Home / Gene
LOC105378948
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LOC105378948
chr1:965,634..1,169,337, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_966498_G_T | chr1:966498 | 0.851 | 0.618 | 1.000 | — |
| chr1_966403_A_G | chr1:966403 | 0.190 | 0.345 | 0.959 | <0.001% |
| chr1_966415_C_T | chr1:966415 | -0.406 | -0.176 | -0.889 | <0.001% |
| chr1_966454_G_C | chr1:966454 | -0.487 | -0.277 | -0.678 | — |
| chr1_966368_A_T | chr1:966368 | 0.313 | 0.217 | 0.842 | — |
| chr1_966410_C_G | chr1:966410 | -0.472 | -0.181 | -0.737 | — |
| chr1_966442_G_T | chr1:966442 | 0.202 | 0.209 | 0.830 | — |
| chr1_966486_G_T | chr1:966486 | -0.214 | -0.116 | -0.772 | — |
| chr1_966414_A_C | chr1:966414 | -0.407 | -0.116 | -0.561 | — |
| chr1_966459_G_C | chr1:966459 | -0.407 | -0.169 | -0.702 | — |
| chr1_966413_C_G | chr1:966413 | -0.404 | -0.217 | -0.596 | — |
| chr1_966440_C_G | chr1:966440 | -0.379 | -0.156 | -0.690 | — |
| chr1_966412_C_G | chr1:966412 | -0.376 | -0.161 | -0.526 | <0.001% |
| chr1_966412_C_T | chr1:966412 | -0.376 | -0.146 | -0.491 | — |
| chr1_966446_G_T | chr1:966446 | 0.358 | 0.227 | 0.561 | — |
| chr1_966476_G_T | chr1:966476 | -0.267 | -0.219 | -0.620 | — |
| chr1_966393_G_C | chr1:966393 | 0.348 | -0.010 | 0.094 | — |
| chr1_966473_G_T | chr1:966473 | -0.217 | -0.160 | -0.608 | — |
| chr1_966416_C_G | chr1:966416 | -0.339 | -0.098 | -0.269 | — |
| chr1_966231_G_C | chr1:966231 | 0.131 | 0.050 | 0.596 | — |
| chr1_966396_C_A | chr1:966396 | -0.209 | -0.209 | -0.596 | <0.001% |
| chr1_966426_G_A | chr1:966426 | -0.318 | -0.171 | -0.596 | — |
| chr1_966413_C_T | chr1:966413 | -0.336 | -0.116 | -0.444 | — |
| chr1_966384_T_C | chr1:966384 | 0.060 | -0.030 | 0.585 | — |
| chr1_966410_C_T | chr1:966410 | -0.331 | -0.083 | -0.526 | — |
| chr1_966452_G_T | chr1:966452 | 0.257 | 0.202 | 0.585 | — |
| chr1_966410_C_A | chr1:966410 | -0.328 | -0.121 | -0.456 | — |
| chr1_966436_C_T | chr1:966436 | 0.326 | 0.086 | 0.480 | 0.0013% |
| chr1_966383_G_A | chr1:966383 | 0.321 | -0.168 | 0.468 | — |
| chr1_966415_C_G | chr1:966415 | -0.296 | -0.150 | -0.561 | — |
| chr1_966472_A_C | chr1:966472 | -0.118 | -0.137 | -0.561 | — |
| chr1_966474_G_T | chr1:966474 | -0.222 | -0.171 | -0.561 | — |
| chr1_966390_C_G | chr1:966390 | 0.313 | -0.006 | -0.175 | — |
| chr1_966230_G_C | chr1:966230 | 0.068 | -0.003 | 0.550 | — |
| chr1_966474_G_A | chr1:966474 | -0.220 | -0.154 | -0.550 | — |
| chr1_966474_G_C | chr1:966474 | -0.192 | -0.173 | -0.550 | — |
| chr1_966476_G_C | chr1:966476 | -0.233 | -0.207 | -0.550 | — |
| chr1_966516_C_G | chr1:966516 | 0.066 | 0.091 | 0.550 | — |
