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PDGFA
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PDGFA
chr7:397,259..619,844, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr7_415345_C_A | chr7:415345 | 4,592 | 920 | 14,400 | — |
| chr7_415255_C_G | chr7:415255 | 4,496 | 1,080 | 9,856 | 2.0e-5 |
| chr7_415312_C_G | chr7:415312 | 3,984 | 1,216 | 8,192 | — |
| chr7_415358_A_C | chr7:415358 | 3,952 | 736 | 9,408 | — |
| chr7_415369_C_G | chr7:415369 | 3,888 | 1,072 | 9,088 | — |
| chr7_415280_T_G | chr7:415280 | 3,616 | 1,128 | 7,936 | — |
| chr7_415304_C_A | chr7:415304 | 3,504 | 592 | 8,128 | — |
| chr7_415313_T_A | chr7:415313 | 3,360 | 576 | 9,920 | — |
| chr7_415321_G_A | chr7:415321 | 3,248 | 464 | 8,576 | — |
| chr7_415328_C_T | chr7:415328 | 3,232 | 816 | 12,160 | 8.5e-3 |
| chr7_409470_G_C | chr7:409470 | -3,120 | -1,128 | -11,392 | 6.6e-6 |
| chr7_415241_C_A | chr7:415241 | 3,088 | 576 | 8,448 | 6.7e-6 |
| chr7_415264_G_A | chr7:415264 | 3,056 | 192 | 8,192 | — |
| chr7_415271_G_T | chr7:415271 | 2,960 | 576 | 10,944 | — |
| chr7_415286_G_T | chr7:415286 | 2,912 | 408 | 9,216 | — |
| chr7_415378_G_A | chr7:415378 | 2,912 | 288 | 8,832 | — |
| chr7_415241_C_G | chr7:415241 | 2,832 | 432 | 7,552 | — |
| chr7_415334_G_T | chr7:415334 | 2,784 | 440 | 9,536 | — |
| chr7_415225_C_A | chr7:415225 | 2,544 | 528 | 7,552 | — |
| chr7_415255_C_T | chr7:415255 | 2,544 | 520 | 5,888 | — |
| chr7_415362_C_A | chr7:415362 | 2,464 | 592 | 8,192 | — |
| chr7_415241_C_T | chr7:415241 | 2,448 | 448 | 6,272 | 3.3e-5 |
| chr7_415292_A_G | chr7:415292 | -2,384 | -440 | -5,760 | — |
| chr7_415353_T_A | chr7:415353 | 2,240 | 448 | 6,144 | — |
| chr7_415314_C_A | chr7:415314 | 2,176 | 352 | 5,824 | — |
| chr7_415364_C_A | chr7:415364 | 2,176 | 256 | 5,760 | — |
| chr7_415242_G_T | chr7:415242 | 2,176 | 352 | 5,376 | — |
| chr7_415261_C_T | chr7:415261 | 2,080 | 280 | 7,040 | — |
| chr7_415350_G_A | chr7:415350 | 2,080 | 576 | 5,248 | — |
| chr7_415295_C_A | chr7:415295 | 1,984 | 368 | 5,312 | — |
| chr7_415369_C_T | chr7:415369 | 1,952 | 472 | 4,672 | — |
| chr7_415317_C_A | chr7:415317 | 1,936 | 376 | 5,824 | — |
| chr7_415225_C_G | chr7:415225 | 1,920 | 368 | 5,376 | — |
| chr7_415281_G_C | chr7:415281 | 1,920 | 336 | 5,312 | — |
| chr7_415299_G_T | chr7:415299 | 1,920 | 320 | 5,056 | — |
| chr7_415266_T_A | chr7:415266 | 1,904 | 200 | 5,888 | — |
| chr7_415257_C_A | chr7:415257 | 1,904 | 312 | 4,736 | — |
| chr7_415360_T_C | chr7:415360 | 1,904 | 344 | 4,608 | — |
