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PHF23

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PHF23

chr17:7,135,027..7,339,457, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr17_7156527_G_T	chr17:7156527	-1.000	-1.000	-1.000	<0.001%
chr17_7156529_C_T	chr17:7156529	-1.000	-1.000	-1.000	<0.001%
chr17_7156488_C_G	chr17:7156488	1.000	1.000	0.850	<0.001%
chr17_7156544_G_A	chr17:7156544	-1.000	-1.000	-1.000	<0.001%
chr17_7156485_T_G	chr17:7156485	-1.000	-1.000	-1.000	<0.001%
chr17_7156441_C_T	chr17:7156441	-1.000	-1.000	-0.941	<0.001%
chr17_7156445_C_G	chr17:7156445	-1.000	-1.000	-0.967	0.0033%
chr17_7156440_T_A	chr17:7156440	-0.998	-1.000	-0.993	<0.001%
chr17_7156547_C_G	chr17:7156547	-0.984	-1.000	-0.667	<0.001%
chr17_7135573_C_T	chr17:7135573	0.773	0.891	1.000	<0.001%
chr17_7156504_G_A	chr17:7156504	-0.921	-1.000	-0.758	0.0013%
chr17_7156432_G_A	chr17:7156432	0.837	1.000	0.542	<0.001%
chr17_7156488_C_T	chr17:7156488	-0.792	-1.000	-0.641	<0.001%
chr17_7156497_C_T	chr17:7156497	0.730	1.000	0.516	0.0092%
chr17_7135796_A_C	chr17:7135796	0.493	0.326	1.000	0.0020%
chr17_7156444_C_T	chr17:7156444	-0.703	-1.000	-0.703	<0.001%
chr17_7156442_C_T	chr17:7156442	-0.691	-1.000	-0.654	0.0026%
chr17_7135809_C_T	chr17:7135809	-0.396	-0.585	-1.000	0.0013%
chr17_7156481_G_C	chr17:7156481	-0.627	-0.984	-0.556	0.0013%
chr17_7156543_C_T	chr17:7156543	-0.612	-0.569	-0.389	0.0020%
chr17_7156567_G_C	chr17:7156567	0.595	0.722	0.163	0.0013%
chr17_7156479_G_A	chr17:7156479	-0.538	-0.732	-0.438	<0.001%
chr17_7165288_C_G	chr17:7165288	-0.452	-0.254	-0.830	<0.001%
chr17_7165288_C_T	chr17:7165288	-0.460	-0.244	-0.820	0.0039%
chr17_7156549_G_A	chr17:7156549	-0.493	-0.636	-0.373	<0.001%
chr17_7156447_C_T	chr17:7156447	-0.486	-0.601	-0.353	<0.001%
chr17_7165293_T_A	chr17:7165293	-0.457	-0.225	-0.699	<0.001%
chr17_7135846_C_T	chr17:7135846	0.227	0.296	0.673	<0.001%
chr17_7156647_G_A	chr17:7156647	0.420	0.978	0.588	0.0076%
chr17_7156609_C_G	chr17:7156609	-0.419	-0.470	-0.569	<0.001%
chr17_7156663_G_A	chr17:7156663	0.397	0.958	0.516	0.011%
chr17_7156455_C_T	chr17:7156455	0.382	0.454	0.294	0.0013%
chr17_7165295_T_C	chr17:7165295	-0.349	-0.187	-0.510	<0.001%
chr17_7135811_G_A	chr17:7135811	-0.341	-0.252	-0.500	<0.001%
chr17_7139031_C_T	chr17:7139031	0.060	0.142	0.529	<0.001%
chr17_7156456_G_A	chr17:7156456	-0.331	-0.431	-0.307	<0.001%
