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NLRP6
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near NLRP6
chr11:178,406..385,388, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_207289_T_C | chr11:207289 | 0.654 | 0.146 | 0.211 | — |
| chr11_207233_C_T | chr11:207233 | 0.126 | 0.118 | 0.772 | — |
| chr11_207387_G_A | chr11:207387 | 0.407 | 0.219 | 0.632 | 0.021% |
| chr11_192243_C_A | chr11:192243 | 0.403 | 0.228 | 0.693 | 0.0027% |
| chr11_207270_C_T | chr11:207270 | -0.348 | -0.043 | -0.070 | — |
| chr11_207270_C_G | chr11:207270 | -0.344 | -0.093 | -0.281 | <0.001% |
| chr11_207376_G_C | chr11:207376 | 0.189 | -0.204 | 0.608 | — |
| chr11_207230_A_C | chr11:207230 | -0.141 | -0.081 | -0.538 | — |
| chr11_207379_G_T | chr11:207379 | 0.305 | -0.003 | -0.094 | — |
| chr11_207268_C_T | chr11:207268 | -0.303 | -0.030 | -0.187 | <0.001% |
| chr11_207270_C_A | chr11:207270 | -0.293 | -0.068 | -0.140 | — |
| chr11_207276_C_G | chr11:207276 | -0.290 | -0.030 | -0.070 | — |
| chr11_207293_C_G | chr11:207293 | 0.281 | 0.030 | 0.281 | — |
| chr11_207268_C_A | chr11:207268 | -0.276 | -0.013 | -0.140 | — |
| chr11_207277_C_G | chr11:207277 | -0.275 | -0.028 | -0.070 | — |
| chr11_207273_C_T | chr11:207273 | -0.273 | 0.010 | -0.023 | — |
| chr11_207156_G_T | chr11:207156 | -0.101 | -0.281 | -0.536 | 0.107% |
| chr11_207268_C_G | chr11:207268 | -0.267 | -0.025 | -0.117 | — |
| chr11_207277_C_A | chr11:207277 | -0.267 | 0.005 | 0.047 | — |
| chr11_207230_A_G | chr11:207230 | -0.089 | -0.060 | -0.468 | — |
| chr11_207402_C_A | chr11:207402 | 0.046 | -0.093 | -0.468 | — |
| chr11_207269_C_T | chr11:207269 | -0.253 | -0.025 | -0.140 | — |
| chr11_207302_C_A | chr11:207302 | 0.253 | 0.043 | 0.421 | — |
| chr11_207245_C_A | chr11:207245 | 0.240 | 0.189 | 0.444 | — |
| chr11_207376_G_A | chr11:207376 | 0.248 | -0.028 | 0.023 | — |
| chr11_207302_C_G | chr11:207302 | 0.247 | 0.003 | 0.421 | — |
| chr11_207313_G_C | chr11:207313 | -0.247 | -0.078 | -0.117 | — |
| chr11_207276_C_T | chr11:207276 | -0.245 | 0.003 | 0.117 | — |
| chr11_207271_T_C | chr11:207271 | 0.242 | 0.013 | 0.047 | — |
| chr11_207232_G_C | chr11:207232 | -0.106 | -0.048 | -0.421 | — |
| chr11_207269_C_G | chr11:207269 | -0.238 | -0.038 | -0.211 | — |
| chr11_207274_C_T | chr11:207274 | -0.238 | -0.018 | 0.000 | — |
| chr11_207291_T_C | chr11:207291 | -0.111 | -0.073 | -0.421 | — |
| chr11_207317_G_C | chr11:207317 | -0.238 | -0.053 | -0.187 | — |
| chr11_207301_A_T | chr11:207301 | 0.237 | -0.003 | 0.257 | — |
| chr11_189760_G_A | chr11:189760 | -0.100 | -0.043 | -0.466 | 0.0079% |
| chr11_207261_G_C | chr11:207261 | 0.235 | 0.083 | 0.117 | — |
| chr11_207379_G_C | chr11:207379 | 0.228 | -0.023 | -0.140 | — |
