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LRCOL1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LRCOL1
chr12:132,503,150..132,710,582, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr12_132524442_T_G | chr12:132524442 | 1.000 | 0.965 | 1.000 | — |
| chr12_132524560_G_C | chr12:132524560 | 0.954 | 0.592 | 1.000 | — |
| chr12_132524553_G_A | chr12:132524553 | 0.767 | 0.594 | 0.906 | — |
| chr12_132524518_G_C | chr12:132524518 | -0.500 | -0.436 | -1.000 | — |
| chr12_132524509_C_T | chr12:132524509 | 0.389 | 0.214 | 1.000 | 1.51% |
| chr12_132524521_A_G | chr12:132524521 | -0.568 | -0.416 | -1.000 | — |
| chr12_132524524_C_G | chr12:132524524 | 0.611 | 0.628 | 0.702 | — |
| chr12_132524518_G_A | chr12:132524518 | -0.498 | -0.397 | -1.000 | — |
| chr12_132524520_C_G | chr12:132524520 | -0.474 | -0.369 | -1.000 | — |
| chr12_132524520_C_T | chr12:132524520 | -0.452 | -0.351 | -1.000 | — |
| chr12_132524500_G_C | chr12:132524500 | 0.581 | 0.489 | 0.749 | <0.001% |
| chr12_132524510_G_C | chr12:132524510 | -0.515 | -0.421 | -1.000 | — |
| chr12_132524510_G_T | chr12:132524510 | -0.508 | -0.404 | -0.988 | — |
| chr12_132524512_C_G | chr12:132524512 | -0.447 | -0.348 | -0.982 | — |
| chr12_132524512_C_T | chr12:132524512 | -0.445 | -0.332 | -0.959 | — |
| chr12_132524480_C_A | chr12:132524480 | 0.538 | 0.486 | 0.678 | — |
| chr12_132524520_C_A | chr12:132524520 | -0.422 | -0.266 | -0.942 | — |
| chr12_132524521_A_C | chr12:132524521 | -0.450 | -0.345 | -0.924 | <0.001% |
| chr12_132524503_G_A | chr12:132524503 | 0.515 | 0.545 | 0.708 | 0.049% |
| chr12_132524499_A_G | chr12:132524499 | 0.510 | 0.542 | 0.749 | — |
| chr12_132524512_C_A | chr12:132524512 | -0.412 | -0.309 | -0.889 | — |
| chr12_132524521_A_T | chr12:132524521 | -0.492 | -0.350 | -0.883 | — |
| chr12_132524544_C_A | chr12:132524544 | 0.497 | 0.353 | 0.567 | — |
| chr12_132524505_A_G | chr12:132524505 | -0.488 | -0.463 | -0.766 | — |
| chr12_132524519_C_A | chr12:132524519 | -0.389 | -0.306 | -0.848 | 0.0013% |
| chr12_132524519_C_T | chr12:132524519 | -0.397 | -0.293 | -0.848 | — |
| chr12_132524508_T_G | chr12:132524508 | -0.455 | -0.387 | -0.842 | — |
| chr12_132524449_C_G | chr12:132524449 | 0.470 | 0.327 | 0.596 | — |
| chr12_132524522_G_T | chr12:132524522 | -0.457 | -0.335 | -0.830 | — |
| chr12_132524508_T_A | chr12:132524508 | -0.445 | -0.359 | -0.813 | 0.0026% |
| chr12_132524519_C_G | chr12:132524519 | -0.382 | -0.281 | -0.807 | — |
| chr12_132524541_C_T | chr12:132524541 | 0.285 | 0.092 | 0.807 | <0.001% |
| chr12_132524522_G_C | chr12:132524522 | -0.454 | -0.327 | -0.789 | — |
| chr12_132524511_G_T | chr12:132524511 | -0.406 | -0.300 | -0.789 | — |
| chr12_132524510_G_A | chr12:132524510 | -0.440 | -0.301 | -0.690 | 0.0026% |
| chr12_132524548_A_C | chr12:132524548 | 0.156 | 0.026 | 0.772 | — |
| chr12_132524505_A_T | chr12:132524505 | -0.432 | -0.397 | -0.637 | — |
| chr12_132524527_A_T | chr12:132524527 | 0.432 | 0.297 | 0.456 | — |
