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LNCAROD

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near LNCAROD

chr10:52,350,876..52,570,533, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr10_52473108_C_T	chr10:52473108	0.138	0.144	0.113	—
chr10_52473133_G_A	chr10:52473133	0.091	0.108	0.088	—
chr10_52473138_G_T	chr10:52473138	0.085	0.024	0.135	—
chr10_52471349_G_C	chr10:52471349	0.079	0.045	0.149	—
chr10_52473109_C_A	chr10:52473109	0.079	0.064	0.079	<0.001%
chr10_52473140_A_G	chr10:52473140	0.067	0.033	0.028	—
chr10_52398204_C_G	chr10:52398204	0.056	-0.042	0.099	—
chr10_52473141_T_A	chr10:52473141	0.047	0.033	0.037	—
chr10_52473107_A_G	chr10:52473107	0.040	0.057	0.080	—
chr10_52473141_T_G	chr10:52473141	0.044	0.028	0.054	—
chr10_52471273_T_G	chr10:52471273	0.013	-0.005	0.073	—
chr10_52473127_T_G	chr10:52473127	0.041	0.023	-0.006	—
chr10_52471313_A_C	chr10:52471313	0.002	0.010	0.070	—
chr10_52473156_A_C	chr10:52473156	-0.014	-0.005	-0.070	—
chr10_52473106_A_T	chr10:52473106	-0.029	-0.035	-0.069	—
chr10_52473142_C_G	chr10:52473142	0.037	0.028	0.023	—
chr10_52471316_A_C	chr10:52471316	0.016	0.010	0.061	—
chr10_52471291_T_C	chr10:52471291	0.000	-0.003	0.060	—
chr10_52473136_G_A	chr10:52473136	0.018	0.001	0.060	—
chr10_52471300_A_C	chr10:52471300	0.001	0.010	0.057	—
chr10_52471264_C_T	chr10:52471264	-0.007	0.003	-0.056	—
chr10_52471277_G_T	chr10:52471277	-0.002	0.000	-0.054	—
chr10_52473129_A_C	chr10:52473129	0.031	0.020	0.041	—
chr10_52471275_A_G	chr10:52471275	0.007	-0.006	0.053	<0.001%
chr10_52471277_G_A	chr10:52471277	-0.001	0.005	-0.053	3.20%
chr10_52471289_A_C	chr10:52471289	0.004	-0.008	0.053	—
chr10_52473125_G_T	chr10:52473125	0.030	0.006	0.001	—
chr10_52471264_C_A	chr10:52471264	-0.012	0.008	-0.051	<0.001%
chr10_52471265_A_G	chr10:52471265	0.007	-0.006	0.051	—
chr10_52471277_G_C	chr10:52471277	-0.002	0.000	-0.051	—
chr10_52398166_T_G	chr10:52398166	0.006	0.001	0.048	—
chr10_52471269_T_C	chr10:52471269	0.009	-0.005	0.048	—
chr10_52473109_C_G	chr10:52473109	0.027	0.005	0.028	—
chr10_52473127_T_A	chr10:52473127	0.027	0.019	0.013	—
chr10_52473128_G_C	chr10:52473128	0.027	0.009	0.020	—
chr10_52398195_G_T	chr10:52398195	-0.009	-0.004	-0.047	—
chr10_52471321_T_G	chr10:52471321	0.010	-0.005	0.047	—
chr10_52473132_A_C	chr10:52473132	0.016	-0.010	0.047	—
chr10_52473136_G_C	chr10:52473136	0.022	-0.008	0.047	—
chr10_52473156_A_T	chr10:52473156	-0.026	-0.023	-0.044	—
chr10_52398164_T_G	chr10:52398164	0.010	-0.011	0.045	—
chr10_52398171_G_T	chr10:52398171	-0.007	-0.010	-0.045	—
chr10_52398190_A_G	chr10:52398190	0.007	-0.028	0.045	—
chr10_52471350_G_A	chr10:52471350	-0.006	-0.005	-0.045	—
chr10_52473131_C_A	chr10:52473131	0.026	0.013	-0.019	—
chr10_52473137_G_C	chr10:52473137	0.005	0.000	0.045	—
chr10_52398144_A_C	chr10:52398144	0.002	-0.004	0.044	—
chr10_52398178_G_C	chr10:52398178	0.005	0.010	0.044	—
