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LLGL2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LLGL2
chr17:75,425,696..75,675,209, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_75515737_A_G | chr17:75515737 | -0.603 | -0.436 | -1.000 | — |
| chr17_75515740_T_G | chr17:75515740 | -0.718 | -0.547 | -1.000 | — |
| chr17_75468581_T_G | chr17:75468581 | 1.000 | 1.000 | 1.000 | — |
| chr17_75468575_A_T | chr17:75468575 | 0.811 | 0.768 | 1.000 | — |
| chr17_75515748_G_C | chr17:75515748 | 0.321 | 0.268 | 0.775 | — |
| chr17_75515750_C_G | chr17:75515750 | -0.305 | -0.248 | -0.742 | — |
| chr17_75515746_G_T | chr17:75515746 | 0.115 | 0.251 | 0.719 | 0.222% |
| chr17_75515745_T_G | chr17:75515745 | -0.266 | -0.215 | -0.697 | — |
| chr17_75513637_C_T | chr17:75513637 | 0.125 | 0.128 | 0.680 | — |
| chr17_75515747_G_C | chr17:75515747 | 0.216 | 0.200 | 0.652 | — |
| chr17_75515749_G_C | chr17:75515749 | 0.282 | 0.185 | 0.629 | — |
| chr17_75515735_A_G | chr17:75515735 | -0.233 | -0.171 | -0.607 | — |
| chr17_75515760_A_T | chr17:75515760 | 0.351 | 0.291 | 0.270 | — |
| chr17_75515741_G_C | chr17:75515741 | 0.348 | 0.256 | 0.315 | — |
| chr17_75515746_G_C | chr17:75515746 | 0.233 | 0.219 | 0.596 | — |
| chr17_75468598_G_A | chr17:75468598 | -0.339 | -0.229 | -0.466 | — |
| chr17_75468641_G_A | chr17:75468641 | 0.087 | 0.141 | 0.567 | <0.001% |
| chr17_75513652_A_C | chr17:75513652 | -0.121 | -0.189 | -0.562 | — |
| chr17_75515754_G_C | chr17:75515754 | -0.328 | -0.139 | -0.112 | — |
| chr17_75515748_G_A | chr17:75515748 | 0.230 | 0.174 | 0.539 | 0.0020% |
| chr17_75468610_G_A | chr17:75468610 | -0.287 | -0.203 | -0.517 | — |
| chr17_75515744_C_G | chr17:75515744 | -0.302 | -0.186 | -0.416 | — |
| chr17_75468598_G_C | chr17:75468598 | -0.293 | -0.190 | -0.388 | — |
| chr17_75515740_T_A | chr17:75515740 | -0.292 | -0.222 | -0.270 | — |
| chr17_75515754_G_T | chr17:75515754 | -0.289 | -0.130 | -0.169 | — |
| chr17_75513642_C_G | chr17:75513642 | 0.028 | 0.058 | 0.483 | — |
| chr17_75468707_C_G | chr17:75468707 | 0.246 | 0.215 | 0.478 | — |
| chr17_75515760_A_C | chr17:75515760 | 0.279 | 0.179 | 0.247 | — |
| chr17_75468577_T_C | chr17:75468577 | 0.275 | 0.275 | 0.393 | <0.001% |
| chr17_75515746_G_A | chr17:75515746 | 0.164 | 0.159 | 0.461 | — |
| chr17_75515747_G_T | chr17:75515747 | 0.128 | 0.183 | 0.461 | — |
| chr17_75515748_G_T | chr17:75515748 | 0.174 | 0.166 | 0.461 | — |
| chr17_75468601_A_C | chr17:75468601 | -0.262 | -0.214 | -0.348 | — |
| chr17_75468709_C_T | chr17:75468709 | -0.262 | -0.264 | -0.421 | 0.0013% |
| chr17_75513643_C_G | chr17:75513643 | 0.023 | 0.039 | 0.444 | — |
| chr17_75515736_G_A | chr17:75515736 | 0.256 | 0.212 | 0.270 | <0.001% |
| chr17_75515737_A_T | chr17:75515737 | -0.256 | -0.160 | -0.348 | — |
| chr17_75513642_C_A | chr17:75513642 | 0.023 | 0.064 | 0.433 | <0.001% |
