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MICALL2

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near MICALL2

chr7:1,334,358..1,559,470, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr7_1369246_C_T	chr7:1369246	0.494	0.120	0.977	0.024%
chr7_1369246_C_A	chr7:1369246	0.430	0.103	0.866	0.0053%
chr7_1369085_C_T	chr7:1369085	0.167	0.133	0.690	0.0026%
chr7_1369094_G_A	chr7:1369094	0.114	0.125	0.678	<0.001%
chr7_1369095_C_A	chr7:1369095	0.067	0.105	0.559	<0.001%
chr7_1369084_C_T	chr7:1369084	0.082	0.096	0.534	0.0046%
chr7_1369253_C_T	chr7:1369253	0.274	0.071	0.495	0.0013%
chr7_1369190_G_C	chr7:1369190	-0.167	-0.075	-0.469	0.0026%
chr7_1369093_G_A	chr7:1369093	0.054	0.082	0.425	0.0059%
chr7_1369071_C_T	chr7:1369071	0.076	0.082	0.417	0.024%
chr7_1369083_G_A	chr7:1369083	0.044	0.072	0.408	0.0033%
chr7_1369221_G_T	chr7:1369221	-0.212	-0.069	-0.407	0.020%
chr7_1369252_C_T	chr7:1369252	0.186	0.095	0.402	0.0013%
chr7_1369070_G_A	chr7:1369070	0.028	0.050	0.376	0.035%
chr7_1369255_T_C	chr7:1369255	-0.111	-0.081	-0.363	<0.001%
chr7_1407722_C_T	chr7:1407722	0.063	-0.040	-0.353	<0.001%
chr7_1369104_T_C	chr7:1369104	-0.033	-0.056	-0.343	<0.001%
chr7_1369126_C_T	chr7:1369126	0.030	0.029	0.340	0.0013%
chr7_1369069_G_A	chr7:1369069	0.024	0.054	0.332	0.0046%
chr7_1369241_C_T	chr7:1369241	-0.176	-0.059	-0.320	0.024%
chr7_1369104_T_G	chr7:1369104	-0.049	-0.075	-0.319	<0.001%
chr7_1346442_G_A	chr7:1346442	-0.029	0.257	0.314	4.79%
chr7_1368985_G_A	chr7:1368985	0.089	0.042	0.314	<0.001%
chr7_1369056_C_T	chr7:1369056	0.044	0.047	0.304	<0.001%
chr7_1369089_C_A	chr7:1369089	0.026	0.044	0.296	0.0059%
chr7_1369057_C_T	chr7:1369057	0.035	0.040	0.289	<0.001%
chr7_1369078_C_T	chr7:1369078	0.022	0.048	0.284	0.0033%
chr7_1369077_C_T	chr7:1369077	0.029	0.058	0.279	0.0013%
chr7_1369066_C_T	chr7:1369066	-0.001	0.035	0.278	0.0013%
chr7_1369423_C_G	chr7:1369423	0.059	0.044	0.276	<0.001%
chr7_1355758_C_T	chr7:1355758	0.006	0.020	0.275	<0.001%
chr7_1407723_A_T	chr7:1407723	0.053	-0.035	-0.275	0.0072%
chr7_1355792_G_T	chr7:1355792	-0.024	-0.018	-0.261	0.0026%
chr7_1407741_C_T	chr7:1407741	-0.030	0.048	0.261	<0.001%
chr7_1407790_G_A	chr7:1407790	0.009	-0.030	-0.261	0.024%
chr7_1369190_G_A	chr7:1369190	-0.117	-0.075	-0.252	<0.001%
chr7_1369218_C_A	chr7:1369218	-0.153	-0.006	-0.020	0.0033%
