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LRRC56
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near LRRC56
chr11:437,526..654,912, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_448426_G_A | chr11:448426 | -51,200 | -6,464 | -28,928 | 2.6e-5 |
| chr11_448432_T_C | chr11:448432 | -49,664 | -5,376 | -13,568 | 6.6e-6 |
| chr11_448424_G_C | chr11:448424 | -46,848 | -3,360 | -11,008 | 6.6e-6 |
| chr11_448406_A_G | chr11:448406 | -24,448 | -2,816 | -4,608 | 6.6e-6 |
| chr11_450352_C_G | chr11:450352 | 23,424 | 704 | -2,816 | 2.0e-5 |
| chr11_448297_C_G | chr11:448297 | 22,144 | 3,680 | -512 | 6.6e-6 |
| chr11_450351_C_T | chr11:450351 | 21,184 | 800 | 4,352 | 2.6e-5 |
| chr11_448194_C_T | chr11:448194 | 20,736 | 6,944 | 24,576 | 2.6e-5 |
| chr11_445825_C_T | chr11:445825 | -18,752 | -9,568 | -23,168 | 6.6e-6 |
| chr11_448240_G_A | chr11:448240 | -18,304 | -4,352 | -22,016 | 1.3e-5 |
| chr11_448434_C_T | chr11:448434 | -16,768 | -3,200 | -7,680 | 6.6e-6 |
| chr11_445937_A_G | chr11:445937 | 15,936 | 9,056 | 13,696 | 1.3e-5 |
| chr11_445854_T_C | chr11:445854 | 15,872 | 7,392 | 14,464 | 6.6e-6 |
| chr11_448286_C_T | chr11:448286 | 15,616 | 1,056 | -2,048 | 1.3e-5 |
| chr11_442006_C_T | chr11:442006 | -15,248 | -4,848 | -36,864 | 6.6e-6 |
| chr11_450332_C_T | chr11:450332 | 14,656 | 1,584 | 1,536 | 6.6e-6 |
| chr11_445817_G_A | chr11:445817 | -14,400 | -7,040 | -16,640 | 6.6e-6 |
| chr11_445939_C_A | chr11:445939 | 14,016 | 7,344 | 8,960 | 1.3e-5 |
| chr11_450348_C_T | chr11:450348 | 14,016 | 3,664 | 5,888 | 8.5e-5 |
| chr11_442007_C_T | chr11:442007 | -13,856 | -4,176 | -34,848 | 8.5e-5 |
| chr11_448625_A_C | chr11:448625 | 13,696 | 1,856 | 6,656 | 6.6e-6 |
| chr11_450123_C_G | chr11:450123 | 13,632 | 1,024 | 1,792 | 1.3e-5 |
| chr11_448108_C_T | chr11:448108 | -13,600 | -1,824 | -6,912 | 6.6e-6 |
| chr11_448422_G_A | chr11:448422 | -13,184 | -2,144 | -6,400 | 3.9e-5 |
| chr11_448215_C_T | chr11:448215 | 13,056 | 3,200 | 14,848 | 6.6e-6 |
| chr11_445896_T_A | chr11:445896 | -12,832 | -8,432 | -14,976 | 6.6e-6 |
| chr11_448403_G_T | chr11:448403 | 12,672 | -32 | -4,352 | 6.6e-6 |
| chr11_448311_G_C | chr11:448311 | -12,416 | -896 | -10,752 | 1.3e-5 |
| chr11_442007_C_A | chr11:442007 | -12,096 | -3,984 | -31,008 | 6.6e-6 |
| chr11_448243_A_C | chr11:448243 | -11,776 | -3,200 | -8,448 | 6.6e-6 |
| chr11_448345_G_A | chr11:448345 | 11,264 | 1,248 | 2,816 | 6.6e-6 |
| chr11_450333_C_G | chr11:450333 | 11,200 | 1,088 | -4,864 | 3.3e-5 |
| chr11_445894_C_T | chr11:445894 | 11,072 | 5,152 | 8,704 | 6.6e-6 |
| chr11_448239_C_T | chr11:448239 | -10,624 | -1,840 | -8,192 | 6.6e-6 |
| chr11_448240_G_C | chr11:448240 | -10,496 | -3,088 | -7,680 | 6.6e-6 |
| chr11_445856_G_A | chr11:445856 | 10,432 | 5,280 | 10,240 | 2.0e-5 |
