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PDGFA

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PDGFA

chr7:397,259..619,844, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr7_415345_C_A	chr7:415345	0.123	0.075	0.687	—
chr7_415328_C_T	chr7:415328	0.086	0.066	0.580	0.850%
chr7_409470_G_C	chr7:409470	-0.101	-0.113	-0.582	<0.001%
chr7_415271_G_T	chr7:415271	0.079	0.047	0.522	—
chr7_415313_T_A	chr7:415313	0.090	0.047	0.473	—
chr7_415255_C_G	chr7:415255	0.120	0.088	0.470	0.0020%
chr7_415334_G_T	chr7:415334	0.074	0.036	0.455	—
chr7_415358_A_C	chr7:415358	0.106	0.060	0.449	—
chr7_415286_G_T	chr7:415286	0.078	0.033	0.440	—
chr7_415369_C_G	chr7:415369	0.104	0.087	0.434	—
chr7_415378_G_A	chr7:415378	0.078	0.023	0.421	—
chr7_415321_G_A	chr7:415321	0.087	0.038	0.409	—
chr7_409487_C_A	chr7:409487	0.038	0.078	0.431	6.37%
chr7_415241_C_A	chr7:415241	0.082	0.047	0.403	<0.001%
chr7_415264_G_A	chr7:415264	0.082	0.016	0.391	—
chr7_415312_C_G	chr7:415312	0.106	0.099	0.391	—
chr7_415362_C_A	chr7:415362	0.066	0.048	0.391	—
chr7_415304_C_A	chr7:415304	0.094	0.048	0.388	—
chr7_415280_T_G	chr7:415280	0.097	0.092	0.379	—
chr7_415225_C_A	chr7:415225	0.068	0.043	0.360	—
chr7_415241_C_G	chr7:415241	0.076	0.035	0.360	—
chr7_409488_C_T	chr7:409488	0.027	0.077	0.376	0.0020%
chr7_409493_C_T	chr7:409493	0.027	0.073	0.373	<0.001%
chr7_409478_C_A	chr7:409478	0.041	0.108	0.366	<0.001%
chr7_409477_C_T	chr7:409477	0.038	0.095	0.363	<0.001%
chr7_415261_C_T	chr7:415261	0.056	0.023	0.336	—
chr7_409469_C_T	chr7:409469	0.024	0.084	0.343	0.012%
chr7_409472_C_A	chr7:409472	0.030	0.062	0.340	<0.001%
chr7_409491_C_A	chr7:409491	0.032	0.069	0.333	<0.001%
chr7_409481_C_G	chr7:409481	0.037	0.074	0.327	<0.001%
chr7_409976_C_T	chr7:409976	0.023	-0.038	0.324	0.015%
chr7_415241_C_T	chr7:415241	0.065	0.036	0.299	0.0033%
chr7_415231_C_A	chr7:415231	0.041	0.045	0.296	—
chr7_415353_T_A	chr7:415353	0.060	0.036	0.293	—
chr7_409485_C_T	chr7:409485	0.030	0.062	0.310	0.0013%
chr7_415255_C_T	chr7:415255	0.068	0.042	0.281	—
chr7_415266_T_A	chr7:415266	0.051	0.016	0.281	—
chr7_409473_C_T	chr7:409473	0.024	0.059	0.297	0.012%
chr7_415314_C_A	chr7:415314	0.058	0.029	0.278	—
chr7_415317_C_A	chr7:415317	0.052	0.031	0.278	—
chr7_415317_C_G	chr7:415317	0.048	0.025	0.278	—
chr7_415292_A_G	chr7:415292	-0.064	-0.036	-0.275	—
chr7_415364_C_A	chr7:415364	0.058	0.021	0.275	—
chr7_415316_C_G	chr7:415316	0.044	0.022	0.269	—
chr7_415223_C_A	chr7:415223	0.050	0.029	0.266	—
chr7_415283_A_G	chr7:415283	-0.049	-0.033	-0.263	<0.001%
chr7_415225_C_G	chr7:415225	0.051	0.030	0.256	—