chr17_7165345_T_C	chr17:7165345	0.269	0.281	0.523	<0.001%
chr17_7156456_G_T	chr17:7156456	-0.311	-0.332	-0.261	<0.001%
chr17_7156465_G_A	chr17:7156465	-0.302	-0.326	-0.301	<0.001%
chr17_7156399_T_C	chr17:7156399	0.295	0.447	0.281	<0.001%
chr17_7156550_G_A	chr17:7156550	-0.279	-0.428	-0.281	<0.001%
chr17_7156623_G_T	chr17:7156623	-0.271	-0.415	-0.186	0.990%
chr17_7135801_T_C	chr17:7135801	0.112	0.177	0.425	<0.001%
chr17_7135499_C_G	chr17:7135499	-0.164	-0.431	-0.422	1.48%
chr17_7135728_A_C	chr17:7135728	-0.130	-0.206	-0.418	<0.001%
chr17_7135859_G_C	chr17:7135859	0.203	0.288	0.418	0.0013%
chr17_7156610_G_T	chr17:7156610	-0.258	-0.463	-0.235	0.013%
chr17_7156595_C_G	chr17:7156595	0.253	0.345	0.232	<0.001%
chr17_7156661_G_A	chr17:7156661	0.249	0.712	0.356	0.279%
chr17_7165296_T_C	chr17:7165296	-0.237	-0.120	-0.353	0.0066%
chr17_7156610_G_A	chr17:7156610	-0.231	-0.361	-0.203	0.0020%
chr17_7156400_A_G	chr17:7156400	0.227	0.383	0.222	0.0013%
chr17_7156478_T_G	chr17:7156478	-0.220	-0.332	-0.196	<0.001%
chr17_7139035_T_C	chr17:7139035	-0.077	-0.003	-0.346	2.60%
chr17_7135884_G_T	chr17:7135884	0.101	0.102	0.340	0.014%
chr17_7135897_G_C	chr17:7135897	-0.135	-0.208	-0.340	<0.001%
chr17_7148063_C_T	chr17:7148063	0.214	0.211	0.196	<0.001%
chr17_7148069_G_A	chr17:7148069	-0.212	-0.150	-0.304	0.0020%
chr17_7156645_G_A	chr17:7156645	0.211	0.617	0.291	0.047%
chr17_7156627_G_C	chr17:7156627	0.210	0.176	0.206	0.0035%
chr17_7156511_G_T	chr17:7156511	-0.204	-0.128	-0.124	<0.001%
chr17_7148152_C_T	chr17:7148152	0.179	0.319	0.322	0.0020%
chr17_7165344_A_G	chr17:7165344	0.166	0.157	0.320	0.031%
chr17_7156642_A_G	chr17:7156642	-0.201	-0.581	-0.219	0.346%
chr17_7135674_C_G	chr17:7135674	0.146	0.192	0.307	<0.001%
chr17_7135547_G_A	chr17:7135547	0.193	0.411	0.235	0.0020%
chr17_7156629_G_A	chr17:7156629	0.168	0.588	0.294	0.0023%
chr17_7156425_A_G	chr17:7156425	0.189	0.208	0.229	<0.001%
chr17_7135843_A_C	chr17:7135843	0.078	0.070	0.294	<0.001%
chr17_7135448_G_A	chr17:7135448	0.076	0.240	0.291	<0.001%
chr17_7135894_G_A	chr17:7135894	-0.065	-0.121	-0.288	0.0020%
chr17_7139158_C_T	chr17:7139158	0.066	-0.081	-0.268	<0.001%
chr17_7135787_G_A	chr17:7135787	0.166	0.181	0.229	<0.001%
chr17_7139035_T_G	chr17:7139035	-0.057	0.011	-0.261	0.0020%
chr17_7156651_A_G	chr17:7156651	0.162	0.121	-0.016	0.029%
chr17_7165065_C_A	chr17:7165065	-0.113	-0.080	-0.255	<0.001%
chr17_7135533_C_G	chr17:7135533	0.125	0.312	0.248	<0.001%