| chr11_445871_C_A | chr11:445871 | 10,368 | 2,240 | 3,456 | 6.6e-6 |
| chr11_442025_C_T | chr11:442025 | -10,344 | -2,096 | -25,216 | 3.3e-5 |
| chr11_445821_G_C | chr11:445821 | 10,272 | 3,232 | 6,144 | 6.6e-6 |
| chr11_448243_A_G | chr11:448243 | -10,112 | -3,472 | -12,032 | 6.6e-6 |
| chr11_448158_T_C | chr11:448158 | -9,664 | -2,176 | -14,848 | 2.0e-5 |
| chr11_448349_T_G | chr11:448349 | 9,472 | 1,600 | 4,608 | 6.6e-6 |
| chr11_448036_G_T | chr11:448036 | -9,136 | -3,632 | -1,024 | 6.6e-6 |
| chr11_448555_C_G | chr11:448555 | 8,832 | 1,088 | 3,840 | 4.6e-5 |
| chr11_441802_C_G | chr11:441802 | 8,608 | 3,296 | 22,400 | 6.6e-6 |
| chr11_448395_A_G | chr11:448395 | 8,576 | 480 | 1,792 | 2.1e-5 |
| chr11_448402_C_A | chr11:448402 | -8,320 | -1,056 | -3,072 | 6.6e-6 |
| chr11_448062_T_C | chr11:448062 | 8,208 | 2,560 | 10,240 | 6.6e-6 |
| chr11_445849_T_G | chr11:445849 | -8,192 | -5,984 | -8,064 | 6.6e-6 |
| chr11_445941_C_A | chr11:445941 | 8,128 | 4,592 | 7,168 | 2.4e-3 |
| chr11_445840_G_A | chr11:445840 | -8,032 | -3,184 | -9,472 | 6.6e-6 |
| chr11_448250_G_C | chr11:448250 | 7,936 | 2,464 | 6,400 | 2.0e-5 |
| chr11_448118_C_T | chr11:448118 | -7,808 | -1,312 | -2,304 | 6.6e-6 |
| chr11_442168_G_C | chr11:442168 | -7,720 | -1,042 | 288 | 1.6e-4 |
| chr11_450162_G_C | chr11:450162 | -7,488 | -1,472 | -2,560 | 6.6e-6 |
| chr11_448374_C_T | chr11:448374 | 7,424 | -32 | 1,792 | 1.3e-5 |
| chr11_450354_C_T | chr11:450354 | 7,424 | 912 | 4,352 | 2.0e-5 |
| chr11_450281_A_T | chr11:450281 | -7,360 | -1,408 | -3,328 | 6.6e-6 |
| chr11_450152_C_T | chr11:450152 | -7,296 | -2,944 | -10,240 | 6.6e-6 |
| chr11_450328_G_C | chr11:450328 | 7,168 | 656 | -3,584 | 6.6e-6 |
| chr11_448037_G_A | chr11:448037 | -7,072 | -2,176 | 1,024 | 6.6e-6 |
| chr11_441997_A_G | chr11:441997 | 6,896 | -376 | 24,576 | 6.6e-6 |
| chr11_442043_G_A | chr11:442043 | -6,848 | -402 | -17,920 | 3.9e-5 |
| chr11_450137_C_G | chr11:450137 | 6,848 | 1,104 | 0 | 6.6e-6 |
| chr11_448153_C_A | chr11:448153 | 6,784 | 1,888 | 12,288 | 6.6e-6 |
| chr11_448388_G_A | chr11:448388 | -6,784 | -2,912 | -12,032 | 6.6e-6 |
| chr11_448346_G_A | chr11:448346 | 6,528 | 288 | -2,304 | 2.6e-5 |
| chr11_442023_C_T | chr11:442023 | -6,488 | -2,380 | -23,200 | 6.6e-6 |
| chr11_442189_C_T | chr11:442189 | -6,480 | -1,110 | -1,424 | 1.3e-5 |
| chr11_448213_C_G | chr11:448213 | 6,400 | 2,208 | 14,080 | 6.6e-6 |
| chr11_448355_T_G | chr11:448355 | -6,400 | 512 | 9,216 | 2.6e-5 |
| chr11_450331_C_G | chr11:450331 | 6,080 | -928 | -7,936 | 6.6e-6 |
| chr11_441999_C_A | chr11:441999 | 6,032 | 4 | 18,560 | 6.6e-6 |
| chr11_448197_T_C | chr11:448197 | -5,632 | -1,872 | -16,896 | 2.0e-5 |
| chr11_441948_A_G | chr11:441948 | 5,440 | 1,248 | 11,776 | 2.8e-2 |
