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LOC105374338
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LOC105374338
chr4:477,167..684,866, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_499207_G_C | chr4:499207 | 0.730 | 0.260 | 0.501 | — |
| chr4_499244_C_A | chr4:499244 | 0.616 | 0.083 | 0.330 | — |
| chr4_499305_T_G | chr4:499305 | 0.593 | 0.296 | 0.195 | — |
| chr4_499172_G_T | chr4:499172 | 0.586 | 0.057 | -0.281 | — |
| chr4_499206_C_A | chr4:499206 | 0.585 | 0.021 | 0.171 | — |
| chr4_499205_A_C | chr4:499205 | 0.581 | 0.018 | 0.183 | — |
| chr4_499206_C_G | chr4:499206 | 0.581 | 0.125 | 0.379 | — |
| chr4_499202_G_T | chr4:499202 | 0.545 | 0.065 | 0.000 | — |
| chr4_499115_A_C | chr4:499115 | -0.543 | -0.187 | -0.305 | — |
| chr4_499252_C_G | chr4:499252 | -0.500 | -0.143 | -0.073 | — |
| chr4_499174_G_C | chr4:499174 | 0.477 | 0.161 | 0.684 | — |
| chr4_499207_G_A | chr4:499207 | 0.477 | 0.075 | 0.452 | — |
| chr4_499199_G_C | chr4:499199 | 0.157 | -0.112 | 0.843 | — |
| chr4_499202_G_C | chr4:499202 | 0.467 | 0.042 | 0.110 | — |
| chr4_499303_G_C | chr4:499303 | 0.466 | 0.166 | 0.440 | — |
| chr4_499173_T_G | chr4:499173 | 0.462 | 0.132 | -0.085 | — |
| chr4_499174_G_A | chr4:499174 | 0.458 | 0.042 | -0.024 | <0.001% |
| chr4_499200_A_G | chr4:499200 | 0.450 | -0.065 | 0.085 | — |
| chr4_499176_C_A | chr4:499176 | 0.443 | 0.039 | -0.012 | — |
| chr4_499207_G_T | chr4:499207 | 0.443 | 0.065 | 0.366 | — |
| chr4_499168_G_T | chr4:499168 | 0.427 | 0.161 | -0.049 | — |
| chr4_499269_A_C | chr4:499269 | -0.128 | -0.418 | -0.757 | — |
| chr4_499203_T_A | chr4:499203 | 0.421 | -0.114 | -0.147 | <0.001% |
| chr4_499293_C_G | chr4:499293 | -0.420 | -0.034 | 0.061 | — |
| chr4_499266_C_G | chr4:499266 | -0.237 | -0.327 | -0.745 | — |
| chr4_499269_A_T | chr4:499269 | -0.170 | -0.397 | -0.745 | — |
| chr4_499298_G_C | chr4:499298 | -0.040 | 0.034 | 0.745 | — |
| chr4_499203_T_C | chr4:499203 | 0.415 | -0.112 | -0.098 | — |
| chr4_499269_A_G | chr4:499269 | -0.165 | -0.408 | -0.733 | — |
| chr4_499319_A_G | chr4:499319 | 0.410 | 0.369 | 0.611 | — |
| chr4_499204_G_T | chr4:499204 | 0.407 | 0.083 | 0.000 | — |
| chr4_499203_T_G | chr4:499203 | 0.405 | -0.132 | -0.195 | — |
| chr4_499147_G_C | chr4:499147 | 0.170 | 0.351 | 0.708 | — |
| chr4_499205_A_T | chr4:499205 | 0.397 | 0.119 | 0.354 | — |
| chr4_499172_G_C | chr4:499172 | 0.390 | -0.065 | -0.403 | — |
| chr4_499267_G_C | chr4:499267 | -0.235 | -0.439 | -0.696 | — |
| chr4_499173_T_A | chr4:499173 | 0.383 | 0.021 | -0.305 | — |
| chr4_499204_G_A | chr4:499204 | 0.381 | 0.013 | -0.024 | — |