chr17_7135682_C_T	chr17:7135682	0.155	0.240	0.118	<0.001%
chr17_7135537_G_C	chr17:7135537	-0.130	-0.292	-0.245	<0.001%
chr17_7156639_G_T	chr17:7156639	-0.104	-0.479	-0.222	0.021%
chr17_7135522_C_G	chr17:7135522	-0.103	-0.272	-0.242	0.0066%
chr17_7135803_G_C	chr17:7135803	0.064	0.179	0.242	0.0046%
chr17_7139036_G_A	chr17:7139036	-0.044	-0.003	-0.242	0.0013%
chr17_7148041_C_G	chr17:7148041	0.081	0.086	0.242	<0.001%
chr17_7156658_A_G	chr17:7156658	-0.153	-0.377	-0.098	0.0058%
chr17_7165284_C_G	chr17:7165284	-0.153	-0.065	-0.111	0.0033%
chr17_7135461_A_G	chr17:7135461	0.045	0.147	0.235	<0.001%
chr17_7135916_G_A	chr17:7135916	0.085	0.083	0.235	0.0013%
chr17_7139002_T_C	chr17:7139002	-0.098	-0.096	-0.235	<0.001%
chr17_7165191_C_T	chr17:7165191	0.146	0.070	0.222	0.0020%
chr17_7135831_C_T	chr17:7135831	-0.016	0.110	0.229	<0.001%
chr17_7138960_C_T	chr17:7138960	-0.056	-0.051	-0.229	0.0020%
chr17_7138991_A_G	chr17:7138991	-0.080	-0.046	-0.229	<0.001%
chr17_7165318_A_T	chr17:7165318	-0.144	-0.073	-0.222	<0.001%
chr17_7135875_G_C	chr17:7135875	0.065	0.099	0.222	<0.001%
chr17_7135887_G_A	chr17:7135887	0.061	0.045	0.222	0.0013%
chr17_7148068_C_T	chr17:7148068	-0.140	-0.102	-0.172	0.0066%
chr17_7156610_G_C	chr17:7156610	-0.139	-0.230	-0.114	0.061%
chr17_7135594_C_A	chr17:7135594	-0.115	-0.208	-0.216	0.012%
chr17_7139019_C_T	chr17:7139019	-0.064	-0.026	-0.216	0.0026%
chr17_7156613_G_T	chr17:7156613	-0.136	-0.291	-0.042	<0.001%
chr17_7135792_G_C	chr17:7135792	0.001	0.174	0.212	1.48%
chr17_7135579_T_C	chr17:7135579	0.082	0.093	0.209	<0.001%
chr17_7135772_T_C	chr17:7135772	0.029	0.075	0.209	<0.001%
chr17_7135792_G_T	chr17:7135792	0.006	0.155	0.209	0.0020%
chr17_7156614_G_C	chr17:7156614	-0.132	-0.115	0.154	<0.001%
chr17_7148073_C_T	chr17:7148073	-0.131	-0.158	-0.175	<0.001%
chr17_7165190_C_G	chr17:7165190	0.112	0.013	0.203	<0.001%
chr17_7165260_T_G	chr17:7165260	-0.127	-0.035	0.000	<0.001%
chr17_7135529_G_C	chr17:7135529	0.110	0.176	0.196	0.0033%
chr17_7135861_T_C	chr17:7135861	0.088	0.075	0.196	<0.001%
chr17_7135884_G_A	chr17:7135884	0.034	0.051	0.196	0.0013%
chr17_7165339_A_G	chr17:7165339	0.060	0.058	0.196	0.0039%
chr17_7156374_T_C	chr17:7156374	0.122	0.240	0.078	<0.001%
chr17_7147956_G_A	chr17:7147956	0.007	0.078	-0.193	28.2%
chr17_7171765_T_G	chr17:7171765	0.046	0.053	0.166	—
chr17_7135622_C_T	chr17:7135622	0.087	0.145	0.190	<0.001%