chr7_415242_G_T	chr7:415242	0.058	0.029	0.256	—
chr7_415281_G_C	chr7:415281	0.051	0.027	0.253	—
chr7_415295_C_A	chr7:415295	0.053	0.030	0.253	—
chr7_415329_G_C	chr7:415329	-0.043	-0.032	-0.250	—
chr7_415329_G_T	chr7:415329	-0.043	-0.025	-0.250	—
chr7_415350_G_A	chr7:415350	0.056	0.047	0.250	—
chr7_415299_G_T	chr7:415299	0.051	0.026	0.241	—
chr7_415221_C_A	chr7:415221	0.048	0.029	0.235	—
chr7_415253_G_T	chr7:415253	0.034	0.013	0.235	—
chr7_415314_C_G	chr7:415314	0.047	0.026	0.235	—
chr7_415265_G_A	chr7:415265	0.040	0.011	0.232	—
chr7_415239_T_A	chr7:415239	0.046	0.032	0.229	—
chr7_415281_G_A	chr7:415281	0.047	0.026	0.229	—
chr7_415257_C_A	chr7:415257	0.051	0.025	0.226	—
chr7_415308_C_G	chr7:415308	0.041	0.001	0.226	—
chr7_415263_G_A	chr7:415263	0.043	0.027	0.223	—
chr7_415304_C_T	chr7:415304	0.043	0.019	0.223	—
chr7_415369_C_T	chr7:415369	0.052	0.038	0.223	—
chr7_415246_T_G	chr7:415246	0.030	0.011	0.220	—
chr7_415360_T_C	chr7:415360	0.051	0.028	0.220	—
chr7_415226_G_T	chr7:415226	0.035	0.027	0.217	—
chr7_415268_A_T	chr7:415268	0.034	0.003	0.217	—
chr7_415225_C_T	chr7:415225	0.040	0.029	0.214	0.034%
chr7_415267_C_A	chr7:415267	0.036	0.007	0.214	—
chr7_415318_C_G	chr7:415318	-0.043	-0.027	-0.214	—
chr7_415375_C_A	chr7:415375	0.041	0.019	0.214	—
chr7_415257_C_T	chr7:415257	0.041	0.021	0.208	—
chr7_415309_A_T	chr7:415309	0.040	0.018	0.208	—
chr7_415330_G_A	chr7:415330	0.044	0.031	0.208	—
chr7_415368_G_A	chr7:415368	0.038	0.021	0.208	—
chr7_415217_C_G	chr7:415217	0.044	0.027	0.202	—
chr7_415323_T_C	chr7:415323	0.029	-0.001	0.202	—
chr7_415383_T_C	chr7:415383	-0.042	-0.019	-0.202	—
chr7_415240_G_A	chr7:415240	0.032	0.023	0.198	—
chr7_415226_G_C	chr7:415226	0.044	0.027	0.195	0.0027%
chr7_415264_G_T	chr7:415264	0.034	0.008	0.195	—
chr7_415305_T_C	chr7:415305	-0.039	-0.016	-0.195	—
chr7_415316_C_A	chr7:415316	0.032	0.018	0.195	—
chr7_415360_T_G	chr7:415360	0.036	0.017	0.195	—
chr7_415361_C_A	chr7:415361	0.036	0.023	0.195	—
chr7_415168_C_T	chr7:415168	0.047	0.034	0.206	0.0021%
chr7_415219_A_C	chr7:415219	0.033	0.012	0.192	—
chr7_415223_C_T	chr7:415223	0.037	0.024	0.192	—
chr7_415268_A_C	chr7:415268	0.029	-0.001	0.192	—
chr7_415277_G_T	chr7:415277	0.035	0.012	0.186	—
chr7_415299_G_A	chr7:415299	0.044	0.021	0.186	0.022%
chr7_415315_A_T	chr7:415315	0.038	0.012	0.186	<0.001%
chr7_415320_G_A	chr7:415320	0.033	0.027	0.186	—
chr7_415221_C_G	chr7:415221	0.037	0.029	0.183	—
chr7_415256_T_A	chr7:415256	0.038	0.024	0.183	—
chr7_415298_C_A	chr7:415298	0.040	0.023	0.183	0.0047%
chr7_415381_C_A	chr7:415381	0.038	0.017	0.183	—