| chr11_446189_C_T | chr11:446189 | 4,928 | 2,320 | 9,600 | 3.3e-5 |
| chr11_442222_A_G | chr11:442222 | 4,832 | 858 | 7,984 | 5.9e-5 |
| chr11_450155_A_T | chr11:450155 | 4,736 | 3,088 | 6,656 | 2.6e-5 |
| chr11_450485_A_G | chr11:450485 | -4,672 | -1,456 | -15,104 | 1.2e-2 |
| chr11_442057_G_T | chr11:442057 | -4,672 | -516 | -10,512 | 6.6e-6 |
| chr11_442078_G_A | chr11:442078 | -4,592 | -382 | -14,192 | 7.9e-4 |
| chr11_448247_C_A | chr11:448247 | -4,480 | -704 | -6,912 | 6.6e-6 |
| chr11_441840_G_C | chr11:441840 | 4,416 | 1,920 | 15,360 | 2.0e-5 |
| chr11_441844_G_A | chr11:441844 | 4,352 | 2,384 | 22,400 | 8.5e-5 |
| chr11_450196_G_A | chr11:450196 | -4,352 | -2,432 | -9,472 | 2.0e-5 |
| chr11_441848_G_C | chr11:441848 | 4,256 | 2,704 | 21,888 | 5.9e-5 |
| chr11_441843_G_T | chr11:441843 | 4,224 | 2,864 | 25,344 | 6.6e-6 |
| chr11_448217_C_T | chr11:448217 | 4,224 | 2,720 | 21,248 | 4.5e-4 |
| chr11_441857_G_A | chr11:441857 | 4,224 | 2,000 | 17,280 | 1.3e-5 |
| chr11_441726_G_A | chr11:441726 | 4,032 | 1,344 | 8,192 | 3.0e-4 |
| chr11_448109_G_T | chr11:448109 | 3,744 | 704 | 7,168 | 1.3e-5 |
| chr11_446167_G_C | chr11:446167 | -3,712 | -1,168 | -10,880 | 2.7e-5 |
| chr11_441841_G_A | chr11:441841 | 3,648 | 2,656 | 20,480 | 2.7e-4 |
| chr11_450574_C_G | chr11:450574 | 3,648 | 208 | 7,168 | — |
| chr11_450167_G_C | chr11:450167 | -3,648 | -656 | -6,656 | 1.3e-5 |
| chr11_442019_G_A | chr11:442019 | -3,616 | -600 | -13,856 | 6.6e-6 |
| chr11_441844_G_T | chr11:441844 | 3,584 | 1,952 | 18,816 | 6.6e-6 |
| chr11_441961_C_T | chr11:441961 | -3,488 | -800 | -9,792 | 4.6e-5 |
| chr11_442077_C_T | chr11:442077 | -3,396 | -820 | -9,920 | 3.9e-5 |
| chr11_441849_G_T | chr11:441849 | 3,296 | 2,528 | 19,456 | 1.3e-5 |
| chr11_442018_C_G | chr11:442018 | 3,280 | 656 | 6,464 | 3.9e-5 |
| chr11_441833_G_C | chr11:441833 | 3,232 | 1,616 | 14,464 | 2.0e-5 |
| chr11_448469_G_C | chr11:448469 | 3,072 | 1,536 | 14,336 | 6.6e-6 |
| chr11_450567_A_C | chr11:450567 | -3,072 | -1,056 | -9,728 | — |
| chr11_442089_C_T | chr11:442089 | 3,024 | 934 | 6,736 | 1.6e-4 |
| chr11_448419_T_C | chr11:448419 | 2,944 | 832 | -7,168 | 1.3e-5 |
| chr11_441840_G_A | chr11:441840 | 2,816 | 1,472 | 12,032 | 2.3e-4 |
| chr11_448074_A_G | chr11:448074 | -2,752 | -992 | -9,216 | 6.6e-6 |
| chr11_448218_C_T | chr11:448218 | 2,688 | 1,952 | 14,848 | 1.3e-5 |
| chr11_448220_C_T | chr11:448220 | 2,688 | 1,120 | 9,472 | 6.6e-6 |
| chr11_448276_G_A | chr11:448276 | -2,688 | -1,920 | -6,912 | 1.3e-5 |
| chr11_441833_G_A | chr11:441833 | 2,656 | 1,808 | 16,000 | 1.3e-5 |
| chr11_441854_G_A | chr11:441854 | 2,624 | 1,216 | 9,728 | 2.3e-2 |
| chr11_442010_G_A | chr11:442010 | 2,592 | 304 | 7,424 | 1.3e-5 |
| chr11_450191_C_T | chr11:450191 | 2,432 | 1,168 | 7,680 | 6.6e-6 |