| chr7_415223_C_A | chr7:415223 | 1,856 | 360 | 5,568 | — |
| chr7_415283_A_G | chr7:415283 | -1,824 | -408 | -5,504 | 6.9e-6 |
| chr7_415317_C_G | chr7:415317 | 1,808 | 312 | 5,824 | — |
| chr7_415221_C_A | chr7:415221 | 1,808 | 360 | 4,928 | — |
| chr7_409590_C_T | chr7:409590 | 1,792 | 376 | 3,136 | 2.0e-5 |
| chr7_415314_C_G | chr7:415314 | 1,760 | 320 | 4,928 | — |
| chr7_415281_G_A | chr7:415281 | 1,760 | 320 | 4,800 | — |
| chr7_415239_T_A | chr7:415239 | 1,712 | 392 | 4,800 | — |
| chr7_415316_C_G | chr7:415316 | 1,664 | 272 | 5,632 | — |
| chr7_415217_C_G | chr7:415217 | 1,664 | 328 | 4,224 | — |
| chr7_415226_G_C | chr7:415226 | 1,664 | 328 | 4,096 | 2.7e-5 |
| chr7_415330_G_A | chr7:415330 | 1,648 | 376 | 4,352 | — |
| chr7_415299_G_A | chr7:415299 | 1,632 | 256 | 3,904 | 2.2e-4 |
| chr7_415329_G_C | chr7:415329 | -1,616 | -400 | -5,248 | — |
| chr7_415304_C_T | chr7:415304 | 1,616 | 240 | 4,672 | — |
| chr7_415318_C_G | chr7:415318 | -1,616 | -336 | -4,480 | — |
| chr7_415329_G_T | chr7:415329 | -1,600 | -312 | -5,248 | — |
| chr7_415263_G_A | chr7:415263 | 1,600 | 328 | 4,672 | — |
| chr7_415337_C_G | chr7:415337 | 1,600 | 400 | 3,712 | 2.0e-5 |
| chr7_415383_T_C | chr7:415383 | -1,584 | -240 | -4,224 | — |
| chr7_415237_C_T | chr7:415237 | 1,584 | 304 | 3,520 | — |
| chr7_415257_C_T | chr7:415257 | 1,552 | 264 | 4,352 | — |
| chr7_415231_C_A | chr7:415231 | 1,536 | 560 | 6,208 | — |
| chr7_415308_C_G | chr7:415308 | 1,536 | 16 | 4,736 | — |
| chr7_415375_C_A | chr7:415375 | 1,520 | 240 | 4,480 | — |
| chr7_415312_C_A | chr7:415312 | 1,520 | 304 | 3,456 | — |
| chr7_415265_G_A | chr7:415265 | 1,504 | 136 | 4,864 | — |
| chr7_415225_C_T | chr7:415225 | 1,504 | 352 | 4,480 | 3.4e-4 |
| chr7_415309_A_T | chr7:415309 | 1,504 | 224 | 4,352 | — |
| chr7_415298_C_A | chr7:415298 | 1,488 | 280 | 3,840 | 4.7e-5 |
| chr7_415305_T_C | chr7:415305 | -1,456 | -200 | -4,096 | — |
| chr7_415168_C_T | chr7:415168 | 1,456 | 344 | 4,032 | 2.1e-5 |
| chr7_415257_C_G | chr7:415257 | 1,456 | 344 | 3,712 | — |
| chr7_415274_C_T | chr7:415274 | 1,456 | 336 | 3,456 | 1.3e-5 |
| chr7_415242_G_A | chr7:415242 | 1,440 | 224 | 3,584 | 6.0e-5 |
| chr7_415256_T_A | chr7:415256 | 1,424 | 296 | 3,840 | — |
| chr7_415368_G_A | chr7:415368 | 1,408 | 264 | 4,352 | — |
| chr7_415315_A_T | chr7:415315 | 1,408 | 144 | 3,904 | 6.6e-6 |
| chr7_415381_C_A | chr7:415381 | 1,408 | 208 | 3,840 | — |
| chr7_415240_G_C | chr7:415240 | 1,408 | 240 | 3,648 | — |
