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LMNTD2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LMNTD2
chr11:454,849..660,738, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_469862_A_T | chr11:469862 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_469915_G_C | chr11:469915 | -1.000 | -0.799 | -1.000 | 0.0053% |
| chr11_469914_G_A | chr11:469914 | -1.000 | -0.808 | -1.000 | <0.001% |
| chr11_469836_C_A | chr11:469836 | -1.000 | -0.869 | -1.000 | <0.001% |
| chr11_506418_T_A | chr11:506418 | -0.266 | -0.610 | -1.000 | 0.020% |
| chr11_506969_C_T | chr11:506969 | 0.553 | 0.843 | 1.000 | 0.0020% |
| chr11_506962_C_T | chr11:506962 | 0.190 | 0.409 | 1.000 | <0.001% |
| chr11_506415_A_G | chr11:506415 | -0.155 | -0.578 | -1.000 | <0.001% |
| chr11_469905_C_A | chr11:469905 | -0.736 | -0.270 | -1.000 | 0.0013% |
| chr11_469825_G_A | chr11:469825 | -0.808 | -0.310 | -0.941 | <0.001% |
| chr11_469828_G_A | chr11:469828 | -0.763 | -0.594 | -1.000 | 0.0033% |
| chr11_506957_C_A | chr11:506957 | 0.416 | 0.486 | 1.000 | 0.0013% |
| chr11_469912_G_C | chr11:469912 | -0.614 | -0.230 | -1.000 | <0.001% |
| chr11_469806_C_T | chr11:469806 | -0.289 | -0.236 | -1.000 | 0.023% |
| chr11_469920_A_G | chr11:469920 | -0.664 | -0.514 | -0.810 | 0.0013% |
| chr11_469794_C_G | chr11:469794 | 0.658 | 0.770 | 0.889 | 0.797% |
| chr11_469841_C_T | chr11:469841 | -0.604 | -0.236 | -0.340 | 0.074% |
| chr11_469944_A_G | chr11:469944 | 0.598 | 0.454 | 0.418 | <0.001% |
| chr11_469825_G_C | chr11:469825 | -0.542 | -0.032 | -0.078 | <0.001% |
| chr11_469836_C_G | chr11:469836 | -0.538 | -0.492 | -0.837 | 0.0020% |
| chr11_506958_C_A | chr11:506958 | 0.223 | 0.240 | 0.850 | <0.001% |
| chr11_470132_G_C | chr11:470132 | 0.054 | 0.152 | 0.830 | <0.001% |
| chr11_506950_C_A | chr11:506950 | 0.190 | 0.265 | 0.810 | 0.0020% |
| chr11_506404_G_A | chr11:506404 | -0.266 | -0.355 | -0.784 | 0.0013% |
| chr11_469936_A_G | chr11:469936 | 0.487 | 0.326 | 0.353 | <0.001% |
| chr11_506397_G_A | chr11:506397 | -0.115 | -0.195 | -0.758 | <0.001% |
| chr11_469896_G_T | chr11:469896 | -0.476 | -0.268 | -0.601 | <0.001% |
| chr11_469882_G_A | chr11:469882 | -0.301 | -0.294 | -0.745 | <0.001% |
| chr11_469890_G_A | chr11:469890 | -0.458 | -0.329 | -0.732 | 0.0020% |
| chr11_506956_C_A | chr11:506956 | 0.247 | 0.272 | 0.732 | <0.001% |
| chr11_506958_C_G | chr11:506958 | 0.408 | 0.195 | 0.719 | <0.001% |
| chr11_469766_C_T | chr11:469766 | 0.452 | 0.741 | 0.183 | <0.001% |
| chr11_506354_C_G | chr11:506354 | 0.447 | 0.272 | 0.405 | <0.001% |
| chr11_469929_A_G | chr11:469929 | 0.445 | 0.233 | 0.314 | 0.0033% |
| chr11_506949_C_T | chr11:506949 | 0.144 | 0.217 | 0.693 | <0.001% |
| chr11_506793_A_C | chr11:506793 | 0.186 | -0.054 | -0.680 | 0.0026% |
| chr11_506896_A_C | chr11:506896 | 0.078 | -0.211 | -0.680 | <0.001% |
| chr11_469896_G_C | chr11:469896 | -0.427 | -0.268 | -0.510 | 0.0013% |