chr10_52471319_A_G	chr10:52471319	0.000	-0.008	0.044	—
chr10_52473134_T_C	chr10:52473134	0.025	0.024	0.041	—
chr10_52473140_A_C	chr10:52473140	-0.002	-0.025	-0.044	—
chr10_52398164_T_C	chr10:52398164	0.005	-0.003	0.042	—
chr10_52398168_T_G	chr10:52398168	0.008	-0.010	0.042	—
chr10_52398177_A_C	chr10:52398177	0.005	-0.019	0.042	—
chr10_52398197_T_G	chr10:52398197	-0.010	-0.010	0.042	—
chr10_52471267_A_G	chr10:52471267	0.003	-0.008	0.042	—
chr10_52471278_C_T	chr10:52471278	-0.003	0.005	-0.042	0.0013%
chr10_52471285_T_G	chr10:52471285	0.016	-0.010	0.042	—
chr10_52471301_G_T	chr10:52471301	-0.024	0.000	0.006	—
chr10_52471309_C_A	chr10:52471309	-0.010	-0.001	-0.042	—
chr10_52471309_C_G	chr10:52471309	0.003	-0.010	-0.042	—
chr10_52398139_T_G	chr10:52398139	0.018	0.021	0.041	—
chr10_52471263_G_A	chr10:52471263	-0.009	0.000	-0.041	<0.001%
chr10_52471298_T_C	chr10:52471298	0.001	0.000	0.041	—
chr10_52471302_G_A	chr10:52471302	-0.010	0.013	-0.041	—
chr10_52471303_C_A	chr10:52471303	-0.019	0.010	-0.041	—
chr10_52471306_A_C	chr10:52471306	0.005	-0.008	0.041	—
chr10_52471309_C_T	chr10:52471309	0.003	0.015	-0.041	—
chr10_52471322_T_C	chr10:52471322	0.011	0.000	0.041	—
chr10_52473119_C_A	chr10:52473119	0.023	0.014	0.018	—
chr10_52473126_T_C	chr10:52473126	0.019	0.009	0.041	—
chr10_52473141_T_C	chr10:52473141	0.023	0.009	0.018	—
chr10_52398162_T_G	chr10:52398162	0.012	0.006	0.039	—
chr10_52398168_T_C	chr10:52398168	0.006	-0.001	0.039	—
chr10_52471280_T_C	chr10:52471280	0.009	0.000	0.039	—
chr10_52471295_T_G	chr10:52471295	0.022	0.001	0.032	—
chr10_52471307_G_T	chr10:52471307	-0.012	0.003	-0.039	—
chr10_52471349_G_T	chr10:52471349	0.022	0.013	-0.009	—
chr10_52471350_G_T	chr10:52471350	-0.008	-0.010	-0.039	—
chr10_52473114_C_A	chr10:52473114	0.005	-0.009	-0.039	—
chr10_52473130_G_T	chr10:52473130	-0.008	-0.013	-0.039	—
chr10_52473138_G_C	chr10:52473138	0.006	0.005	0.039	—
chr10_52473148_T_G	chr10:52473148	-0.021	-0.015	-0.039	—
chr10_52473123_T_G	chr10:52473123	0.022	0.008	0.007	—
chr10_52471270_G_A	chr10:52471270	-0.003	0.005	-0.038	—
chr10_52471272_C_A	chr10:52471272	-0.007	0.003	-0.038	—
chr10_52471288_T_G	chr10:52471288	-0.003	-0.005	0.038	—
chr10_52471324_A_C	chr10:52471324	0.004	0.000	0.038	—
chr10_52471339_G_C	chr10:52471339	0.010	0.013	0.038	—
chr10_52473122_A_G	chr10:52473122	0.022	0.001	0.004	0.0013%
chr10_52473132_A_T	chr10:52473132	0.022	0.018	0.019	—
chr10_52398149_T_G	chr10:52398149	0.003	0.004	0.037	—
chr10_52471258_G_T	chr10:52471258	-0.002	0.005	-0.037	0.0013%
chr10_52471259_C_A	chr10:52471259	-0.006	0.000	-0.037	—
chr10_52471272_C_T	chr10:52471272	-0.006	-0.003	-0.037	—
chr10_52471282_T_C	chr10:52471282	0.009	-0.013	0.037	—
chr10_52471297_G_A	chr10:52471297	-0.007	0.011	-0.037	—
chr10_52471338_A_C	chr10:52471338	0.002	-0.009	0.037	—
chr10_52473128_G_T	chr10:52473128	0.021	0.009	-0.001	—