| chr12_132524471_G_A | chr12:132524471 | 0.430 | 0.361 | 0.620 | — |
| chr12_132524511_G_C | chr12:132524511 | -0.379 | -0.271 | -0.737 | — |
| chr12_132524511_G_A | chr12:132524511 | -0.386 | -0.282 | -0.725 | — |
| chr12_132524545_A_G | chr12:132524545 | 0.396 | 0.244 | 0.468 | — |
| chr12_132524567_T_C | chr12:132524567 | -0.354 | -0.305 | -0.678 | — |
| chr12_132524508_T_C | chr12:132524508 | -0.382 | -0.309 | -0.602 | <0.001% |
| chr12_132524505_A_C | chr12:132524505 | -0.371 | -0.341 | -0.526 | — |
| chr12_132524562_C_G | chr12:132524562 | 0.371 | 0.208 | 0.468 | <0.001% |
| chr12_132524488_G_A | chr12:132524488 | 0.364 | 0.307 | 0.456 | — |
| chr12_132524489_C_T | chr12:132524489 | -0.361 | -0.307 | -0.620 | — |
| chr12_132524529_G_T | chr12:132524529 | 0.354 | 0.330 | 0.357 | — |
| chr12_132524513_A_G | chr12:132524513 | -0.328 | -0.261 | -0.620 | — |
| chr12_132524494_G_T | chr12:132524494 | -0.349 | -0.209 | -0.491 | — |
| chr12_132524518_G_T | chr12:132524518 | -0.257 | -0.230 | -0.591 | — |
| chr12_132524558_G_T | chr12:132524558 | 0.328 | 0.144 | 0.099 | — |
| chr12_132524485_C_G | chr12:132524485 | -0.298 | -0.214 | -0.567 | — |
| chr12_132524504_A_T | chr12:132524504 | -0.316 | -0.278 | -0.439 | — |
| chr12_132524527_A_C | chr12:132524527 | 0.316 | 0.230 | 0.439 | — |
| chr12_132524502_C_G | chr12:132524502 | -0.315 | -0.242 | -0.363 | — |
| chr12_132524494_G_C | chr12:132524494 | -0.313 | -0.189 | -0.386 | — |
| chr12_132524566_T_A | chr12:132524566 | 0.313 | 0.118 | 0.392 | — |
| chr12_132524492_C_A | chr12:132524492 | -0.310 | -0.248 | -0.480 | — |
| chr12_132524538_G_C | chr12:132524538 | 0.310 | 0.194 | 0.409 | — |
| chr12_132524531_C_A | chr12:132524531 | -0.250 | -0.178 | -0.532 | — |
| chr12_132524486_G_T | chr12:132524486 | 0.283 | 0.199 | 0.374 | — |
| chr12_132524559_G_T | chr12:132524559 | 0.238 | 0.230 | 0.497 | — |
| chr12_132524489_C_G | chr12:132524489 | -0.278 | -0.237 | -0.468 | — |
| chr12_132524567_T_A | chr12:132524567 | -0.270 | -0.225 | -0.491 | — |
| chr12_132524560_G_A | chr12:132524560 | 0.276 | 0.202 | 0.398 | — |
| chr12_132524478_C_G | chr12:132524478 | 0.275 | 0.161 | 0.257 | — |
| chr12_132524566_T_G | chr12:132524566 | -0.230 | -0.238 | -0.485 | — |
| chr12_132524506_G_C | chr12:132524506 | -0.273 | -0.238 | -0.433 | — |
| chr12_132524456_A_G | chr12:132524456 | -0.235 | -0.186 | -0.468 | — |
| chr12_132524524_C_T | chr12:132524524 | 0.265 | 0.246 | 0.351 | — |
| chr12_132524556_C_A | chr12:132524556 | 0.260 | 0.224 | 0.427 | — |
| chr12_132524504_A_G | chr12:132524504 | -0.258 | -0.227 | -0.287 | — |
| chr12_132524561_A_C | chr12:132524561 | 0.257 | 0.117 | 0.187 | — |
| chr12_132524526_C_A | chr12:132524526 | -0.255 | -0.170 | -0.287 | — |
| chr12_132524578_G_A | chr12:132524578 | 0.048 | 0.028 | 0.439 | — |
| chr12_132524494_G_A | chr12:132524494 | -0.245 | -0.174 | -0.409 | — |
| chr12_132524506_G_T | chr12:132524506 | -0.245 | -0.184 | -0.240 | — |
