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LPCAT1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LPCAT1
chr5:1,361,426..1,623,960, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1380535_G_A | chr5:1380535 | -1.000 | -0.927 | -1.000 | 0.0026% |
| chr5_1380530_C_T | chr5:1380530 | -1.000 | -0.861 | -1.000 | <0.001% |
| chr5_1380537_G_C | chr5:1380537 | -1.000 | -0.819 | -1.000 | <0.001% |
| chr5_1380537_G_A | chr5:1380537 | -1.000 | -0.812 | -1.000 | 0.0020% |
| chr5_1380532_G_A | chr5:1380532 | -0.957 | -0.666 | -1.000 | 0.0033% |
| chr5_1385928_G_A | chr5:1385928 | -1.000 | -0.157 | -1.000 | 0.0020% |
| chr5_1380574_G_T | chr5:1380574 | -0.641 | -0.433 | -1.000 | 0.0013% |
| chr5_1386436_G_C | chr5:1386436 | -0.726 | -1.000 | -1.000 | 0.0059% |
| chr5_1385963_A_G | chr5:1385963 | -0.973 | -0.419 | -1.000 | 0.0013% |
| chr5_1380575_C_T | chr5:1380575 | -0.507 | -0.297 | -1.000 | 0.015% |
| chr5_1385809_C_T | chr5:1385809 | 0.802 | 0.658 | 1.000 | 0.0013% |
| chr5_1385924_A_T | chr5:1385924 | -0.524 | -0.086 | -1.000 | <0.001% |
| chr5_1386470_C_T | chr5:1386470 | -0.120 | -0.361 | -1.000 | <0.001% |
| chr5_1380508_G_C | chr5:1380508 | -0.402 | -0.299 | -1.000 | <0.001% |
| chr5_1386110_A_G | chr5:1386110 | -0.730 | -0.179 | 0.902 | <0.001% |
| chr5_1386592_C_T | chr5:1386592 | -0.670 | -0.610 | -1.000 | 0.0020% |
| chr5_1380576_C_T | chr5:1380576 | -0.270 | -0.196 | -1.000 | 0.0013% |
| chr5_1380633_G_A | chr5:1380633 | 0.384 | 0.284 | 0.954 | <0.001% |
| chr5_1385935_C_A | chr5:1385935 | -0.313 | 0.096 | -0.941 | 0.0026% |
| chr5_1386644_G_C | chr5:1386644 | -0.573 | -0.508 | -0.739 | <0.001% |
| chr5_1386420_A_G | chr5:1386420 | 0.140 | 0.227 | 0.902 | 0.0013% |
| chr5_1386644_G_T | chr5:1386644 | -0.553 | -0.511 | -0.712 | <0.001% |
| chr5_1386581_G_C | chr5:1386581 | -0.394 | -0.323 | -0.850 | 0.0039% |
| chr5_1385776_C_A | chr5:1385776 | -0.153 | -0.208 | -0.810 | <0.001% |
| chr5_1385995_C_T | chr5:1385995 | -0.087 | -0.185 | -0.797 | <0.001% |
| chr5_1386525_C_A | chr5:1386525 | -0.313 | -0.268 | -0.797 | 0.0020% |
| chr5_1380685_C_G | chr5:1380685 | -0.355 | -0.278 | -0.791 | <0.001% |
| chr5_1385974_G_T | chr5:1385974 | -0.095 | -0.061 | -0.784 | <0.001% |
| chr5_1380519_C_T | chr5:1380519 | -0.278 | -0.179 | -0.771 | 0.014% |
| chr5_1386038_G_A | chr5:1386038 | 0.487 | 0.233 | 0.523 | <0.001% |
| chr5_1386380_G_C | chr5:1386380 | -0.103 | -0.284 | -0.732 | <0.001% |