chr7_415272_G_A	chr7:415272	0.034	0.014	0.180	—
chr7_415341_G_A	chr7:415341	0.032	0.019	0.180	—
chr7_415219_A_T	chr7:415219	0.026	0.019	0.177	—
chr7_415227_G_T	chr7:415227	0.022	0.032	0.177	—
chr7_415257_C_G	chr7:415257	0.039	0.028	0.177	—
chr7_415265_G_C	chr7:415265	0.024	-0.003	0.177	—
chr7_415337_C_G	chr7:415337	0.043	0.032	0.177	0.0020%
chr7_415357_G_A	chr7:415357	0.027	0.018	0.177	—
chr7_415367_G_T	chr7:415367	0.033	0.018	0.177	<0.001%
chr7_415240_G_C	chr7:415240	0.038	0.019	0.174	—
chr7_409466_C_G	chr7:409466	0.022	0.033	0.183	<0.001%
chr7_415242_G_A	chr7:415242	0.038	0.018	0.171	0.0060%
chr7_415266_T_C	chr7:415266	0.026	0.002	0.171	—
chr7_415309_A_G	chr7:415309	0.033	0.016	0.171	—
chr7_415237_C_T	chr7:415237	0.042	0.025	0.168	—
chr7_415228_G_T	chr7:415228	-0.036	-0.010	-0.165	—
chr7_415274_C_T	chr7:415274	0.039	0.027	0.165	0.0013%
chr7_415298_C_T	chr7:415298	0.032	0.015	0.165	<0.001%
chr7_415312_C_A	chr7:415312	0.041	0.025	0.165	—
chr7_415341_G_C	chr7:415341	0.021	0.013	0.165	—
chr7_415375_C_T	chr7:415375	0.030	0.019	0.165	—
chr7_415380_T_C	chr7:415380	0.020	-0.004	0.165	—
chr7_415299_G_C	chr7:415299	0.027	0.010	0.162	—
chr7_415315_A_G	chr7:415315	0.027	0.006	0.162	—
chr7_409589_G_A	chr7:409589	0.035	0.038	0.170	0.0033%
chr7_415248_C_G	chr7:415248	-0.032	-0.019	-0.159	—
chr7_415322_G_C	chr7:415322	0.027	0.008	0.159	—
chr7_415325_A_G	chr7:415325	-0.029	-0.036	-0.159	—
chr7_415327_G_A	chr7:415327	-0.022	-0.014	-0.159	0.0027%
chr7_415353_T_G	chr7:415353	0.030	0.008	0.159	—
chr7_415354_G_A	chr7:415354	0.026	0.018	0.159	<0.001%
chr7_409501_C_T	chr7:409501	0.021	0.029	0.167	<0.001%
chr7_415237_C_G	chr7:415237	0.029	0.018	0.156	—
chr7_415273_G_A	chr7:415273	0.031	0.018	0.156	—
chr7_415243_G_T	chr7:415243	0.031	0.021	0.153	<0.001%
chr7_415251_C_G	chr7:415251	0.025	0.008	0.153	—
chr7_415273_G_T	chr7:415273	0.033	0.018	0.153	—
chr7_415275_C_T	chr7:415275	0.030	0.018	0.153	—
chr7_415305_T_A	chr7:415305	-0.031	-0.014	-0.153	—
chr7_415363_T_G	chr7:415363	0.021	0.008	0.153	—
chr7_415371_C_A	chr7:415371	0.032	0.014	0.153	—
chr7_409502_C_A	chr7:409502	0.020	0.033	0.160	0.020%
chr7_409590_C_T	chr7:409590	0.058	0.038	0.160	0.0020%
chr7_415175_T_C	chr7:415175	-0.032	-0.026	-0.160	0.024%
chr7_415265_G_T	chr7:415265	0.024	0.000	0.150	—
chr7_415281_G_T	chr7:415281	0.026	0.008	0.150	—
chr7_415305_T_G	chr7:415305	-0.029	-0.012	-0.150	—
chr7_415314_C_T	chr7:415314	0.033	0.016	0.150	0.0013%
chr7_415365_T_G	chr7:415365	0.018	-0.002	0.150	—
chr7_415334_G_A	chr7:415334	0.021	0.016	0.147	—
chr7_409591_G_A	chr7:409591	-0.039	-0.024	-0.154	0.0026%