| chr1_966412_C_A | chr1:966412 | -0.310 | -0.121 | -0.409 | — |
| chr1_966436_C_A | chr1:966436 | 0.310 | 0.118 | 0.421 | — |
| chr1_966494_A_G | chr1:966494 | 0.308 | 0.207 | 0.421 | — |
| chr1_966415_C_A | chr1:966415 | -0.285 | -0.113 | -0.538 | — |
| chr1_966367_G_C | chr1:966367 | -0.096 | -0.064 | -0.526 | — |
| chr1_966416_C_A | chr1:966416 | -0.298 | -0.063 | -0.304 | — |
| chr1_966459_G_T | chr1:966459 | -0.295 | -0.145 | -0.468 | — |
| chr1_966403_A_T | chr1:966403 | 0.131 | 0.222 | 0.515 | — |
| chr1_966499_G_T | chr1:966499 | -0.066 | -0.009 | -0.515 | — |
| chr1_966413_C_A | chr1:966413 | -0.290 | -0.088 | -0.398 | — |
| chr1_966460_C_T | chr1:966460 | -0.290 | -0.209 | -0.386 | — |
| chr1_966417_C_A | chr1:966417 | -0.286 | -0.071 | -0.480 | — |
| chr1_966381_A_C | chr1:966381 | 0.184 | -0.010 | 0.503 | — |
| chr1_966463_G_A | chr1:966463 | 0.253 | 0.123 | 0.503 | — |
| chr1_966416_C_T | chr1:966416 | -0.281 | -0.038 | -0.234 | — |
| chr1_966231_G_A | chr1:966231 | 0.116 | 0.040 | 0.491 | — |
| chr1_966486_G_A | chr1:966486 | 0.204 | 0.128 | 0.491 | — |
| chr1_966411_T_A | chr1:966411 | -0.275 | -0.098 | -0.480 | — |
| chr1_966367_G_T | chr1:966367 | -0.129 | -0.055 | -0.480 | — |
| chr1_966371_T_G | chr1:966371 | 0.114 | 0.033 | 0.480 | — |
| chr1_966384_T_A | chr1:966384 | -0.018 | -0.058 | 0.480 | — |
| chr1_966434_G_A | chr1:966434 | -0.164 | -0.047 | -0.480 | — |
| chr1_966472_A_T | chr1:966472 | -0.157 | -0.113 | -0.480 | — |
| chr1_966460_C_G | chr1:966460 | -0.270 | -0.209 | -0.398 | — |
| chr1_966461_C_A | chr1:966461 | -0.270 | -0.193 | -0.234 | — |
| chr1_966466_C_G | chr1:966466 | 0.270 | 0.023 | 0.070 | — |
| chr1_966179_G_A | chr1:966179 | 0.122 | 0.043 | 0.523 | 71.7% |
| chr1_966430_T_A | chr1:966430 | -0.088 | -0.038 | -0.468 | — |
| chr1_966460_C_A | chr1:966460 | -0.265 | -0.191 | -0.398 | — |
| chr1_966382_G_C | chr1:966382 | -0.007 | -0.065 | 0.456 | — |
| chr1_966411_T_C | chr1:966411 | -0.202 | -0.091 | -0.456 | — |
| chr1_966480_G_T | chr1:966480 | 0.257 | 0.111 | 0.363 | — |
| chr1_966321_G_A | chr1:966321 | -0.081 | -0.065 | -0.444 | — |
| chr1_966498_G_C | chr1:966498 | 0.252 | 0.084 | 0.175 | — |
| chr1_966461_C_G | chr1:966461 | -0.248 | -0.159 | -0.175 | — |
| chr1_966499_G_A | chr1:966499 | 0.232 | 0.137 | 0.433 | — |
| chr1_966501_C_G | chr1:966501 | 0.202 | 0.093 | 0.433 | 0.0013% |
| chr1_966230_G_A | chr1:966230 | 0.088 | 0.030 | 0.421 | — |
| chr1_966385_A_G | chr1:966385 | -0.214 | -0.126 | -0.421 | <0.001% |
| chr1_966462_T_G | chr1:966462 | -0.225 | -0.236 | -0.421 | — |
| chr1_966502_C_G | chr1:966502 | 0.192 | 0.106 | 0.421 | — |