| chr5_1386486_G_T | chr5:1386486 | -0.227 | -0.153 | -0.706 | 0.0013% |
| chr5_1386643_C_T | chr5:1386643 | -0.443 | -0.444 | -0.647 | <0.001% |
| chr5_1386486_G_A | chr5:1386486 | 0.021 | -0.093 | -0.680 | 0.0033% |
| chr5_1380546_C_G | chr5:1380546 | -0.239 | -0.173 | -0.654 | <0.001% |
| chr5_1380505_C_G | chr5:1380505 | 0.410 | 0.101 | 0.562 | <0.001% |
| chr5_1386558_C_G | chr5:1386558 | -0.406 | -0.208 | -0.379 | 0.0020% |
| chr5_1380606_C_T | chr5:1380606 | 0.221 | 0.093 | 0.641 | 0.0026% |
| chr5_1380614_C_T | chr5:1380614 | -0.268 | -0.155 | -0.641 | 0.012% |
| chr5_1386608_G_T | chr5:1386608 | -0.396 | -0.284 | -0.641 | 0.0026% |
| chr5_1386679_G_A | chr5:1386679 | -0.223 | -0.268 | -0.634 | 0.0059% |
| chr5_1380590_G_A | chr5:1380590 | -0.233 | -0.112 | -0.614 | <0.001% |
| chr5_1386474_C_T | chr5:1386474 | 0.062 | -0.144 | -0.601 | <0.001% |
| chr5_1386628_G_T | chr5:1386628 | -0.351 | -0.262 | -0.601 | 0.0039% |
| chr5_1386493_G_A | chr5:1386493 | -0.212 | -0.326 | -0.588 | 0.0020% |
| chr5_1385960_G_T | chr5:1385960 | -0.243 | -0.125 | -0.575 | 0.0013% |
| chr5_1386597_C_A | chr5:1386597 | 0.058 | 0.064 | 0.562 | <0.001% |
| chr5_1386578_C_G | chr5:1386578 | -0.351 | -0.089 | -0.235 | 0.0072% |
| chr5_1380517_C_G | chr5:1380517 | 0.216 | 0.109 | 0.549 | 0.0046% |
| chr5_1386074_C_A | chr5:1386074 | 0.280 | 0.032 | -0.549 | <0.001% |
| chr5_1380527_C_T | chr5:1380527 | -0.254 | -0.101 | -0.542 | 0.0046% |
| chr5_1385754_C_T | chr5:1385754 | -0.194 | -0.157 | -0.536 | 1.63% |
| chr5_1386346_T_C | chr5:1386346 | 0.111 | 0.086 | 0.536 | 0.0013% |
| chr5_1380520_G_A | chr5:1380520 | -0.256 | -0.109 | -0.529 | <0.001% |
| chr5_1380553_C_T | chr5:1380553 | 0.204 | 0.081 | 0.529 | 0.0026% |
| chr5_1380602_G_A | chr5:1380602 | 0.285 | 0.117 | 0.529 | <0.001% |
| chr5_1380635_C_G | chr5:1380635 | 0.192 | 0.105 | 0.523 | <0.001% |
| chr5_1386495_G_C | chr5:1386495 | -0.328 | -0.224 | -0.523 | 0.014% |
| chr5_1386627_C_G | chr5:1386627 | -0.328 | -0.272 | -0.418 | <0.001% |
| chr5_1380477_G_A | chr5:1380477 | -0.322 | -0.110 | -0.516 | <0.001% |
| chr5_1385798_C_T | chr5:1385798 | 0.324 | 0.163 | 0.261 | <0.001% |
| chr5_1380592_A_G | chr5:1380592 | 0.247 | 0.139 | 0.503 | <0.001% |
| chr5_1386481_T_C | chr5:1386481 | 0.006 | -0.038 | 0.497 | 0.0013% |
| chr5_1380504_C_T | chr5:1380504 | 0.177 | 0.067 | 0.490 | <0.001% |
| chr5_1380494_T_G | chr5:1380494 | -0.045 | -0.110 | -0.484 | <0.001% |
