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NUP54
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near NUP54
chr4:76,014,658..76,248,515, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_76061021_G_T | chr4:76061021 | 0.280 | 0.296 | 0.308 | — |
| chr4_76061061_A_G | chr4:76061061 | 0.174 | 0.049 | 0.183 | — |
| chr4_76061061_A_T | chr4:76061061 | 0.137 | 0.060 | 0.156 | — |
| chr4_76061062_A_C | chr4:76061062 | 0.109 | 0.016 | 0.144 | — |
| chr4_76069152_C_A | chr4:76069152 | 0.108 | -0.065 | 0.021 | — |
| chr4_76061015_G_T | chr4:76061015 | 0.101 | 0.060 | 0.052 | — |
| chr4_76069159_T_C | chr4:76069159 | 0.051 | 0.021 | 0.137 | — |
| chr4_76061046_T_C | chr4:76061046 | 0.072 | 0.044 | 0.101 | — |
| chr4_76069192_T_C | chr4:76069192 | 0.071 | -0.051 | 0.027 | — |
| chr4_76060980_T_G | chr4:76060980 | 0.068 | 0.044 | 0.104 | — |
| chr4_76069200_A_T | chr4:76069200 | 0.042 | 0.027 | 0.122 | — |
| chr4_76061085_C_A | chr4:76061085 | -0.068 | -0.023 | -0.070 | — |
| chr4_76061071_A_T | chr4:76061071 | 0.066 | 0.044 | 0.079 | — |
| chr4_76061076_G_C | chr4:76061076 | 0.065 | 0.042 | 0.027 | — |
| chr4_76069076_A_C | chr4:76069076 | 0.032 | 0.012 | 0.116 | — |
| chr4_76069150_A_G | chr4:76069150 | 0.025 | 0.008 | 0.116 | — |
| chr4_76061045_A_G | chr4:76061045 | 0.064 | 0.036 | 0.107 | — |
| chr4_76061036_G_A | chr4:76061036 | -0.063 | -0.044 | -0.098 | — |
| chr4_76060996_A_C | chr4:76060996 | 0.021 | -0.005 | 0.110 | — |
| chr4_76061031_G_A | chr4:76061031 | -0.062 | -0.042 | -0.070 | — |
| chr4_76069074_A_C | chr4:76069074 | 0.021 | 0.009 | 0.110 | — |
| chr4_76069181_A_C | chr4:76069181 | 0.016 | -0.003 | 0.110 | — |
| chr4_76069091_C_T | chr4:76069091 | 0.061 | -0.022 | 0.052 | — |
| chr4_76060987_A_G | chr4:76060987 | 0.019 | 0.005 | 0.104 | — |
| chr4_76069075_A_C | chr4:76069075 | 0.031 | 0.012 | 0.104 | — |
| chr4_76069124_A_C | chr4:76069124 | 0.054 | 0.043 | 0.104 | — |
| chr4_76069105_T_A | chr4:76069105 | 0.058 | -0.048 | 0.040 | — |
| chr4_76069102_T_G | chr4:76069102 | 0.057 | -0.014 | 0.040 | — |
| chr4_76069174_T_C | chr4:76069174 | 0.006 | 0.000 | 0.101 | — |
| chr4_76061001_T_G | chr4:76061001 | 0.037 | 0.008 | 0.098 | — |
| chr4_76061004_G_T | chr4:76061004 | 0.047 | 0.055 | 0.098 | — |
| chr4_76061026_T_G | chr4:76061026 | 0.055 | 0.031 | 0.095 | — |
| chr4_76061035_A_C | chr4:76061035 | -0.055 | -0.044 | -0.006 | — |
| chr4_76069078_A_G | chr4:76069078 | 0.055 | 0.009 | 0.049 | — |
| chr4_76069083_C_T | chr4:76069083 | 0.002 | -0.018 | -0.098 | — |
| chr4_76069159_T_G | chr4:76069159 | 0.039 | -0.005 | 0.098 | — |
| chr4_76069161_C_T | chr4:76069161 | -0.014 | 0.026 | -0.098 | — |
| chr4_76061032_A_G | chr4:76061032 | -0.054 | -0.029 | -0.006 | — |