| chr11_506792_C_T | chr11:506792 | 0.227 | -0.026 | -0.654 | <0.001% |
| chr11_506949_C_G | chr11:506949 | 0.243 | 0.243 | 0.627 | 0.0039% |
| chr11_506968_C_G | chr11:506968 | 0.054 | 0.252 | 0.614 | 0.0020% |
| chr11_506976_G_A | chr11:506976 | -0.384 | -0.256 | -0.261 | 0.0060% |
| chr11_469995_A_G | chr11:469995 | 0.346 | 0.308 | 0.601 | 0.0013% |
| chr11_506923_G_A | chr11:506923 | 0.062 | 0.195 | 0.588 | 0.0046% |
| chr11_506962_C_G | chr11:506962 | 0.025 | 0.147 | 0.588 | <0.001% |
| chr11_469911_A_G | chr11:469911 | -0.365 | -0.121 | -0.575 | <0.001% |
| chr11_506906_G_T | chr11:506906 | -0.021 | 0.153 | 0.549 | 0.0020% |
| chr11_506936_C_T | chr11:506936 | 0.120 | 0.153 | 0.549 | <0.001% |
| chr11_506373_G_A | chr11:506373 | -0.089 | -0.185 | -0.510 | <0.001% |
| chr11_469795_C_T | chr11:469795 | -0.320 | -0.179 | -0.353 | 0.0020% |
| chr11_469888_G_A | chr11:469888 | -0.313 | -0.220 | -0.327 | <0.001% |
| chr11_506394_C_T | chr11:506394 | -0.130 | -0.144 | -0.497 | 0.0020% |
| chr11_506797_G_A | chr11:506797 | 0.289 | 0.064 | -0.497 | <0.001% |
| chr11_506877_G_A | chr11:506877 | 0.256 | -0.249 | -0.484 | 0.0033% |
| chr11_506880_G_A | chr11:506880 | -0.095 | -0.230 | -0.458 | 0.851% |
| chr11_469801_C_T | chr11:469801 | -0.243 | -0.198 | -0.444 | <0.001% |
| chr11_507005_G_A | chr11:507005 | -0.268 | -0.142 | 0.098 | <0.001% |
| chr11_506386_T_C | chr11:506386 | -0.144 | -0.204 | -0.418 | 0.0013% |
| chr11_469761_C_T | chr11:469761 | -0.260 | -0.201 | -0.412 | 0.0013% |
| chr11_469802_G_A | chr11:469802 | -0.243 | -0.220 | -0.405 | <0.001% |
| chr11_494828_C_T | chr11:494828 | -0.008 | 0.073 | 0.405 | 0.0039% |
| chr11_506996_C_G | chr11:506996 | -0.058 | -0.062 | -0.405 | <0.001% |
| chr11_472586_C_T | chr11:472586 | 0.124 | 0.236 | 0.392 | <0.001% |
| chr11_494863_C_T | chr11:494863 | 0.008 | 0.091 | 0.392 | 0.0033% |
| chr11_506303_G_T | chr11:506303 | -0.105 | -0.099 | -0.379 | <0.001% |
| chr11_506416_T_C | chr11:506416 | 0.144 | 0.105 | 0.379 | 0.0026% |
| chr11_506936_C_A | chr11:506936 | -0.021 | 0.067 | 0.379 | 0.0013% |
| chr11_469853_G_A | chr11:469853 | -0.235 | -0.070 | -0.052 | <0.001% |
| chr11_506879_C_A | chr11:506879 | 0.029 | -0.565 | -0.366 | <0.001% |
| chr11_506841_T_C | chr11:506841 | 0.227 | -0.147 | -0.131 | 0.018% |
| chr11_469788_C_A | chr11:469788 | -0.161 | -0.195 | -0.353 | 0.0013% |
| chr11_506826_G_C | chr11:506826 | 0.223 | 0.089 | 0.078 | 11.4% |
| chr11_506845_G_A | chr11:506845 | 0.219 | -0.064 | 0.157 | <0.001% |
| chr11_469508_G_A | chr11:469508 | 0.008 | 0.081 | 0.345 | <0.001% |
| chr11_469950_A_G | chr11:469950 | 0.210 | 0.133 | 0.209 | <0.001% |
| chr11_470287_A_C | chr11:470287 | -0.033 | -0.083 | -0.333 | <0.001% |
| chr11_507034_C_T | chr11:507034 | 0.054 | 0.037 | 0.333 | 0.0099% |
| chr11_469889_C_T | chr11:469889 | 0.163 | 0.105 | -0.327 | 0.030% |
| chr11_469945_T_G | chr11:469945 | 0.206 | 0.137 | 0.170 | <0.001% |