| chr12_132524517_A_C | chr12:132524517 | 0.245 | 0.204 | 0.345 | — |
| chr12_132524556_C_T | chr12:132524556 | -0.185 | -0.161 | -0.433 | — |
| chr12_132524562_C_T | chr12:132524562 | -0.243 | -0.205 | -0.339 | <0.001% |
| chr12_132524537_C_G | chr12:132524537 | -0.242 | -0.110 | -0.228 | — |
| chr12_132524502_C_A | chr12:132524502 | -0.238 | -0.196 | -0.292 | — |
| chr12_132524509_C_A | chr12:132524509 | -0.235 | -0.203 | -0.374 | — |
| chr12_132524568_T_G | chr12:132524568 | 0.031 | 0.031 | 0.415 | <0.001% |
| chr12_132524485_C_T | chr12:132524485 | -0.225 | -0.203 | -0.409 | 0.0013% |
| chr12_132524501_C_A | chr12:132524501 | -0.227 | -0.200 | -0.409 | — |
| chr12_132524507_G_A | chr12:132524507 | -0.224 | -0.169 | -0.409 | — |
| chr12_132524513_A_C | chr12:132524513 | -0.192 | -0.184 | -0.409 | — |
| chr12_132524529_G_A | chr12:132524529 | 0.222 | 0.160 | 0.140 | — |
| chr12_132524473_A_G | chr12:132524473 | -0.220 | -0.176 | -0.327 | — |
| chr12_132524540_G_C | chr12:132524540 | -0.217 | -0.132 | -0.281 | — |
| chr12_132524471_G_C | chr12:132524471 | 0.215 | 0.128 | 0.374 | — |
| chr12_132524495_G_T | chr12:132524495 | -0.215 | -0.166 | -0.333 | — |
| chr12_132524499_A_T | chr12:132524499 | 0.215 | 0.242 | 0.351 | — |
| chr12_132524501_C_T | chr12:132524501 | 0.215 | 0.181 | 0.199 | — |
| chr12_132524507_G_C | chr12:132524507 | -0.215 | -0.121 | -0.105 | — |
| chr12_132524543_A_C | chr12:132524543 | -0.214 | -0.149 | -0.380 | — |
| chr12_132524530_G_A | chr12:132524530 | 0.214 | 0.183 | 0.269 | — |
| chr12_132524483_A_G | chr12:132524483 | 0.137 | 0.161 | 0.374 | — |
| chr12_132524525_T_A | chr12:132524525 | 0.212 | 0.161 | 0.269 | — |
| chr12_132524488_G_C | chr12:132524488 | 0.209 | 0.166 | 0.304 | — |
| chr12_132524506_G_A | chr12:132524506 | -0.209 | -0.128 | -0.082 | — |
| chr12_132524477_G_A | chr12:132524477 | 0.204 | 0.152 | 0.187 | — |
| chr12_132524523_G_T | chr12:132524523 | -0.147 | -0.108 | -0.357 | — |
| chr12_132524504_A_C | chr12:132524504 | -0.200 | -0.185 | -0.158 | — |
| chr12_132524517_A_G | chr12:132524517 | -0.200 | -0.113 | -0.316 | — |
| chr12_132524445_G_C | chr12:132524445 | -0.184 | -0.179 | -0.351 | — |
| chr12_132524493_T_C | chr12:132524493 | -0.199 | -0.139 | -0.269 | — |
| chr12_132524536_G_T | chr12:132524536 | -0.164 | -0.116 | -0.351 | — |
| chr12_132524474_G_A | chr12:132524474 | 0.020 | 0.060 | 0.339 | — |
| chr12_132524477_G_T | chr12:132524477 | 0.192 | 0.157 | 0.187 | — |
| chr12_132524490_C_T | chr12:132524490 | -0.192 | -0.156 | -0.281 | — |
| chr12_132524493_T_G | chr12:132524493 | -0.190 | -0.164 | -0.269 | — |
| chr12_132524580_G_C | chr12:132524580 | 0.190 | 0.156 | 0.246 | — |
| chr12_132524571_C_A | chr12:132524571 | -0.084 | -0.039 | -0.333 | — |
| chr12_132524490_C_G | chr12:132524490 | -0.187 | -0.134 | -0.211 | — |
| chr12_132524526_C_T | chr12:132524526 | -0.185 | -0.132 | -0.251 | <0.001% |
