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PDCD6

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PDCD6

chr5:171,620..414,974, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr5_263834_T_G	chr5:263834	-1.000	-1.000	-1.000	0.0013%
chr5_263850_G_T	chr5:263850	-1.000	-1.000	-1.000	<0.001%
chr5_263828_G_A	chr5:263828	-1.000	-1.000	-1.000	<0.001%
chr5_218273_T_C	chr5:218273	-1.000	-0.502	-1.000	0.018%
chr5_263861_A_G	chr5:263861	-0.901	-1.000	-0.856	0.0013%
chr5_263837_C_A	chr5:263837	-0.812	-1.000	-1.000	<0.001%
chr5_218364_G_T	chr5:218364	0.742	0.157	0.418	0.0013%
chr5_263652_G_A	chr5:263652	0.464	0.997	1.000	<0.001%
chr5_263805_T_G	chr5:263805	0.736	1.000	0.804	<0.001%
chr5_218461_A_G	chr5:218461	-0.254	-0.281	-1.000	<0.001%
chr5_217684_C_A	chr5:217684	0.699	0.128	0.301	<0.001%
chr5_218829_T_G	chr5:218829	0.647	0.569	1.000	<0.001%
chr5_263890_T_G	chr5:263890	-0.658	-0.792	-0.614	0.0013%
chr5_218451_G_T	chr5:218451	0.111	0.286	1.000	<0.001%
chr5_218211_G_A	chr5:218211	-0.027	0.121	1.000	0.0020%
chr5_198347_C_T	chr5:198347	0.359	0.414	0.993	<0.001%
chr5_188823_T_C	chr5:188823	0.340	0.048	0.967	<0.001%
chr5_218924_C_G	chr5:218924	0.008	-0.367	-0.967	<0.001%
chr5_218462_G_A	chr5:218462	0.095	0.259	0.954	<0.001%
chr5_218467_C_T	chr5:218467	-0.006	0.240	0.954	<0.001%
chr5_218445_G_A	chr5:218445	0.049	0.305	0.941	<0.001%
chr5_188710_G_C	chr5:188710	-0.579	-0.077	-0.719	0.0020%
chr5_218468_G_A	chr5:218468	0.062	0.227	0.902	<0.001%
chr5_218277_C_G	chr5:218277	-0.520	0.102	0.144	<0.001%
chr5_218278_C_T	chr5:218278	-0.520	0.176	0.392	<0.001%
chr5_218457_G_A	chr5:218457	0.097	0.208	0.824	0.0013%
chr5_218271_C_T	chr5:218271	-0.515	0.105	0.353	0.0013%
chr5_263804_A_G	chr5:263804	0.515	0.626	0.569	<0.001%
chr5_218471_A_G	chr5:218471	-0.130	-0.185	-0.810	<0.001%
chr5_218365_G_T	chr5:218365	0.478	0.246	0.562	<0.001%
chr5_218275_C_T	chr5:218275	-0.476	0.179	0.379	0.020%
chr5_188768_A_G	chr5:188768	-0.475	-0.184	-0.497	<0.001%
chr5_217969_C_T	chr5:217969	0.435	0.045	0.745	0.0013%
chr5_218459_C_T	chr5:218459	0.006	0.179	0.732	0.0033%
chr5_263877_A_G	chr5:263877	0.458	0.537	0.471	<0.001%
chr5_263752_C_T	chr5:263752	-0.447	-0.556	-0.719	0.0020%
chr5_217940_C_T	chr5:217940	0.000	0.256	0.712	0.0013%
chr5_218276_C_G	chr5:218276	-0.443	0.022	0.118	0.0013%
chr5_188643_G_A	chr5:188643	0.439	0.086	0.235	<0.001%
chr5_218277_C_T	chr5:218277	-0.439	0.176	0.327	<0.001%
chr5_218234_G_C	chr5:218234	-0.435	-0.089	-0.523	<0.001%
chr5_188690_G_A	chr5:188690	-0.396	-0.120	-0.680	0.0053%
chr5_188693_G_C	chr5:188693	-0.414	-0.030	-0.549	<0.001%
chr5_218828_C_G	chr5:218828	-0.301	-0.265	-0.641	<0.001%
chr5_263887_G_A	chr5:263887	-0.402	-0.610	-0.510	<0.001%
chr5_263810_C_T	chr5:263810	-0.392	-0.173	-0.314	0.0013%
chr5_263855_C_T	chr5:263855	-0.390	-0.623	-0.556	0.0013%
