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PDE6B

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PDE6B

chr4:525,572..770,782, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr4_577660_G_T	chr4:577660	-0.096	-0.040	-1.000	0.0059%
chr4_577664_C_T	chr4:577664	-0.152	-0.105	-1.000	0.0026%
chr4_577663_T_A	chr4:577663	-0.156	-0.104	-1.000	<0.001%
chr4_577662_C_T	chr4:577662	-0.113	-0.072	-1.000	<0.001%
chr4_577664_C_A	chr4:577664	-0.124	-0.105	-1.000	<0.001%
chr4_577658_A_G	chr4:577658	-0.085	-0.050	-0.830	0.0039%
chr4_577473_G_T	chr4:577473	0.074	0.196	0.745	0.0026%
chr4_577677_A_G	chr4:577677	0.199	0.086	0.693	0.841%
chr4_577456_G_C	chr4:577456	0.052	0.155	0.667	<0.001%
chr4_577577_G_A	chr4:577577	-0.066	-0.016	-0.516	0.0013%
chr4_577469_G_C	chr4:577469	0.042	0.093	0.438	0.0013%
chr4_577553_G_A	chr4:577553	-0.074	-0.024	-0.431	0.0013%
chr4_577572_G_A	chr4:577572	-0.037	-0.021	-0.418	0.011%
chr4_577553_G_T	chr4:577553	-0.062	-0.022	-0.412	<0.001%
chr4_577685_C_T	chr4:577685	0.041	0.006	0.405	<0.001%
chr4_579081_C_G	chr4:579081	0.097	0.121	0.405	<0.001%
chr4_582086_A_G	chr4:582086	-0.089	-0.115	-0.395	<0.001%
chr4_577448_A_G	chr4:577448	-0.042	-0.102	-0.392	<0.001%
chr4_577561_G_A	chr4:577561	-0.068	-0.042	-0.392	0.023%
chr4_577646_G_A	chr4:577646	-0.007	0.019	-0.392	<0.001%
chr4_577572_G_T	chr4:577572	-0.041	-0.016	-0.373	0.0039%
chr4_578928_T_C	chr4:578928	-0.027	-0.169	-0.373	0.0039%
chr4_577474_G_A	chr4:577474	0.000	0.128	0.366	<0.001%
chr4_577495_G_C	chr4:577495	0.027	0.067	0.366	<0.001%
chr4_577709_C_A	chr4:577709	-0.057	-0.003	0.353	0.0046%
chr4_577623_C_T	chr4:577623	0.005	0.016	0.340	<0.001%
chr4_577468_C_T	chr4:577468	0.030	0.089	0.333	0.0039%
chr4_577701_G_A	chr4:577701	0.009	0.064	0.320	<0.001%
chr4_577572_G_C	chr4:577572	-0.020	-0.006	-0.301	<0.001%
chr4_577631_C_T	chr4:577631	0.002	-0.040	-0.301	<0.001%
chr4_581651_C_T	chr4:581651	-0.099	-0.118	-0.291	<0.001%
chr4_577755_G_T	chr4:577755	0.021	0.008	-0.275	<0.001%
chr4_532869_C_G	chr4:532869	-0.018	-0.065	-0.271	0.013%
chr4_582026_G_C	chr4:582026	-0.042	-0.201	-0.271	<0.001%
chr4_577562_G_A	chr4:577562	-0.061	-0.022	-0.268	0.0026%
chr4_577669_T_A	chr4:577669	-0.025	-0.021	-0.268	<0.001%
chr4_577702_C_A	chr4:577702	-0.033	0.008	-0.261	<0.001%
chr4_577774_C_T	chr4:577774	0.013	0.008	-0.255	<0.001%
chr4_577514_G_T	chr4:577514	0.001	-0.008	-0.248	<0.001%
chr4_577607_C_T	chr4:577607	0.047	0.032	0.248	<0.001%
chr4_577809_C_T	chr4:577809	-0.064	0.002	-0.248	0.0059%
chr4_578921_G_C	chr4:578921	-0.028	-0.078	-0.248	<0.001%
chr4_577570_C_G	chr4:577570	-0.005	-0.011	-0.242	<0.001%
chr4_581688_C_T	chr4:581688	0.054	0.026	0.242	<0.001%
chr4_577479_G_A	chr4:577479	0.033	0.091	0.229	<0.001%
chr4_577721_C_T	chr4:577721	-0.014	-0.010	-0.229	<0.001%
chr4_577579_C_A	chr4:577579	0.047	0.077	0.222	<0.001%