chr7_1355774_G_A	chr7:1355774	-0.049	-0.030	-0.235	<0.001%
chr7_1369066_C_A	chr7:1369066	-0.018	0.029	0.229	0.120%
chr7_1369378_G_C	chr7:1369378	-0.141	-0.034	-0.221	0.0011%
chr7_1369364_C_A	chr7:1369364	0.030	0.048	0.221	<0.001%
chr7_1369234_G_C	chr7:1369234	-0.057	-0.038	-0.211	<0.001%
chr7_1359190_T_C	chr7:1359190	-0.004	-0.072	-0.209	<0.001%
chr7_1369282_A_C	chr7:1369282	-0.047	-0.031	-0.209	0.0018%
chr7_1346378_G_A	chr7:1346378	-0.060	-0.037	-0.203	<0.001%
chr7_1355685_C_T	chr7:1355685	0.093	0.088	0.203	<0.001%
chr7_1369072_G_T	chr7:1369072	0.011	0.026	0.201	<0.001%
chr7_1369222_C_T	chr7:1369222	-0.127	-0.032	-0.173	0.020%
chr7_1346371_G_T	chr7:1346371	-0.014	-0.040	-0.196	0.0013%
chr7_1346378_G_T	chr7:1346378	-0.023	-0.067	-0.196	<0.001%
chr7_1346490_A_T	chr7:1346490	0.006	-0.101	-0.190	<0.001%
chr7_1369409_C_T	chr7:1369409	0.026	0.067	0.186	<0.001%
chr7_1355793_C_T	chr7:1355793	-0.055	-0.018	-0.183	0.012%
chr7_1355824_C_T	chr7:1355824	-0.002	0.029	-0.183	0.0046%
chr7_1369039_G_A	chr7:1369039	0.028	0.034	0.181	0.021%
chr7_1369099_G_T	chr7:1369099	0.002	0.036	0.181	<0.001%
chr7_1369015_A_G	chr7:1369015	-0.022	-0.019	-0.180	<0.001%
chr7_1355777_C_T	chr7:1355777	-0.075	-0.003	-0.176	0.0013%
chr7_1369149_G_C	chr7:1369149	0.024	0.010	-0.176	0.011%
chr7_1369516_G_C	chr7:1369516	-0.041	-0.020	-0.173	<0.001%
chr7_1368959_T_C	chr7:1368959	0.011	-0.034	0.170	<0.001%
chr7_1369140_G_A	chr7:1369140	0.107	0.064	-0.033	<0.001%
chr7_1369344_C_T	chr7:1369344	0.034	0.041	0.165	<0.001%
chr7_1355727_G_A	chr7:1355727	-0.022	-0.005	-0.163	0.0026%
chr7_1407683_C_A	chr7:1407683	0.005	-0.024	-0.163	<0.001%
chr7_1407725_A_G	chr7:1407725	0.030	-0.005	-0.163	<0.001%
chr7_1369185_A_C	chr7:1369185	0.102	0.023	0.139	<0.001%
chr7_1369226_C_A	chr7:1369226	-0.102	-0.020	-0.141	0.0020%
chr7_1368979_G_A	chr7:1368979	0.041	0.024	0.160	<0.001%
chr7_1369042_C_A	chr7:1369042	0.001	0.017	0.160	<0.001%
chr7_1355828_G_A	chr7:1355828	-0.010	-0.006	-0.157	<0.001%
chr7_1407728_G_A	chr7:1407728	-0.021	0.018	0.157	<0.001%
chr7_1407780_G_A	chr7:1407780	0.007	-0.003	-0.157	0.0026%
chr7_1357911_G_A	chr7:1357911	0.014	-0.015	0.154	0.206%
chr7_1369235_G_A	chr7:1369235	-0.074	-0.021	-0.154	0.083%
chr7_1355854_T_C	chr7:1355854	0.011	0.016	0.150	<0.001%
chr7_1407671_G_A	chr7:1407671	-0.021	0.008	0.150	0.857%
chr7_1407679_C_G	chr7:1407679	-0.013	0.010	0.150	<0.001%