| chr4_76061035_A_G | chr4:76061035 | -0.054 | -0.029 | -0.021 | — |
| chr4_76060981_G_C | chr4:76060981 | 0.023 | 0.081 | 0.095 | — |
| chr4_76061033_T_A | chr4:76061033 | -0.053 | -0.039 | -0.037 | — |
| chr4_76069111_T_C | chr4:76069111 | 0.035 | -0.017 | 0.095 | — |
| chr4_76061085_C_T | chr4:76061085 | -0.052 | -0.008 | -0.061 | — |
| chr4_76061091_C_A | chr4:76061091 | -0.052 | -0.018 | -0.076 | — |
| chr4_76061029_A_G | chr4:76061029 | 0.050 | 0.052 | 0.092 | — |
| chr4_76061068_G_C | chr4:76061068 | 0.051 | 0.026 | 0.040 | — |
| chr4_76061017_T_C | chr4:76061017 | 0.050 | 0.029 | 0.043 | — |
| chr4_76061085_C_G | chr4:76061085 | -0.050 | -0.016 | -0.049 | — |
| chr4_76061043_G_A | chr4:76061043 | -0.036 | -0.047 | -0.089 | <0.001% |
| chr4_76061075_T_G | chr4:76061075 | 0.044 | 0.036 | 0.089 | — |
| chr4_76069077_A_T | chr4:76069077 | 0.030 | 0.021 | 0.089 | — |
| chr4_76069079_A_T | chr4:76069079 | -0.010 | 0.043 | 0.089 | <0.001% |
| chr4_76069165_A_C | chr4:76069165 | 0.001 | -0.008 | 0.089 | — |
| chr4_76060991_T_G | chr4:76060991 | 0.043 | 0.034 | 0.085 | — |
| chr4_76061031_G_C | chr4:76061031 | -0.048 | -0.026 | -0.024 | — |
| chr4_76061031_G_T | chr4:76061031 | -0.048 | -0.039 | -0.076 | — |
| chr4_76061043_G_T | chr4:76061043 | 0.048 | 0.018 | 0.015 | — |
| chr4_76069077_A_C | chr4:76069077 | 0.026 | -0.001 | 0.085 | — |
| chr4_76069087_C_A | chr4:76069087 | 0.024 | 0.021 | 0.085 | — |
| chr4_76069148_A_C | chr4:76069148 | 0.013 | -0.005 | 0.085 | — |
| chr4_76061035_A_T | chr4:76061035 | -0.047 | -0.031 | -0.049 | — |
| chr4_76061037_A_G | chr4:76061037 | 0.047 | 0.021 | 0.027 | — |
| chr4_76061083_A_T | chr4:76061083 | -0.047 | -0.016 | -0.043 | — |
| chr4_76061084_A_T | chr4:76061084 | -0.047 | -0.021 | -0.049 | — |
| chr4_76061016_A_T | chr4:76061016 | 0.046 | 0.003 | 0.043 | — |
| chr4_76061041_G_T | chr4:76061041 | -0.044 | -0.031 | -0.082 | 0.0059% |
| chr4_76061053_A_T | chr4:76061053 | 0.046 | 0.049 | 0.064 | — |
| chr4_76061083_A_C | chr4:76061083 | -0.046 | -0.021 | -0.043 | — |
| chr4_76069071_C_A | chr4:76069071 | -0.025 | -0.006 | -0.082 | — |
| chr4_76069071_C_T | chr4:76069071 | -0.029 | -0.001 | -0.082 | — |
| chr4_76069078_A_C | chr4:76069078 | 0.020 | 0.004 | 0.082 | — |
| chr4_76069081_T_G | chr4:76069081 | 0.015 | -0.019 | 0.082 | — |
| chr4_76069113_T_G | chr4:76069113 | 0.011 | -0.006 | 0.082 | — |
| chr4_76061027_T_G | chr4:76061027 | 0.045 | 0.034 | 0.061 | — |
| chr4_76061082_C_A | chr4:76061082 | -0.045 | -0.016 | -0.052 | — |
| chr4_76061007_A_T | chr4:76061007 | 0.044 | 0.044 | 0.079 | — |
| chr4_76061019_T_C | chr4:76061019 | 0.044 | 0.031 | 0.064 | — |
| chr4_76061033_T_C | chr4:76061033 | -0.044 | -0.034 | 0.006 | — |
| chr4_76061033_T_G | chr4:76061033 | -0.044 | -0.036 | -0.006 | — |