| chr11_450550_C_T | chr11:450550 | 2,368 | 784 | 11,008 | 1.3e-5 |
| chr11_450581_G_T | chr11:450581 | 2,304 | 576 | 7,680 | — |
| chr11_442059_G_A | chr11:442059 | -2,120 | -482 | -12,752 | 1.5e-4 |
| chr11_441987_G_A | chr11:441987 | 2,112 | -1,568 | -21,696 | 1.5e-4 |
| chr11_450383_C_T | chr11:450383 | -1,920 | 800 | 8,448 | 2.6e-5 |
| chr11_450514_C_G | chr11:450514 | 1,920 | 736 | 7,168 | 6.6e-6 |
| chr11_450463_G_T | chr11:450463 | 1,856 | 464 | 7,168 | 6.6e-6 |
| chr11_441839_C_G | chr11:441839 | -1,792 | -856 | -12,800 | 2.0e-5 |
| chr11_450580_A_G | chr11:450580 | -1,792 | -608 | -6,656 | — |
| chr11_450463_G_A | chr11:450463 | 1,728 | 1,264 | 13,568 | 4.9e-3 |
| chr11_446163_C_T | chr11:446163 | 1,728 | 1,488 | 7,936 | 1.3e-5 |
| chr11_450614_C_T | chr11:450614 | 1,728 | 688 | 6,912 | — |
| chr11_448202_C_T | chr11:448202 | -1,664 | 704 | 10,496 | 2.6e-5 |
| chr11_450560_C_T | chr11:450560 | -1,664 | 800 | 9,728 | — |
| chr11_450405_G_A | chr11:450405 | -1,664 | 512 | 8,704 | 6.6e-6 |
| chr11_448221_C_G | chr11:448221 | 1,664 | 960 | 7,936 | 1.3e-5 |
| chr11_450558_G_A | chr11:450558 | 1,472 | 1,104 | 12,288 | — |
| chr11_450570_G_A | chr11:450570 | 1,472 | 848 | 10,496 | 6.6e-6 |
| chr11_450512_C_A | chr11:450512 | 1,472 | 864 | 9,984 | 6.6e-5 |
| chr11_450403_C_T | chr11:450403 | -1,472 | -208 | 7,168 | 6.6e-6 |
| chr11_450640_G_T | chr11:450640 | -1,472 | 848 | 6,912 | — |
| chr11_450512_C_T | chr11:450512 | 1,408 | 848 | 11,264 | 1.3e-5 |
| chr11_450562_A_C | chr11:450562 | -1,408 | -704 | -8,192 | — |
| chr11_450558_G_T | chr11:450558 | 1,344 | 1,200 | 13,568 | — |
| chr11_450561_C_T | chr11:450561 | 1,280 | 896 | 11,264 | — |
| chr11_450560_C_A | chr11:450560 | -1,152 | 720 | 8,704 | — |
| chr11_441951_T_C | chr11:441951 | 1,056 | 232 | 6,528 | 6.6e-6 |
| chr11_450619_G_T | chr11:450619 | 1,024 | 992 | 13,056 | — |
| chr11_448073_C_T | chr11:448073 | -1,024 | -640 | -11,520 | 1.3e-5 |
| chr11_450585_C_T | chr11:450585 | 1,024 | 528 | 6,912 | 6.6e-6 |
| chr11_450556_C_A | chr11:450556 | -960 | 624 | 10,752 | — |
| chr11_450556_C_T | chr11:450556 | -960 | 624 | 9,728 | — |
| chr11_450399_T_C | chr11:450399 | -896 | -1,648 | -10,752 | 6.6e-6 |
| chr11_450503_C_T | chr11:450503 | 896 | 864 | 10,240 | 6.6e-6 |
| chr11_450559_G_T | chr11:450559 | -896 | 464 | 8,704 | — |
| chr11_450579_G_T | chr11:450579 | 896 | 944 | 7,168 | — |
| chr11_450562_A_G | chr11:450562 | -832 | -800 | -11,520 | — |
| chr11_450467_C_T | chr11:450467 | 832 | 896 | 10,240 | 6.6e-6 |
| chr11_450569_C_T | chr11:450569 | 832 | 816 | 9,728 | 2.0e-5 |
| chr11_450574_C_A | chr11:450574 | 768 | 592 | 11,008 | — |
| chr11_450571_G_A | chr11:450571 | 768 | 448 | 9,472 | — |
| chr11_450587_C_A | chr11:450587 | 768 | 400 | 8,960 | — |