| chr7_409589_G_C | chr7:409589 | 1,408 | 312 | 2,880 | 3.9e-3 |
| chr7_415312_C_T | chr7:415312 | 1,392 | 448 | 2,944 | — |
| chr7_415223_C_T | chr7:415223 | 1,376 | 296 | 4,032 | — |
| chr7_415221_C_G | chr7:415221 | 1,376 | 360 | 3,840 | — |
| chr7_415267_C_A | chr7:415267 | 1,360 | 88 | 4,480 | — |
| chr7_415361_C_A | chr7:415361 | 1,360 | 288 | 4,096 | — |
| chr7_415360_T_G | chr7:415360 | 1,344 | 208 | 4,096 | — |
| chr7_415228_G_T | chr7:415228 | -1,344 | -128 | -3,456 | — |
| chr7_415226_G_T | chr7:415226 | 1,312 | 328 | 4,544 | — |
| chr7_415277_G_T | chr7:415277 | 1,312 | 152 | 3,904 | — |
| chr7_409478_C_A | chr7:409478 | 1,280 | 1,080 | 7,168 | 6.6e-6 |
| chr7_415253_G_T | chr7:415253 | 1,280 | 160 | 4,928 | — |
| chr7_415268_A_T | chr7:415268 | 1,280 | 32 | 4,544 | — |
| chr7_415264_G_T | chr7:415264 | 1,280 | 96 | 4,096 | — |
| chr7_415255_C_A | chr7:415255 | 1,280 | 312 | 2,752 | — |
| chr7_415272_G_A | chr7:415272 | 1,264 | 176 | 3,776 | — |
| chr7_415227_G_C | chr7:415227 | -1,264 | -192 | -2,624 | — |
| chr7_415320_G_A | chr7:415320 | 1,248 | 328 | 3,904 | — |
| chr7_415309_A_G | chr7:415309 | 1,248 | 192 | 3,584 | — |
| chr7_415314_C_T | chr7:415314 | 1,248 | 192 | 3,136 | 1.3e-5 |
| chr7_415219_A_C | chr7:415219 | 1,232 | 152 | 4,032 | — |
| chr7_415367_G_T | chr7:415367 | 1,232 | 224 | 3,712 | 6.6e-6 |
| chr7_415273_G_T | chr7:415273 | 1,232 | 224 | 3,200 | — |
| chr7_415248_C_G | chr7:415248 | -1,216 | -232 | -3,328 | — |
| chr7_415371_C_A | chr7:415371 | 1,216 | 176 | 3,200 | — |
| chr7_409591_G_A | chr7:409591 | -1,216 | -240 | -3,008 | 2.6e-5 |
| chr7_415240_G_A | chr7:415240 | 1,200 | 288 | 4,160 | — |
| chr7_415298_C_T | chr7:415298 | 1,200 | 184 | 3,456 | 6.7e-6 |
| chr7_409487_C_A | chr7:409487 | 1,184 | 784 | 8,448 | 6.4e-2 |
| chr7_409477_C_T | chr7:409477 | 1,184 | 952 | 7,104 | 6.6e-6 |
| chr7_415316_C_A | chr7:415316 | 1,184 | 224 | 4,096 | — |
| chr7_415341_G_A | chr7:415341 | 1,184 | 240 | 3,776 | — |
| chr7_415315_A_C | chr7:415315 | 1,184 | 48 | 2,880 | — |
| chr7_415273_G_A | chr7:415273 | 1,168 | 216 | 3,264 | — |
| chr7_415305_T_A | chr7:415305 | -1,168 | -176 | -3,200 | — |
| chr7_409481_C_G | chr7:409481 | 1,152 | 744 | 6,400 | 6.6e-6 |
| chr7_415243_G_T | chr7:415243 | 1,152 | 256 | 3,200 | 6.6e-6 |
| chr7_415371_C_G | chr7:415371 | 1,152 | 112 | 2,688 | — |
| chr7_415246_T_G | chr7:415246 | 1,136 | 136 | 4,608 | — |
| chr7_415353_T_G | chr7:415353 | 1,136 | 96 | 3,328 | — |
| chr7_415375_C_T | chr7:415375 | 1,120 | 232 | 3,456 | — |