| chr17_75513643_C_T | chr17:75513643 | 0.018 | 0.050 | 0.433 | — |
| chr17_75515754_G_A | chr17:75515754 | -0.252 | -0.122 | -0.146 | — |
| chr17_75513641_C_G | chr17:75513641 | 0.021 | 0.034 | 0.427 | — |
| chr17_75513642_C_T | chr17:75513642 | 0.018 | 0.069 | 0.427 | — |
| chr17_75515747_G_A | chr17:75515747 | 0.128 | 0.127 | 0.427 | — |
| chr17_75515749_G_A | chr17:75515749 | 0.249 | 0.142 | 0.360 | <0.001% |
| chr17_75515756_A_T | chr17:75515756 | -0.249 | -0.112 | -0.101 | — |
| chr17_75513641_C_T | chr17:75513641 | 0.020 | 0.063 | 0.421 | — |
| chr17_75515744_C_T | chr17:75515744 | -0.243 | -0.123 | -0.213 | — |
| chr17_75515761_G_T | chr17:75515761 | -0.243 | -0.120 | -0.101 | — |
| chr17_75468593_G_T | chr17:75468593 | 0.236 | 0.174 | 0.258 | — |
| chr17_75515742_A_G | chr17:75515742 | -0.233 | -0.198 | -0.360 | — |
| chr17_75515761_G_A | chr17:75515761 | -0.233 | -0.108 | -0.180 | — |
| chr17_75513611_T_C | chr17:75513611 | -0.040 | -0.060 | -0.388 | — |
| chr17_75513643_C_A | chr17:75513643 | 0.021 | 0.037 | 0.388 | — |
| chr17_75515757_C_A | chr17:75515757 | -0.226 | -0.064 | -0.112 | — |
| chr17_75468597_G_C | chr17:75468597 | -0.223 | -0.146 | -0.213 | — |
| chr17_75513640_C_G | chr17:75513640 | 0.031 | 0.049 | 0.382 | — |
| chr17_75513641_C_A | chr17:75513641 | 0.021 | 0.045 | 0.382 | — |
| chr17_75515735_A_C | chr17:75515735 | -0.013 | 0.016 | 0.382 | — |
| chr17_75513647_C_G | chr17:75513647 | 0.046 | 0.049 | 0.376 | — |
| chr17_75515737_A_C | chr17:75515737 | -0.220 | -0.137 | -0.191 | — |
| chr17_75515753_T_G | chr17:75515753 | -0.220 | -0.118 | -0.146 | — |
| chr17_75515757_C_G | chr17:75515757 | -0.220 | -0.073 | -0.079 | — |
| chr17_75513637_C_G | chr17:75513637 | 0.016 | 0.042 | 0.371 | — |
| chr17_75513638_C_G | chr17:75513638 | 0.003 | 0.042 | 0.371 | — |
| chr17_75513646_C_G | chr17:75513646 | 0.038 | 0.043 | 0.371 | — |
| chr17_75468578_G_T | chr17:75468578 | -0.190 | -0.154 | -0.365 | — |
| chr17_75515742_A_T | chr17:75515742 | -0.213 | -0.139 | -0.090 | — |
| chr17_75515757_C_T | chr17:75515757 | -0.213 | -0.082 | -0.022 | — |
| chr17_75513644_C_G | chr17:75513644 | 0.026 | 0.040 | 0.360 | — |
| chr17_75468585_A_T | chr17:75468585 | -0.170 | -0.183 | -0.354 | — |
| chr17_75468598_G_T | chr17:75468598 | -0.207 | -0.137 | -0.270 | — |
| chr17_75468601_A_T | chr17:75468601 | -0.205 | -0.178 | -0.253 | — |
| chr17_75515755_G_C | chr17:75515755 | -0.203 | -0.050 | 0.011 | — |
| chr17_75515740_T_C | chr17:75515740 | -0.200 | -0.178 | -0.101 | — |
| chr17_75515764_C_G | chr17:75515764 | -0.200 | -0.067 | 0.022 | — |
| chr17_75468582_G_A | chr17:75468582 | -0.143 | -0.150 | -0.337 | <0.001% |
| chr17_75468582_G_C | chr17:75468582 | -0.169 | -0.170 | -0.337 | 0.0039% |
| chr17_75468633_C_T | chr17:75468633 | 0.197 | 0.176 | 0.292 | 0.0033% |
