Home / Gene
LRRC46
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LRRC46
chr17:47,731,669..47,937,718, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_47841361_C_T | chr17:47841361 | -1.000 | -0.259 | -1.000 | — |
| chr17_47841365_A_C | chr17:47841365 | -1.000 | -0.290 | -1.000 | — |
| chr17_47841361_C_G | chr17:47841361 | -1.000 | -0.239 | -1.000 | — |
| chr17_47841361_C_A | chr17:47841361 | -1.000 | -0.151 | -1.000 | — |
| chr17_47841366_G_A | chr17:47841366 | -1.000 | -0.514 | -1.000 | — |
| chr17_47841367_G_C | chr17:47841367 | -1.000 | 0.055 | -1.000 | — |
| chr17_47841362_A_C | chr17:47841362 | -1.000 | 0.020 | -1.000 | — |
| chr17_47841360_C_T | chr17:47841360 | -1.000 | -0.028 | -0.876 | — |
| chr17_47841366_G_C | chr17:47841366 | -1.000 | -0.292 | -1.000 | — |
| chr17_47841365_A_T | chr17:47841365 | -1.000 | 0.020 | -1.000 | — |
| chr17_47841366_G_T | chr17:47841366 | -1.000 | -0.060 | -1.000 | — |
| chr17_47841360_C_G | chr17:47841360 | -1.000 | 0.068 | -0.798 | — |
| chr17_47841367_G_T | chr17:47841367 | -1.000 | 0.315 | -0.281 | — |
| chr17_47841365_A_G | chr17:47841365 | -1.000 | 0.091 | -0.360 | — |
| chr17_47841372_G_C | chr17:47841372 | -1.000 | 0.207 | -0.292 | — |
| chr17_47841363_C_T | chr17:47841363 | -1.000 | 0.091 | -0.169 | — |
| chr17_47841283_C_G | chr17:47841283 | -1.000 | -0.814 | -1.000 | — |
| chr17_47841368_G_C | chr17:47841368 | -1.000 | 0.136 | -0.393 | — |
| chr17_47841344_G_C | chr17:47841344 | -1.000 | -0.126 | -0.921 | — |
| chr17_47841345_C_G | chr17:47841345 | -1.000 | 0.086 | -0.573 | — |
| chr17_47841372_G_T | chr17:47841372 | -1.000 | 0.191 | -0.236 | — |
| chr17_47841360_C_A | chr17:47841360 | -1.000 | 0.055 | -0.461 | — |
| chr17_47841290_T_C | chr17:47841290 | -1.000 | -0.559 | -1.000 | — |
| chr17_47841309_C_A | chr17:47841309 | 1.000 | 0.796 | 0.416 | — |
| chr17_47841371_C_G | chr17:47841371 | -1.000 | 0.234 | -0.090 | 0.0020% |
| chr17_47841344_G_T | chr17:47841344 | -1.000 | -0.156 | -0.775 | — |
| chr17_47841363_C_A | chr17:47841363 | -1.000 | 0.065 | -0.258 | — |
| chr17_47841222_A_T | chr17:47841222 | 1.000 | 0.972 | 0.528 | — |
| chr17_47841370_G_C | chr17:47841370 | -1.000 | 0.181 | -0.393 | — |
| chr17_47841223_G_C | chr17:47841223 | 0.948 | 0.640 | 0.629 | — |
| chr17_47841223_G_T | chr17:47841223 | 0.925 | 0.572 | 0.539 | — |
| chr17_47841280_G_C | chr17:47841280 | -0.898 | -0.730 | -1.000 | — |
| chr17_47841281_G_T | chr17:47841281 | -0.895 | -0.650 | -1.000 | — |
| chr17_47841281_G_A | chr17:47841281 | -0.885 | -0.736 | -1.000 | — |
| chr17_47841368_G_A | chr17:47841368 | -0.872 | 0.020 | -0.449 | — |
| chr17_47841300_C_G | chr17:47841300 | -0.725 | -0.804 | -1.000 | — |
| chr17_47841417_C_G | chr17:47841417 | 0.343 | -0.131 | 1.000 | — |
| chr17_47841364_C_G | chr17:47841364 | -0.841 | 0.010 | -0.292 | — |