| chr4_76061041_G_A | chr4:76061041 | -0.027 | -0.026 | -0.079 | — |
| chr4_76061058_A_G | chr4:76061058 | 0.009 | -0.010 | 0.079 | — |
| chr4_76069147_A_T | chr4:76069147 | 0.032 | 0.023 | 0.079 | — |
| chr4_76069181_A_G | chr4:76069181 | -0.009 | -0.018 | -0.079 | — |
| chr4_76061034_A_C | chr4:76061034 | -0.044 | -0.036 | -0.009 | — |
| chr4_76061034_A_G | chr4:76061034 | -0.044 | -0.036 | -0.003 | — |
| chr4_76061029_A_C | chr4:76061029 | 0.032 | 0.039 | 0.076 | — |
| chr4_76061032_A_C | chr4:76061032 | -0.043 | -0.029 | 0.015 | — |
| chr4_76069084_A_G | chr4:76069084 | 0.018 | -0.003 | 0.076 | — |
| chr4_76069129_A_C | chr4:76069129 | 0.028 | 0.008 | 0.076 | — |
| chr4_76069147_A_C | chr4:76069147 | 0.020 | 0.010 | 0.076 | — |
| chr4_76069153_A_C | chr4:76069153 | -0.008 | 0.016 | 0.076 | — |
| chr4_76069208_T_G | chr4:76069208 | 0.004 | 0.014 | -0.076 | — |
| chr4_76061020_A_C | chr4:76061020 | 0.042 | 0.031 | 0.070 | — |
| chr4_76061032_A_T | chr4:76061032 | -0.042 | -0.031 | -0.018 | — |
| chr4_76061087_G_T | chr4:76061087 | -0.042 | -0.008 | -0.049 | — |
| chr4_76060970_G_C | chr4:76060970 | -0.020 | -0.036 | -0.073 | — |
| chr4_76061037_A_C | chr4:76061037 | 0.038 | 0.018 | 0.073 | — |
| chr4_76061072_G_T | chr4:76061072 | -0.041 | -0.010 | -0.052 | — |
| chr4_76069080_T_G | chr4:76069080 | 0.018 | -0.001 | 0.073 | — |
| chr4_76069114_C_G | chr4:76069114 | -0.009 | 0.017 | -0.073 | — |
| chr4_76069162_C_A | chr4:76069162 | -0.012 | 0.073 | -0.073 | — |
| chr4_76069163_A_G | chr4:76069163 | 0.013 | 0.013 | 0.073 | — |
| chr4_76061077_C_A | chr4:76061077 | -0.040 | -0.013 | -0.046 | — |
| chr4_76060991_T_A | chr4:76060991 | 0.035 | 0.044 | 0.070 | — |
| chr4_76061028_T_C | chr4:76061028 | 0.036 | 0.034 | 0.070 | — |
| chr4_76061028_T_G | chr4:76061028 | 0.032 | 0.031 | 0.070 | — |
| chr4_76061034_A_T | chr4:76061034 | -0.039 | -0.034 | -0.031 | — |
| chr4_76061036_G_T | chr4:76061036 | -0.038 | -0.031 | -0.070 | — |
| chr4_76061091_C_T | chr4:76061091 | -0.021 | 0.010 | -0.070 | — |
| chr4_76069076_A_G | chr4:76069076 | 0.016 | 0.012 | 0.070 | — |
| chr4_76069152_C_T | chr4:76069152 | 0.015 | -0.005 | -0.070 | — |
| chr4_76069154_G_A | chr4:76069154 | 0.016 | 0.036 | 0.070 | — |
| chr4_76069161_C_A | chr4:76069161 | -0.003 | 0.018 | -0.070 | — |
| chr4_76069170_T_C | chr4:76069170 | 0.006 | -0.005 | 0.070 | — |
| chr4_76061050_T_C | chr4:76061050 | 0.038 | -0.005 | 0.021 | — |
| chr4_76061079_C_A | chr4:76061079 | -0.038 | -0.008 | -0.052 | — |
| chr4_76061011_T_C | chr4:76061011 | 0.012 | 0.013 | 0.067 | — |
| chr4_76061072_G_A | chr4:76061072 | -0.038 | -0.005 | -0.052 | — |
| chr4_76061076_G_T | chr4:76061076 | -0.038 | -0.008 | -0.046 | — |
| chr4_76061091_C_G | chr4:76061091 | -0.038 | -0.021 | -0.049 | — |