| chr5_1386067_A_T | chr5:1386067 | -0.008 | 0.112 | 0.484 | <0.001% |
| chr5_1380468_C_G | chr5:1380468 | -0.174 | -0.168 | -0.477 | <0.001% |
| chr5_1380555_C_G | chr5:1380555 | -0.161 | -0.050 | -0.477 | <0.001% |
| chr5_1386525_C_T | chr5:1386525 | -0.204 | -0.128 | -0.471 | <0.001% |
| chr5_1385876_T_C | chr5:1385876 | 0.107 | 0.118 | 0.458 | 0.0013% |
| chr5_1385909_C_G | chr5:1385909 | -0.289 | -0.182 | -0.392 | 0.0033% |
| chr5_1386189_G_A | chr5:1386189 | -0.037 | 0.064 | -0.458 | <0.001% |
| chr5_1386515_C_T | chr5:1386515 | -0.216 | -0.198 | -0.458 | <0.001% |
| chr5_1380644_C_T | chr5:1380644 | 0.054 | 0.091 | 0.451 | <0.001% |
| chr5_1380673_G_A | chr5:1380673 | -0.175 | -0.075 | -0.444 | <0.001% |
| chr5_1386017_G_A | chr5:1386017 | 0.280 | 0.153 | 0.288 | 0.011% |
| chr5_1386483_G_A | chr5:1386483 | 0.049 | -0.403 | -0.444 | <0.001% |
| chr5_1386495_G_T | chr5:1386495 | -0.233 | -0.208 | -0.444 | 0.0013% |
| chr5_1386505_G_C | chr5:1386505 | -0.035 | 0.003 | -0.444 | 0.0020% |
| chr5_1380588_C_T | chr5:1380588 | -0.266 | -0.081 | -0.438 | 0.276% |
| chr5_1386487_C_A | chr5:1386487 | -0.037 | -0.022 | -0.431 | 0.0026% |
| chr5_1386563_C_T | chr5:1386563 | 0.054 | -0.006 | -0.431 | <0.001% |
| chr5_1380532_G_C | chr5:1380532 | 0.153 | 0.077 | 0.425 | <0.001% |
| chr5_1385822_G_A | chr5:1385822 | -0.268 | -0.083 | -0.105 | <0.001% |
| chr5_1380472_A_G | chr5:1380472 | -0.126 | -0.136 | -0.418 | 0.0013% |
| chr5_1385906_T_C | chr5:1385906 | -0.264 | -0.227 | -0.157 | <0.001% |
| chr5_1385981_C_A | chr5:1385981 | 0.095 | 0.032 | 0.418 | 0.0046% |
| chr5_1386373_C_A | chr5:1386373 | -0.099 | 0.006 | -0.418 | <0.001% |
| chr5_1386461_G_A | chr5:1386461 | -0.064 | 0.038 | -0.418 | <0.001% |
| chr5_1380511_C_G | chr5:1380511 | 0.206 | 0.078 | 0.412 | 0.0013% |
| chr5_1380702_A_G | chr5:1380702 | 0.190 | 0.133 | 0.412 | 0.0013% |
| chr5_1380464_C_A | chr5:1380464 | 0.162 | 0.046 | 0.405 | 0.0033% |
| chr5_1385864_C_G | chr5:1385864 | -0.144 | -0.118 | -0.405 | <0.001% |
| chr5_1385907_G_A | chr5:1385907 | -0.202 | -0.067 | -0.405 | <0.001% |
| chr5_1385909_C_T | chr5:1385909 | -0.169 | -0.112 | -0.405 | 0.0013% |
| chr5_1386004_G_A | chr5:1386004 | -0.095 | -0.070 | -0.405 | 0.014% |
| chr5_1386477_C_T | chr5:1386477 | -0.008 | -0.019 | 0.405 | 0.0020% |
| chr5_1386503_G_A | chr5:1386503 | -0.151 | -0.185 | -0.405 | <0.001% |
| chr5_1380608_C_T | chr5:1380608 | 0.190 | 0.091 | 0.399 | 0.0013% |