chr5_218477_G_T	chr5:218477	0.097	0.179	0.601	<0.001%
chr5_218483_G_A	chr5:218483	0.010	0.144	0.601	38.6%
chr5_263723_T_C	chr5:263723	0.375	0.479	0.392	0.217%
chr5_218406_G_A	chr5:218406	-0.039	0.185	0.588	0.0046%
chr5_263889_C_A	chr5:263889	-0.239	-0.684	-0.582	<0.001%
chr5_188710_G_A	chr5:188710	-0.336	-0.105	-0.562	0.0020%
chr5_217981_T_C	chr5:217981	-0.101	-0.058	-0.562	0.0013%
chr5_263730_G_A	chr5:263730	-0.351	-0.607	-0.510	<0.001%
chr5_218338_G_C	chr5:218338	0.254	0.214	0.549	0.0013%
chr5_218144_G_T	chr5:218144	0.107	0.083	0.536	0.243%
chr5_217898_A_C	chr5:217898	0.134	0.157	0.529	<0.001%
chr5_218107_G_A	chr5:218107	0.235	0.112	0.523	0.0020%
chr5_218272_C_T	chr5:218272	-0.330	0.073	0.275	0.0013%
chr5_218443_C_T	chr5:218443	-0.023	0.160	0.523	<0.001%
chr5_218285_T_C	chr5:218285	-0.249	-0.297	-0.510	0.0013%
chr5_218833_C_T	chr5:218833	-0.192	-0.150	-0.510	0.097%
chr5_263818_T_C	chr5:263818	0.056	0.435	0.510	0.0013%
chr5_188821_G_C	chr5:188821	0.068	-0.011	0.497	<0.001%
chr5_217873_A_G	chr5:217873	0.181	0.224	0.497	74.2%
chr5_218370_G_A	chr5:218370	0.254	0.147	0.497	<0.001%
chr5_218367_C_T	chr5:218367	0.311	0.236	0.418	<0.001%
chr5_188824_G_A	chr5:188824	0.111	0.048	0.484	0.0013%
chr5_217682_C_T	chr5:217682	-0.196	-0.035	-0.484	<0.001%
chr5_218380_C_T	chr5:218380	-0.043	0.153	0.484	<0.001%
chr5_188738_C_G	chr5:188738	0.301	0.037	0.261	<0.001%
chr5_263818_T_G	chr5:263818	0.223	0.601	0.477	<0.001%
chr5_218377_T_C	chr5:218377	-0.054	-0.158	-0.471	0.0013%
chr5_263502_C_T	chr5:263502	-0.063	-0.204	-0.464	0.0039%
chr5_263758_T_C	chr5:263758	-0.289	-0.316	-0.301	<0.001%
chr5_263815_G_T	chr5:263815	-0.287	-0.275	-0.216	0.0020%
chr5_263865_A_T	chr5:263865	-0.285	-0.364	-0.242	<0.001%
chr5_263677_C_T	chr5:263677	-0.282	-0.077	-0.111	<0.001%
chr5_218481_C_T	chr5:218481	-0.010	0.096	0.444	0.018%
chr5_263806_C_T	chr5:263806	0.280	0.428	0.373	0.0013%
chr5_218331_G_A	chr5:218331	0.276	0.121	0.353	<0.001%
chr5_218348_C_A	chr5:218348	-0.272	-0.019	-0.157	<0.001%
chr5_218486_C_T	chr5:218486	0.082	0.093	0.431	<0.001%
chr5_218492_G_A	chr5:218492	0.014	0.125	0.431	<0.001%
chr5_263860_A_C	chr5:263860	-0.272	-0.383	-0.222	<0.001%
chr5_263857_T_C	chr5:263857	-0.268	-0.300	-0.366	<0.001%
chr5_218156_G_A	chr5:218156	-0.256	-0.275	0.418	<0.001%
chr5_218409_G_T	chr5:218409	0.074	0.128	0.418	<0.001%
chr5_218336_G_A	chr5:218336	0.091	0.153	0.405	<0.001%
chr5_218896_G_T	chr5:218896	0.080	0.169	0.405	<0.001%
chr5_263487_C_G	chr5:263487	0.016	0.281	0.399	0.0013%
chr5_217968_C_G	chr5:217968	0.033	0.182	0.392	0.0039%
chr5_218223_A_C	chr5:218223	-0.062	-0.080	-0.392	<0.001%
chr5_218291_C_T	chr5:218291	0.247	0.029	0.118	0.0013%
chr5_218309_G_A	chr5:218309	-0.175	0.046	0.392	0.0026%
chr5_218903_G_A	chr5:218903	0.029	0.137	0.392	<0.001%
chr5_263895_T_C	chr5:263895	0.243	0.454	0.203	<0.001%
chr5_218911_G_A	chr5:218911	-0.239	-0.080	0.000	0.0013%
