Home / Gene

PHRF1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PHRF1

chr11:476,469..712,222, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr11_506418_T_A	chr11:506418	-0.266	-0.610	-1.000	0.020%
chr11_506969_C_T	chr11:506969	0.553	0.843	1.000	0.0020%
chr11_506962_C_T	chr11:506962	0.190	0.409	1.000	<0.001%
chr11_506415_A_G	chr11:506415	-0.155	-0.578	-1.000	<0.001%
chr11_507471_G_T	chr11:507471	0.266	0.179	1.000	0.0020%
chr11_506957_C_A	chr11:506957	0.416	0.486	1.000	0.0013%
chr11_507339_G_A	chr11:507339	0.375	0.193	1.000	<0.001%
chr11_507476_G_A	chr11:507476	0.468	0.214	1.000	<0.001%
chr11_518704_G_A	chr11:518704	-0.741	-0.249	-0.549	<0.001%
chr11_518641_T_C	chr11:518641	0.709	0.355	0.680	0.0020%
chr11_507471_G_C	chr11:507471	0.287	0.150	1.000	<0.001%
chr11_518800_C_T	chr11:518800	-0.272	0.021	1.000	<0.001%
chr11_507305_G_C	chr11:507305	0.260	0.322	1.000	<0.001%
chr11_507434_G_A	chr11:507434	0.076	0.208	1.000	0.0042%
chr11_507475_G_A	chr11:507475	0.334	0.208	1.000	0.092%
chr11_507293_G_T	chr11:507293	0.313	0.297	1.000	<0.001%
chr11_507288_G_A	chr11:507288	0.318	0.331	1.000	<0.001%
chr11_518746_A_T	chr11:518746	0.610	0.235	0.444	<0.001%
chr11_518705_T_G	chr11:518705	-0.505	-0.035	-0.902	0.0013%
chr11_507338_G_C	chr11:507338	-0.049	0.043	0.863	<0.001%
chr11_518511_T_C	chr11:518511	0.544	0.457	0.850	0.0020%
chr11_506958_C_A	chr11:506958	0.223	0.240	0.850	<0.001%
chr11_507476_G_C	chr11:507476	0.381	0.137	0.824	<0.001%
chr11_506950_C_A	chr11:506950	0.190	0.265	0.810	0.0020%
chr11_507275_G_T	chr11:507275	0.173	0.273	0.797	<0.001%
chr11_506404_G_A	chr11:506404	-0.266	-0.355	-0.784	0.0013%
chr11_507477_G_C	chr11:507477	0.330	0.155	0.784	<0.001%
chr11_507469_G_A	chr11:507469	0.311	0.185	0.771	0.0020%
chr11_506397_G_A	chr11:506397	-0.115	-0.195	-0.758	<0.001%
chr11_518605_G_A	chr11:518605	0.466	-0.032	0.353	0.0013%
chr11_506956_C_A	chr11:506956	0.247	0.272	0.732	<0.001%
chr11_518709_G_C	chr11:518709	-0.460	-0.061	-0.261	<0.001%
chr11_507318_C_G	chr11:507318	-0.161	-0.168	-0.725	0.0036%
chr11_506958_C_G	chr11:506958	0.408	0.195	0.719	<0.001%
chr11_518875_T_G	chr11:518875	-0.454	-0.056	-0.431	0.013%
chr11_518623_G_A	chr11:518623	0.449	0.147	0.680	<0.001%
chr11_506354_C_G	chr11:506354	0.447	0.272	0.405	<0.001%
chr11_506949_C_T	chr11:506949	0.144	0.217	0.693	<0.001%
chr11_507113_C_T	chr11:507113	-0.433	-0.117	-0.196	0.011%
chr11_506793_A_C	chr11:506793	0.186	-0.054	-0.680	0.0026%
chr11_506896_A_C	chr11:506896	0.078	-0.211	-0.680	<0.001%
chr11_518636_A_G	chr11:518636	0.159	0.280	0.680	<0.001%
chr11_506792_C_T	chr11:506792	0.227	-0.026	-0.654	<0.001%
chr11_506949_C_G	chr11:506949	0.243	0.243	0.627	0.0039%
chr11_518688_G_C	chr11:518688	0.396	0.104	-0.092	0.018%
chr11_518880_C_A	chr11:518880	-0.396	-0.014	-0.078	0.0047%
chr11_506968_C_G	chr11:506968	0.054	0.252	0.614	0.0020%
chr11_518549_T_A	chr11:518549	0.271	0.176	0.614	0.047%