| chr11_207275_C_A | chr11:207275 | -0.227 | -0.003 | 0.140 | — |
| chr11_207277_C_T | chr11:207277 | -0.227 | 0.028 | 0.000 | — |
| chr11_207293_C_A | chr11:207293 | 0.137 | 0.023 | 0.398 | — |
| chr11_207303_C_G | chr11:207303 | 0.189 | -0.018 | 0.398 | — |
| chr11_207303_C_T | chr11:207303 | 0.175 | 0.013 | 0.398 | — |
| chr11_207320_A_C | chr11:207320 | 0.225 | 0.076 | 0.351 | — |
| chr11_207375_A_T | chr11:207375 | -0.103 | 0.123 | 0.398 | — |
| chr11_207381_G_T | chr11:207381 | 0.225 | 0.111 | -0.117 | — |
| chr11_207390_G_A | chr11:207390 | -0.070 | 0.050 | 0.398 | — |
| chr11_207278_A_G | chr11:207278 | -0.224 | -0.025 | -0.234 | — |
| chr11_207377_A_G | chr11:207377 | 0.222 | -0.113 | -0.117 | — |
| chr11_207276_C_A | chr11:207276 | -0.217 | 0.030 | 0.117 | 0.0013% |
| chr11_207382_G_C | chr11:207382 | 0.215 | -0.098 | -0.164 | <0.001% |
| chr11_207044_G_T | chr11:207044 | 0.033 | 0.121 | 0.418 | <0.001% |
| chr11_207202_T_A | chr11:207202 | -0.188 | -0.230 | -0.418 | 0.0020% |
| chr11_207202_T_G | chr11:207202 | -0.208 | -0.236 | -0.418 | 0.0013% |
| chr11_207272_G_C | chr11:207272 | -0.129 | -0.043 | -0.374 | — |
| chr11_207273_C_A | chr11:207273 | -0.212 | 0.113 | 0.094 | — |
| chr11_207295_G_C | chr11:207295 | -0.139 | -0.060 | -0.374 | — |
| chr11_207303_C_A | chr11:207303 | 0.144 | 0.013 | 0.374 | — |
| chr11_207271_T_G | chr11:207271 | -0.200 | -0.060 | -0.281 | — |
| chr11_207273_C_G | chr11:207273 | -0.200 | -0.023 | 0.000 | — |
| chr11_207230_A_T | chr11:207230 | -0.106 | -0.030 | -0.351 | — |
| chr11_207380_T_A | chr11:207380 | 0.056 | -0.128 | -0.351 | — |
| chr11_207380_T_C | chr11:207380 | 0.086 | -0.088 | -0.351 | — |
| chr11_207380_T_G | chr11:207380 | -0.003 | -0.136 | -0.351 | — |
| chr11_207383_C_G | chr11:207383 | -0.036 | -0.181 | -0.351 | — |
| chr11_207325_G_A | chr11:207325 | -0.189 | 0.003 | -0.211 | <0.001% |
| chr11_207269_C_A | chr11:207269 | -0.185 | 0.033 | -0.047 | — |
| chr11_207284_T_C | chr11:207284 | -0.093 | -0.063 | -0.327 | — |
| chr11_207300_C_G | chr11:207300 | 0.126 | 0.071 | 0.327 | — |
| chr11_207302_C_T | chr11:207302 | 0.131 | -0.060 | 0.327 | — |
| chr11_207346_G_C | chr11:207346 | 0.185 | 0.212 | 0.117 | — |
| chr11_207370_G_C | chr11:207370 | -0.185 | -0.068 | -0.140 | — |
| chr11_207383_C_A | chr11:207383 | 0.003 | -0.144 | -0.327 | — |
| chr11_207317_G_T | chr11:207317 | -0.184 | -0.035 | -0.117 | — |
| chr11_189824_T_G | chr11:189824 | -0.095 | -0.022 | -0.355 | <0.001% |
| chr11_207278_A_T | chr11:207278 | -0.179 | 0.013 | 0.023 | — |
| chr11_207275_C_T | chr11:207275 | -0.175 | 0.010 | 0.094 | — |
| chr11_207275_C_G | chr11:207275 | -0.174 | -0.018 | 0.094 | 27.2% |
| chr11_207201_G_A | chr11:207201 | -0.140 | -0.141 | -0.340 | 0.0020% |