| chr17_47841272_G_C | chr17:47841272 | -0.830 | -0.423 | -0.876 | — |
| chr17_47841362_A_T | chr17:47841362 | -0.825 | -0.033 | -0.438 | — |
| chr17_47841281_G_C | chr17:47841281 | -0.803 | -0.647 | -0.978 | — |
| chr17_47841298_G_A | chr17:47841298 | -0.616 | -0.753 | -1.000 | — |
| chr17_47841344_G_A | chr17:47841344 | -0.800 | 0.005 | -0.584 | 0.0033% |
| chr17_47841280_G_T | chr17:47841280 | -0.790 | -0.730 | -1.000 | — |
| chr17_47841224_A_T | chr17:47841224 | 0.780 | 0.463 | 0.315 | <0.001% |
| chr17_47841298_G_T | chr17:47841298 | -0.443 | -0.660 | -1.000 | — |
| chr17_47841372_G_A | chr17:47841372 | -0.759 | 0.159 | -0.315 | <0.001% |
| chr17_47841284_G_T | chr17:47841284 | -0.757 | -0.625 | -1.000 | — |
| chr17_47841299_A_T | chr17:47841299 | -0.626 | -0.723 | -1.000 | — |
| chr17_47841224_A_G | chr17:47841224 | 0.751 | 0.519 | 0.461 | — |
| chr17_47841225_C_G | chr17:47841225 | 0.751 | 0.453 | 0.438 | — |
| chr17_47841223_G_A | chr17:47841223 | 0.741 | 0.489 | 0.528 | <0.001% |
| chr17_47841299_A_C | chr17:47841299 | -0.741 | -0.725 | -1.000 | — |
| chr17_47841302_T_C | chr17:47841302 | -0.230 | 0.292 | 1.000 | — |
| chr17_47841299_A_G | chr17:47841299 | -0.718 | -0.809 | -1.000 | — |
| chr17_47841270_C_T | chr17:47841270 | -0.695 | -0.474 | -0.944 | — |
| chr17_47841308_G_A | chr17:47841308 | 0.689 | 0.950 | 0.213 | — |
| chr17_47841297_T_G | chr17:47841297 | -0.685 | -0.793 | -0.820 | — |
| chr17_47841297_T_A | chr17:47841297 | -0.675 | -0.821 | -0.865 | — |
| chr17_47841225_C_T | chr17:47841225 | 0.669 | 0.275 | 0.315 | — |
| chr17_47841300_C_A | chr17:47841300 | -0.525 | -0.620 | -1.000 | — |
| chr17_47841284_G_A | chr17:47841284 | -0.639 | -0.474 | -0.753 | — |
| chr17_47841370_G_A | chr17:47841370 | -0.634 | 0.272 | -0.191 | — |
| chr17_47841298_G_C | chr17:47841298 | -0.367 | -0.395 | -1.000 | — |
| chr17_47841285_G_A | chr17:47841285 | -0.626 | -0.479 | -0.955 | <0.001% |
| chr17_47841225_C_A | chr17:47841225 | 0.623 | 0.317 | 0.303 | — |
| chr17_47841284_G_C | chr17:47841284 | -0.613 | -0.441 | -0.562 | — |
| chr17_47841368_G_T | chr17:47841368 | -0.607 | 0.068 | -0.472 | — |
| chr17_47841285_G_C | chr17:47841285 | -0.605 | -0.509 | -0.843 | — |
| chr17_47841270_C_G | chr17:47841270 | -0.590 | -0.448 | -0.820 | — |
| chr17_47841283_C_A | chr17:47841283 | -0.518 | -0.433 | -1.000 | — |
| chr17_47841280_G_A | chr17:47841280 | -0.587 | -0.514 | -0.787 | <0.001% |
| chr17_47841226_C_G | chr17:47841226 | 0.582 | 0.338 | 0.461 | — |
| chr17_47841279_T_C | chr17:47841279 | -0.577 | -0.506 | -0.966 | — |
| chr17_47841226_C_T | chr17:47841226 | 0.569 | 0.244 | 0.180 | — |
| chr17_47841373_C_A | chr17:47841373 | -0.562 | 0.121 | -0.090 | — |
| chr17_47841247_A_C | chr17:47841247 | -0.561 | -0.232 | -0.438 | — |
| chr17_47841227_C_G | chr17:47841227 | 0.557 | 0.229 | 0.270 | — |
| chr17_47841226_C_A | chr17:47841226 | 0.556 | 0.275 | 0.180 | — |