chr4_577741_C_T	chr4:577741	-0.028	-0.018	-0.216	<0.001%
chr4_577779_G_A	chr4:577779	-0.016	0.006	-0.216	0.0013%
chr4_577651_G_A	chr4:577651	0.014	0.002	0.209	0.0026%
chr4_577747_G_T	chr4:577747	0.039	0.024	-0.209	<0.001%
chr4_577574_A_G	chr4:577574	-0.012	-0.005	-0.203	0.0059%
chr4_577627_T_C	chr4:577627	0.005	-0.006	0.203	<0.001%
chr4_532897_A_G	chr4:532897	-0.024	-0.073	-0.196	0.0020%
chr4_532919_G_A	chr4:532919	-0.034	0.005	0.196	<0.001%
chr4_533048_G_A	chr4:533048	0.022	0.021	0.196	<0.001%
chr4_532918_A_G	chr4:532918	-0.007	-0.059	-0.190	<0.001%
chr4_577485_T_C	chr4:577485	-0.030	-0.016	-0.190	<0.001%
chr4_577799_C_G	chr4:577799	-0.081	-0.037	-0.190	<0.001%
chr4_577851_A_C	chr4:577851	0.031	0.026	0.176	<0.001%
chr4_581686_C_T	chr4:581686	0.046	0.038	0.173	0.0013%
chr4_577781_C_A	chr4:577781	0.038	0.014	0.170	0.014%
chr4_570184_G_A	chr4:570184	-0.011	0.030	-0.163	0.0053%
chr4_577771_G_A	chr4:577771	-0.013	0.040	0.163	<0.001%
chr4_577812_G_T	chr4:577812	-0.058	0.005	-0.163	0.0013%
chr4_582031_C_T	chr4:582031	-0.051	-0.125	-0.163	<0.001%
chr4_577480_G_C	chr4:577480	0.003	0.046	0.157	<0.001%
chr4_577634_C_T	chr4:577634	-0.006	-0.008	-0.157	0.0039%
chr4_581687_C_A	chr4:581687	0.041	0.051	0.157	0.0092%
chr4_582137_T_C	chr4:582137	0.095	0.188	0.157	<0.001%
chr4_560887_G_T	chr4:560887	-0.097	0.081	0.105	<0.001%
chr4_581690_C_G	chr4:581690	0.026	-0.016	0.154	0.0013%
chr4_532923_G_T	chr4:532923	0.026	0.021	0.144	<0.001%
chr4_577599_C_T	chr4:577599	-0.022	0.026	-0.144	<0.001%
chr4_577835_C_T	chr4:577835	0.014	0.008	0.144	0.0013%
chr4_577850_G_T	chr4:577850	-0.019	-0.003	0.144	0.0079%
chr4_579127_C_T	chr4:579127	-0.080	-0.048	-0.144	0.0020%
chr4_581984_T_C	chr4:581984	0.047	0.077	0.141	0.0013%
chr4_570183_C_T	chr4:570183	-0.002	0.011	-0.137	<0.001%
chr4_577582_C_T	chr4:577582	0.014	0.030	0.137	0.0013%
chr4_577589_G_T	chr4:577589	0.007	0.022	-0.137	<0.001%
chr4_577726_A_T	chr4:577726	0.007	-0.006	-0.137	<0.001%
chr4_532974_A_G	chr4:532974	-0.011	-0.043	-0.131	<0.001%
chr4_532981_A_G	chr4:532981	-0.009	-0.040	-0.131	<0.001%
chr4_533044_A_T	chr4:533044	0.006	-0.010	0.131	<0.001%
chr4_582034_T_A	chr4:582034	-0.008	-0.077	-0.131	0.060%
chr4_582144_T_C	chr4:582144	0.079	0.134	0.098	0.0039%
chr4_532916_A_G	chr4:532916	-0.008	-0.035	-0.124	0.030%
chr4_532926_C_T	chr4:532926	-0.023	-0.011	-0.124	<0.001%
chr4_533006_A_G	chr4:533006	-0.008	-0.002	-0.124	0.0030%
chr4_560792_G_T	chr4:560792	0.073	-0.003	-0.124	<0.001%
chr4_570223_A_T	chr4:570223	0.000	0.032	0.124	<0.001%
chr4_577607_C_G	chr4:577607	0.013	-0.024	-0.124	0.0046%
chr4_577700_C_A	chr4:577700	-0.008	0.021	0.124	<0.001%
chr4_560924_A_G	chr4:560924	-0.078	-0.034	0.007	0.0013%
chr4_532898_G_A	chr4:532898	-0.047	0.003	-0.118	<0.001%
chr4_577515_C_T	chr4:577515	0.009	0.000	-0.118	<0.001%
chr4_577529_G_A	chr4:577529	0.004	0.002	-0.118	0.0033%