chr7_415267_C_T	chr7:415267	0.026	0.005	0.144	—
chr7_415347_G_A	chr7:415347	0.024	0.018	0.144	0.0026%
chr7_415357_G_T	chr7:415357	0.024	0.015	0.144	—
chr7_415393_T_C	chr7:415393	0.025	0.007	0.144	—
chr7_409558_C_T	chr7:409558	0.027	0.012	0.150	0.0013%
chr7_415278_T_C	chr7:415278	-0.026	-0.019	-0.140	—
chr7_415284_G_A	chr7:415284	0.030	0.009	0.140	—
chr7_415312_C_T	chr7:415312	0.037	0.036	0.140	—
chr7_415320_G_T	chr7:415320	0.022	0.015	0.140	—
chr7_415361_C_G	chr7:415361	0.019	0.012	0.140	—
chr7_415378_G_T	chr7:415378	0.029	0.009	0.140	—
chr7_409589_G_C	chr7:409589	0.045	0.031	0.147	0.390%
chr7_415224_A_G	chr7:415224	-0.029	-0.030	-0.137	—
chr7_415226_G_A	chr7:415226	0.020	0.017	0.137	0.0040%
chr7_415233_G_T	chr7:415233	0.026	0.018	0.137	—
chr7_415240_G_T	chr7:415240	0.028	0.013	0.137	—
chr7_415315_A_C	chr7:415315	0.032	0.004	0.137	—
chr7_415321_G_C	chr7:415321	0.019	0.003	0.137	—
chr7_415356_A_C	chr7:415356	0.017	0.006	0.137	—
chr7_415215_G_T	chr7:415215	0.027	0.027	0.134	—
chr7_415231_C_G	chr7:415231	-0.029	-0.016	-0.134	—
chr7_415251_C_A	chr7:415251	0.024	0.013	0.134	—
chr7_415333_A_T	chr7:415333	0.012	0.008	0.134	—
chr7_409504_C_T	chr7:409504	0.013	0.026	0.141	0.0020%
chr7_415218_C_G	chr7:415218	-0.019	-0.015	-0.131	—
chr7_415233_G_C	chr7:415233	0.025	0.011	0.131	—
chr7_415255_C_A	chr7:415255	0.034	0.025	0.131	—
chr7_415307_C_A	chr7:415307	0.027	0.014	0.131	—
chr7_415325_A_T	chr7:415325	-0.021	-0.023	-0.131	—
chr7_415330_G_T	chr7:415330	-0.013	-0.001	-0.131	—
chr7_415332_C_G	chr7:415332	-0.023	-0.014	-0.131	—
chr7_409504_C_G	chr7:409504	0.022	0.022	0.137	<0.001%
chr7_415210_G_C	chr7:415210	0.026	0.017	0.128	0.011%
chr7_415262_T_G	chr7:415262	-0.017	-0.005	-0.128	—
chr7_415289_A_C	chr7:415289	-0.029	-0.019	-0.128	—
chr7_415329_G_A	chr7:415329	-0.017	-0.016	-0.128	0.0046%
chr7_415371_C_G	chr7:415371	0.031	0.009	0.128	—
chr7_415371_C_T	chr7:415371	0.026	0.018	0.128	0.0066%
chr7_415391_G_T	chr7:415391	0.028	0.001	0.128	—
chr7_409558_C_G	chr7:409558	0.024	0.002	0.134	<0.001%
chr7_415227_G_C	chr7:415227	-0.034	-0.016	-0.125	—
chr7_415233_G_A	chr7:415233	0.019	0.016	0.125	0.0053%
chr7_415249_T_C	chr7:415249	0.024	0.005	0.125	—
chr7_415280_T_C	chr7:415280	-0.028	-0.015	-0.125	—
chr7_415291_C_T	chr7:415291	0.028	0.016	0.125	—
chr7_415326_C_A	chr7:415326	-0.014	-0.015	-0.125	—
chr7_415327_G_T	chr7:415327	-0.014	-0.014	-0.125	—
chr7_415347_G_C	chr7:415347	0.028	0.009	0.125	—
chr7_415374_C_G	chr7:415374	0.025	0.007	0.125	—
chr7_415229_G_T	chr7:415229	0.022	0.024	0.122	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.