| chr7_415275_C_T | chr7:415275 | 1,120 | 216 | 3,200 | — |
| chr7_415284_G_A | chr7:415284 | 1,120 | 112 | 2,944 | — |
| chr7_415325_A_G | chr7:415325 | -1,104 | -448 | -3,328 | — |
| chr7_415305_T_G | chr7:415305 | -1,104 | -144 | -3,136 | — |
| chr7_415231_C_G | chr7:415231 | -1,104 | -200 | -2,816 | — |
| chr7_415323_T_C | chr7:415323 | 1,088 | -8 | 4,224 | — |
| chr7_415268_A_C | chr7:415268 | 1,088 | -16 | 4,032 | — |
| chr7_409589_G_A | chr7:409589 | 1,088 | 376 | 3,328 | 3.3e-5 |
| chr7_415378_G_T | chr7:415378 | 1,088 | 112 | 2,944 | — |
| chr7_415224_A_G | chr7:415224 | -1,088 | -368 | -2,880 | — |
| chr7_415237_C_G | chr7:415237 | 1,072 | 216 | 3,264 | — |
| chr7_415289_A_C | chr7:415289 | -1,072 | -232 | -2,688 | — |
| chr7_415240_G_T | chr7:415240 | 1,056 | 160 | 2,880 | — |
| chr7_415280_T_C | chr7:415280 | -1,056 | -184 | -2,624 | — |
| chr7_415347_G_C | chr7:415347 | 1,056 | 112 | 2,624 | — |
| chr7_415391_G_T | chr7:415391 | 1,040 | 16 | 2,688 | — |
| chr7_415291_C_T | chr7:415291 | 1,040 | 200 | 2,624 | — |
| chr7_415299_G_C | chr7:415299 | 1,024 | 128 | 3,392 | — |
| chr7_415315_A_G | chr7:415315 | 1,024 | 80 | 3,392 | — |
| chr7_415322_G_C | chr7:415322 | 1,024 | 96 | 3,328 | — |
| chr7_415307_C_A | chr7:415307 | 1,024 | 176 | 2,752 | — |
| chr7_415357_G_A | chr7:415357 | 1,008 | 224 | 3,712 | — |
| chr7_415175_T_C | chr7:415175 | -1,008 | -264 | -3,136 | 2.4e-4 |
| chr7_415215_G_T | chr7:415215 | 1,008 | 328 | 2,816 | — |
| chr7_409491_C_A | chr7:409491 | 992 | 696 | 6,528 | 6.6e-6 |
| chr7_415278_T_C | chr7:415278 | -992 | -240 | -2,944 | — |
| chr7_415210_G_C | chr7:415210 | 992 | 208 | 2,688 | 1.1e-4 |
| chr7_415219_A_T | chr7:415219 | 976 | 232 | 3,712 | — |
| chr7_415354_G_A | chr7:415354 | 976 | 216 | 3,328 | 6.6e-6 |
| chr7_415266_T_C | chr7:415266 | 960 | 24 | 3,584 | — |
| chr7_415281_G_T | chr7:415281 | 960 | 104 | 3,136 | — |
| chr7_415267_C_T | chr7:415267 | 960 | 64 | 3,008 | — |
| chr7_415233_G_T | chr7:415233 | 960 | 224 | 2,880 | — |
| chr7_415371_C_T | chr7:415371 | 960 | 224 | 2,688 | 6.6e-5 |
| chr7_415393_T_C | chr7:415393 | 944 | 88 | 3,008 | — |
| chr7_415233_G_C | chr7:415233 | 944 | 136 | 2,752 | — |
| chr7_409472_C_A | chr7:409472 | 928 | 616 | 6,656 | 6.6e-6 |
| chr7_409485_C_T | chr7:409485 | 928 | 616 | 6,080 | 1.3e-5 |
| chr7_415251_C_G | chr7:415251 | 928 | 96 | 3,200 | — |
| chr7_415374_C_G | chr7:415374 | 928 | 88 | 2,624 | — |
| chr7_415265_G_C | chr7:415265 | 912 | -32 | 3,712 | — |