| chr11_494811_G_C | chr11:494811 | -0.045 | -0.088 | -0.327 | 0.0013% |
| chr11_506357_G_A | chr11:506357 | 0.179 | 0.313 | 0.327 | <0.001% |
| chr11_469760_A_C | chr11:469760 | -0.202 | -0.195 | -0.124 | <0.001% |
| chr11_494822_C_G | chr11:494822 | -0.016 | 0.030 | 0.320 | 0.0033% |
| chr11_507002_C_T | chr11:507002 | 0.070 | 0.059 | 0.320 | 0.017% |
| chr11_507030_A_G | chr11:507030 | -0.091 | -0.099 | -0.320 | 0.0020% |
| chr11_506430_G_A | chr11:506430 | -0.091 | -0.118 | -0.314 | 0.0013% |
| chr11_506808_A_T | chr11:506808 | -0.052 | -0.300 | 0.314 | <0.001% |
| chr11_469881_C_T | chr11:469881 | -0.124 | -0.246 | -0.301 | <0.001% |
| chr11_470073_C_T | chr11:470073 | 0.190 | 0.145 | 0.170 | 0.0020% |
| chr11_494913_C_T | chr11:494913 | 0.084 | 0.097 | 0.301 | 0.011% |
| chr11_494914_G_A | chr11:494914 | 0.074 | 0.067 | 0.294 | 0.0053% |
| chr11_469493_G_A | chr11:469493 | 0.033 | 0.086 | 0.288 | <0.001% |
| chr11_470179_C_T | chr11:470179 | -0.080 | -0.072 | -0.288 | 0.0039% |
| chr11_506330_G_A | chr11:506330 | 0.126 | 0.278 | 0.288 | <0.001% |
| chr11_506538_C_A | chr11:506538 | 0.076 | 0.035 | 0.288 | <0.001% |
| chr11_506697_G_A | chr11:506697 | -0.047 | -0.096 | -0.288 | 0.0013% |
| chr11_506885_C_G | chr11:506885 | -0.095 | -0.109 | -0.288 | <0.001% |
| chr11_506954_G_A | chr11:506954 | 0.103 | 0.038 | 0.288 | 0.0026% |
| chr11_506955_A_G | chr11:506955 | 0.181 | -0.022 | 0.078 | 0.0013% |
| chr11_495021_C_T | chr11:495021 | 0.000 | -0.069 | -0.281 | <0.001% |
| chr11_507033_C_T | chr11:507033 | -0.033 | 0.016 | 0.281 | 0.0020% |
| chr11_469937_A_T | chr11:469937 | -0.163 | -0.185 | -0.275 | 0.0033% |
| chr11_506377_C_T | chr11:506377 | -0.080 | -0.115 | -0.275 | <0.001% |
| chr11_506747_C_T | chr11:506747 | -0.060 | -0.093 | -0.275 | 0.669% |
| chr11_506902_G_A | chr11:506902 | -0.016 | -0.022 | 0.275 | <0.001% |
| chr11_469621_G_T | chr11:469621 | 0.171 | 0.102 | 0.170 | <0.001% |
| chr11_469647_A_G | chr11:469647 | -0.171 | -0.181 | -0.072 | 0.0013% |
| chr11_469787_G_A | chr11:469787 | 0.171 | 0.240 | 0.222 | 0.0026% |
| chr11_469916_C_T | chr11:469916 | -0.089 | 0.112 | -0.261 | <0.001% |
| chr11_506364_C_T | chr11:506364 | -0.027 | -0.035 | -0.261 | 0.0026% |
| chr11_506493_C_G | chr11:506493 | 0.070 | 0.067 | 0.261 | <0.001% |
| chr11_506580_C_G | chr11:506580 | 0.072 | -0.032 | 0.261 | <0.001% |
| chr11_506580_C_T | chr11:506580 | 0.080 | -0.013 | 0.261 | 0.0013% |
| chr11_506750_G_T | chr11:506750 | 0.016 | -0.054 | -0.261 | <0.001% |
| chr11_506752_G_A | chr11:506752 | 0.103 | -0.096 | -0.261 | <0.001% |
| chr11_506769_A_G | chr11:506769 | 0.091 | 0.064 | 0.261 | <0.001% |
| chr11_506784_T_C | chr11:506784 | 0.082 | 0.064 | 0.261 | <0.001% |
| chr11_506782_G_C | chr11:506782 | 0.163 | 0.134 | 0.235 | <0.001% |
| chr11_494864_G_A | chr11:494864 | -0.077 | -0.032 | -0.255 | <0.001% |