| chr4_499169_G_A | chr4:499169 | 0.374 | 0.169 | -0.195 | — |
| chr4_499303_G_T | chr4:499303 | 0.374 | 0.094 | 0.183 | — |
| chr4_499169_G_C | chr4:499169 | 0.373 | 0.086 | -0.220 | — |
| chr4_499199_G_A | chr4:499199 | 0.369 | 0.055 | 0.220 | — |
| chr4_499267_G_T | chr4:499267 | -0.227 | -0.387 | -0.660 | — |
| chr4_499290_A_G | chr4:499290 | 0.368 | 0.143 | 0.000 | — |
| chr4_499342_C_G | chr4:499342 | -0.366 | -0.088 | -0.049 | — |
| chr4_499266_C_T | chr4:499266 | -0.198 | -0.348 | -0.647 | 0.0046% |
| chr4_499271_G_T | chr4:499271 | -0.196 | -0.340 | -0.647 | — |
| chr4_499176_C_G | chr4:499176 | 0.356 | 0.148 | 0.220 | — |
| chr4_499170_A_T | chr4:499170 | 0.354 | -0.052 | -0.452 | — |
| chr4_499175_A_T | chr4:499175 | 0.349 | -0.010 | -0.098 | — |
| chr4_499267_G_A | chr4:499267 | -0.204 | -0.403 | -0.623 | — |
| chr4_499171_A_G | chr4:499171 | 0.347 | 0.161 | -0.037 | — |
| chr4_499170_A_C | chr4:499170 | 0.344 | 0.070 | -0.391 | — |
| chr4_499135_G_C | chr4:499135 | -0.197 | -0.236 | -0.611 | — |
| chr4_499169_G_T | chr4:499169 | 0.342 | 0.078 | -0.305 | — |
| chr4_499290_A_T | chr4:499290 | 0.338 | 0.070 | 0.122 | — |
| chr4_499168_G_A | chr4:499168 | 0.337 | 0.208 | -0.012 | — |
| chr4_499303_G_A | chr4:499303 | 0.324 | 0.062 | 0.110 | — |
| chr4_499206_C_T | chr4:499206 | 0.315 | 0.130 | 0.379 | — |
| chr4_499268_G_A | chr4:499268 | -0.154 | -0.299 | -0.562 | — |
| chr4_499270_A_G | chr4:499270 | -0.030 | -0.421 | -0.562 | 0.0059% |
| chr4_499177_G_C | chr4:499177 | 0.313 | 0.081 | 0.073 | — |
| chr4_499270_A_C | chr4:499270 | -0.105 | -0.356 | -0.550 | — |
| chr4_499168_G_C | chr4:499168 | 0.306 | 0.200 | -0.085 | — |
| chr4_499170_A_G | chr4:499170 | 0.306 | 0.096 | -0.379 | — |
| chr4_499177_G_T | chr4:499177 | 0.304 | 0.114 | 0.244 | — |
| chr4_499174_G_T | chr4:499174 | 0.301 | 0.039 | -0.073 | — |
| chr4_499268_G_T | chr4:499268 | -0.074 | -0.306 | -0.537 | — |
| chr4_499299_G_C | chr4:499299 | 0.299 | 0.078 | 0.403 | — |
| chr4_499067_C_G | chr4:499067 | -0.293 | -0.052 | -0.110 | — |
| chr4_499300_T_C | chr4:499300 | 0.286 | 0.106 | 0.330 | <0.001% |
| chr4_499167_C_G | chr4:499167 | 0.282 | 0.073 | -0.098 | — |
| chr4_499167_C_T | chr4:499167 | 0.282 | 0.073 | -0.232 | <0.001% |
| chr4_499268_G_C | chr4:499268 | -0.062 | -0.327 | -0.501 | — |
| chr4_499123_C_A | chr4:499123 | 0.271 | 0.169 | 0.489 | 0.017% |
| chr4_499132_T_A | chr4:499132 | -0.273 | -0.143 | -0.452 | — |
| chr4_499317_C_T | chr4:499317 | 0.268 | 0.177 | 0.293 | — |
| chr4_499265_C_T | chr4:499265 | -0.215 | -0.273 | -0.476 | — |
| chr4_498928_G_A | chr4:498928 | 0.070 | 0.064 | 0.497 | 0.023% |