| chr7_415347_G_A | chr7:415347 | 912 | 224 | 3,008 | 2.6e-5 |
| chr7_415251_C_A | chr7:415251 | 896 | 160 | 2,816 | — |
| chr7_415249_T_C | chr7:415249 | 896 | 64 | 2,624 | — |
| chr7_415265_G_T | chr7:415265 | 880 | 0 | 3,136 | — |
| chr7_415357_G_T | chr7:415357 | 880 | 184 | 3,008 | — |
| chr7_415332_C_G | chr7:415332 | -848 | -168 | -2,752 | — |
| chr7_409488_C_T | chr7:409488 | 832 | 776 | 7,360 | 2.0e-5 |
| chr7_409493_C_T | chr7:409493 | 832 | 728 | 7,296 | 6.6e-6 |
| chr7_409558_C_T | chr7:409558 | 832 | 120 | 2,944 | 1.3e-5 |
| chr7_415320_G_T | chr7:415320 | 832 | 184 | 2,944 | — |
| chr7_415229_G_T | chr7:415229 | 832 | 296 | 2,560 | — |
| chr7_415227_G_T | chr7:415227 | 816 | 392 | 3,712 | — |
| chr7_415327_G_A | chr7:415327 | -816 | -176 | -3,328 | 2.7e-5 |
| chr7_415334_G_A | chr7:415334 | 784 | 200 | 3,072 | — |
| chr7_415325_A_T | chr7:415325 | -784 | -280 | -2,752 | — |
| chr7_415341_G_C | chr7:415341 | 768 | 160 | 3,456 | — |
| chr7_415363_T_G | chr7:415363 | 768 | 104 | 3,200 | — |
| chr7_415226_G_A | chr7:415226 | 752 | 208 | 2,880 | 4.0e-5 |
| chr7_409469_C_T | chr7:409469 | 736 | 840 | 6,720 | 1.2e-4 |
| chr7_409473_C_T | chr7:409473 | 736 | 592 | 5,824 | 1.2e-4 |
| chr7_415380_T_C | chr7:415380 | 736 | -48 | 3,456 | — |
| chr7_409558_C_G | chr7:409558 | 736 | 16 | 2,624 | 6.6e-6 |
| chr7_415321_G_C | chr7:415321 | 720 | 40 | 2,880 | — |
| chr7_409976_C_T | chr7:409976 | 704 | -384 | 6,336 | 1.5e-4 |
| chr7_415361_C_G | chr7:415361 | 704 | 152 | 2,944 | — |
| chr7_415218_C_G | chr7:415218 | -704 | -184 | -2,752 | — |
| chr7_415233_G_A | chr7:415233 | 704 | 200 | 2,624 | 5.3e-5 |
| chr7_415365_T_G | chr7:415365 | 688 | -24 | 3,136 | — |
| chr7_409466_C_G | chr7:409466 | 672 | 328 | 3,584 | 6.6e-6 |
| chr7_409504_C_G | chr7:409504 | 672 | 224 | 2,688 | 6.6e-6 |
| chr7_409501_C_T | chr7:409501 | 640 | 288 | 3,264 | 6.6e-6 |
| chr7_415356_A_C | chr7:415356 | 640 | 72 | 2,880 | — |
| chr7_415329_G_A | chr7:415329 | -640 | -192 | -2,688 | 4.6e-5 |
| chr7_415262_T_G | chr7:415262 | -624 | -56 | -2,688 | — |
| chr7_409502_C_A | chr7:409502 | 608 | 328 | 3,136 | 2.0e-4 |
| chr7_415326_C_A | chr7:415326 | -528 | -184 | -2,624 | — |
| chr7_415327_G_T | chr7:415327 | -512 | -168 | -2,624 | — |
| chr7_415330_G_T | chr7:415330 | -480 | -16 | -2,752 | — |
| chr7_415333_A_T | chr7:415333 | 448 | 96 | 2,816 | — |
| chr7_409504_C_T | chr7:409504 | 416 | 256 | 2,752 | 2.0e-5 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.