| chr11_495275_G_A | chr11:495275 | -0.034 | 0.006 | -0.255 | 0.024% |
| chr11_470029_A_G | chr11:470029 | 0.097 | 0.080 | 0.248 | <0.001% |
| chr11_506348_C_G | chr11:506348 | 0.144 | 0.080 | 0.248 | 0.0033% |
| chr11_506361_G_A | chr11:506361 | 0.085 | 0.080 | 0.248 | <0.001% |
| chr11_506377_C_G | chr11:506377 | -0.062 | -0.109 | -0.248 | <0.001% |
| chr11_506388_A_C | chr11:506388 | -0.101 | -0.102 | -0.248 | <0.001% |
| chr11_506741_G_A | chr11:506741 | -0.021 | -0.003 | -0.248 | <0.001% |
| chr11_506902_G_T | chr11:506902 | -0.041 | 0.051 | 0.248 | <0.001% |
| chr11_506932_C_T | chr11:506932 | 0.025 | 0.118 | 0.248 | <0.001% |
| chr11_506990_G_A | chr11:506990 | -0.157 | -0.094 | 0.013 | 0.0020% |
| chr11_507053_G_A | chr11:507053 | 0.016 | 0.073 | 0.248 | <0.001% |
| chr11_469648_T_C | chr11:469648 | -0.156 | -0.161 | 0.013 | <0.001% |
| chr11_469992_G_C | chr11:469992 | -0.148 | -0.093 | -0.039 | 0.0013% |
| chr11_494958_T_C | chr11:494958 | 0.029 | 0.088 | 0.235 | 0.0033% |
| chr11_506399_C_G | chr11:506399 | -0.146 | -0.163 | -0.235 | 0.0020% |
| chr11_506553_G_A | chr11:506553 | 0.052 | -0.042 | -0.235 | 0.0020% |
| chr11_506773_C_T | chr11:506773 | 0.004 | 0.067 | -0.235 | <0.001% |
| chr11_506802_C_A | chr11:506802 | -0.039 | -0.022 | -0.235 | <0.001% |
| chr11_506815_C_A | chr11:506815 | -0.111 | -0.326 | 0.235 | <0.001% |
| chr11_506917_T_C | chr11:506917 | 0.049 | -0.029 | -0.235 | <0.001% |
| chr11_506918_G_T | chr11:506918 | -0.016 | 0.029 | 0.235 | <0.001% |
| chr11_507000_C_T | chr11:507000 | 0.037 | 0.097 | 0.235 | <0.001% |
| chr11_470108_G_A | chr11:470108 | -0.054 | -0.024 | -0.229 | 0.0033% |
| chr11_470464_T_C | chr11:470464 | 0.048 | 0.042 | 0.229 | 0.0020% |
| chr11_494814_T_A | chr11:494814 | -0.034 | 0.029 | -0.229 | <0.001% |
| chr11_495070_G_A | chr11:495070 | 0.033 | 0.064 | 0.229 | 0.014% |
| chr11_506765_A_C | chr11:506765 | 0.144 | 0.166 | 0.026 | <0.001% |
| chr11_469525_G_A | chr11:469525 | 0.023 | 0.031 | 0.227 | <0.001% |
| chr11_469750_C_T | chr11:469750 | 0.142 | 0.040 | 0.033 | 0.0013% |
| chr11_470503_G_A | chr11:470503 | 0.032 | 0.046 | 0.225 | 0.0098% |
| chr11_506371_T_C | chr11:506371 | 0.142 | 0.137 | 0.183 | <0.001% |
| chr11_506537_C_T | chr11:506537 | 0.142 | 0.141 | 0.157 | <0.001% |
| chr11_470044_A_G | chr11:470044 | 0.027 | 0.080 | 0.222 | <0.001% |
| chr11_494882_C_T | chr11:494882 | -0.012 | -0.054 | -0.222 | <0.001% |
| chr11_506457_G_A | chr11:506457 | -0.052 | -0.045 | -0.222 | <0.001% |
| chr11_506892_C_T | chr11:506892 | -0.078 | -0.083 | 0.222 | <0.001% |
| chr11_506910_G_T | chr11:506910 | -0.066 | 0.042 | 0.222 | 0.0020% |
| chr11_506911_C_G | chr11:506911 | -0.033 | 0.013 | 0.222 | <0.001% |
| chr11_507049_G_A | chr11:507049 | -0.008 | -0.052 | -0.222 | <0.001% |
| chr11_469747_T_A | chr11:469747 | -0.115 | -0.204 | -0.216 | <0.001% |
| chr11_470117_T_C | chr11:470117 | 0.043 | 0.042 | 0.216 | <0.001% |