chr11_518796_C_T	chr11:518796	0.107	-0.038	0.614	0.0020%
chr11_506976_G_A	chr11:506976	-0.384	-0.256	-0.261	0.0060%
chr11_507454_G_A	chr11:507454	-0.072	0.099	0.601	<0.001%
chr11_507501_G_A	chr11:507501	0.068	0.141	0.601	0.0026%
chr11_518803_C_T	chr11:518803	-0.379	-0.065	-0.196	<0.001%
chr11_507458_G_A	chr11:507458	0.153	0.121	0.595	0.0020%
chr11_506923_G_A	chr11:506923	0.062	0.195	0.588	0.0046%
chr11_506962_C_G	chr11:506962	0.025	0.147	0.588	<0.001%
chr11_518862_G_T	chr11:518862	0.367	0.094	0.418	0.128%
chr11_507333_G_T	chr11:507333	0.142	0.133	0.575	0.0013%
chr11_506906_G_T	chr11:506906	-0.021	0.153	0.549	0.0020%
chr11_506936_C_T	chr11:506936	0.120	0.153	0.549	<0.001%
chr11_518800_C_G	chr11:518800	-0.260	-0.153	0.549	<0.001%
chr11_507439_G_C	chr11:507439	0.037	0.123	0.542	0.0057%
chr11_507527_G_T	chr11:507527	-0.035	-0.064	-0.542	<0.001%
chr11_518872_C_T	chr11:518872	-0.334	0.011	-0.092	<0.001%
chr11_518776_G_T	chr11:518776	0.082	0.120	0.523	0.0020%
chr11_507273_G_A	chr11:507273	0.140	0.142	0.516	0.743%
chr11_506373_G_A	chr11:506373	-0.089	-0.185	-0.510	<0.001%
chr11_518767_G_T	chr11:518767	0.037	0.123	0.510	0.0013%
chr11_506394_C_T	chr11:506394	-0.130	-0.144	-0.497	0.0020%
chr11_506797_G_A	chr11:506797	0.289	0.064	-0.497	<0.001%
chr11_507337_G_C	chr11:507337	0.074	0.091	0.490	0.0013%
chr11_506877_G_A	chr11:506877	0.256	-0.249	-0.484	0.0033%
chr11_518769_C_G	chr11:518769	-0.301	0.016	-0.065	0.0013%
chr11_507256_G_A	chr11:507256	-0.173	0.073	0.471	<0.001%
chr11_518621_C_T	chr11:518621	0.293	0.118	0.405	<0.001%
chr11_506880_G_A	chr11:506880	-0.095	-0.230	-0.458	0.851%
chr11_507152_A_C	chr11:507152	-0.280	-0.166	-0.196	0.0020%
chr11_518799_C_A	chr11:518799	-0.280	-0.112	0.222	0.0013%
chr11_518790_G_T	chr11:518790	0.276	0.113	0.209	0.0013%
chr11_507353_G_T	chr11:507353	0.068	0.048	0.431	<0.001%
chr11_507356_G_C	chr11:507356	0.136	0.077	0.431	0.0040%
chr11_518625_C_G	chr11:518625	0.031	-0.003	0.431	0.0026%
chr11_518838_C_A	chr11:518838	0.091	0.115	0.431	<0.001%
chr11_507005_G_A	chr11:507005	-0.268	-0.142	0.098	<0.001%
chr11_506386_T_C	chr11:506386	-0.144	-0.204	-0.418	0.0013%
chr11_507432_G_A	chr11:507432	0.103	0.069	0.418	0.036%
chr11_507452_A_G	chr11:507452	-0.103	-0.083	-0.418	<0.001%
chr11_518613_C_T	chr11:518613	0.262	0.117	0.301	0.0020%
chr11_494828_C_T	chr11:494828	-0.008	0.073	0.405	0.0039%
chr11_506996_C_G	chr11:506996	-0.058	-0.062	-0.405	<0.001%
chr11_518847_C_T	chr11:518847	-0.037	0.026	0.405	<0.001%
chr11_507233_G_A	chr11:507233	0.252	0.152	0.222	0.0013%
chr11_518591_G_C	chr11:518591	-0.248	-0.077	-0.131	<0.001%
chr11_494863_C_T	chr11:494863	0.008	0.091	0.392	0.0033%
chr11_507265_A_G	chr11:507265	-0.021	-0.117	-0.392	<0.001%
chr11_507455_C_T	chr11:507455	0.085	0.070	0.392	<0.001%
chr11_507474_C_A	chr11:507474	0.052	0.032	0.392	0.0013%
chr11_518863_A_G	chr11:518863	-0.223	-0.105	-0.392	0.0013%
chr11_518867_G_C	chr11:518867	-0.247	-0.064	-0.314	<0.001%