| chr5_1385975_A_T | chr5:1385975 | 0.252 | 0.313 | 0.235 | <0.001% |
| chr5_1385865_G_C | chr5:1385865 | -0.021 | 0.048 | -0.392 | 0.0066% |
| chr5_1386060_C_T | chr5:1386060 | -0.016 | -0.016 | -0.392 | 0.0020% |
| chr5_1380586_A_T | chr5:1380586 | -0.122 | -0.083 | -0.386 | <0.001% |
| chr5_1380521_C_G | chr5:1380521 | -0.091 | -0.083 | -0.379 | 0.0046% |
| chr5_1385961_G_C | chr5:1385961 | -0.181 | -0.102 | -0.379 | <0.001% |
| chr5_1386136_G_T | chr5:1386136 | -0.173 | 0.089 | -0.379 | 0.0013% |
| chr5_1386488_C_T | chr5:1386488 | -0.128 | -0.058 | -0.379 | 0.0033% |
| chr5_1386134_C_T | chr5:1386134 | -0.235 | 0.067 | -0.092 | 0.0020% |
| chr5_1385821_A_C | chr5:1385821 | -0.103 | -0.179 | -0.366 | <0.001% |
| chr5_1385835_C_G | chr5:1385835 | -0.219 | -0.236 | -0.366 | <0.001% |
| chr5_1385880_G_C | chr5:1385880 | 0.206 | 0.073 | 0.366 | 0.0013% |
| chr5_1386026_T_C | chr5:1386026 | 0.231 | 0.022 | 0.092 | 0.014% |
| chr5_1385766_G_A | chr5:1385766 | -0.025 | -0.038 | -0.353 | 0.0026% |
| chr5_1385884_C_G | chr5:1385884 | 0.099 | -0.096 | 0.353 | 0.0013% |
| chr5_1385959_C_A | chr5:1385959 | 0.173 | 0.118 | -0.353 | 0.0013% |
| chr5_1386293_C_A | chr5:1386293 | -0.029 | 0.006 | -0.353 | 0.0013% |
| chr5_1380470_G_A | chr5:1380470 | -0.222 | -0.137 | -0.288 | 0.0020% |
| chr5_1385891_G_C | chr5:1385891 | -0.219 | -0.118 | -0.288 | 0.0026% |
| chr5_1380618_C_T | chr5:1380618 | 0.216 | 0.129 | 0.327 | 0.182% |
| chr5_1386552_C_T | chr5:1386552 | 0.216 | 0.403 | 0.301 | <0.001% |
| chr5_1437566_C_G | chr5:1437566 | 0.123 | 0.013 | 0.343 | <0.001% |
| chr5_1380548_C_G | chr5:1380548 | 0.184 | 0.078 | 0.340 | 0.0020% |
| chr5_1380566_A_G | chr5:1380566 | 0.171 | 0.070 | 0.340 | 0.0020% |
| chr5_1380665_G_C | chr5:1380665 | -0.130 | -0.083 | -0.340 | <0.001% |
| chr5_1385835_C_T | chr5:1385835 | -0.161 | -0.163 | -0.340 | <0.001% |
| chr5_1385855_G_C | chr5:1385855 | 0.173 | 0.144 | 0.340 | 0.0026% |
| chr5_1385870_A_C | chr5:1385870 | 0.214 | 0.102 | 0.288 | <0.001% |
| chr5_1385885_G_T | chr5:1385885 | -0.111 | -0.048 | -0.340 | 0.0033% |
| chr5_1385986_T_C | chr5:1385986 | 0.115 | 0.070 | 0.340 | 0.0026% |
| chr5_1380645_G_A | chr5:1380645 | -0.190 | -0.065 | -0.333 | 0.0039% |
| chr5_1408825_T_C | chr5:1408825 | -0.099 | -0.120 | -0.333 | 0.0026% |
| chr5_1385982_C_G | chr5:1385982 | -0.082 | -0.217 | 0.327 | 0.0013% |
| chr5_1386396_C_G | chr5:1386396 | -0.025 | 0.019 | -0.327 | <0.001% |