chr7_1407820_G_A	chr7:1407820	0.006	-0.014	-0.150	<0.001%
chr7_1369368_T_C	chr7:1369368	-0.033	-0.024	-0.145	0.030%
chr7_1355766_C_T	chr7:1355766	-0.024	-0.021	-0.144	<0.001%
chr7_1355790_C_T	chr7:1355790	0.065	0.042	-0.144	<0.001%
chr7_1393499_A_C	chr7:1393499	0.067	-0.005	0.134	—
chr7_1407647_G_A	chr7:1407647	0.011	-0.005	-0.144	0.0013%
chr7_1369148_C_T	chr7:1369148	0.066	0.034	0.142	0.0013%
chr7_1369281_C_T	chr7:1369281	-0.087	-0.024	-0.142	0.0020%
chr7_1346393_G_C	chr7:1346393	-0.010	-0.048	-0.137	<0.001%
chr7_1355773_C_T	chr7:1355773	0.047	0.035	0.137	0.267%
chr7_1355779_G_A	chr7:1355779	-0.034	0.016	-0.137	0.0013%
chr7_1369422_C_G	chr7:1369422	0.026	0.019	0.137	0.0013%
chr7_1407825_C_G	chr7:1407825	0.031	0.022	0.137	<0.001%
chr7_1346363_T_G	chr7:1346363	-0.029	-0.026	-0.131	<0.001%
chr7_1355778_C_A	chr7:1355778	-0.013	0.050	-0.131	<0.001%
chr7_1355804_G_A	chr7:1355804	-0.031	0.070	-0.131	0.043%
chr7_1369234_G_T	chr7:1369234	-0.062	-0.022	-0.129	<0.001%
chr7_1369178_T_C	chr7:1369178	0.079	-0.012	-0.008	<0.001%
chr7_1346362_C_T	chr7:1346362	0.023	0.061	0.124	<0.001%
chr7_1346364_G_C	chr7:1346364	-0.020	-0.046	-0.124	<0.001%
chr7_1346523_C_A	chr7:1346523	0.031	0.075	0.124	0.0013%
chr7_1355761_T_C	chr7:1355761	-0.037	-0.045	-0.124	<0.001%
chr7_1355856_G_A	chr7:1355856	0.010	-0.006	0.124	<0.001%
chr7_1369195_G_C	chr7:1369195	-0.078	-0.019	-0.121	<0.001%
chr7_1407632_C_T	chr7:1407632	0.012	-0.014	-0.124	0.0013%
chr7_1407652_C_A	chr7:1407652	0.004	0.053	0.124	<0.001%
chr7_1407685_G_T	chr7:1407685	0.011	-0.013	-0.124	0.0039%
chr7_1358119_G_T	chr7:1358119	0.034	0.020	0.123	<0.001%
chr7_1369303_T_C	chr7:1369303	-0.021	-0.021	-0.123	0.026%
chr7_1369164_G_T	chr7:1369164	0.013	-0.013	-0.121	<0.001%
chr7_1369036_C_T	chr7:1369036	-0.013	0.014	0.119	<0.001%
chr7_1369102_G_C	chr7:1369102	0.075	0.057	-0.049	<0.001%
chr7_1369465_G_A	chr7:1369465	-0.048	-0.010	-0.119	0.0014%
chr7_1393439_G_C	chr7:1393439	-0.006	-0.005	0.110	—
chr7_1407795_T_G	chr7:1407795	-0.008	-0.027	-0.118	0.0026%
chr7_1369105_G_C	chr7:1369105	-0.052	-0.024	-0.116	0.0013%
chr7_1369166_G_T	chr7:1369166	0.072	-0.003	0.039	<0.001%
chr7_1369318_C_T	chr7:1369318	0.071	0.023	0.074	0.0034%
chr7_1369487_C_T	chr7:1369487	0.042	0.015	0.113	<0.001%
chr7_1368973_G_A	chr7:1368973	0.034	0.028	0.111	0.0013%
chr7_1407818_C_T	chr7:1407818	0.008	-0.010	-0.111	0.014%