| chr1_966513_G_C | chr1:966513 | -0.106 | -0.077 | -0.421 | — |
| chr1_966417_C_G | chr1:966417 | -0.235 | -0.045 | -0.339 | — |
| chr1_966480_G_C | chr1:966480 | 0.233 | 0.015 | 0.281 | — |
| chr1_966281_G_C | chr1:966281 | 0.232 | 0.073 | 0.164 | — |
| chr1_966419_C_G | chr1:966419 | -0.225 | -0.081 | -0.409 | — |
| chr1_966459_G_A | chr1:966459 | -0.171 | -0.113 | -0.409 | 0.0020% |
| chr1_966476_G_A | chr1:966476 | -0.225 | -0.156 | -0.409 | 0.0059% |
| chr1_966501_C_A | chr1:966501 | 0.212 | 0.103 | 0.409 | — |
| chr1_966502_C_A | chr1:966502 | 0.166 | 0.093 | 0.409 | — |
| chr1_966418_T_G | chr1:966418 | -0.230 | -0.116 | -0.374 | — |
| chr1_966409_G_C | chr1:966409 | -0.227 | -0.125 | -0.269 | — |
| chr1_966231_G_T | chr1:966231 | 0.104 | 0.038 | 0.398 | — |
| chr1_966395_C_T | chr1:966395 | -0.098 | -0.067 | -0.398 | — |
| chr1_966405_A_G | chr1:966405 | 0.192 | 0.040 | 0.398 | — |
| chr1_966419_C_A | chr1:966419 | -0.180 | -0.101 | -0.398 | — |
| chr1_966420_G_C | chr1:966420 | -0.118 | -0.106 | -0.398 | — |
| chr1_966435_C_A | chr1:966435 | 0.182 | 0.150 | 0.398 | — |
| chr1_966445_C_G | chr1:966445 | -0.225 | -0.145 | -0.304 | — |
| chr1_966449_C_A | chr1:966449 | 0.033 | 0.125 | 0.398 | — |
| chr1_966461_C_T | chr1:966461 | -0.225 | -0.160 | -0.246 | — |
| chr1_966475_C_G | chr1:966475 | -0.214 | -0.025 | -0.398 | — |
| chr1_966419_C_T | chr1:966419 | -0.182 | -0.065 | -0.386 | 0.017% |
| chr1_966445_C_T | chr1:966445 | -0.202 | -0.118 | -0.386 | — |
| chr1_966463_G_C | chr1:966463 | 0.194 | 0.111 | 0.386 | — |
| chr1_966442_G_A | chr1:966442 | -0.215 | -0.139 | -0.269 | — |
| chr1_966232_G_A | chr1:966232 | 0.056 | -0.003 | 0.374 | 0.0026% |
| chr1_966232_G_C | chr1:966232 | 0.045 | -0.011 | 0.374 | — |
| chr1_966438_G_C | chr1:966438 | -0.212 | -0.134 | -0.199 | 0.0013% |
| chr1_966458_C_T | chr1:966458 | -0.212 | -0.126 | -0.339 | 0.0026% |
| chr1_966516_C_A | chr1:966516 | 0.003 | -0.030 | 0.374 | — |
| chr1_966458_C_A | chr1:966458 | -0.210 | -0.126 | -0.339 | — |
| chr1_966480_G_A | chr1:966480 | 0.210 | 0.083 | 0.339 | 0.0013% |
| chr1_966406_A_T | chr1:966406 | 0.209 | 0.106 | 0.269 | — |
| chr1_966438_G_T | chr1:966438 | -0.207 | -0.078 | -0.117 | <0.001% |
| chr1_966454_G_T | chr1:966454 | -0.207 | -0.106 | -0.222 | — |
| chr1_966371_T_A | chr1:966371 | 0.071 | 0.020 | 0.363 | — |
| chr1_966381_A_T | chr1:966381 | 0.007 | -0.063 | 0.363 | — |
| chr1_966402_C_A | chr1:966402 | -0.101 | -0.065 | -0.363 | — |
| chr1_966411_T_G | chr1:966411 | -0.154 | -0.108 | -0.363 | — |
| chr1_966455_C_A | chr1:966455 | -0.187 | -0.072 | -0.363 | — |