| chr11_207265_C_A | chr11:207265 | 0.051 | 0.050 | 0.304 | — |
| chr11_207287_G_C | chr11:207287 | -0.167 | -0.045 | -0.304 | — |
| chr11_207329_T_C | chr11:207329 | 0.050 | -0.058 | -0.304 | 0.0057% |
| chr11_207331_C_A | chr11:207331 | 0.172 | 0.146 | 0.234 | — |
| chr11_207355_G_C | chr11:207355 | 0.040 | 0.003 | 0.304 | — |
| chr11_207360_G_C | chr11:207360 | -0.103 | -0.003 | -0.304 | — |
| chr11_207382_G_T | chr11:207382 | 0.172 | 0.018 | -0.023 | — |
| chr11_207385_C_G | chr11:207385 | -0.126 | -0.191 | -0.304 | — |
| chr11_207386_A_C | chr11:207386 | -0.017 | -0.131 | -0.304 | 0.014% |
| chr11_207393_G_T | chr11:207393 | 0.103 | 0.023 | 0.304 | — |
| chr11_207299_T_C | chr11:207299 | -0.167 | -0.146 | -0.164 | — |
| chr11_207395_G_C | chr11:207395 | 0.166 | 0.043 | 0.047 | — |
| chr11_207319_C_T | chr11:207319 | 0.164 | 0.101 | 0.187 | — |
| chr11_189767_G_C | chr11:189767 | -0.073 | -0.051 | -0.322 | 0.775% |
| chr11_207300_C_A | chr11:207300 | 0.161 | 0.010 | 0.281 | — |
| chr11_207233_C_G | chr11:207233 | -0.152 | -0.063 | -0.281 | — |
| chr11_207260_C_T | chr11:207260 | -0.061 | -0.030 | -0.281 | — |
| chr11_207265_C_T | chr11:207265 | 0.051 | 0.058 | 0.281 | — |
| chr11_207317_G_A | chr11:207317 | -0.159 | -0.015 | -0.047 | — |
| chr11_207385_C_A | chr11:207385 | -0.079 | -0.161 | -0.281 | — |
| chr11_207395_G_T | chr11:207395 | 0.159 | 0.045 | 0.117 | — |
| chr11_207236_C_G | chr11:207236 | -0.157 | -0.043 | -0.211 | — |
| chr11_190000_G_A | chr11:190000 | -0.066 | -0.044 | -0.310 | <0.001% |
| chr11_207187_T_G | chr11:207187 | 0.194 | 0.058 | 0.078 | <0.001% |
| chr11_207251_C_G | chr11:207251 | -0.154 | -0.060 | -0.140 | — |
| chr11_207301_A_G | chr11:207301 | 0.154 | -0.035 | 0.164 | — |
| chr11_189877_G_A | chr11:189877 | -0.060 | -0.049 | -0.297 | 0.012% |
| chr11_207378_C_G | chr11:207378 | 0.149 | -0.033 | -0.070 | — |
| chr11_207231_C_A | chr11:207231 | -0.147 | 0.028 | -0.117 | — |
| chr11_207229_C_A | chr11:207229 | -0.124 | -0.058 | -0.257 | — |
| chr11_207252_G_T | chr11:207252 | 0.096 | 0.043 | 0.257 | — |
| chr11_207267_G_C | chr11:207267 | -0.106 | -0.065 | -0.257 | — |
| chr11_207274_C_G | chr11:207274 | -0.146 | -0.010 | 0.117 | — |
| chr11_207292_C_T | chr11:207292 | 0.104 | 0.131 | 0.257 | — |
| chr11_207298_C_T | chr11:207298 | 0.007 | -0.045 | 0.257 | — |
| chr11_207312_A_C | chr11:207312 | -0.103 | -0.073 | -0.257 | — |
| chr11_207349_G_C | chr11:207349 | 0.113 | -0.008 | -0.257 | — |
| chr11_207352_A_C | chr11:207352 | -0.146 | -0.043 | -0.211 | — |
| chr11_207369_C_T | chr11:207369 | 0.123 | 0.053 | 0.257 | — |
| chr11_207381_G_C | chr11:207381 | 0.109 | -0.060 | -0.257 | — |