| chr4_76069075_A_G | chr4:76069075 | 0.021 | 0.012 | 0.067 | 0.022% |
| chr4_76069094_T_C | chr4:76069094 | -0.015 | 0.001 | 0.067 | — |
| chr4_76069123_A_C | chr4:76069123 | 0.029 | 0.010 | 0.067 | — |
| chr4_76069156_G_T | chr4:76069156 | -0.011 | 0.013 | -0.067 | — |
| chr4_76069162_C_T | chr4:76069162 | -0.001 | 0.026 | -0.067 | — |
| chr4_76069201_C_A | chr4:76069201 | -0.028 | -0.010 | -0.067 | — |
| chr4_76060978_T_A | chr4:76060978 | 0.037 | 0.000 | 0.037 | — |
| chr4_76061039_A_C | chr4:76061039 | 0.037 | 0.031 | 0.046 | — |
| chr4_76060971_C_A | chr4:76060971 | -0.016 | -0.010 | -0.064 | — |
| chr4_76060994_A_C | chr4:76060994 | 0.008 | 0.000 | 0.064 | — |
| chr4_76061080_A_C | chr4:76061080 | -0.036 | -0.029 | -0.027 | — |
| chr4_76061082_C_G | chr4:76061082 | -0.036 | -0.010 | -0.043 | — |
| chr4_76069098_A_T | chr4:76069098 | 0.021 | 0.030 | 0.064 | — |
| chr4_76069177_A_C | chr4:76069177 | 0.019 | -0.010 | 0.064 | — |
| chr4_76069203_T_G | chr4:76069203 | -0.035 | -0.003 | -0.049 | — |
| chr4_76061081_G_T | chr4:76061081 | -0.035 | 0.003 | -0.043 | — |
| chr4_76060972_C_A | chr4:76060972 | -0.015 | -0.005 | -0.061 | — |
| chr4_76060984_T_G | chr4:76060984 | 0.034 | 0.031 | 0.037 | — |
| chr4_76061039_A_G | chr4:76061039 | 0.034 | 0.026 | 0.040 | — |
| chr4_76061062_A_G | chr4:76061062 | 0.034 | 0.023 | 0.052 | — |
| chr4_76061080_A_T | chr4:76061080 | -0.034 | -0.010 | -0.031 | — |
| chr4_76069074_A_G | chr4:76069074 | 0.003 | 0.005 | 0.061 | — |
| chr4_76069077_A_G | chr4:76069077 | 0.023 | 0.014 | 0.061 | — |
| chr4_76069097_G_A | chr4:76069097 | -0.013 | 0.010 | -0.061 | 0.580% |
| chr4_76069100_A_G | chr4:76069100 | 0.012 | 0.000 | 0.061 | — |
| chr4_76069134_T_A | chr4:76069134 | -0.034 | 0.009 | -0.024 | — |
| chr4_76069082_A_C | chr4:76069082 | 0.033 | 0.008 | 0.027 | — |
| chr4_76060970_G_T | chr4:76060970 | -0.021 | -0.018 | -0.058 | — |
| chr4_76060979_T_G | chr4:76060979 | 0.020 | 0.003 | 0.058 | — |
| chr4_76060981_G_T | chr4:76060981 | -0.001 | 0.000 | -0.058 | — |
| chr4_76060988_G_A | chr4:76060988 | -0.012 | -0.008 | -0.058 | — |
| chr4_76061026_T_A | chr4:76061026 | 0.032 | 0.034 | 0.052 | — |
| chr4_76061030_A_G | chr4:76061030 | -0.032 | -0.031 | -0.003 | — |
| chr4_76061049_T_G | chr4:76061049 | 0.015 | 0.003 | 0.058 | — |
| chr4_76069079_A_G | chr4:76069079 | 0.011 | -0.006 | 0.058 | — |
| chr4_76069100_A_C | chr4:76069100 | 0.007 | 0.000 | 0.058 | — |
| chr4_76069106_T_A | chr4:76069106 | 0.030 | -0.004 | 0.058 | — |
| chr4_76069174_T_G | chr4:76069174 | 0.032 | -0.006 | -0.006 | — |
| chr4_76069184_A_C | chr4:76069184 | 0.003 | -0.005 | 0.058 | — |
| chr4_76069185_G_A | chr4:76069185 | -0.003 | 0.013 | -0.058 | — |