| chr1_966463_G_T | chr1:966463 | 0.167 | 0.096 | 0.363 | — |
| chr1_966485_A_G | chr1:966485 | -0.162 | -0.084 | -0.363 | — |
| chr1_966488_C_A | chr1:966488 | -0.109 | -0.045 | -0.363 | — |
| chr1_966444_A_T | chr1:966444 | -0.204 | -0.134 | -0.316 | — |
| chr1_966414_A_G | chr1:966414 | 0.200 | 0.058 | 0.292 | — |
| chr1_966382_G_A | chr1:966382 | -0.199 | -0.162 | -0.070 | — |
| chr1_966458_C_G | chr1:966458 | -0.162 | -0.139 | -0.351 | — |
| chr1_966471_G_T | chr1:966471 | 0.091 | 0.072 | 0.351 | — |
| chr1_966504_A_C | chr1:966504 | -0.197 | -0.107 | -0.351 | — |
| chr1_966442_G_C | chr1:966442 | -0.197 | -0.121 | -0.152 | — |
| chr1_966238_G_T | chr1:966238 | 0.180 | 0.065 | -0.339 | — |
| chr1_966388_G_C | chr1:966388 | 0.154 | 0.055 | 0.339 | — |
| chr1_966452_G_A | chr1:966452 | 0.190 | 0.113 | 0.316 | — |
| chr1_966440_C_T | chr1:966440 | -0.189 | -0.045 | -0.281 | 0.014% |
| chr1_966381_A_G | chr1:966381 | -0.012 | -0.057 | 0.327 | — |
| chr1_966383_G_C | chr1:966383 | 0.003 | -0.084 | 0.327 | 0.0013% |
| chr1_966385_A_C | chr1:966385 | 0.149 | 0.010 | 0.327 | — |
| chr1_966387_G_T | chr1:966387 | 0.132 | 0.110 | 0.327 | — |
| chr1_966434_G_T | chr1:966434 | 0.055 | 0.108 | 0.327 | — |
| chr1_966516_C_T | chr1:966516 | 0.026 | -0.013 | 0.327 | — |
| chr1_966229_G_C | chr1:966229 | 0.182 | 0.078 | 0.187 | <0.001% |
| chr1_966341_C_A | chr1:966341 | -0.162 | -0.047 | -0.316 | — |
| chr1_966366_A_T | chr1:966366 | 0.179 | 0.194 | 0.304 | — |
| chr1_966378_C_G | chr1:966378 | 0.179 | 0.179 | 0.234 | — |
| chr1_966431_G_C | chr1:966431 | 0.023 | -0.112 | 0.316 | — |
| chr1_966352_A_G | chr1:966352 | -0.175 | -0.065 | -0.281 | — |
| chr1_966237_G_T | chr1:966237 | 0.142 | 0.067 | -0.304 | — |
| chr1_966434_G_C | chr1:966434 | -0.146 | -0.102 | -0.304 | — |
| chr1_966470_G_T | chr1:966470 | -0.172 | -0.092 | -0.187 | — |
| chr1_966477_G_A | chr1:966477 | -0.152 | -0.118 | -0.304 | — |
| chr1_966497_G_T | chr1:966497 | 0.119 | 0.122 | 0.304 | — |
| chr1_966490_G_T | chr1:966490 | 0.169 | 0.108 | 0.105 | — |
| chr1_966238_G_C | chr1:966238 | 0.166 | 0.060 | -0.129 | — |
| chr1_966365_G_A | chr1:966365 | 0.139 | 0.116 | 0.292 | — |
| chr1_966366_A_C | chr1:966366 | 0.146 | 0.093 | 0.292 | — |
| chr1_966475_C_A | chr1:966475 | -0.141 | -0.073 | -0.292 | — |
| chr1_966475_C_T | chr1:966475 | -0.104 | -0.068 | -0.292 | 0.0059% |
| chr1_966478_G_C | chr1:966478 | -0.109 | -0.149 | -0.292 | — |
| chr1_966502_C_T | chr1:966502 | 0.162 | 0.043 | 0.292 | <0.001% |
| chr1_966535_G_C | chr1:966535 | 0.166 | 0.083 | 0.105 | — |
| chr1_966278_T_C | chr1:966278 | 0.046 | 0.000 | 0.281 | — |