| chr4_498934_C_G | chr4:498934 | 0.096 | 0.022 | 0.484 | <0.001% |
| chr4_499271_G_C | chr4:499271 | -0.128 | -0.281 | -0.452 | — |
| chr4_499135_G_T | chr4:499135 | -0.252 | -0.057 | -0.269 | — |
| chr4_499258_C_T | chr4:499258 | 0.252 | 0.047 | 0.342 | — |
| chr4_499264_G_A | chr4:499264 | 0.250 | 0.179 | 0.342 | <0.001% |
| chr4_499133_A_T | chr4:499133 | -0.217 | -0.138 | -0.440 | 0.0026% |
| chr4_499175_A_C | chr4:499175 | 0.243 | -0.075 | -0.256 | — |
| chr4_499306_C_T | chr4:499306 | 0.243 | 0.122 | 0.061 | <0.001% |
| chr4_499178_C_G | chr4:499178 | 0.241 | 0.044 | 0.073 | — |
| chr4_499205_A_G | chr4:499205 | 0.241 | 0.083 | 0.366 | — |
| chr4_498912_G_C | chr4:498912 | 0.126 | 0.032 | 0.458 | <0.001% |
| chr4_499133_A_C | chr4:499133 | -0.221 | -0.151 | -0.427 | 0.0020% |
| chr4_499291_G_T | chr4:499291 | -0.156 | -0.151 | -0.427 | — |
| chr4_499308_G_C | chr4:499308 | 0.207 | 0.304 | 0.427 | — |
| chr4_499173_T_C | chr4:499173 | 0.236 | -0.016 | -0.318 | — |
| chr4_499122_C_A | chr4:499122 | 0.020 | -0.003 | 0.415 | — |
| chr4_499294_T_G | chr4:499294 | 0.232 | 0.182 | 0.183 | — |
| chr4_499223_C_A | chr4:499223 | 0.232 | 0.005 | 0.183 | — |
| chr4_499227_A_G | chr4:499227 | -0.229 | -0.094 | -0.134 | — |
| chr4_499301_G_C | chr4:499301 | 0.229 | 0.109 | 0.183 | — |
| chr4_499324_A_C | chr4:499324 | -0.229 | -0.052 | 0.073 | — |
| chr4_498807_C_T | chr4:498807 | 0.040 | 0.217 | 0.431 | <0.001% |
| chr4_499265_C_A | chr4:499265 | -0.139 | -0.166 | -0.403 | — |
| chr4_499307_G_A | chr4:499307 | 0.226 | 0.273 | 0.269 | — |
| chr4_499204_G_C | chr4:499204 | 0.224 | -0.031 | -0.232 | — |
| chr4_499176_C_T | chr4:499176 | 0.221 | 0.117 | 0.110 | — |
| chr4_498937_G_C | chr4:498937 | 0.042 | 0.029 | 0.418 | <0.001% |
| chr4_499270_A_T | chr4:499270 | -0.059 | -0.283 | -0.391 | — |
| chr4_499098_G_A | chr4:499098 | -0.215 | -0.062 | -0.134 | — |
| chr4_499191_C_T | chr4:499191 | 0.137 | 0.138 | 0.379 | — |
| chr4_499240_A_G | chr4:499240 | -0.132 | -0.164 | -0.379 | — |
| chr4_499239_T_C | chr4:499239 | -0.210 | -0.044 | -0.012 | — |
| chr4_499301_G_T | chr4:499301 | 0.209 | 0.122 | 0.122 | — |
| chr4_499130_C_G | chr4:499130 | 0.208 | -0.062 | 0.110 | <0.001% |
| chr4_499149_C_G | chr4:499149 | -0.207 | -0.060 | -0.061 | — |
| chr4_499145_A_C | chr4:499145 | -0.186 | -0.174 | -0.366 | — |
| chr4_499297_A_G | chr4:499297 | 0.080 | -0.018 | 0.366 | <0.001% |
| chr4_499315_A_C | chr4:499315 | 0.202 | 0.192 | 0.366 | — |
| chr4_499142_G_T | chr4:499142 | -0.199 | -0.029 | -0.281 | <0.001% |
| chr4_499272_C_T | chr4:499272 | 0.163 | 0.192 | 0.354 | 0.0046% |
| chr4_499150_C_A | chr4:499150 | -0.195 | 0.052 | 0.256 | 0.0020% |