| chr5_1386398_C_T | chr5:1386398 | -0.206 | -0.067 | -0.026 | <0.001% |
| chr5_1386559_T_G | chr5:1386559 | -0.206 | -0.198 | -0.248 | <0.001% |
| chr5_1386738_G_T | chr5:1386738 | -0.047 | -0.077 | -0.327 | 0.0020% |
| chr5_1380476_C_T | chr5:1380476 | 0.130 | 0.067 | 0.320 | 0.0020% |
| chr5_1380483_C_T | chr5:1380483 | 0.060 | 0.026 | 0.320 | <0.001% |
| chr5_1380584_G_A | chr5:1380584 | -0.169 | -0.048 | -0.320 | 0.0013% |
| chr5_1408765_G_A | chr5:1408765 | -0.069 | -0.056 | -0.320 | 0.032% |
| chr5_1386639_G_T | chr5:1386639 | 0.200 | 0.236 | 0.248 | <0.001% |
| chr5_1380631_G_C | chr5:1380631 | 0.188 | 0.037 | 0.314 | <0.001% |
| chr5_1385861_G_C | chr5:1385861 | -0.103 | 0.042 | -0.314 | <0.001% |
| chr5_1386156_C_G | chr5:1386156 | -0.107 | 0.003 | -0.314 | 0.017% |
| chr5_1386457_C_G | chr5:1386457 | 0.091 | 0.077 | -0.314 | <0.001% |
| chr5_1380639_G_A | chr5:1380639 | -0.072 | -0.091 | -0.307 | <0.001% |
| chr5_1385855_G_A | chr5:1385855 | -0.186 | -0.112 | -0.288 | <0.001% |
| chr5_1385971_T_C | chr5:1385971 | -0.186 | -0.010 | -0.275 | <0.001% |
| chr5_1437565_G_A | chr5:1437565 | -0.051 | 0.021 | -0.294 | <0.001% |
| chr5_1380487_C_T | chr5:1380487 | -0.184 | -0.097 | -0.288 | 0.0066% |
| chr5_1380201_T_C | chr5:1380201 | 0.103 | 0.118 | 0.288 | 0.0033% |
| chr5_1385955_G_A | chr5:1385955 | 0.099 | 0.137 | 0.288 | 0.0013% |
| chr5_1386020_G_T | chr5:1386020 | 0.181 | -0.006 | 0.000 | 0.018% |
| chr5_1386123_G_A | chr5:1386123 | -0.173 | 0.121 | 0.288 | <0.001% |
| chr5_1386349_C_T | chr5:1386349 | 0.082 | -0.042 | -0.288 | <0.001% |
| chr5_1386390_C_T | chr5:1386390 | -0.181 | -0.176 | -0.157 | <0.001% |
| chr5_1386480_G_A | chr5:1386480 | 0.066 | 0.042 | 0.288 | 0.011% |
| chr5_1408760_C_G | chr5:1408760 | -0.074 | -0.022 | -0.288 | 0.0013% |
| chr5_1380546_C_T | chr5:1380546 | 0.045 | 0.051 | 0.281 | <0.001% |
| chr5_1380603_C_T | chr5:1380603 | 0.103 | 0.054 | 0.281 | <0.001% |
| chr5_1386027_G_T | chr5:1386027 | 0.177 | 0.019 | -0.144 | <0.001% |
| chr5_1386094_C_T | chr5:1386094 | -0.177 | -0.032 | 0.105 | <0.001% |
| chr5_1386291_C_T | chr5:1386291 | 0.177 | -0.022 | -0.144 | <0.001% |
| chr5_1380496_C_T | chr5:1380496 | -0.175 | -0.065 | -0.222 | 0.0013% |
| chr5_1386678_C_T | chr5:1386678 | -0.175 | -0.179 | -0.275 | 0.0013% |
| chr5_1385968_C_T | chr5:1385968 | -0.173 | -0.096 | -0.275 | 0.014% |
| chr5_1386118_G_T | chr5:1386118 | -0.132 | 0.179 | 0.275 | <0.001% |