| chr17_75515755_G_T | chr17:75515755 | -0.197 | -0.060 | -0.022 | — |
| chr17_75468597_G_T | chr17:75468597 | -0.195 | -0.128 | -0.124 | — |
| chr17_75468600_C_A | chr17:75468600 | -0.195 | -0.131 | -0.230 | — |
| chr17_75513637_C_A | chr17:75513637 | 0.039 | 0.060 | 0.331 | — |
| chr17_75513640_C_T | chr17:75513640 | 0.013 | 0.055 | 0.331 | — |
| chr17_75513644_C_T | chr17:75513644 | 0.016 | 0.044 | 0.331 | 0.0026% |
| chr17_75513645_A_C | chr17:75513645 | -0.077 | -0.033 | -0.331 | — |
| chr17_75513646_C_A | chr17:75513646 | 0.036 | 0.047 | 0.326 | — |
| chr17_75515756_A_G | chr17:75515756 | -0.190 | -0.101 | -0.124 | — |
| chr17_75468597_G_A | chr17:75468597 | -0.187 | -0.123 | -0.197 | — |
| chr17_75468677_T_A | chr17:75468677 | -0.154 | -0.123 | -0.320 | — |
| chr17_75515753_T_A | chr17:75515753 | -0.187 | -0.092 | -0.056 | — |
| chr17_75468600_C_G | chr17:75468600 | -0.184 | -0.134 | -0.208 | — |
| chr17_75468608_G_T | chr17:75468608 | -0.157 | -0.123 | -0.315 | — |
| chr17_75513638_C_T | chr17:75513638 | 0.025 | 0.064 | 0.315 | — |
| chr17_75513640_C_A | chr17:75513640 | 0.025 | 0.045 | 0.315 | — |
| chr17_75513638_C_A | chr17:75513638 | 0.064 | 0.062 | 0.309 | — |
| chr17_75513646_C_T | chr17:75513646 | 0.041 | 0.050 | 0.309 | — |
| chr17_75515738_G_C | chr17:75515738 | -0.180 | -0.096 | 0.191 | — |
| chr17_75468578_G_C | chr17:75468578 | -0.179 | -0.126 | -0.303 | — |
| chr17_75468669_A_T | chr17:75468669 | 0.157 | 0.108 | 0.303 | — |
| chr17_75513644_C_A | chr17:75513644 | 0.020 | 0.040 | 0.303 | — |
| chr17_75515736_G_C | chr17:75515736 | -0.016 | -0.011 | 0.303 | <0.001% |
| chr17_75515739_G_A | chr17:75515739 | -0.177 | -0.089 | 0.034 | — |
| chr17_75515759_T_C | chr17:75515759 | -0.177 | -0.078 | 0.000 | — |
| chr17_75468633_C_A | chr17:75468633 | 0.175 | 0.164 | 0.281 | — |
| chr17_75513647_C_A | chr17:75513647 | 0.074 | 0.064 | 0.298 | — |
| chr17_75515764_C_T | chr17:75515764 | -0.174 | -0.076 | -0.124 | — |
| chr17_75515759_T_A | chr17:75515759 | -0.170 | -0.074 | -0.034 | — |
| chr17_75468594_C_G | chr17:75468594 | -0.169 | -0.131 | -0.236 | — |
| chr17_75468592_T_C | chr17:75468592 | -0.151 | -0.135 | -0.287 | — |
| chr17_75513636_C_G | chr17:75513636 | 0.021 | 0.039 | 0.287 | — |
| chr17_75515756_A_C | chr17:75515756 | -0.092 | 0.008 | 0.281 | — |
| chr17_75513647_C_T | chr17:75513647 | 0.054 | 0.048 | 0.275 | — |
| chr17_75513648_C_G | chr17:75513648 | 0.041 | 0.037 | 0.275 | — |
| chr17_75515742_A_C | chr17:75515742 | -0.161 | -0.099 | 0.090 | — |
| chr17_75515759_T_G | chr17:75515759 | -0.161 | -0.091 | 0.000 | <0.001% |
| chr17_75515761_G_C | chr17:75515761 | -0.161 | -0.086 | -0.022 | — |
| chr17_75468583_T_G | chr17:75468583 | -0.159 | -0.144 | -0.247 | — |
| chr17_75515739_G_C | chr17:75515739 | -0.157 | -0.088 | 0.202 | — |
| chr17_75515743_C_T | chr17:75515743 | -0.154 | -0.107 | -0.270 | — |
