | -0.218 | -0.374 | — |
| chr11_69396701_T_A | chr11:69396701 | 0.175 | 0.190 | 0.374 | — |
| chr11_69396735_C_T | chr11:69396735 | -0.172 | -0.179 | -0.374 | — |
| chr11_69396749_C_T | chr11:69396749 | 0.196 | 0.222 | 0.368 | — |
| chr11_69396661_G_T | chr11:69396661 | 0.138 | 0.168 | 0.363 | — |
| chr11_69396681_G_T | chr11:69396681 | -0.192 | -0.195 | -0.363 | — |
| chr11_69396688_G_A | chr11:69396688 | -0.137 | -0.162 | -0.363 | — |
| chr11_69396698_C_T | chr11:69396698 | 0.177 | 0.202 | 0.363 | — |
| chr11_69396717_T_A | chr11:69396717 | 0.193 | 0.224 | 0.357 | — |
| chr11_69396733_C_T | chr11:69396733 | -0.147 | -0.159 | -0.357 | — |
| chr11_69396775_C_T | chr11:69396775 | 0.159 | 0.179 | 0.357 | 0.0020% |
| chr11_69396701_T_C | chr11:69396701 | 0.156 | 0.179 | 0.351 | — |
| chr11_69396768_G_A | chr11:69396768 | -0.147 | -0.155 | -0.351 | — |
| chr11_69396782_T_C | chr11:69396782 | -0.171 | -0.203 | -0.345 | — |
| chr11_69396769_G_C | chr11:69396769 | 0.194 | 0.241 | 0.292 | — |
| chr11_69396697_G_T | chr11:69396697 | -0.151 | -0.178 | -0.339 | — |
| chr11_69396717_T_G | chr11:69396717 | 0.157 | 0.185 | 0.339 | — |
| chr11_69396754_G_A | chr11:69396754 | -0.142 | -0.174 | -0.339 | — |
| chr11_69396765_G_A | chr11:69396765 | 0.172 | 0.191 | 0.339 | — |
| chr11_69396745_A_G | chr11:69396745 | -0.191 | -0.213 | -0.327 | — |
| chr11_69396772_A_T | chr11:69396772 | -0.155 | -0.150 | -0.333 | — |
| chr11_69396809_C_T | chr11:69396809 | -0.162 | -0.175 | -0.333 | <0.001% |
| chr11_69396699_C_G | chr11:69396699 | 0.137 | 0.154 | 0.316 | — |
| chr11_69396746_C_A | chr11:69396746 | 0.149 | 0.155 | 0.310 | — |
| chr11_69396755_G_T | chr11:69396755 | -0.110 | -0.134 | -0.310 | 0.014% |
| chr11_69396770_G_C | chr11:69396770 | 0.142 | 0.170 | 0.310 | — |
| chr11_69396780_G_A | chr11:69396780 | 0.175 | 0.183 | 0.257 | — |
| chr11_69396804_T_C | chr11:69396804 | 0.156 | 0.168 | 0.310 | — |
| chr11_69396688_G_C | chr11:69396688 | -0.128 | -0.144 | -0.304 | — |
| chr11_69396699_C_T | chr11:69396699 | 0.142 | 0.154 | 0.304 | — |
| chr11_69396726_A_G | chr11:69396726 | -0.150 | -0.165 | -0.304 | — |
| chr11_69396767_T_G | chr11:69396767 | -0.122 | -0.137 | -0.304 | — |
| chr11_69396776_G_C | chr11:69396776 | -0.151 | -0.170 | -0.304 | — |
| chr11_69396663_C_A | chr11:69396663 | -0.103 | -0.122 | -0.298 | — |
| chr11_69396744_G_A | chr11:69396744 | -0.134 | -0.186 | -0.298 | — |
| chr11_69396751_C_G | chr11:69396751 | 0.132 | 0.141 | 0.298 | — |
| chr11_69396718_G_A | chr11:69396718 | -0.110 | -0.136 | -0.287 | — |
| chr11_69396705_C_T | chr11:69396705 | -0.133 | -0.146 | -0.281 | — |
| chr11_69396725_G_C | chr11:69396725 | 0.152 | 0.160 | 0.281 | — |
| chr11_69396794_A_G | chr11:69396794 | -0.134 | -0.152 | -0.275 | — |
| chr11_69396700_A_G | chr11:69396700 | 0.151 | 0.170 | 0.269 | <0.001% |
| chr11_69396704_A_T | chr11:69396704 | -0.134 | -0.151 | -0.269 | <0.001% |
| chr11_69396713_T_C | chr11:69396713 | -0.134 | -0.166 | -0.269 | — |
| chr11_69396722_A_T | chr11:69396722 | -0.121 | -0.131 | -0.269 | — |
| chr11_69396781_G_C | chr11:69396781 | 0.129 | 0.152 | 0.269 | 0.0013% |
| chr11_69396797_C_G | chr11:69396797 | -0.116 | -0.127 | -0.269 | — |
| chr11_69396803_C_G | chr11:69396803 | 0.132 | 0.126 | 0.269 | — |
| chr11_69396807_T_G | chr11:69396807 | -0.129 | -0.128 | -0.269 | — |
| chr11_69396642_A_G | chr11:69396642 | -0.151 | -0.099 | -0.211 | 0.0013% |
| chr11_69396684_T_A | chr11:69396684 | 0.149 | 0.118 | 0.170 | — |
| chr11_69396710_G_C | chr11:69396710 | -0.108 | -0.130 | -0.263 | — |
| chr11_69396725_G_A | chr11:69396725 | -0.127 | -0.134 | -0.263 | — |
| chr11_69396722_A_C | chr11:69396722 | -0.123 | -0.140 | -0.257 | — |
| chr11_69396735_C_A | chr11:69396735 | 0.103 | 0.110 | 0.257 | — |
| chr11_69396752_T_G | chr11:69396752 | -0.118 | -0.132 | -0.257 | — |
| chr11_69396770_G_T | chr11:69396770 | 0.128 | 0.173 | 0.257 | — |
| chr11_69396791_C_T | chr11:69396791 | -0.097 | -0.121 | -0.257 | — |
| chr11_69396706_C_A | chr11:69396706 | -0.116 | -0.125 | -0.251 | — |
| chr11_69396652_G_T | chr11:69396652 | 0.050 | 0.028 | 0.246 | — |
| chr11_69396676_T_G | chr11:69396676 | 0.118 | 0.116 | 0.246 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.