| chr1_966356_C_T | chr1:966356 | -0.121 | -0.063 | -0.281 | <0.001% |
| chr1_966395_C_A | chr1:966395 | -0.083 | -0.074 | -0.281 | — |
| chr1_966454_G_A | chr1:966454 | -0.159 | -0.020 | -0.105 | — |
| chr1_966436_C_G | chr1:966436 | 0.157 | 0.035 | 0.164 | — |
| chr1_966462_T_A | chr1:966462 | -0.157 | -0.128 | -0.234 | — |
| chr1_966391_C_G | chr1:966391 | 0.154 | -0.030 | 0.140 | — |
| chr1_966237_G_A | chr1:966237 | 0.114 | 0.063 | -0.269 | — |
| chr1_966239_A_T | chr1:966239 | -0.007 | -0.013 | -0.269 | — |
| chr1_966368_A_G | chr1:966368 | -0.008 | 0.005 | 0.269 | — |
| chr1_966396_C_G | chr1:966396 | -0.084 | -0.106 | -0.269 | — |
| chr1_966402_C_T | chr1:966402 | -0.070 | -0.025 | -0.269 | — |
| chr1_966447_T_C | chr1:966447 | -0.126 | -0.068 | -0.269 | — |
| chr1_966456_C_T | chr1:966456 | 0.071 | 0.071 | 0.269 | 0.023% |
| chr1_966512_C_A | chr1:966512 | -0.096 | -0.073 | -0.269 | — |
| chr1_966477_G_T | chr1:966477 | -0.151 | -0.073 | -0.257 | — |
| chr1_966271_A_C | chr1:966271 | 0.149 | 0.030 | 0.070 | — |
| chr1_966443_G_C | chr1:966443 | -0.149 | -0.065 | -0.129 | — |
| chr1_966224_T_C | chr1:966224 | 0.003 | 0.047 | 0.257 | — |
| chr1_966232_G_T | chr1:966232 | 0.022 | -0.025 | 0.257 | — |
| chr1_966238_G_A | chr1:966238 | 0.109 | 0.058 | -0.257 | — |
| chr1_966345_C_T | chr1:966345 | -0.055 | -0.048 | -0.257 | 0.090% |
| chr1_966377_G_T | chr1:966377 | -0.111 | -0.050 | -0.257 | — |
| chr1_966409_G_A | chr1:966409 | -0.089 | -0.065 | -0.257 | — |
| chr1_966430_T_G | chr1:966430 | -0.088 | -0.086 | -0.257 | — |
| chr1_966432_G_A | chr1:966432 | -0.073 | -0.071 | -0.257 | — |
| chr1_966468_C_G | chr1:966468 | -0.127 | -0.048 | -0.257 | — |
| chr1_966479_G_A | chr1:966479 | 0.079 | 0.003 | 0.257 | 0.0026% |
| chr1_966437_G_C | chr1:966437 | -0.142 | -0.009 | -0.105 | — |
| chr1_966522_G_C | chr1:966522 | -0.142 | -0.062 | -0.211 | — |
| chr1_966228_G_T | chr1:966228 | 0.139 | 0.060 | -0.152 | — |
| chr1_966230_G_T | chr1:966230 | -0.035 | -0.053 | 0.246 | — |
| chr1_966276_G_C | chr1:966276 | -0.083 | -0.126 | 0.246 | — |
| chr1_966278_T_G | chr1:966278 | 0.015 | -0.008 | 0.246 | — |
| chr1_966363_C_G | chr1:966363 | -0.083 | -0.055 | -0.246 | — |
| chr1_966382_G_T | chr1:966382 | -0.060 | -0.107 | 0.246 | — |
| chr1_966383_G_T | chr1:966383 | -0.015 | -0.098 | 0.246 | — |
| chr1_966395_C_G | chr1:966395 | -0.053 | -0.064 | -0.246 | — |
| chr1_966403_A_C | chr1:966403 | 0.055 | 0.068 | 0.246 | — |
| chr1_966405_A_T | chr1:966405 | 0.139 | 0.058 | 0.246 | — |
| chr1_966477_G_C | chr1:966477 | -0.109 | -0.127 | -0.246 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.