| chr17_47841227_C_T | chr17:47841227 | 0.525 | 0.267 | 0.202 | — |
| chr17_47841228_C_A | chr17:47841228 | 0.525 | 0.322 | 0.225 | — |
| chr17_47841371_C_T | chr17:47841371 | -0.525 | 0.126 | -0.202 | — |
| chr17_47841297_T_C | chr17:47841297 | -0.518 | -0.650 | -0.573 | — |
| chr17_47841228_C_G | chr17:47841228 | 0.515 | 0.327 | 0.416 | — |
| chr17_47841422_T_C | chr17:47841422 | -0.515 | 0.058 | -0.034 | — |
| chr17_47841303_G_T | chr17:47841303 | -0.508 | -0.219 | -0.494 | — |
| chr17_47841345_C_A | chr17:47841345 | -0.505 | 0.083 | -0.371 | <0.001% |
| chr17_47841306_A_T | chr17:47841306 | 0.502 | 0.453 | 0.056 | — |
| chr17_47841294_A_G | chr17:47841294 | -0.498 | -0.348 | -0.236 | — |
| chr17_47841381_C_G | chr17:47841381 | -0.487 | 0.063 | 0.022 | — |
| chr17_47841399_C_G | chr17:47841399 | -0.484 | -0.018 | -0.180 | — |
| chr17_47841295_G_A | chr17:47841295 | -0.482 | -0.393 | -0.404 | — |
| chr17_47841416_C_A | chr17:47841416 | 0.482 | 0.010 | 0.202 | — |
| chr17_47841303_G_C | chr17:47841303 | -0.220 | -0.295 | -0.820 | — |
| chr17_47841313_C_T | chr17:47841313 | 0.475 | 0.489 | 0.101 | — |
| chr17_47841416_C_G | chr17:47841416 | 0.475 | -0.053 | 0.090 | — |
| chr17_47841287_G_A | chr17:47841287 | -0.472 | -0.204 | -0.315 | — |
| chr17_47841315_G_A | chr17:47841315 | 0.472 | 0.668 | 0.247 | — |
| chr17_47841441_C_G | chr17:47841441 | 0.395 | 0.068 | 0.809 | — |
| chr17_47841252_C_T | chr17:47841252 | 0.059 | 0.330 | 0.775 | — |
| chr17_47841243_T_G | chr17:47841243 | -0.449 | -0.174 | -0.213 | — |
| chr17_47841282_G_C | chr17:47841282 | -0.449 | -0.169 | -0.022 | — |
| chr17_47841383_A_C | chr17:47841383 | -0.444 | 0.108 | -0.056 | — |
| chr17_47841287_G_C | chr17:47841287 | -0.443 | -0.272 | -0.618 | — |
| chr17_47841287_G_T | chr17:47841287 | -0.377 | -0.290 | -0.753 | — |
| chr17_47841348_C_T | chr17:47841348 | 0.031 | 0.108 | 0.753 | — |
| chr17_47841389_C_G | chr17:47841389 | -0.439 | 0.209 | 0.562 | — |
| chr17_47841417_C_A | chr17:47841417 | 0.338 | -0.146 | 0.753 | <0.001% |
| chr17_47841294_A_C | chr17:47841294 | -0.433 | -0.340 | -0.326 | — |
| chr17_47841440_G_C | chr17:47841440 | -0.430 | -0.050 | -0.281 | — |
| chr17_47841292_T_A | chr17:47841292 | 0.020 | -0.118 | -0.730 | — |
| chr17_47841409_A_G | chr17:47841409 | -0.425 | -0.093 | -0.169 | — |
| chr17_47841283_C_T | chr17:47841283 | -0.423 | -0.272 | -0.697 | — |
| chr17_47841371_C_A | chr17:47841371 | -0.423 | 0.131 | -0.270 | — |
| chr17_47841324_T_G | chr17:47841324 | 0.234 | -0.146 | 0.719 | — |
| chr17_47841343_T_G | chr17:47841343 | -0.410 | 0.065 | -0.360 | — |
| chr17_47841351_C_G | chr17:47841351 | -0.407 | 0.116 | -0.292 | — |
| chr17_47841285_G_T | chr17:47841285 | -0.393 | -0.350 | -0.652 | — |
| chr17_47841288_A_G | chr17:47841288 | -0.393 | -0.267 | -0.247 | <0.001% |