chr4_577592_G_A	chr4:577592	-0.001	-0.002	-0.118	0.0020%
chr4_578991_G_T	chr4:578991	-0.020	-0.019	-0.118	0.0020%
chr4_581919_A_G	chr4:581919	0.049	0.086	0.118	0.0013%
chr4_581962_C_A	chr4:581962	0.012	-0.105	-0.118	<0.001%
chr4_581946_G_T	chr4:581946	-0.020	-0.089	-0.114	<0.001%
chr4_532879_C_T	chr4:532879	-0.003	-0.005	-0.111	<0.001%
chr4_532924_G_T	chr4:532924	0.024	0.022	0.111	<0.001%
chr4_577502_C_T	chr4:577502	-0.016	-0.032	-0.111	0.0013%
chr4_577550_T_C	chr4:577550	0.006	0.005	0.111	0.0026%
chr4_577638_G_A	chr4:577638	0.005	0.038	0.111	<0.001%
chr4_602511_G_T	chr4:602511	-0.012	-0.005	-0.111	0.0026%
chr4_560792_G_A	chr4:560792	0.069	0.000	-0.098	0.0013%
chr4_560794_G_A	chr4:560794	0.068	0.003	-0.046	0.0053%
chr4_581878_A_G	chr4:581878	0.000	-0.010	0.108	0.0026%
chr4_532986_G_T	chr4:532986	0.020	0.003	0.105	<0.001%
chr4_570183_C_G	chr4:570183	-0.015	-0.026	-0.105	<0.001%
chr4_560765_C_A	chr4:560765	-0.064	-0.016	-0.042	0.043%
chr4_560890_G_A	chr4:560890	-0.063	0.051	0.000	0.0020%
chr4_560891_G_T	chr4:560891	0.031	0.040	0.098	<0.001%
chr4_577870_T_C	chr4:577870	0.024	-0.011	0.098	0.0013%
chr4_579048_C_T	chr4:579048	0.023	0.042	0.098	<0.001%
chr4_581879_T_G	chr4:581879	-0.059	-0.070	-0.042	<0.001%
chr4_582158_T_C	chr4:582158	-0.059	-0.088	-0.041	<0.001%
chr4_579121_G_C	chr4:579121	0.058	0.021	0.078	0.012%
chr4_581816_C_T	chr4:581816	-0.015	-0.026	-0.092	0.0026%
chr4_581925_T_C	chr4:581925	-0.043	-0.129	-0.092	<0.001%
chr4_582054_G_T	chr4:582054	-0.022	-0.129	-0.092	0.0013%
chr4_582181_G_A	chr4:582181	-0.010	-0.014	-0.090	<0.001%
chr4_560991_G_A	chr4:560991	0.000	0.002	-0.088	0.020%
chr4_581638_C_T	chr4:581638	-0.009	0.000	-0.088	<0.001%
chr4_581683_A_G	chr4:581683	0.020	0.013	0.088	0.0013%
chr4_581709_C_T	chr4:581709	-0.035	-0.022	-0.088	0.011%
chr4_581923_G_A	chr4:581923	-0.012	-0.042	-0.088	0.0099%
chr4_581983_A_G	chr4:581983	0.052	0.089	0.088	<0.001%
chr4_532953_A_G	chr4:532953	-0.005	-0.019	-0.085	<0.001%
chr4_560798_C_A	chr4:560798	0.021	0.026	-0.085	<0.001%
chr4_570072_G_A	chr4:570072	0.021	0.024	0.085	0.0020%
chr4_570111_C_G	chr4:570111	-0.003	0.008	0.085	<0.001%
chr4_570178_C_T	chr4:570178	0.037	-0.022	0.085	2.40%
chr4_577635_G_C	chr4:577635	0.014	0.019	-0.085	<0.001%
chr4_577761_C_T	chr4:577761	0.021	0.010	-0.085	0.0013%
chr4_578833_G_T	chr4:578833	0.016	0.002	-0.085	<0.001%
chr4_581910_T_C	chr4:581910	-0.053	-0.064	-0.085	<0.001%
chr4_582158_T_G	chr4:582158	0.022	0.144	0.083	0.0020%
chr4_581969_G_T	chr4:581969	0.051	0.029	-0.013	0.0020%
chr4_533031_T_G	chr4:533031	0.005	0.006	0.078	0.0014%
chr4_570250_C_T	chr4:570250	-0.002	0.006	-0.078	0.731%
chr4_577638_G_T	chr4:577638	0.009	0.011	0.078	<0.001%
chr4_577698_T_C	chr4:577698	0.036	0.003	0.078	0.0039%
chr4_577854_G_A	chr4:577854	0.018	0.011	-0.078	0.014%
chr4_581773_A_G	chr4:581773	0.002	0.013	0.078	0.0013%
chr4_560810_T_C	chr4:560810	-0.048	0.002	0.003	<0.001%