| chr4_76069199_G_A | chr4:76069199 | -0.007 | 0.000 | -0.058 | — |
| chr4_76069117_G_A | chr4:76069117 | 0.032 | 0.013 | 0.003 | — |
| chr4_76061077_C_T | chr4:76061077 | -0.032 | -0.008 | -0.049 | — |
| chr4_76061097_A_T | chr4:76061097 | -0.032 | -0.026 | -0.040 | — |
| chr4_76069207_G_T | chr4:76069207 | 0.032 | -0.005 | 0.052 | — |
| chr4_76060970_G_A | chr4:76060970 | -0.016 | -0.010 | -0.055 | — |
| chr4_76060996_A_T | chr4:76060996 | 0.027 | 0.018 | 0.055 | — |
| chr4_76061044_T_C | chr4:76061044 | -0.031 | -0.013 | 0.024 | — |
| chr4_76061052_T_G | chr4:76061052 | -0.031 | -0.031 | 0.000 | — |
| chr4_76061053_A_C | chr4:76061053 | -0.031 | -0.016 | -0.003 | — |
| chr4_76061058_A_C | chr4:76061058 | -0.029 | -0.029 | -0.055 | <0.001% |
| chr4_76061065_C_T | chr4:76061065 | -0.019 | -0.008 | -0.055 | — |
| chr4_76069106_T_C | chr4:76069106 | 0.014 | 0.001 | 0.055 | — |
| chr4_76069107_A_G | chr4:76069107 | 0.009 | -0.008 | 0.055 | — |
| chr4_76069148_A_T | chr4:76069148 | 0.014 | 0.004 | 0.055 | — |
| chr4_76069206_G_C | chr4:76069206 | 0.005 | 0.012 | 0.055 | — |
| chr4_76165850_A_C | chr4:76165850 | 0.003 | 0.003 | 0.055 | — |
| chr4_76061053_A_G | chr4:76061053 | -0.030 | -0.026 | -0.003 | — |
| chr4_76061055_G_A | chr4:76061055 | -0.030 | -0.029 | -0.037 | — |
| chr4_76061055_G_T | chr4:76061055 | -0.030 | -0.021 | -0.046 | — |
| chr4_76061067_T_G | chr4:76061067 | -0.030 | -0.016 | -0.009 | — |
| chr4_76165854_T_A | chr4:76165854 | 0.002 | 0.021 | 0.053 | — |
| chr4_76060960_A_G | chr4:76060960 | 0.010 | 0.008 | 0.052 | — |
| chr4_76060962_T_G | chr4:76060962 | -0.003 | -0.008 | 0.052 | <0.001% |
| chr4_76060966_C_G | chr4:76060966 | 0.013 | 0.005 | 0.052 | — |
| chr4_76060993_C_T | chr4:76060993 | -0.021 | -0.016 | -0.052 | — |
| chr4_76061079_C_G | chr4:76061079 | -0.029 | -0.005 | -0.040 | — |
| chr4_76069073_T_A | chr4:76069073 | -0.029 | -0.010 | -0.027 | — |
| chr4_76069076_A_T | chr4:76069076 | 0.018 | 0.016 | 0.052 | — |
| chr4_76069082_A_T | chr4:76069082 | -0.009 | -0.005 | -0.052 | — |
| chr4_76069093_G_A | chr4:76069093 | -0.012 | -0.005 | -0.052 | 0.0020% |
| chr4_76069096_T_C | chr4:76069096 | -0.000 | -0.008 | 0.052 | — |
| chr4_76069115_A_T | chr4:76069115 | -0.012 | -0.010 | -0.052 | — |
| chr4_76069143_G_A | chr4:76069143 | 0.002 | 0.010 | -0.052 | — |
| chr4_76069148_A_G | chr4:76069148 | 0.005 | 0.009 | 0.052 | — |
| chr4_76069153_A_G | chr4:76069153 | -0.003 | -0.003 | 0.052 | — |
| chr4_76069156_G_A | chr4:76069156 | -0.007 | 0.008 | -0.052 | — |
| chr4_76069158_C_A | chr4:76069158 | 0.005 | 0.034 | -0.052 | — |
| chr4_76069172_G_C | chr4:76069172 | 0.003 | -0.006 | 0.052 | — |
| chr4_76069189_G_T | chr4:76069189 | -0.002 | -0.005 | -0.052 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.