chr17_7135729_T_C	chr17:7135729	0.120	0.141	0.085	0.0013%
chr17_7135758_A_G	chr17:7135758	0.013	0.034	0.190	<0.001%
chr17_7138967_G_C	chr17:7138967	0.019	0.029	0.190	<0.001%
chr17_7171789_G_C	chr17:7171789	0.067	0.098	0.163	—
chr17_7148018_C_T	chr17:7148018	-0.063	0.019	-0.188	<0.001%
chr17_7135494_T_C	chr17:7135494	-0.103	-0.225	-0.186	0.0020%
chr17_7139648_G_C	chr17:7139648	0.020	0.139	0.186	<0.001%
chr17_7148022_A_G	chr17:7148022	0.097	0.139	0.185	0.0013%
chr17_7135585_C_T	chr17:7135585	-0.060	-0.070	-0.183	0.0072%
chr17_7135590_C_T	chr17:7135590	-0.085	-0.147	-0.183	0.0013%
chr17_7135827_T_G	chr17:7135827	-0.086	-0.075	-0.183	<0.001%
chr17_7165139_G_A	chr17:7165139	-0.065	-0.096	-0.183	<0.001%
chr17_7171696_G_A	chr17:7171696	0.085	0.189	0.157	<0.001%
chr17_7148014_G_T	chr17:7148014	0.115	0.227	0.132	<0.001%
chr17_7171786_G_C	chr17:7171786	0.050	0.063	0.154	—
chr17_7135533_C_T	chr17:7135533	-0.093	-0.133	-0.176	0.0039%
chr17_7135919_G_T	chr17:7135919	0.072	0.065	0.176	<0.001%
chr17_7135474_G_A	chr17:7135474	0.057	0.228	0.173	0.0013%
chr17_7135849_A_T	chr17:7135849	0.108	0.121	0.131	0.0020%
chr17_7156614_G_A	chr17:7156614	-0.106	-0.224	0.016	0.0020%
chr17_7139095_T_C	chr17:7139095	-0.025	0.022	0.163	0.0013%
chr17_7156673_A_G	chr17:7156673	0.021	-0.083	-0.163	6.32%
chr17_7135506_G_A	chr17:7135506	0.101	0.278	0.056	0.0020%
chr17_7135919_G_A	chr17:7135919	0.065	0.064	0.157	0.641%
chr17_7171746_C_G	chr17:7171746	0.040	0.020	0.132	—
chr17_7156601_C_G	chr17:7156601	0.096	0.080	0.013	0.0013%
chr17_7135863_A_G	chr17:7135863	-0.016	-0.080	-0.150	0.0013%
chr17_7135863_A_T	chr17:7135863	-0.025	-0.085	-0.150	0.0020%
chr17_7138998_C_G	chr17:7138998	-0.055	-0.086	-0.150	<0.001%
chr17_7139263_C_A	chr17:7139263	0.003	0.042	0.150	<0.001%
chr17_7165145_A_G	chr17:7165145	-0.082	-0.077	-0.150	0.0026%
chr17_7139627_G_A	chr17:7139627	0.093	0.182	0.085	<0.001%
chr17_7171764_T_G	chr17:7171764	0.022	0.021	0.126	—
chr17_7171819_A_C	chr17:7171819	0.060	0.151	0.126	—
chr17_7156615_G_T	chr17:7156615	0.077	0.070	0.144	0.0094%
chr17_7165258_G_T	chr17:7165258	-0.026	-0.027	-0.144	<0.001%
chr17_7171766_T_G	chr17:7171766	0.026	0.013	0.124	—
chr17_7171796_C_A	chr17:7171796	0.057	0.086	0.124	—
chr17_7171704_C_G	chr17:7171704	0.034	0.065	0.121	—
chr17_7171745_C_G	chr17:7171745	0.048	0.028	0.121	—
chr17_7171764_T_C	chr17:7171764	0.024	0.011	0.121	—
chr17_7171765_T_A	chr17:7171765	0.045	0.033	0.121	—