| chr4_499149_C_A | chr4:499149 | -0.194 | 0.081 | 0.281 | — |
| chr4_499178_C_A | chr4:499178 | 0.193 | 0.039 | 0.073 | — |
| chr4_499209_C_T | chr4:499209 | 0.193 | 0.010 | 0.024 | <0.001% |
| chr4_499228_A_G | chr4:499228 | -0.193 | -0.099 | -0.281 | — |
| chr4_499287_G_A | chr4:499287 | -0.192 | -0.094 | -0.171 | <0.001% |
| chr4_498906_A_C | chr4:498906 | 0.117 | 0.019 | 0.366 | <0.001% |
| chr4_499071_G_C | chr4:499071 | -0.191 | -0.026 | -0.110 | — |
| chr4_499251_G_A | chr4:499251 | -0.158 | -0.049 | -0.342 | <0.001% |
| chr4_499347_C_G | chr4:499347 | -0.191 | -0.052 | 0.000 | — |
| chr4_499094_G_A | chr4:499094 | -0.188 | -0.075 | 0.049 | — |
| chr4_498860_G_C | chr4:498860 | 0.075 | 0.029 | 0.359 | <0.001% |
| chr4_499134_T_C | chr4:499134 | -0.188 | -0.068 | -0.171 | <0.001% |
| chr4_499150_C_G | chr4:499150 | -0.188 | 0.013 | 0.000 | — |
| chr4_499208_C_G | chr4:499208 | 0.188 | 0.060 | 0.134 | <0.001% |
| chr4_499285_G_C | chr4:499285 | -0.188 | -0.047 | -0.061 | <0.001% |
| chr4_499148_C_T | chr4:499148 | -0.187 | 0.132 | 0.305 | — |
| chr4_499236_C_G | chr4:499236 | 0.185 | 0.140 | 0.110 | — |
| chr4_498988_T_C | chr4:498988 | 0.037 | 0.032 | 0.353 | 0.0013% |
| chr4_499161_G_T | chr4:499161 | 0.024 | 0.060 | 0.330 | — |
| chr4_499163_C_G | chr4:499163 | 0.075 | 0.158 | 0.330 | — |
| chr4_499190_G_A | chr4:499190 | 0.113 | 0.122 | 0.330 | — |
| chr4_499286_G_A | chr4:499286 | -0.114 | -0.052 | -0.330 | — |
| chr4_499141_G_C | chr4:499141 | -0.183 | -0.065 | -0.232 | — |
| chr4_499171_A_T | chr4:499171 | 0.183 | 0.104 | 0.110 | — |
| chr4_499217_C_A | chr4:499217 | 0.183 | -0.029 | 0.110 | — |
| chr4_499227_A_T | chr4:499227 | -0.183 | -0.044 | -0.256 | — |
| chr4_499075_G_C | chr4:499075 | -0.181 | -0.026 | 0.000 | — |
| chr4_499091_G_T | chr4:499091 | 0.180 | 0.031 | -0.147 | — |
| chr4_499225_A_C | chr4:499225 | -0.179 | -0.078 | -0.256 | — |
| chr4_499242_T_C | chr4:499242 | 0.179 | -0.078 | 0.073 | — |
| chr4_499141_G_A | chr4:499141 | -0.179 | -0.062 | -0.171 | — |
| chr4_498897_T_G | chr4:498897 | 0.088 | 0.038 | 0.340 | <0.001% |
| chr4_498732_T_C | chr4:498732 | -0.005 | 0.029 | 0.333 | 0.0053% |
| chr4_499143_T_A | chr4:499143 | -0.174 | -0.164 | -0.269 | — |
| chr4_499284_A_T | chr4:499284 | 0.174 | 0.034 | -0.012 | — |
| chr4_499287_G_C | chr4:499287 | -0.174 | -0.057 | -0.049 | <0.001% |
| chr4_499256_T_G | chr4:499256 | 0.173 | 0.075 | 0.232 | — |
| chr4_499288_C_A | chr4:499288 | -0.173 | -0.044 | -0.220 | — |
| chr4_499305_T_C | chr4:499305 | 0.173 | -0.010 | 0.037 | — |
| chr4_499286_G_C | chr4:499286 | -0.172 | -0.073 | -0.183 | — |