chr10_52473157_C_T	chr10:52473157	-0.002	0.004	-0.037	—
chr10_52398179_T_G	chr10:52398179	0.020	0.015	-0.012	—
chr10_52398188_A_C	chr10:52398188	-0.000	-0.006	0.035	—
chr10_52398202_G_T	chr10:52398202	-0.010	-0.004	-0.035	—
chr10_52471259_C_T	chr10:52471259	-0.004	0.008	-0.035	—
chr10_52471278_C_A	chr10:52471278	-0.002	0.008	-0.035	—
chr10_52471297_G_T	chr10:52471297	-0.012	0.001	-0.035	0.0013%
chr10_52471303_C_T	chr10:52471303	-0.019	0.011	-0.035	—
chr10_52471308_G_A	chr10:52471308	0.003	0.013	-0.035	—
chr10_52471318_T_G	chr10:52471318	-0.006	-0.003	0.035	—
chr10_52473115_T_G	chr10:52473115	-0.000	-0.001	0.035	—
chr10_52473119_C_G	chr10:52473119	0.020	0.009	0.015	—
chr10_52398090_C_T	chr10:52398090	0.019	-0.004	-0.009	—
chr10_52398094_T_G	chr10:52398094	0.008	-0.005	0.034	—
chr10_52398153_G_C	chr10:52398153	0.006	-0.004	0.034	—
chr10_52398172_C_T	chr10:52398172	0.002	-0.001	-0.034	—
chr10_52471263_G_T	chr10:52471263	0.001	0.000	-0.034	—
chr10_52471270_G_T	chr10:52471270	-0.001	0.008	-0.034	—
chr10_52471271_G_A	chr10:52471271	0.019	0.003	0.000	—
chr10_52471271_G_T	chr10:52471271	-0.002	0.005	-0.034	—
chr10_52471303_C_G	chr10:52471303	-0.007	0.001	-0.034	—
chr10_52471307_G_A	chr10:52471307	-0.007	0.003	-0.034	—
chr10_52471310_A_C	chr10:52471310	0.017	-0.003	0.034	—
chr10_52471315_G_A	chr10:52471315	-0.018	0.008	-0.034	—
chr10_52473131_C_T	chr10:52473131	0.008	0.000	-0.034	—
chr10_52473142_C_A	chr10:52473142	0.019	0.030	-0.013	—
chr10_52473158_C_G	chr10:52473158	-0.007	-0.018	-0.034	—
chr10_52473107_A_T	chr10:52473107	0.018	0.057	0.010	—
chr10_52398161_T_G	chr10:52398161	0.005	-0.006	0.032	—
chr10_52398169_T_G	chr10:52398169	0.005	0.000	0.032	—
chr10_52398196_C_A	chr10:52398196	-0.002	0.001	-0.032	—
chr10_52471260_C_A	chr10:52471260	-0.011	0.000	-0.032	—
chr10_52471274_C_T	chr10:52471274	-0.006	0.003	-0.032	<0.001%
chr10_52471302_G_T	chr10:52471302	0.002	0.013	-0.032	—
chr10_52471322_T_A	chr10:52471322	0.018	0.005	-0.012	—
chr10_52471326_G_T	chr10:52471326	0.002	0.003	-0.032	—
chr10_52471331_G_T	chr10:52471331	0.006	0.023	0.032	—
chr10_52471347_T_C	chr10:52471347	-0.018	-0.009	0.015	—
chr10_52471348_G_T	chr10:52471348	-0.009	-0.003	-0.032	—
chr10_52473136_G_T	chr10:52473136	0.018	0.006	0.031	—
chr10_52473124_G_A	chr10:52473124	0.018	0.013	-0.026	—
chr10_52398134_G_C	chr10:52398134	0.007	-0.020	0.031	—
chr10_52398134_G_T	chr10:52398134	-0.017	-0.004	-0.020	—
chr10_52398147_A_G	chr10:52398147	0.000	-0.003	0.031	—
chr10_52398155_A_G	chr10:52398155	-0.010	-0.005	-0.031	—
chr10_52398187_G_T	chr10:52398187	-0.010	-0.008	-0.031	—
chr10_52398209_C_T	chr10:52398209	0.005	0.005	-0.031	—
chr10_52471247_T_G	chr10:52471247	0.006	-0.001	0.031	—
chr10_52471249_T_G	chr10:52471249	0.001	0.001	0.031	—
chr10_52471260_C_T	chr10:52471260	-0.004	0.005	-0.031	—
chr10_52471283_A_C	chr10:52471283	0.011	-0.003	0.031	—