| chr11_207383_C_T | chr11:207383 | 0.142 | -0.154 | -0.257 | — |
| chr11_207388_T_G | chr11:207388 | -0.139 | 0.096 | -0.257 | — |
| chr11_207401_G_T | chr11:207401 | -0.023 | -0.043 | -0.257 | — |
| chr11_207231_C_G | chr11:207231 | -0.144 | -0.008 | -0.211 | — |
| chr11_207259_T_C | chr11:207259 | 0.144 | 0.073 | 0.047 | — |
| chr11_207285_C_G | chr11:207285 | 0.144 | 0.003 | 0.117 | — |
| chr11_207348_G_C | chr11:207348 | -0.142 | 0.035 | -0.140 | — |
| chr11_207229_C_T | chr11:207229 | -0.139 | -0.015 | -0.140 | — |
| chr11_192183_G_A | chr11:192183 | -0.171 | -0.261 | -0.255 | <0.001% |
| chr11_207278_A_C | chr11:207278 | -0.137 | -0.030 | -0.187 | — |
| chr11_207283_C_G | chr11:207283 | -0.136 | -0.033 | 0.000 | <0.001% |
| chr11_207358_G_C | chr11:207358 | 0.136 | 0.025 | 0.094 | — |
| chr11_207372_C_G | chr11:207372 | -0.136 | 0.076 | 0.070 | — |
| chr11_207266_G_C | chr11:207266 | 0.134 | -0.028 | 0.070 | — |
| chr11_207267_G_A | chr11:207267 | -0.134 | -0.010 | -0.094 | — |
| chr11_207256_G_A | chr11:207256 | -0.108 | -0.030 | -0.234 | — |
| chr11_207260_C_G | chr11:207260 | -0.070 | -0.033 | -0.234 | — |
| chr11_207262_G_C | chr11:207262 | -0.025 | -0.043 | -0.234 | — |
| chr11_207295_G_A | chr11:207295 | -0.060 | 0.038 | 0.234 | — |
| chr11_207298_C_G | chr11:207298 | -0.015 | -0.055 | 0.234 | — |
| chr11_207312_A_G | chr11:207312 | -0.083 | -0.043 | -0.234 | — |
| chr11_207354_C_T | chr11:207354 | 0.007 | 0.093 | 0.234 | 0.0081% |
| chr11_207359_C_T | chr11:207359 | -0.099 | -0.003 | 0.234 | 0.063% |
| chr11_207377_A_C | chr11:207377 | 0.096 | -0.093 | -0.234 | — |
| chr11_207381_G_A | chr11:207381 | 0.132 | -0.038 | -0.211 | — |
| chr11_207393_G_C | chr11:207393 | 0.132 | 0.081 | 0.117 | — |
| chr11_207272_G_A | chr11:207272 | -0.131 | 0.008 | -0.140 | — |
| chr11_192188_A_G | chr11:192188 | 0.161 | 0.061 | 0.232 | 0.0027% |
| chr11_207280_C_A | chr11:207280 | -0.129 | 0.018 | 0.047 | — |
| chr11_207363_C_T | chr11:207363 | 0.129 | 0.048 | -0.070 | — |
| chr11_192440_C_G | chr11:192440 | 0.080 | 0.097 | 0.253 | 0.0013% |
| chr11_207378_C_T | chr11:207378 | 0.126 | -0.020 | -0.187 | — |
| chr11_207229_C_G | chr11:207229 | -0.124 | -0.038 | -0.211 | — |
| chr11_207232_G_A | chr11:207232 | -0.124 | -0.023 | -0.164 | — |
| chr11_207236_C_A | chr11:207236 | -0.124 | 0.003 | -0.164 | — |
| chr11_207274_C_A | chr11:207274 | -0.124 | -0.015 | 0.023 | — |
| chr11_189822_C_G | chr11:189822 | -0.062 | -0.008 | -0.243 | <0.001% |
| chr11_207308_G_C | chr11:207308 | -0.123 | -0.053 | -0.187 | — |
| chr11_207228_G_C | chr11:207228 | -0.121 | -0.030 | -0.094 | — |
| chr11_207037_G_A | chr11:207037 | 0.052 | 0.061 | 0.235 | <0.001% |
| chr11_207040_G_A | chr11:207040 | 0.006 | 0.109 | 0.235 | <0.001% |