| chr17_75515762_A_G | chr17:75515762 | 0.013 | 0.029 | 0.270 | — |
| chr17_75513636_C_T | chr17:75513636 | 0.030 | 0.042 | 0.258 | — |
| chr17_75515739_G_T | chr17:75515739 | 0.000 | 0.040 | 0.258 | — |
| chr17_75468586_C_A | chr17:75468586 | -0.092 | -0.116 | -0.253 | — |
| chr17_75468607_A_T | chr17:75468607 | 0.134 | 0.165 | 0.253 | — |
| chr17_75468633_C_G | chr17:75468633 | 0.148 | 0.136 | 0.225 | — |
| chr17_75513648_C_A | chr17:75513648 | 0.034 | 0.039 | 0.253 | 0.0013% |
| chr17_75513649_A_C | chr17:75513649 | -0.033 | -0.052 | -0.253 | <0.001% |
| chr17_75468599_C_T | chr17:75468599 | 0.144 | 0.229 | 0.219 | — |
| chr17_75468613_A_T | chr17:75468613 | -0.144 | -0.136 | -0.236 | — |
| chr17_75468621_T_G | chr17:75468621 | 0.126 | 0.103 | 0.247 | — |
| chr17_75468634_G_T | chr17:75468634 | 0.144 | 0.116 | 0.236 | — |
| chr17_75468599_C_G | chr17:75468599 | -0.143 | -0.068 | -0.124 | — |
| chr17_75468634_G_C | chr17:75468634 | 0.105 | 0.103 | 0.242 | — |
| chr17_75513614_T_C | chr17:75513614 | -0.026 | -0.052 | -0.242 | — |
| chr17_75515771_C_A | chr17:75515771 | -0.141 | -0.040 | -0.124 | — |
| chr17_75468596_A_C | chr17:75468596 | -0.138 | -0.117 | -0.236 | — |
| chr17_75468632_T_G | chr17:75468632 | 0.121 | 0.118 | 0.236 | — |
| chr17_75513532_A_C | chr17:75513532 | 0.026 | -0.023 | -0.236 | — |
| chr17_75513636_C_A | chr17:75513636 | 0.033 | 0.038 | 0.236 | <0.001% |
| chr17_75515749_G_T | chr17:75515749 | 0.066 | 0.055 | 0.236 | — |
| chr17_75515758_T_G | chr17:75515758 | -0.138 | -0.058 | 0.112 | — |
| chr17_75515765_C_A | chr17:75515765 | -0.138 | -0.030 | -0.011 | — |
| chr17_75468596_A_T | chr17:75468596 | -0.136 | -0.102 | -0.185 | — |
| chr17_75468582_G_T | chr17:75468582 | -0.103 | -0.122 | -0.230 | — |
| chr17_75468606_C_A | chr17:75468606 | -0.125 | -0.094 | -0.230 | — |
| chr17_75515762_A_T | chr17:75515762 | -0.134 | -0.037 | 0.022 | — |
| chr17_75468594_C_T | chr17:75468594 | -0.133 | -0.098 | -0.208 | — |
| chr17_75468600_C_T | chr17:75468600 | -0.131 | -0.107 | -0.191 | — |
| chr17_75468635_A_T | chr17:75468635 | 0.131 | 0.101 | 0.219 | — |
| chr17_75513604_T_C | chr17:75513604 | -0.046 | -0.054 | -0.225 | — |
| chr17_75513609_C_A | chr17:75513609 | 0.041 | 0.057 | 0.225 | — |
| chr17_75513609_C_G | chr17:75513609 | 0.032 | 0.042 | 0.225 | — |
| chr17_75515743_C_G | chr17:75515743 | -0.121 | -0.093 | -0.225 | — |
| chr17_75515751_T_A | chr17:75515751 | 0.131 | 0.076 | 0.169 | — |
| chr17_75468594_C_A | chr17:75468594 | -0.130 | -0.073 | -0.197 | — |
| chr17_75468631_T_G | chr17:75468631 | -0.130 | -0.099 | -0.202 | — |
| chr17_75468574_G_A | chr17:75468574 | -0.108 | -0.108 | -0.219 | — |
| chr17_75468579_A_G | chr17:75468579 | -0.128 | -0.093 | -0.180 | — |
| chr17_75468697_G_T | chr17:75468697 | -0.120 | -0.126 | -0.219 | — |
| chr17_75513531_C_A | chr17:75513531 | 0.008 | -0.019 | -0.219 | — |