| chr12_132524490_C_A | chr12:132524490 | -0.184 | -0.147 | -0.246 | — |
| chr12_132524577_T_G | chr12:132524577 | 0.182 | 0.239 | 0.111 | — |
| chr12_132524492_C_G | chr12:132524492 | -0.179 | -0.152 | -0.164 | — |
| chr12_132524493_T_A | chr12:132524493 | -0.179 | -0.145 | -0.234 | — |
| chr12_132524448_A_C | chr12:132524448 | -0.175 | -0.136 | -0.304 | — |
| chr12_132524487_G_T | chr12:132524487 | 0.175 | 0.145 | 0.304 | — |
| chr12_132524513_A_T | chr12:132524513 | -0.141 | -0.121 | -0.310 | — |
| chr12_132524527_A_G | chr12:132524527 | 0.141 | 0.103 | 0.310 | — |
| chr12_132524544_C_G | chr12:132524544 | 0.175 | 0.107 | 0.228 | — |
| chr12_132524457_G_T | chr12:132524457 | -0.161 | -0.166 | -0.304 | — |
| chr12_132524472_G_C | chr12:132524472 | -0.171 | -0.093 | -0.304 | — |
| chr12_132524478_C_T | chr12:132524478 | 0.172 | 0.120 | 0.152 | — |
| chr12_132524498_G_T | chr12:132524498 | -0.172 | -0.147 | -0.234 | — |
| chr12_132524546_C_G | chr12:132524546 | 0.171 | 0.097 | 0.234 | 0.0013% |
| chr12_132524491_T_C | chr12:132524491 | -0.169 | -0.127 | -0.269 | — |
| chr12_132524495_G_C | chr12:132524495 | -0.169 | -0.123 | -0.298 | — |
| chr12_132524552_A_G | chr12:132524552 | -0.132 | -0.096 | -0.298 | <0.001% |
| chr12_132524463_T_A | chr12:132524463 | -0.154 | -0.130 | -0.292 | — |
| chr12_132524473_A_C | chr12:132524473 | 0.129 | 0.103 | 0.292 | — |
| chr12_132524503_G_T | chr12:132524503 | -0.166 | -0.146 | -0.222 | — |
| chr12_132524516_G_T | chr12:132524516 | -0.093 | -0.084 | -0.292 | — |
| chr12_132524517_A_T | chr12:132524517 | 0.139 | 0.190 | 0.292 | — |
| chr12_132524554_T_G | chr12:132524554 | 0.139 | 0.058 | 0.287 | — |
| chr12_132524438_C_T | chr12:132524438 | 0.137 | 0.118 | 0.281 | <0.001% |
| chr12_132524469_C_A | chr12:132524469 | -0.126 | -0.117 | -0.281 | — |
| chr12_132524497_T_A | chr12:132524497 | 0.159 | 0.147 | 0.222 | — |
| chr12_132524564_G_A | chr12:132524564 | -0.157 | -0.142 | -0.187 | — |
| chr12_132524509_C_G | chr12:132524509 | 0.071 | 0.028 | 0.275 | — |
| chr12_132524453_G_A | chr12:132524453 | -0.094 | -0.110 | -0.269 | — |
| chr12_132524462_G_T | chr12:132524462 | -0.152 | -0.123 | -0.257 | — |
| chr12_132524534_C_G | chr12:132524534 | 0.152 | 0.099 | 0.146 | — |
| chr12_132524486_G_C | chr12:132524486 | 0.151 | 0.097 | 0.175 | — |
| chr12_132524499_A_C | chr12:132524499 | -0.149 | -0.132 | -0.152 | — |
| chr12_132524500_G_A | chr12:132524500 | 0.147 | 0.136 | 0.140 | — |
| chr12_132524501_C_G | chr12:132524501 | -0.147 | -0.135 | -0.257 | — |
| chr12_132524549_G_T | chr12:132524549 | -0.147 | -0.108 | -0.251 | — |
| chr12_132524552_A_C | chr12:132524552 | -0.147 | -0.096 | -0.234 | — |
| chr12_132524565_G_T | chr12:132524565 | -0.147 | -0.162 | -0.246 | — |
| chr12_132524401_C_A | chr12:132524401 | 0.083 | 0.081 | 0.257 | — |
| chr12_132524409_C_G | chr12:132524409 | 0.127 | 0.144 | 0.257 | — |
| chr12_132524434_G_A | chr12:132524434 | 0.131 | 0.116 | 0.257 | — |