| chr5_1386154_G_T | chr5:1386154 | -0.115 | 0.093 | -0.275 | <0.001% |
| chr5_1386242_C_T | chr5:1386242 | 0.033 | 0.131 | 0.275 | <0.001% |
| chr5_1386321_C_G | chr5:1386321 | -0.144 | 0.022 | 0.275 | <0.001% |
| chr5_1386492_C_G | chr5:1386492 | -0.173 | 0.089 | -0.222 | <0.001% |
| chr5_1386525_C_G | chr5:1386525 | -0.130 | -0.038 | -0.275 | <0.001% |
| chr5_1380625_G_A | chr5:1380625 | -0.167 | -0.091 | -0.268 | 0.0020% |
| chr5_1386412_C_T | chr5:1386412 | -0.169 | -0.096 | 0.131 | <0.001% |
| chr5_1399873_G_T | chr5:1399873 | -0.085 | 0.019 | -0.268 | <0.001% |
| chr5_1385653_T_C | chr5:1385653 | 0.097 | 0.013 | 0.261 | <0.001% |
| chr5_1385873_G_A | chr5:1385873 | 0.165 | 0.115 | 0.105 | 0.0020% |
| chr5_1386007_C_T | chr5:1386007 | -0.082 | -0.102 | -0.261 | 0.0013% |
| chr5_1386209_C_T | chr5:1386209 | 0.029 | -0.019 | -0.261 | 0.0066% |
| chr5_1380709_A_G | chr5:1380709 | 0.087 | 0.058 | 0.255 | 0.0033% |
| chr5_1386096_C_G | chr5:1386096 | 0.161 | -0.013 | -0.065 | <0.001% |
| chr5_1386718_A_G | chr5:1386718 | 0.109 | 0.121 | 0.255 | 0.0013% |
| chr5_1408749_C_T | chr5:1408749 | -0.047 | -0.030 | -0.255 | <0.001% |
| chr5_1380661_G_C | chr5:1380661 | 0.144 | 0.077 | 0.248 | <0.001% |
| chr5_1380676_G_T | chr5:1380676 | 0.074 | 0.054 | 0.248 | 0.0013% |
| chr5_1385704_T_G | chr5:1385704 | 0.056 | 0.032 | 0.248 | <0.001% |
| chr5_1385964_G_A | chr5:1385964 | -0.012 | -0.073 | -0.248 | 0.0020% |
| chr5_1386153_C_T | chr5:1386153 | 0.025 | 0.003 | -0.248 | <0.001% |
| chr5_1386448_A_G | chr5:1386448 | 0.029 | 0.192 | 0.248 | 0.0072% |
| chr5_1380563_C_A | chr5:1380563 | 0.155 | -0.021 | 0.059 | 0.0013% |
| chr5_1408782_C_T | chr5:1408782 | -0.058 | -0.054 | -0.242 | 0.378% |
| chr5_1380444_C_T | chr5:1380444 | -0.151 | -0.037 | -0.137 | 0.0013% |
| chr5_1380528_G_A | chr5:1380528 | -0.148 | -0.040 | -0.222 | <0.001% |
| chr5_1380580_C_T | chr5:1380580 | -0.095 | -0.062 | -0.235 | <0.001% |
| chr5_1385872_C_T | chr5:1385872 | -0.148 | 0.019 | -0.209 | 0.0013% |
| chr5_1385896_C_T | chr5:1385896 | -0.037 | 0.003 | -0.235 | <0.001% |
| chr5_1386479_C_G | chr5:1386479 | 0.045 | -0.105 | 0.235 | 0.0013% |
| chr5_1386528_G_A | chr5:1386528 | -0.031 | -0.096 | -0.235 | <0.001% |
| chr5_1380325_A_G | chr5:1380325 | -0.091 | -0.048 | -0.229 | 0.0013% |
| chr5_1380543_T_A | chr5:1380543 | -0.144 | -0.045 | -0.229 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.