| chr11_450565_C_T | chr11:450565 | 768 | 624 | 6,656 | — |
| chr11_450462_A_C | chr11:450462 | -704 | -1,216 | -17,920 | 6.6e-6 |
| chr11_450564_G_T | chr11:450564 | 704 | 1,040 | 13,056 | — |
| chr11_450569_C_A | chr11:450569 | 704 | 960 | 9,728 | — |
| chr11_450574_C_T | chr11:450574 | 704 | 496 | 8,448 | — |
| chr11_450588_C_A | chr11:450588 | 704 | 704 | 7,936 | — |
| chr11_450576_G_A | chr11:450576 | 704 | 736 | 7,424 | 6.6e-6 |
| chr11_450585_C_A | chr11:450585 | 704 | 512 | 6,912 | — |
| chr11_450487_G_A | chr11:450487 | 640 | 832 | 8,448 | 6.6e-6 |
| chr11_450577_G_A | chr11:450577 | 640 | 816 | 6,912 | — |
| chr11_450513_G_A | chr11:450513 | -576 | 768 | 13,312 | 6.6e-6 |
| chr11_446164_C_G | chr11:446164 | -576 | 368 | 8,192 | 1.6e-4 |
| chr11_450559_G_A | chr11:450559 | -512 | 512 | 7,936 | — |
| chr11_450434_A_C | chr11:450434 | -448 | -960 | -10,496 | 6.6e-6 |
| chr11_450570_G_T | chr11:450570 | 448 | 672 | 10,240 | — |
| chr11_450571_G_T | chr11:450571 | 448 | 336 | 9,728 | — |
| chr11_450445_G_A | chr11:450445 | -448 | 784 | 8,704 | 6.6e-6 |
| chr11_450587_C_T | chr11:450587 | -448 | 400 | 7,424 | — |
| chr11_450564_G_A | chr11:450564 | 384 | 1,072 | 11,008 | 6.6e-6 |
| chr11_450545_C_T | chr11:450545 | 384 | 704 | 8,448 | 2.6e-5 |
| chr11_450584_C_A | chr11:450584 | -384 | 480 | 7,680 | — |
| chr11_450583_G_T | chr11:450583 | 384 | 368 | 6,656 | — |
| chr11_450575_G_T | chr11:450575 | 320 | 1,024 | 9,216 | — |
| chr11_450575_G_A | chr11:450575 | 320 | 608 | 8,704 | — |
| chr11_450572_G_A | chr11:450572 | -256 | 640 | 10,496 | — |
| chr11_450428_G_A | chr11:450428 | 256 | 688 | 9,472 | 6.6e-6 |
| chr11_450431_C_T | chr11:450431 | -256 | 624 | 7,936 | 3.9e-5 |
| chr11_450576_G_T | chr11:450576 | 256 | 528 | 7,424 | — |
| chr11_450539_G_T | chr11:450539 | -192 | 976 | 14,080 | 1.3e-5 |
| chr11_450505_C_T | chr11:450505 | 192 | 944 | 12,288 | 6.6e-6 |
| chr11_450578_C_T | chr11:450578 | 192 | 880 | 8,192 | 1.3e-5 |
| chr11_450578_C_A | chr11:450578 | 192 | 880 | 7,936 | — |
| chr11_446166_C_T | chr11:446166 | -192 | 1,088 | 7,424 | 6.8e-3 |
| chr11_450572_G_T | chr11:450572 | -128 | 848 | 11,264 | — |
| chr11_450586_G_A | chr11:450586 | 128 | 832 | 11,008 | — |
| chr11_450502_C_T | chr11:450502 | 128 | 848 | 10,240 | 6.6e-6 |
| chr11_450573_C_T | chr11:450573 | 128 | 800 | 9,728 | — |
| chr11_450586_G_T | chr11:450586 | -128 | 784 | 8,960 | — |
| chr11_450557_C_T | chr11:450557 | 128 | 528 | 8,448 | 1.3e-5 |
| chr11_450567_A_G | chr11:450567 | 64 | -800 | -9,472 | — |
| chr11_450573_C_A | chr11:450573 | -64 | 560 | 9,472 | — |
| chr11_450580_A_C | chr11:450580 | -64 | -784 | -9,216 | — |
| chr11_450561_C_A | chr11:450561 | 64 | 592 | 6,912 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.