chr17_7135549_C_T	chr17:7135549	0.087	0.198	0.105	0.0046%
chr17_7135517_G_A	chr17:7135517	-0.045	-0.171	-0.137	<0.001%
chr17_7156415_G_A	chr17:7156415	-0.086	-0.160	-0.078	0.589%
chr17_7171765_T_C	chr17:7171765	0.032	0.015	0.115	—
chr17_7171767_T_G	chr17:7171767	0.024	0.013	0.115	—
chr17_7156395_C_T	chr17:7156395	-0.083	-0.038	-0.052	0.0013%
chr17_7135877_C_T	chr17:7135877	-0.048	-0.080	-0.131	<0.001%
chr17_7171748_C_G	chr17:7171748	0.024	0.019	0.112	<0.001%
chr17_7171780_A_C	chr17:7171780	0.020	-0.014	0.112	—
chr17_7156641_A_G	chr17:7156641	0.081	-0.070	-0.095	12.3%
chr17_7135454_T_C	chr17:7135454	-0.016	-0.010	0.127	0.0020%
chr17_7135489_C_A	chr17:7135489	0.010	0.042	0.127	<0.001%
chr17_7156657_A_G	chr17:7156657	0.080	0.070	-0.072	0.323%
chr17_7171742_C_G	chr17:7171742	0.022	0.003	0.110	—
chr17_7171763_T_G	chr17:7171763	0.013	0.020	0.110	—
chr17_7171773_T_G	chr17:7171773	0.037	0.008	0.110	—
chr17_7171793_C_G	chr17:7171793	0.052	0.067	0.110	—
chr17_7171810_T_G	chr17:7171810	0.048	0.137	0.110	—
chr17_7165228_C_T	chr17:7165228	0.079	0.032	0.026	<0.001%
chr17_7148029_G_A	chr17:7148029	-0.079	-0.042	-0.121	0.0039%
chr17_7135526_A_G	chr17:7135526	0.078	0.083	0.078	<0.001%
chr17_7135605_G_A	chr17:7135605	-0.010	-0.037	-0.124	<0.001%
chr17_7138976_C_T	chr17:7138976	0.053	0.045	0.124	0.0039%
chr17_7156667_A_G	chr17:7156667	0.078	-0.019	-0.065	0.236%
chr17_7171717_C_G	chr17:7171717	0.041	0.035	0.107	<0.001%
chr17_7171749_C_G	chr17:7171749	0.031	0.000	0.107	—
chr17_7171776_T_G	chr17:7171776	0.016	-0.019	0.107	—
chr17_7171782_A_C	chr17:7171782	0.020	0.003	0.107	—
chr17_7171784_A_C	chr17:7171784	0.033	0.008	0.107	—
chr17_7175257_T_C	chr17:7175257	-0.028	-0.013	-0.107	—
chr17_7156613_G_A	chr17:7156613	-0.056	-0.240	0.046	0.0020%
chr17_7171708_C_G	chr17:7171708	0.056	0.063	0.104	—
chr17_7171766_T_C	chr17:7171766	0.023	0.001	0.104	—
chr17_7135537_G_A	chr17:7135537	-0.063	-0.109	-0.118	<0.001%
chr17_7135922_G_A	chr17:7135922	-0.038	-0.056	-0.118	0.0013%
chr17_7165125_G_A	chr17:7165125	-0.008	-0.013	-0.118	<0.001%
chr17_7165381_C_A	chr17:7165381	-0.039	-0.029	-0.118	<0.001%
chr17_7171742_C_A	chr17:7171742	0.021	0.018	0.101	—
chr17_7171766_T_A	chr17:7171766	0.033	0.009	0.101	—
chr17_7171774_T_C	chr17:7171774	0.018	-0.001	0.101	—
chr17_7171774_T_G	chr17:7171774	0.023	-0.001	0.101	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.