chr11_518881_G_C	chr11:518881	-0.247	0.045	-0.261	0.050%
chr11_507109_T_C	chr11:507109	-0.243	-0.081	0.000	<0.001%
chr11_506303_G_T	chr11:506303	-0.105	-0.099	-0.379	<0.001%
chr11_506416_T_C	chr11:506416	0.144	0.105	0.379	0.0026%
chr11_506936_C_A	chr11:506936	-0.021	0.067	0.379	0.0013%
chr11_507460_C_A	chr11:507460	0.095	0.094	0.379	<0.001%
chr11_518784_G_C	chr11:518784	-0.219	-0.109	-0.379	<0.001%
chr11_518792_G_A	chr11:518792	0.025	0.080	0.379	0.0053%
chr11_506879_C_A	chr11:506879	0.029	-0.565	-0.366	<0.001%
chr11_507216_C_A	chr11:507216	0.045	0.019	0.366	<0.001%
chr11_518748_C_T	chr11:518748	0.138	0.113	0.366	<0.001%
chr11_518773_G_A	chr11:518773	0.062	0.085	0.366	<0.001%
chr11_518802_C_A	chr11:518802	-0.107	0.110	0.366	0.0026%
chr11_518818_G_T	chr11:518818	0.153	0.073	0.366	<0.001%
chr11_518844_A_C	chr11:518844	-0.107	-0.094	-0.366	<0.001%
chr11_506841_T_C	chr11:506841	0.227	-0.147	-0.131	0.018%
chr11_507238_T_G	chr11:507238	-0.227	-0.070	-0.209	0.0034%
chr11_518738_C_T	chr11:518738	-0.227	0.030	-0.013	<0.001%
chr11_518846_G_C	chr11:518846	-0.227	-0.010	-0.105	<0.001%
chr11_506826_G_C	chr11:506826	0.223	0.089	0.078	11.4%
chr11_507131_C_A	chr11:507131	0.223	0.280	0.131	0.0020%
chr11_518752_C_A	chr11:518752	-0.002	0.102	0.353	0.099%
chr11_518793_G_A	chr11:518793	-0.223	0.014	0.261	<0.001%
chr11_518767_G_C	chr11:518767	-0.221	-0.061	0.078	<0.001%
chr11_506845_G_A	chr11:506845	0.219	-0.064	0.157	<0.001%
chr11_507301_G_C	chr11:507301	0.033	0.085	0.340	0.0079%
chr11_507528_C_T	chr11:507528	0.010	0.062	0.340	<0.001%
chr11_518750_G_A	chr11:518750	0.041	0.078	0.340	<0.001%
chr11_518777_C_T	chr11:518777	0.124	0.115	0.340	0.0026%
chr11_518849_C_A	chr11:518849	-0.004	0.083	0.340	<0.001%
chr11_518593_G_A	chr11:518593	0.213	0.048	0.301	<0.001%
chr11_507034_C_T	chr11:507034	0.054	0.037	0.333	0.0099%
chr11_507263_T_G	chr11:507263	-0.210	-0.042	-0.098	<0.001%
chr11_518691_C_G	chr11:518691	0.210	-0.026	0.157	0.0013%
chr11_494811_G_C	chr11:494811	-0.045	-0.088	-0.327	0.0013%
chr11_506357_G_A	chr11:506357	0.179	0.313	0.327	<0.001%
chr11_507486_G_A	chr11:507486	0.109	0.062	0.327	<0.001%
chr11_518542_C_G	chr11:518542	0.140	0.169	0.327	0.0020%
chr11_518681_C_G	chr11:518681	0.079	0.120	0.327	0.0013%
chr11_518714_A_G	chr11:518714	-0.206	-0.045	-0.118	0.0072%
chr11_518735_G_C	chr11:518735	-0.095	-0.195	-0.327	0.0039%
chr11_518749_C_T	chr11:518749	0.054	0.075	0.327	0.035%
chr11_518768_A_G	chr11:518768	-0.074	-0.069	-0.327	<0.001%
chr11_518807_A_G	chr11:518807	-0.087	-0.105	-0.327	<0.001%
chr11_518860_G_A	chr11:518860	0.161	0.081	0.327	0.0013%
chr11_494822_C_G	chr11:494822	-0.016	0.030	0.320	0.0033%
chr11_507002_C_T	chr11:507002	0.070	0.059	0.320	0.017%
chr11_507030_A_G	chr11:507030	-0.091	-0.099	-0.320	0.0020%
chr11_507553_C_G	chr11:507553	0.113	0.065	0.320	0.0033%
chr11_506430_G_A	chr11:506430	-0.091	-0.118	-0.314	0.0013%
chr11_506808_A_T	chr11:506808	-0.052	-0.300	0.314	<0.001%