chr5_188645_G_A	chr5:188645	0.233	0.056	0.000	0.0013%
chr5_188670_G_A	chr5:188670	-0.231	-0.056	-0.366	<0.001%
chr5_188821_G_A	chr5:188821	0.085	0.058	0.366	0.0013%
chr5_188852_T_G	chr5:188852	0.033	0.029	0.366	0.0020%
chr5_218194_T_G	chr5:218194	-0.060	-0.073	-0.366	<0.001%
chr5_218373_C_T	chr5:218373	-0.231	0.013	0.118	0.0020%
chr5_218061_C_T	chr5:218061	0.229	0.067	0.078	<0.001%
chr5_250490_G_A	chr5:250490	-0.058	-0.045	-0.356	0.0059%
chr5_188714_C_G	chr5:188714	-0.198	-0.110	-0.353	0.0013%
chr5_188812_A_G	chr5:188812	0.103	-0.013	0.353	0.0013%
chr5_188820_C_T	chr5:188820	-0.212	-0.021	-0.353	0.0026%
chr5_218372_G_A	chr5:218372	0.113	0.188	0.353	0.543%
chr5_250481_G_A	chr5:250481	0.124	0.045	0.343	0.0020%
chr5_217968_C_A	chr5:217968	0.008	0.169	0.340	0.223%
chr5_218342_C_T	chr5:218342	0.019	0.125	0.340	0.0033%
chr5_218371_G_A	chr5:218371	0.052	0.061	0.340	0.0020%
chr5_218759_A_T	chr5:218759	-0.214	-0.220	-0.314	0.0020%
chr5_219238_G_C	chr5:219238	0.097	0.070	0.333	0.025%
chr5_188642_A_G	chr5:188642	-0.208	-0.029	-0.261	<0.001%
chr5_188820_C_A	chr5:188820	-0.138	-0.006	-0.327	0.0013%
chr5_198522_A_C	chr5:198522	0.142	0.067	0.327	<0.001%
chr5_217948_C_T	chr5:217948	0.169	0.141	0.327	0.049%
chr5_218260_G_C	chr5:218260	-0.056	0.093	0.327	0.0021%
chr5_218505_G_A	chr5:218505	0.027	0.077	0.327	0.037%
chr5_218644_G_A	chr5:218644	0.206	0.409	0.170	<0.001%
chr5_218844_C_G	chr5:218844	-0.064	-0.102	-0.327	<0.001%
chr5_218853_G_C	chr5:218853	0.204	0.013	0.170	0.0020%
chr5_217961_G_A	chr5:217961	-0.161	-0.077	-0.320	<0.001%
chr5_218279_G_A	chr5:218279	0.202	0.067	0.275	0.0079%
chr5_218355_C_G	chr5:218355	-0.202	-0.109	-0.196	0.0033%
chr5_219213_T_G	chr5:219213	-0.202	-0.163	0.131	24.1%
chr5_188598_C_T	chr5:188598	-0.201	-0.065	-0.261	0.0033%
chr5_218266_T_C	chr5:218266	-0.200	-0.089	-0.288	0.0013%
chr5_188700_C_T	chr5:188700	-0.159	-0.061	-0.314	<0.001%
chr5_218270_C_T	chr5:218270	-0.192	0.093	0.314	0.0020%
chr5_218831_G_A	chr5:218831	-0.142	-0.073	-0.314	0.0020%
chr5_218907_G_A	chr5:218907	0.097	0.077	0.314	34.3%
chr5_188633_G_A	chr5:188633	-0.192	-0.035	-0.235	0.0033%
chr5_188913_G_C	chr5:188913	0.082	0.037	0.301	0.012%
chr5_188921_C_A	chr5:188921	-0.120	0.018	-0.301	0.0020%
chr5_198425_C_T	chr5:198425	0.134	0.080	0.301	0.0033%
chr5_218220_C_T	chr5:218220	0.138	0.073	0.301	<0.001%
chr5_218340_G_T	chr5:218340	0.120	0.141	0.301	0.0013%
chr5_218734_C_T	chr5:218734	0.190	0.144	0.131	0.0026%
chr5_218912_C_T	chr5:218912	0.056	0.029	0.301	0.0020%
chr5_263783_C_G	chr5:263783	-0.190	-0.230	-0.131	<0.001%
chr5_218328_G_C	chr5:218328	0.188	0.118	0.288	<0.001%
chr5_218905_G_C	chr5:218905	0.188	0.105	0.222	<0.001%
chr5_263784_A_C	chr5:263784	0.188	0.326	0.268	<0.001%
chr5_217959_G_A	chr5:217959	-0.118	0.000	-0.294	0.0013%
chr5_263816_T_C	chr5:263816	0.144	0.307	0.294	<0.001%