chr7_1369144_G_A	chr7:1369144	0.070	0.046	-0.025	<0.001%
chr7_1369169_G_A	chr7:1369169	-0.055	-0.010	-0.108	<0.001%
chr7_1369261_A_C	chr7:1369261	-0.067	-0.021	-0.100	<0.001%
chr7_1346508_G_A	chr7:1346508	0.035	0.032	0.105	<0.001%
chr7_1357963_G_T	chr7:1357963	0.057	0.050	0.105	0.0020%
chr7_1368969_G_A	chr7:1368969	-0.044	-0.033	-0.105	0.0026%
chr7_1369491_C_G	chr7:1369491	0.031	0.006	0.105	<0.001%
chr7_1369050_C_T	chr7:1369050	-0.036	0.016	0.103	0.0020%
chr7_1369302_A_G	chr7:1369302	-0.065	-0.018	0.008	0.0015%
chr7_1369131_C_A	chr7:1369131	-0.064	-0.022	0.013	0.0013%
chr7_1358113_G_C	chr7:1358113	-0.034	-0.005	-0.100	0.0013%
chr7_1369022_G_A	chr7:1369022	0.012	0.017	0.100	<0.001%
chr7_1369202_G_A	chr7:1369202	0.047	0.028	0.100	<0.001%
chr7_1369478_A_T	chr7:1369478	0.016	0.010	0.100	<0.001%
chr7_1369562_C_G	chr7:1369562	0.021	0.013	0.100	<0.001%
chr7_1369592_A_G	chr7:1369592	0.015	0.009	0.100	<0.001%
chr7_1346406_G_A	chr7:1346406	0.009	0.065	0.098	0.0013%
chr7_1355748_G_C	chr7:1355748	-0.012	-0.058	-0.098	<0.001%
chr7_1355789_C_T	chr7:1355789	0.018	0.011	-0.098	<0.001%
chr7_1407667_C_T	chr7:1407667	0.025	-0.010	-0.098	<0.001%
chr7_1407750_G_A	chr7:1407750	0.019	-0.002	-0.098	0.0013%
chr7_1407807_C_T	chr7:1407807	-0.001	-0.010	-0.098	<0.001%
chr7_1368967_C_T	chr7:1368967	-0.028	-0.015	-0.096	0.0033%
chr7_1369463_C_A	chr7:1369463	-0.061	0.013	-0.052	<0.001%
chr7_1346341_G_A	chr7:1346341	0.004	-0.011	-0.092	<0.001%
chr7_1346366_G_T	chr7:1346366	0.046	0.026	0.092	<0.001%
chr7_1346524_G_A	chr7:1346524	0.024	0.093	0.092	0.0020%
chr7_1355805_G_T	chr7:1355805	-0.013	-0.010	-0.092	0.0013%
chr7_1357936_G_C	chr7:1357936	0.004	0.007	-0.092	0.0053%
chr7_1393515_A_G	chr7:1393515	0.001	-0.017	-0.085	—
chr7_1407648_C_T	chr7:1407648	0.005	0.000	-0.092	0.0026%
chr7_1407656_C_T	chr7:1407656	-0.006	0.034	0.092	0.019%
chr7_1407683_C_G	chr7:1407683	0.005	-0.013	-0.092	<0.001%
chr7_1369028_G_T	chr7:1369028	-0.006	0.014	0.088	0.0013%
chr7_1369234_G_A	chr7:1369234	-0.056	-0.016	-0.087	<0.001%
chr7_1369115_G_A	chr7:1369115	-0.003	0.018	0.087	<0.001%
chr7_1346368_T_C	chr7:1346368	0.009	-0.058	-0.085	<0.001%
chr7_1346385_C_G	chr7:1346385	0.000	0.030	0.085	0.0033%
chr7_1346408_G_C	chr7:1346408	0.031	0.054	0.085	<0.001%
chr7_1346475_C_G	chr7:1346475	0.033	0.010	0.085	0.0013%
chr7_1346514_G_T	chr7:1346514	0.011	0.035	0.085	0.0013%