chr10_52471292_G_A	chr10:52471292	-0.003	0.005	-0.031	—
chr10_52471295_T_A	chr10:52471295	0.017	0.006	-0.003	—
chr10_52471304_T_C	chr10:52471304	0.002	-0.008	0.031	—
chr10_52471327_C_T	chr10:52471327	-0.003	0.013	-0.031	—
chr10_52471340_A_G	chr10:52471340	0.005	0.000	0.031	<0.001%
chr10_52471349_G_A	chr10:52471349	0.006	0.005	-0.031	—
chr10_52473116_C_A	chr10:52473116	0.017	0.037	-0.016	—
chr10_52473120_A_T	chr10:52473120	0.017	0.001	-0.009	—
chr10_52473122_A_T	chr10:52473122	-0.012	-0.011	-0.031	—
chr10_52473129_A_T	chr10:52473129	0.017	-0.006	0.000	—
chr10_52473135_G_C	chr10:52473135	0.017	0.001	0.026	—
chr10_52473151_T_G	chr10:52473151	0.011	0.003	0.031	—
chr10_52473153_C_T	chr10:52473153	0.005	0.008	-0.031	0.0013%
chr10_52473158_C_A	chr10:52473158	-0.004	-0.009	-0.031	—
chr10_52473157_C_A	chr10:52473157	-0.017	-0.009	-0.028	—
chr10_52398129_T_G	chr10:52398129	0.005	0.003	0.029	—
chr10_52398148_T_G	chr10:52398148	0.002	0.001	0.029	—
chr10_52398171_G_C	chr10:52398171	-0.002	-0.009	-0.029	—
chr10_52398186_T_C	chr10:52398186	-0.000	-0.014	0.029	—
chr10_52398192_A_C	chr10:52398192	0.017	0.006	0.025	—
chr10_52398192_A_G	chr10:52398192	0.017	0.008	0.006	—
chr10_52471244_A_C	chr10:52471244	0.007	0.008	0.029	—
chr10_52471258_G_A	chr10:52471258	-0.004	0.005	-0.029	—
chr10_52471264_C_G	chr10:52471264	-0.007	0.000	-0.029	—
chr10_52471266_C_T	chr10:52471266	-0.002	0.003	-0.029	—
chr10_52471276_C_T	chr10:52471276	-0.006	0.003	-0.029	0.0013%
chr10_52471292_G_T	chr10:52471292	-0.009	0.003	-0.029	—
chr10_52471301_G_A	chr10:52471301	-0.010	0.015	-0.029	—
chr10_52471307_G_C	chr10:52471307	0.013	0.010	0.029	—
chr10_52471311_G_C	chr10:52471311	0.010	-0.006	0.029	—
chr10_52471329_A_C	chr10:52471329	0.012	0.001	0.029	—
chr10_52473116_C_G	chr10:52473116	0.017	0.014	0.015	—
chr10_52473125_G_A	chr10:52473125	0.017	0.016	-0.010	—
chr10_52473103_G_A	chr10:52473103	0.016	0.021	0.019	<0.001%
chr10_52473105_A_T	chr10:52473105	0.016	0.015	0.016	—
chr10_52398080_T_C	chr10:52398080	0.016	-0.015	0.018	—
chr10_52398146_T_C	chr10:52398146	-0.002	-0.001	0.028	—
chr10_52398172_C_A	chr10:52398172	0.003	0.006	-0.028	—
chr10_52398196_C_T	chr10:52398196	-0.004	-0.001	-0.028	<0.001%
chr10_52398202_G_C	chr10:52398202	-0.004	-0.001	-0.028	—
chr10_52471262_G_A	chr10:52471262	-0.011	0.000	-0.028	—
chr10_52471274_C_A	chr10:52471274	-0.001	0.003	-0.028	—
chr10_52471281_G_A	chr10:52471281	0.003	0.005	-0.028	—
chr10_52471282_T_G	chr10:52471282	0.012	-0.008	0.028	—
chr10_52471293_C_T	chr10:52471293	-0.015	-0.001	-0.028	—
chr10_52471294_T_G	chr10:52471294	0.012	0.003	0.028	—
chr10_52471296_T_C	chr10:52471296	0.006	0.000	0.028	—
chr10_52471301_G_C	chr10:52471301	0.005	0.015	0.028	—
chr10_52471318_T_C	chr10:52471318	0.002	-0.005	0.028	—
chr10_52471321_T_C	chr10:52471321	0.002	0.008	0.028	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.