chr5_263913_G_A	chr5:263913	-0.186	-0.281	-0.163	0.272%
chr5_188796_C_G	chr5:188796	-0.181	-0.014	-0.131	<0.001%
chr5_188947_C_T	chr5:188947	-0.060	0.032	-0.288	<0.001%
chr5_218338_G_T	chr5:218338	0.027	0.080	0.288	0.0013%
chr5_218501_C_T	chr5:218501	-0.004	0.083	0.288	0.0013%
chr5_218921_G_A	chr5:218921	0.080	0.080	0.288	0.0013%
chr5_263680_G_T	chr5:263680	-0.181	-0.153	-0.098	<0.001%
chr5_188640_T_C	chr5:188640	0.177	0.021	0.013	0.0033%
chr5_188760_G_T	chr5:188760	0.177	0.034	0.157	0.019%
chr5_217688_G_T	chr5:217688	-0.142	-0.058	-0.281	0.0020%
chr5_217927_G_A	chr5:217927	-0.169	-0.032	-0.281	<0.001%
chr5_219181_G_T	chr5:219181	0.167	0.284	0.281	<0.001%
chr5_218183_C_T	chr5:218183	0.175	0.118	0.209	<0.001%
chr5_188838_C_A	chr5:188838	0.120	0.008	0.275	<0.001%
chr5_218333_A_G	chr5:218333	-0.173	-0.153	-0.170	<0.001%
chr5_218355_C_T	chr5:218355	-0.173	0.003	0.131	0.0033%
chr5_197996_C_T	chr5:197996	0.038	0.077	0.270	0.0020%
chr5_188744_G_A	chr5:188744	-0.169	-0.045	-0.118	<0.001%
chr5_218857_G_T	chr5:218857	-0.169	-0.153	-0.196	<0.001%
chr5_263498_C_T	chr5:263498	-0.057	-0.083	-0.268	<0.001%
chr5_217924_G_A	chr5:217924	0.167	0.208	0.085	0.0013%
chr5_188698_C_T	chr5:188698	-0.072	-0.048	-0.261	0.0053%
chr5_188704_G_A	chr5:188704	-0.157	-0.019	-0.261	<0.001%
chr5_188835_G_A	chr5:188835	-0.054	0.029	-0.261	0.0013%
chr5_188871_C_G	chr5:188871	0.165	0.003	0.196	<0.001%
chr5_217941_C_T	chr5:217941	-0.031	0.086	0.261	0.0020%
chr5_218252_G_A	chr5:218252	0.068	0.125	0.261	0.011%
chr5_218373_C_A	chr5:218373	-0.118	0.045	0.261	0.0013%
chr5_218378_C_G	chr5:218378	-0.165	-0.026	-0.052	<0.001%
chr5_263609_C_T	chr5:263609	-0.068	-0.157	-0.261	0.038%
chr5_263714_C_T	chr5:263714	-0.099	-0.026	-0.261	0.035%
chr5_188948_G_A	chr5:188948	-0.163	0.050	-0.222	0.0033%
chr5_188735_T_G	chr5:188735	-0.161	-0.016	0.026	0.240%
chr5_218884_G_A	chr5:218884	-0.161	0.051	-0.065	<0.001%
chr5_263388_G_A	chr5:263388	-0.033	-0.029	-0.255	0.026%
chr5_218374_C_T	chr5:218374	-0.159	0.013	0.078	<0.001%
chr5_250526_C_T	chr5:250526	-0.039	-0.032	-0.252	0.0085%
chr5_188777_C_T	chr5:188777	-0.157	-0.048	-0.144	0.0072%
chr5_188944_C_G	chr5:188944	-0.097	0.024	-0.248	<0.001%
chr5_217651_T_C	chr5:217651	0.070	0.000	0.248	<0.001%
chr5_217678_C_A	chr5:217678	-0.070	-0.019	-0.248	<0.001%
chr5_217878_C_A	chr5:217878	-0.109	-0.134	-0.248	0.0020%
chr5_218128_A_T	chr5:218128	0.157	0.166	0.105	<0.001%
chr5_218280_C_T	chr5:218280	-0.068	0.144	0.248	<0.001%
chr5_218341_G_A	chr5:218341	0.085	0.083	0.248	<0.001%
chr5_218518_C_T	chr5:218518	0.021	0.054	0.248	0.0053%
chr5_218813_G_A	chr5:218813	0.111	0.192	0.248	<0.001%
chr5_218915_G_C	chr5:218915	0.130	0.195	0.248	0.0033%
chr5_263398_T_C	chr5:263398	0.005	0.054	0.248	22.3%
chr5_188948_G_C	chr5:188948	-0.153	0.026	-0.222	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.