chr7_1346523_C_T	chr7:1346523	0.018	0.059	0.085	<0.001%
chr7_1346710_T_C	chr7:1346710	-0.004	0.000	0.085	<0.001%
chr7_1355677_C_T	chr7:1355677	-0.018	-0.008	-0.085	0.207%
chr7_1355698_G_A	chr7:1355698	-0.016	0.003	-0.085	0.0039%
chr7_1355754_C_T	chr7:1355754	-0.026	0.002	-0.085	0.0013%
chr7_1355756_C_T	chr7:1355756	0.009	0.014	0.085	<0.001%
chr7_1355848_C_A	chr7:1355848	-0.021	-0.002	-0.085	<0.001%
chr7_1369189_C_T	chr7:1369189	-0.036	-0.002	-0.085	<0.001%
chr7_1393438_G_C	chr7:1393438	0.003	0.001	0.079	—
chr7_1407642_G_T	chr7:1407642	-0.002	0.000	-0.085	<0.001%
chr7_1407792_C_A	chr7:1407792	0.003	0.003	-0.085	<0.001%
chr7_1358167_G_A	chr7:1358167	0.016	0.002	-0.083	<0.001%
chr7_1357933_G_C	chr7:1357933	0.038	0.016	0.082	0.0013%
chr7_1369124_C_A	chr7:1369124	0.020	0.014	0.082	<0.001%
chr7_1369183_G_A	chr7:1369183	-0.034	-0.003	-0.082	<0.001%
chr7_1369431_C_A	chr7:1369431	-0.015	-0.006	0.082	0.0060%
chr7_1369175_T_C	chr7:1369175	0.051	-0.001	0.060	<0.001%
chr7_1346376_T_C	chr7:1346376	0.003	-0.040	-0.078	0.0020%
chr7_1346507_C_T	chr7:1346507	0.024	0.034	0.078	0.0033%
chr7_1355778_C_T	chr7:1355778	-0.012	0.073	-0.078	0.0013%
chr7_1355799_G_A	chr7:1355799	0.036	0.050	0.078	<0.001%
chr7_1355847_G_T	chr7:1355847	-0.016	-0.002	-0.078	0.0020%
chr7_1355858_G_T	chr7:1355858	0.004	-0.010	0.078	<0.001%
chr7_1359195_T_C	chr7:1359195	-0.004	0.011	-0.078	<0.001%
chr7_1368952_A_C	chr7:1368952	-0.049	-0.021	-0.028	0.0013%
chr7_1369249_G_C	chr7:1369249	-0.039	-0.030	-0.078	0.150%
chr7_1369256_C_T	chr7:1369256	0.030	0.017	0.078	<0.001%
chr7_1369411_C_A	chr7:1369411	-0.049	0.048	0.026	<0.001%
chr7_1393399_A_G	chr7:1393399	0.003	-0.009	-0.073	—
chr7_1393439_G_T	chr7:1393439	-0.011	0.001	0.073	—
chr7_1393461_G_C	chr7:1393461	-0.003	-0.001	0.073	—
chr7_1393494_T_G	chr7:1393494	-0.003	-0.003	0.073	—
chr7_1393526_A_C	chr7:1393526	-0.001	-0.003	0.073	—
chr7_1407707_C_G	chr7:1407707	-0.006	0.005	0.078	0.0013%
chr7_1407743_G_C	chr7:1407743	0.019	0.006	-0.078	0.020%
chr7_1407745_C_T	chr7:1407745	0.012	0.008	-0.078	0.0039%
chr7_1407764_G_A	chr7:1407764	-0.003	0.005	-0.078	0.0092%
chr7_1369050_C_G	chr7:1369050	-0.023	-0.006	-0.077	<0.001%
chr7_1369059_C_G	chr7:1369059	0.025	0.017	0.077	<0.001%
chr7_1355840_T_C	chr7:1355840	-0.047	0.032	0.039	0.0013%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.