| chr4_498699_G_T | chr4:498699 | -0.150 | -0.153 | -0.327 | 0.0040% |
| chr4_498702_G_T | chr4:498702 | -0.119 | -0.022 | -0.327 | 0.0020% |
| chr4_498981_C_T | chr4:498981 | 0.071 | 0.064 | 0.327 | <0.001% |
| chr4_499158_G_T | chr4:499158 | 0.042 | 0.125 | 0.305 | — |
| chr4_499160_G_A | chr4:499160 | 0.125 | 0.106 | 0.305 | 0.0033% |
| chr4_499192_G_A | chr4:499192 | 0.002 | 0.081 | 0.305 | — |
| chr4_499245_T_A | chr4:499245 | 0.074 | 0.060 | 0.305 | — |
| chr4_499298_G_T | chr4:499298 | -0.171 | -0.016 | 0.147 | — |
| chr4_499320_G_T | chr4:499320 | -0.090 | -0.091 | -0.305 | — |
| chr4_499098_G_C | chr4:499098 | -0.167 | -0.078 | -0.171 | — |
| chr4_499067_C_T | chr4:499067 | -0.166 | -0.018 | -0.012 | — |
| chr4_499287_G_T | chr4:499287 | -0.166 | -0.081 | -0.110 | — |
| chr4_499299_G_A | chr4:499299 | 0.165 | 0.000 | 0.159 | — |
| chr4_499209_C_A | chr4:499209 | 0.137 | 0.184 | 0.293 | — |
| chr4_499229_G_T | chr4:499229 | -0.164 | -0.060 | -0.195 | — |
| chr4_499321_C_A | chr4:499321 | -0.164 | -0.026 | -0.098 | — |
| chr4_499337_T_G | chr4:499337 | 0.015 | 0.070 | 0.293 | — |
| chr4_499111_G_T | chr4:499111 | 0.162 | 0.101 | 0.122 | — |
| chr4_499306_C_A | chr4:499306 | 0.161 | 0.083 | 0.012 | — |
| chr4_499295_C_G | chr4:499295 | 0.160 | 0.086 | 0.147 | — |
| chr4_499200_A_C | chr4:499200 | 0.159 | -0.140 | -0.208 | — |
| chr4_499116_C_A | chr4:499116 | -0.158 | -0.029 | -0.244 | — |
| chr4_499087_C_G | chr4:499087 | -0.158 | -0.065 | -0.024 | — |
| chr4_498917_G_A | chr4:498917 | 0.059 | 0.026 | 0.301 | <0.001% |
| chr4_498954_G_C | chr4:498954 | -0.009 | -0.019 | 0.301 | <0.001% |
| chr4_498990_C_A | chr4:498990 | 0.109 | 0.051 | 0.301 | <0.001% |
| chr4_499088_C_G | chr4:499088 | -0.157 | -0.034 | 0.000 | — |
| chr4_499140_A_C | chr4:499140 | -0.094 | -0.122 | -0.281 | — |
| chr4_499160_G_C | chr4:499160 | 0.157 | -0.008 | 0.159 | <0.001% |
| chr4_499164_T_A | chr4:499164 | -0.005 | 0.070 | 0.281 | — |
| chr4_499257_A_T | chr4:499257 | 0.058 | 0.096 | 0.281 | — |
| chr4_499274_C_T | chr4:499274 | -0.041 | 0.018 | 0.281 | — |
| chr4_499285_G_A | chr4:499285 | -0.157 | -0.003 | -0.122 | — |
| chr4_499177_G_A | chr4:499177 | 0.156 | 0.088 | 0.147 | — |
| chr4_499325_G_A | chr4:499325 | -0.156 | -0.010 | -0.110 | — |
| chr4_498689_A_G | chr4:498689 | 0.183 | 0.080 | 0.294 | 0.0013% |
| chr4_499054_A_C | chr4:499054 | -0.154 | -0.094 | -0.061 | — |
| chr4_499232_C_G | chr4:499232 | -0.154 | -0.122 | -0.159 | — |
| chr4_499302_G_C | chr4:499302 | 0.154 | -0.088 | -0.098 | — |
| chr4_499086_G_C | chr4:499086 | -0.153 | -0.021 | -0.134 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.