| chr17_75515764_C_A | chr17:75515764 | -0.128 | -0.071 | -0.022 | — |
| chr17_75468575_A_G | chr17:75468575 | 0.126 | 0.108 | 0.180 | — |
| chr17_75468595_A_G | chr17:75468595 | -0.126 | -0.102 | -0.124 | — |
| chr17_75468613_A_C | chr17:75468613 | -0.126 | -0.091 | -0.056 | — |
| chr17_75468632_T_A | chr17:75468632 | 0.097 | 0.101 | 0.213 | — |
| chr17_75513609_C_T | chr17:75513609 | 0.033 | 0.048 | 0.213 | — |
| chr17_75515738_G_A | chr17:75515738 | -0.125 | -0.059 | 0.169 | 0.0013% |
| chr17_75468584_C_T | chr17:75468584 | -0.087 | -0.111 | -0.208 | — |
| chr17_75468588_G_C | chr17:75468588 | -0.115 | -0.096 | -0.208 | — |
| chr17_75468706_C_T | chr17:75468706 | 0.097 | 0.106 | 0.208 | — |
| chr17_75515738_G_T | chr17:75515738 | -0.121 | -0.086 | 0.157 | — |
| chr17_75515755_G_A | chr17:75515755 | -0.121 | 0.026 | 0.011 | — |
| chr17_75468621_T_C | chr17:75468621 | -0.120 | -0.086 | -0.118 | — |
| chr17_75468584_C_A | chr17:75468584 | -0.089 | -0.110 | -0.202 | — |
| chr17_75468588_G_T | chr17:75468588 | -0.098 | -0.093 | -0.202 | — |
| chr17_75513532_A_T | chr17:75513532 | 0.018 | -0.008 | -0.202 | — |
| chr17_75513610_C_T | chr17:75513610 | 0.031 | 0.031 | 0.202 | — |
| chr17_75515736_G_T | chr17:75515736 | 0.030 | 0.039 | 0.202 | — |
| chr17_75515763_C_G | chr17:75515763 | -0.118 | -0.063 | -0.045 | — |
| chr17_75468634_G_A | chr17:75468634 | 0.116 | 0.078 | 0.152 | — |
| chr17_75468635_A_G | chr17:75468635 | 0.116 | 0.093 | 0.118 | — |
| chr17_75468586_C_T | chr17:75468586 | -0.074 | -0.108 | -0.197 | — |
| chr17_75468593_G_C | chr17:75468593 | 0.115 | 0.058 | 0.112 | — |
| chr17_75513531_C_G | chr17:75513531 | 0.016 | -0.014 | -0.197 | — |
| chr17_75515735_A_T | chr17:75515735 | -0.115 | -0.050 | 0.124 | — |
| chr17_75515770_G_A | chr17:75515770 | -0.115 | -0.068 | -0.146 | — |
| chr17_75515770_G_C | chr17:75515770 | 0.115 | 0.029 | 0.146 | — |
| chr17_75468604_T_G | chr17:75468604 | 0.111 | 0.096 | 0.191 | — |
| chr17_75468679_G_A | chr17:75468679 | 0.070 | 0.083 | 0.191 | — |
| chr17_75468705_G_A | chr17:75468705 | -0.070 | -0.065 | -0.191 | — |
| chr17_75513610_C_G | chr17:75513610 | 0.044 | 0.043 | 0.191 | — |
| chr17_75513639_A_T | chr17:75513639 | 0.100 | 0.019 | 0.191 | — |
| chr17_75513648_C_T | chr17:75513648 | 0.028 | 0.042 | 0.191 | — |
| chr17_75515751_T_G | chr17:75515751 | 0.111 | 0.054 | 0.169 | — |
| chr17_75515763_C_T | chr17:75515763 | -0.105 | -0.062 | -0.191 | — |
| chr17_75468635_A_C | chr17:75468635 | 0.110 | 0.060 | 0.185 | — |
| chr17_75468585_A_C | chr17:75468585 | -0.098 | -0.101 | -0.185 | — |
| chr17_75468591_T_G | chr17:75468591 | 0.108 | 0.087 | 0.107 | — |
| chr17_75468638_C_A | chr17:75468638 | -0.090 | -0.071 | -0.185 | — |
| chr17_75513529_G_T | chr17:75513529 | 0.030 | -0.011 | -0.185 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.