chr11_518769_C_T	chr11:518769	-0.029	0.034	0.314	0.0020%
chr11_518789_C_T	chr11:518789	0.095	0.094	0.314	0.0046%
chr11_518850_G_T	chr11:518850	0.037	0.067	0.314	0.0013%
chr11_518859_C_G	chr11:518859	-0.194	-0.048	-0.144	0.800%
chr11_494913_C_T	chr11:494913	0.084	0.097	0.301	0.011%
chr11_507078_T_C	chr11:507078	-0.066	-0.112	-0.301	0.0013%
chr11_518622_C_T	chr11:518622	0.115	0.088	0.301	0.0013%
chr11_518667_C_A	chr11:518667	-0.190	-0.131	-0.105	<0.001%
chr11_518688_G_A	chr11:518688	0.190	0.037	-0.118	0.014%
chr11_518755_C_T	chr11:518755	0.002	0.051	0.301	0.0026%
chr11_518795_G_C	chr11:518795	-0.091	0.121	0.301	<0.001%
chr11_494914_G_A	chr11:494914	0.074	0.067	0.294	0.0053%
chr11_518798_C_T	chr11:518798	-0.186	-0.104	0.092	0.0013%
chr11_506330_G_A	chr11:506330	0.126	0.278	0.288	<0.001%
chr11_506538_C_A	chr11:506538	0.076	0.035	0.288	<0.001%
chr11_506697_G_A	chr11:506697	-0.047	-0.096	-0.288	0.0013%
chr11_506885_C_G	chr11:506885	-0.095	-0.109	-0.288	<0.001%
chr11_506954_G_A	chr11:506954	0.103	0.038	0.288	0.0026%
chr11_506955_A_G	chr11:506955	0.181	-0.022	0.078	0.0013%
chr11_507218_G_A	chr11:507218	0.181	0.073	0.092	<0.001%
chr11_507286_T_G	chr11:507286	-0.029	-0.040	-0.288	0.122%
chr11_507441_T_C	chr11:507441	-0.056	-0.048	-0.288	0.0090%
chr11_507493_G_C	chr11:507493	-0.004	0.014	0.288	<0.001%
chr11_518772_G_T	chr11:518772	0.070	0.053	0.288	<0.001%
chr11_518779_G_T	chr11:518779	0.165	0.062	0.288	0.0039%
chr11_518880_C_T	chr11:518880	0.124	0.081	0.288	0.0020%
chr11_518709_G_A	chr11:518709	-0.179	0.022	0.065	<0.001%
chr11_495021_C_T	chr11:495021	0.000	-0.069	-0.281	<0.001%
chr11_507033_C_T	chr11:507033	-0.033	0.016	0.281	0.0020%
chr11_507184_G_A	chr11:507184	0.177	0.110	0.144	<0.001%
chr11_507199_C_A	chr11:507199	-0.062	0.014	-0.281	<0.001%
chr11_507266_G_T	chr11:507266	0.004	0.002	0.281	<0.001%
chr11_507482_G_A	chr11:507482	0.068	0.054	0.281	<0.001%
chr11_506377_C_T	chr11:506377	-0.080	-0.115	-0.275	<0.001%
chr11_506747_C_T	chr11:506747	-0.060	-0.093	-0.275	0.669%
chr11_506902_G_A	chr11:506902	-0.016	-0.022	0.275	<0.001%
chr11_507171_C_T	chr11:507171	0.173	0.126	0.085	<0.001%
chr11_507180_G_A	chr11:507180	-0.124	-0.078	-0.275	0.0013%
chr11_518541_T_G	chr11:518541	0.056	0.067	0.275	0.0013%
chr11_518754_C_T	chr11:518754	0.120	0.061	0.275	<0.001%
chr11_518779_G_A	chr11:518779	0.099	0.075	0.275	0.0085%
chr11_518816_G_A	chr11:518816	0.128	0.073	0.275	0.018%
chr11_518885_G_A	chr11:518885	0.041	0.073	0.275	0.0028%
chr11_518650_G_A	chr11:518650	-0.170	-0.053	-0.261	0.0053%
chr11_518575_C_T	chr11:518575	0.170	-0.061	0.052	0.0013%
chr11_507319_G_T	chr11:507319	0.066	0.070	0.268	<0.001%
chr11_518808_T_C	chr11:518808	0.169	0.053	0.065	9.78%
chr11_518820_C_G	chr11:518820	-0.169	-0.038	-0.052	0.0013%
chr11_518632_C_A	chr11:518632	0.167	0.125	0.092	0.585%
chr11_518654_T_A	chr11:518654	-0.167	-0.104	-0.222	0.0013%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.