| chr11_493080_C_G | chr11:493080 | 0.010 | 0.045 | -0.216 | 0.0013% |
| chr11_507039_T_C | chr11:507039 | 0.016 | -0.045 | -0.216 | <0.001% |
| chr11_469767_C_T | chr11:469767 | -0.124 | -0.134 | -0.209 | <0.001% |
| chr11_506333_G_A | chr11:506333 | -0.027 | -0.061 | -0.209 | 0.0013% |
| chr11_506514_C_G | chr11:506514 | 0.047 | 0.035 | 0.209 | 0.0013% |
| chr11_506536_T_A | chr11:506536 | 0.132 | 0.125 | 0.209 | <0.001% |
| chr11_506582_C_G | chr11:506582 | 0.045 | -0.022 | 0.209 | <0.001% |
| chr11_506673_G_A | chr11:506673 | -0.035 | 0.077 | 0.209 | <0.001% |
| chr11_506733_C_A | chr11:506733 | -0.047 | -0.058 | -0.209 | 0.0013% |
| chr11_506833_G_T | chr11:506833 | 0.115 | 0.121 | 0.209 | <0.001% |
| chr11_506926_C_G | chr11:506926 | -0.029 | 0.022 | 0.209 | <0.001% |
| chr11_469907_T_C | chr11:469907 | -0.122 | -0.396 | -0.078 | <0.001% |
| chr11_470494_G_A | chr11:470494 | 0.041 | 0.104 | 0.203 | 0.0013% |
| chr11_469679_C_A | chr11:469679 | -0.096 | -0.081 | -0.196 | <0.001% |
| chr11_469781_G_T | chr11:469781 | -0.064 | -0.160 | -0.196 | 0.0020% |
| chr11_470103_G_A | chr11:470103 | -0.052 | -0.061 | -0.196 | <0.001% |
| chr11_494797_G_A | chr11:494797 | -0.008 | -0.032 | -0.196 | 0.0013% |
| chr11_506442_G_A | chr11:506442 | 0.016 | -0.099 | -0.196 | 0.0026% |
| chr11_506864_C_G | chr11:506864 | 0.012 | 0.077 | 0.196 | 0.0026% |
| chr11_507013_A_C | chr11:507013 | -0.033 | -0.065 | -0.196 | 0.077% |
| chr11_507045_A_G | chr11:507045 | 0.004 | 0.042 | 0.196 | 0.0020% |
| chr11_469539_G_A | chr11:469539 | 0.089 | 0.090 | 0.191 | <0.001% |
| chr11_469685_G_A | chr11:469685 | -0.045 | -0.018 | -0.190 | 0.0020% |
| chr11_469892_C_T | chr11:469892 | -0.120 | -0.067 | -0.170 | <0.001% |
| chr11_494859_C_T | chr11:494859 | 0.019 | 0.046 | 0.190 | <0.001% |
| chr11_494920_T_G | chr11:494920 | -0.001 | 0.013 | -0.190 | <0.001% |
| chr11_495322_T_C | chr11:495322 | -0.018 | -0.073 | -0.190 | <0.001% |
| chr11_469814_G_A | chr11:469814 | 0.014 | 0.035 | -0.183 | 0.0013% |
| chr11_469976_T_C | chr11:469976 | 0.115 | 0.102 | 0.026 | <0.001% |
| chr11_469980_C_T | chr11:469980 | -0.052 | -0.061 | -0.183 | 0.0013% |
| chr11_506499_C_A | chr11:506499 | 0.016 | -0.077 | -0.183 | <0.001% |
| chr11_506500_G_A | chr11:506500 | 0.002 | -0.045 | -0.183 | <0.001% |
| chr11_506801_A_G | chr11:506801 | 0.115 | 0.080 | 0.078 | <0.001% |
| chr11_506846_G_C | chr11:506846 | -0.045 | -0.083 | -0.183 | <0.001% |
| chr11_506853_C_T | chr11:506853 | 0.087 | 0.093 | 0.183 | 0.028% |
| chr11_506895_C_A | chr11:506895 | 0.115 | -0.010 | -0.183 | <0.001% |
| chr11_506944_G_C | chr11:506944 | 0.095 | 0.115 | 0.183 | <0.001% |
| chr11_507012_A_T | chr11:507012 | 0.095 | 0.077 | 0.183 | <0.001% |
| chr11_507020_C_A | chr11:507020 | 0.103 | 0.083 | 0.183 | 0.045% |
| chr11_470122_G_A | chr11:470122 | -0.014 | -0.022 | -0.176 | 0.0033% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.