| chr17_47841227_C_A | chr17:47841227 | 0.390 | 0.149 | 0.079 | — |
| chr17_47841246_C_G | chr17:47841246 | -0.387 | -0.136 | 0.067 | — |
| chr17_47841261_T_C | chr17:47841261 | 0.334 | 0.448 | 0.663 | — |
| chr17_47841275_C_A | chr17:47841275 | -0.387 | -0.295 | -0.292 | — |
| chr17_47841326_G_C | chr17:47841326 | -0.387 | -0.270 | -0.258 | — |
| chr17_47841272_G_A | chr17:47841272 | -0.384 | -0.254 | -0.494 | — |
| chr17_47841272_G_T | chr17:47841272 | -0.380 | -0.224 | -0.449 | — |
| chr17_47841282_G_A | chr17:47841282 | -0.380 | -0.242 | -0.247 | — |
| chr17_47841282_G_T | chr17:47841282 | -0.380 | -0.081 | 0.112 | — |
| chr17_47841293_C_T | chr17:47841293 | -0.311 | -0.315 | -0.652 | — |
| chr17_47841316_C_G | chr17:47841316 | -0.380 | -0.280 | -0.202 | — |
| chr17_47841415_A_C | chr17:47841415 | -0.370 | -0.045 | 0.124 | — |
| chr17_47841414_C_G | chr17:47841414 | 0.369 | 0.134 | 0.506 | — |
| chr17_47841431_T_C | chr17:47841431 | -0.369 | -0.003 | -0.011 | — |
| chr17_47841204_T_C | chr17:47841204 | -0.213 | -0.184 | -0.629 | <0.001% |
| chr17_47841240_G_A | chr17:47841240 | -0.144 | -0.118 | -0.629 | — |
| chr17_47841373_C_G | chr17:47841373 | -0.366 | 0.063 | -0.034 | — |
| chr17_47841275_C_G | chr17:47841275 | -0.364 | -0.325 | -0.483 | — |
| chr17_47841293_C_A | chr17:47841293 | -0.364 | -0.307 | -0.584 | — |
| chr17_47841370_G_T | chr17:47841370 | -0.364 | 0.098 | -0.270 | — |
| chr17_47841302_T_A | chr17:47841302 | -0.361 | -0.101 | 0.472 | — |
| chr17_47841414_C_A | chr17:47841414 | 0.361 | 0.018 | 0.202 | — |
| chr17_47841268_G_C | chr17:47841268 | 0.354 | 0.202 | 0.483 | — |
| chr17_47841271_C_T | chr17:47841271 | -0.305 | -0.290 | -0.607 | — |
| chr17_47841289_C_A | chr17:47841289 | -0.338 | -0.290 | -0.607 | — |
| chr17_47841294_A_T | chr17:47841294 | -0.354 | -0.282 | -0.202 | — |
| chr17_47841321_G_T | chr17:47841321 | 0.138 | -0.234 | 0.607 | — |
| chr17_47841306_A_C | chr17:47841306 | 0.351 | 0.247 | 0.146 | — |
| chr17_47841293_C_G | chr17:47841293 | -0.285 | -0.295 | -0.596 | — |
| chr17_47841343_T_A | chr17:47841343 | -0.348 | 0.154 | -0.337 | — |
| chr17_47841286_A_C | chr17:47841286 | -0.344 | -0.232 | -0.281 | — |
| chr17_47841381_C_A | chr17:47841381 | -0.344 | 0.065 | 0.011 | — |
| chr17_47841249_C_G | chr17:47841249 | 0.052 | 0.219 | 0.584 | — |
| chr17_47841463_C_A | chr17:47841463 | -0.128 | -0.141 | -0.584 | — |
| chr17_47841220_C_G | chr17:47841220 | -0.133 | -0.207 | -0.573 | — |
| chr17_47841323_G_T | chr17:47841323 | -0.331 | -0.317 | -0.393 | — |
| chr17_47841237_C_T | chr17:47841237 | 0.138 | 0.305 | 0.562 | — |
| chr17_47841334_A_T | chr17:47841334 | 0.118 | -0.174 | -0.562 | — |
| chr17_47841359_T_C | chr17:47841359 | -0.328 | -0.015 | -0.157 | — |
| chr17_47841279_T_A | chr17:47841279 | -0.266 | -0.254 | -0.551 | — |
| chr17_47841306_A_G | chr17:47841306 | -0.321 | -0.239 | -0.303 | — |