| chr12_132524538_G_T | chr12:132524538 | 0.141 | 0.086 | 0.257 | — |
| chr12_132524495_G_A | chr12:132524495 | -0.141 | -0.101 | -0.216 | — |
| chr12_132524438_C_A | chr12:132524438 | 0.109 | 0.101 | 0.246 | — |
| chr12_132524440_T_C | chr12:132524440 | -0.132 | -0.120 | -0.246 | — |
| chr12_132524496_C_A | chr12:132524496 | -0.129 | -0.076 | -0.246 | — |
| chr12_132524496_C_T | chr12:132524496 | -0.127 | -0.089 | -0.246 | — |
| chr12_132524551_C_G | chr12:132524551 | -0.139 | -0.081 | -0.234 | — |
| chr12_132524436_A_C | chr12:132524436 | -0.137 | -0.142 | -0.234 | — |
| chr12_132524497_T_C | chr12:132524497 | 0.137 | 0.082 | 0.175 | <0.001% |
| chr12_132524555_C_T | chr12:132524555 | 0.137 | 0.086 | 0.170 | — |
| chr12_132524516_G_C | chr12:132524516 | 0.136 | 0.059 | 0.000 | — |
| chr12_132524536_G_C | chr12:132524536 | -0.124 | -0.065 | -0.240 | — |
| chr12_132524570_C_T | chr12:132524570 | -0.136 | -0.102 | -0.222 | <0.001% |
| chr12_132524449_C_A | chr12:132524449 | 0.134 | 0.065 | 0.117 | — |
| chr12_132524484_G_T | chr12:132524484 | 0.134 | 0.083 | 0.117 | — |
| chr12_132524563_G_C | chr12:132524563 | -0.134 | -0.063 | -0.135 | — |
| chr12_132524564_G_T | chr12:132524564 | -0.134 | -0.113 | -0.041 | — |
| chr12_132524455_G_T | chr12:132524455 | -0.119 | -0.092 | -0.234 | — |
| chr12_132524464_T_A | chr12:132524464 | -0.126 | -0.072 | -0.234 | — |
| chr12_132524553_G_T | chr12:132524553 | -0.132 | -0.076 | -0.064 | — |
| chr12_132524567_T_G | chr12:132524567 | -0.132 | -0.131 | -0.117 | — |
| chr12_132524551_C_A | chr12:132524551 | -0.127 | -0.052 | -0.187 | — |
| chr12_132524487_G_C | chr12:132524487 | 0.063 | 0.079 | 0.222 | — |
| chr12_132524466_C_A | chr12:132524466 | -0.124 | -0.087 | -0.211 | — |
| chr12_132524528_T_G | chr12:132524528 | 0.123 | 0.078 | 0.094 | — |
| chr12_132524569_C_A | chr12:132524569 | -0.123 | -0.059 | -0.164 | — |
| chr12_132524393_G_C | chr12:132524393 | 0.096 | 0.088 | 0.211 | — |
| chr12_132524475_G_A | chr12:132524475 | -0.070 | -0.089 | -0.211 | 0.0072% |
| chr12_132524574_G_A | chr12:132524574 | -0.118 | -0.073 | -0.211 | — |
| chr12_132524464_T_G | chr12:132524464 | -0.118 | -0.096 | -0.164 | — |
| chr12_132524514_G_C | chr12:132524514 | 0.111 | 0.067 | 0.205 | — |
| chr12_132524572_C_G | chr12:132524572 | -0.116 | -0.074 | -0.129 | — |
| chr12_132524462_G_C | chr12:132524462 | -0.114 | -0.092 | -0.164 | <0.001% |
| chr12_132524507_G_T | chr12:132524507 | -0.114 | -0.106 | -0.199 | — |
| chr12_132524403_T_G | chr12:132524403 | 0.099 | 0.076 | 0.199 | — |
| chr12_132524437_C_G | chr12:132524437 | 0.081 | 0.065 | 0.199 | — |
| chr12_132524455_G_C | chr12:132524455 | 0.113 | 0.057 | 0.140 | — |
| chr12_132524476_T_G | chr12:132524476 | -0.093 | -0.091 | -0.199 | — |
| chr12_132524571_C_T | chr12:132524571 | -0.103 | -0.086 | -0.199 | — |
| chr12_132524572_C_T | chr12:132524572 | -0.113 | -0.082 | -0.140 | 0.0013% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.