chr4_577688_T_G	chr4:577688	0.048	0.011	-0.072	0.0013%
chr4_577768_A_G	chr4:577768	-0.048	-0.045	0.013	0.0026%
chr4_560807_G_T	chr4:560807	0.016	0.003	-0.075	0.0013%
chr4_560861_G_A	chr4:560861	0.042	0.058	0.075	0.0013%
chr4_560862_G_A	chr4:560862	0.029	0.054	0.075	<0.001%
chr4_581914_C_T	chr4:581914	-0.023	-0.035	-0.075	<0.001%
chr4_532945_G_A	chr4:532945	-0.008	0.008	-0.072	<0.001%
chr4_569980_A_G	chr4:569980	0.001	0.000	0.072	<0.001%
chr4_569993_C_A	chr4:569993	0.008	-0.003	-0.072	<0.001%
chr4_570197_C_T	chr4:570197	0.004	-0.011	-0.072	<0.001%
chr4_570224_T_G	chr4:570224	0.010	0.005	0.072	<0.001%
chr4_577490_T_C	chr4:577490	0.000	0.013	0.072	<0.001%
chr4_577498_C_T	chr4:577498	0.005	0.006	-0.072	<0.001%
chr4_577528_G_A	chr4:577528	-0.001	0.006	-0.072	0.0013%
chr4_577544_C_A	chr4:577544	0.022	0.013	0.072	<0.001%
chr4_577546_T_G	chr4:577546	0.042	-0.008	0.072	<0.001%
chr4_577595_G_A	chr4:577595	0.016	-0.008	-0.072	<0.001%
chr4_581582_G_C	chr4:581582	-0.002	-0.019	-0.072	0.0013%
chr4_581862_G_A	chr4:581862	-0.010	-0.032	-0.072	0.053%
chr4_582159_G_A	chr4:582159	-0.004	0.032	-0.070	0.0013%
chr4_560956_G_A	chr4:560956	0.043	-0.013	0.007	<0.001%
chr4_560999_A_T	chr4:560999	-0.002	-0.003	-0.069	<0.001%
chr4_581772_T_C	chr4:581772	0.002	0.002	0.069	0.020%
chr4_581838_C_A	chr4:581838	-0.036	-0.019	-0.069	<0.001%
chr4_532837_A_G	chr4:532837	-0.018	-0.029	-0.065	0.0033%
chr4_532932_A_G	chr4:532932	-0.001	-0.022	-0.065	0.0073%
chr4_532966_G_A	chr4:532966	0.011	0.021	0.065	<0.001%
chr4_560909_G_A	chr4:560909	-0.014	0.002	-0.065	<0.001%
chr4_570010_G_C	chr4:570010	-0.014	-0.030	-0.065	0.0020%
chr4_570072_G_C	chr4:570072	0.000	-0.011	-0.065	0.0020%
chr4_570132_G_A	chr4:570132	0.004	-0.006	-0.065	<0.001%
chr4_570238_C_T	chr4:570238	0.002	0.010	-0.065	0.0053%
chr4_577518_C_T	chr4:577518	-0.007	0.002	-0.065	<0.001%
chr4_577798_G_A	chr4:577798	0.025	0.000	0.065	<0.001%
chr4_577830_G_A	chr4:577830	0.000	0.008	-0.065	0.0013%
chr4_577860_G_T	chr4:577860	0.010	0.000	-0.065	<0.001%
chr4_577869_G_A	chr4:577869	-0.004	-0.002	-0.065	<0.001%
chr4_581971_T_C	chr4:581971	0.028	0.010	0.065	0.028%
chr4_560814_A_C	chr4:560814	0.039	0.016	0.036	<0.001%
chr4_570042_C_T	chr4:570042	0.003	-0.006	-0.062	0.0013%
chr4_581661_G_A	chr4:581661	-0.013	-0.003	-0.062	0.0020%
chr4_581771_G_T	chr4:581771	-0.010	-0.016	-0.062	0.0013%
chr4_581786_T_C	chr4:581786	0.009	-0.011	0.062	0.0020%
chr4_581866_C_A	chr4:581866	0.000	-0.006	-0.062	<0.001%
chr4_532887_G_A	chr4:532887	0.008	0.024	0.059	0.0013%
chr4_533056_C_T	chr4:533056	0.014	0.024	-0.059	0.015%
chr4_533065_G_T	chr4:533065	0.006	0.010	-0.059	<0.001%
chr4_560866_G_A	chr4:560866	-0.007	0.024	0.059	<0.001%
chr4_570334_G_T	chr4:570334	0.006	0.006	-0.059	<0.001%
chr4_570356_G_T	chr4:570356	0.004	-0.003	-0.059	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.