| chr17_47841310_C_T | chr17:47841310 | -0.321 | -0.267 | 0.045 | — |
| chr17_47841232_T_C | chr17:47841232 | -0.318 | -0.214 | -0.348 | — |
| chr17_47841286_A_T | chr17:47841286 | -0.318 | -0.191 | -0.371 | — |
| chr17_47841271_C_A | chr17:47841271 | -0.305 | -0.267 | -0.539 | — |
| chr17_47841317_C_G | chr17:47841317 | -0.315 | -0.307 | -0.292 | — |
| chr17_47841369_C_G | chr17:47841369 | 0.103 | 0.144 | 0.539 | — |
| chr17_47841326_G_A | chr17:47841326 | 0.308 | 0.330 | 0.124 | — |
| chr17_47841336_C_G | chr17:47841336 | -0.154 | 0.106 | 0.528 | — |
| chr17_47841221_A_C | chr17:47841221 | 0.305 | 0.257 | 0.169 | — |
| chr17_47841352_G_C | chr17:47841352 | -0.305 | -0.050 | -0.270 | — |
| chr17_47841377_T_C | chr17:47841377 | -0.305 | 0.139 | 0.079 | — |
| chr17_47841310_C_G | chr17:47841310 | -0.302 | -0.282 | 0.090 | — |
| chr17_47841346_A_C | chr17:47841346 | -0.302 | 0.063 | -0.292 | — |
| chr17_47841413_C_A | chr17:47841413 | 0.298 | 0.040 | 0.045 | <0.001% |
| chr17_47841249_C_A | chr17:47841249 | -0.257 | -0.234 | -0.506 | — |
| chr17_47841295_G_C | chr17:47841295 | -0.295 | -0.411 | 0.449 | — |
| chr17_47841269_G_A | chr17:47841269 | 0.289 | 0.123 | 0.191 | — |
| chr17_47841244_G_C | chr17:47841244 | -0.282 | -0.146 | -0.348 | 0.0066% |
| chr17_47841278_T_G | chr17:47841278 | 0.282 | 0.141 | 0.360 | — |
| chr17_47841296_G_A | chr17:47841296 | -0.282 | -0.272 | -0.213 | — |
| chr17_47841349_T_C | chr17:47841349 | -0.282 | 0.013 | -0.180 | — |
| chr17_47841296_G_T | chr17:47841296 | -0.279 | -0.360 | -0.360 | — |
| chr17_47841358_T_G | chr17:47841358 | 0.277 | 0.065 | 0.360 | — |
| chr17_47841411_T_G | chr17:47841411 | -0.277 | -0.005 | 0.124 | — |
| chr17_47841206_A_C | chr17:47841206 | 0.216 | 0.065 | -0.472 | — |
| chr17_47841279_T_G | chr17:47841279 | -0.213 | -0.244 | -0.472 | — |
| chr17_47841291_C_T | chr17:47841291 | -0.216 | -0.126 | -0.472 | <0.001% |
| chr17_47841416_C_T | chr17:47841416 | 0.275 | -0.123 | 0.000 | 0.044% |
| chr17_47841244_G_A | chr17:47841244 | -0.272 | -0.189 | -0.337 | — |
| chr17_47841218_T_G | chr17:47841218 | 0.098 | 0.282 | 0.461 | — |
| chr17_47841314_G_C | chr17:47841314 | -0.236 | -0.113 | 0.461 | — |
| chr17_47841337_G_T | chr17:47841337 | -0.003 | 0.257 | 0.461 | — |
| chr17_47841414_C_T | chr17:47841414 | 0.269 | 0.093 | 0.000 | — |
| chr17_47841428_T_C | chr17:47841428 | 0.269 | 0.106 | 0.438 | — |
| chr17_47841275_C_T | chr17:47841275 | -0.262 | -0.191 | -0.427 | — |
| chr17_47841377_T_G | chr17:47841377 | -0.261 | 0.118 | 0.112 | — |
| chr17_47841491_A_C | chr17:47841491 | 0.261 | 0.015 | 0.169 | — |
| chr17_47841349_T_G | chr17:47841349 | -0.259 | 0.050 | -0.034 | — |
| chr17_47841381_C_T | chr17:47841381 | -0.257 | 0.008 | -0.022 | — |
| chr17_47841355_G_A | chr17:47841355 | -0.030 | 0.098 | 0.438 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.