| chr11_207049_T_G | chr11:207049 | -0.031 | -0.045 | -0.235 | <0.001% |
| chr11_207177_C_T | chr11:207177 | 0.010 | 0.038 | 0.235 | 0.0039% |
| chr11_207232_G_T | chr11:207232 | -0.119 | 0.023 | -0.164 | — |
| chr11_207251_C_T | chr11:207251 | 0.046 | 0.050 | 0.211 | — |
| chr11_207253_T_C | chr11:207253 | 0.063 | -0.040 | -0.211 | — |
| chr11_207297_G_A | chr11:207297 | -0.088 | -0.038 | -0.211 | — |
| chr11_207299_T_A | chr11:207299 | 0.088 | -0.028 | 0.211 | — |
| chr11_207330_G_C | chr11:207330 | -0.010 | -0.005 | -0.211 | — |
| chr11_207337_C_G | chr11:207337 | -0.012 | 0.048 | 0.211 | — |
| chr11_207366_A_C | chr11:207366 | -0.086 | 0.015 | -0.211 | — |
| chr11_207369_C_G | chr11:207369 | 0.070 | -0.013 | 0.211 | — |
| chr11_207371_C_A | chr11:207371 | 0.066 | 0.040 | 0.211 | — |
| chr11_207378_C_A | chr11:207378 | 0.119 | 0.015 | -0.117 | — |
| chr11_207386_A_G | chr11:207386 | -0.003 | -0.166 | -0.211 | — |
| chr11_207321_T_A | chr11:207321 | 0.118 | 0.023 | 0.117 | — |
| chr11_207325_G_C | chr11:207325 | -0.116 | 0.000 | -0.187 | — |
| chr11_207375_A_C | chr11:207375 | -0.116 | 0.028 | 0.023 | — |
| chr11_192411_T_C | chr11:192411 | 0.069 | 0.044 | 0.224 | <0.001% |
| chr11_207035_G_C | chr11:207035 | 0.031 | 0.048 | 0.222 | <0.001% |
| chr11_207234_G_C | chr11:207234 | -0.113 | -0.020 | -0.140 | — |
| chr11_207351_C_A | chr11:207351 | -0.113 | 0.053 | -0.070 | — |
| chr11_207379_G_A | chr11:207379 | 0.113 | 0.010 | 0.070 | — |
| chr11_207395_G_A | chr11:207395 | 0.113 | -0.030 | -0.164 | — |
| chr11_192141_C_T | chr11:192141 | -0.136 | -0.054 | -0.221 | 0.0033% |
| chr11_189813_C_A | chr11:189813 | 0.048 | 0.037 | 0.216 | <0.001% |
| chr11_192200_G_T | chr11:192200 | 0.124 | 0.069 | 0.216 | 0.0020% |
| chr11_207279_A_G | chr11:207279 | -0.109 | 0.013 | -0.117 | — |
| chr11_207285_C_A | chr11:207285 | 0.109 | 0.020 | 0.164 | — |
| chr11_207315_C_G | chr11:207315 | 0.109 | 0.060 | 0.164 | — |
| chr11_207373_T_G | chr11:207373 | -0.109 | -0.076 | -0.047 | — |
| chr11_192190_G_C | chr11:192190 | -0.117 | -0.086 | -0.212 | <0.001% |
| chr11_207148_T_G | chr11:207148 | 0.045 | 0.083 | 0.209 | <0.001% |
| chr11_207201_G_T | chr11:207201 | -0.054 | -0.073 | -0.209 | 0.0013% |
| chr11_207246_A_G | chr11:207246 | -0.079 | -0.018 | -0.187 | — |
| chr11_207254_C_G | chr11:207254 | -0.093 | -0.073 | -0.187 | — |
| chr11_207263_C_T | chr11:207263 | -0.003 | 0.071 | 0.187 | — |
| chr11_207264_C_T | chr11:207264 | -0.007 | 0.033 | 0.187 | — |
| chr11_207293_C_T | chr11:207293 | 0.035 | 0.028 | 0.187 | 0.0067% |
| chr11_207306_G_T | chr11:207306 | 0.066 | 0.043 | 0.187 | — |
| chr11_207307_A_T | chr11:207307 | 0.015 | 0.058 | 0.187 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.