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PIF1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near PIF1

chr15:64,715,634..64,925,647, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr15_64732662_G_A	chr15:64732662	-1.000	-1.000	-1.000	0.0020%
chr15_64731462_G_C	chr15:64731462	-1.000	-0.003	-1.000	<0.001%
chr15_64732694_C_G	chr15:64732694	-1.000	-1.000	-1.000	<0.001%
chr15_64731185_G_A	chr15:64731185	1.000	1.000	1.000	0.0013%
chr15_64732662_G_T	chr15:64732662	-1.000	-1.000	-1.000	<0.001%
chr15_64731465_G_A	chr15:64731465	-1.000	-0.150	-1.000	<0.001%
chr15_64732738_A_G	chr15:64732738	-1.000	-1.000	-1.000	<0.001%
chr15_64732665_C_T	chr15:64732665	-1.000	-1.000	-1.000	<0.001%
chr15_64732694_C_T	chr15:64732694	-1.000	-1.000	-1.000	0.0033%
chr15_64732741_A_G	chr15:64732741	-1.000	-1.000	-0.853	0.0013%
chr15_64732691_G_A	chr15:64732691	-1.000	-1.000	-0.771	<0.001%
chr15_64732642_T_G	chr15:64732642	-1.000	-1.000	-1.000	<0.001%
chr15_64731467_C_T	chr15:64731467	-1.000	0.008	-0.753	<0.001%
chr15_64728382_C_T	chr15:64728382	-1.000	-0.367	-0.906	<0.001%
chr15_64732733_G_T	chr15:64732733	-1.000	-1.000	-0.718	<0.001%
chr15_64732826_G_C	chr15:64732826	0.993	0.855	0.618	<0.001%
chr15_64732744_A_G	chr15:64732744	-0.952	-1.000	-0.335	<0.001%
chr15_64732750_G_C	chr15:64732750	-0.858	-0.807	-0.682	<0.001%
chr15_64732732_T_C	chr15:64732732	-0.856	-0.812	-0.618	<0.001%
chr15_64728380_C_T	chr15:64728380	-0.847	-0.282	-0.624	<0.001%
chr15_64732625_T_C	chr15:64732625	-0.812	-1.000	-0.482	<0.001%
chr15_64728381_C_A	chr15:64728381	-0.790	-0.216	-0.435	0.0013%
chr15_64731260_T_A	chr15:64731260	-0.745	-1.000	-0.712	30.4%
chr15_64732718_G_A	chr15:64732718	-0.725	-0.807	-0.647	0.0026%
chr15_64732648_A_C	chr15:64732648	0.679	0.563	0.500	<0.001%
chr15_64764150_C_G	chr15:64764150	0.614	0.741	0.906	<0.001%
chr15_64764151_C_A	chr15:64764151	0.592	0.817	0.741	0.0013%
chr15_64731303_G_A	chr15:64731303	-0.556	-0.576	-0.388	<0.001%
chr15_64731273_G_A	chr15:64731273	-0.546	-0.416	-0.388	0.0020%
chr15_64732632_A_G	chr15:64732632	-0.531	-0.558	-0.224	<0.001%
chr15_64732757_T_C	chr15:64732757	-0.524	-0.528	-0.300	<0.001%
chr15_64732671_G_A	chr15:64732671	-0.517	-0.612	-0.418	<0.001%
chr15_64732843_T_C	chr15:64732843	-0.510	-0.508	-0.241	<0.001%
chr15_64732707_C_T	chr15:64732707	0.466	0.657	0.329	<0.001%
chr15_64732652_A_G	chr15:64732652	-0.459	-0.442	-0.324	<0.001%
chr15_64731459_C_T	chr15:64731459	-0.438	0.081	-0.235	<0.001%
chr15_64731468_G_A	chr15:64731468	-0.424	0.023	-0.435	0.0059%
chr15_64716701_G_A	chr15:64716701	0.256	0.270	0.741	<0.001%
chr15_64731299_G_T	chr15:64731299	-0.416	-0.495	-0.282	0.0013%
chr15_64731833_G_T	chr15:64731833	0.403	0.387	0.465	<0.001%
chr15_64732639_G_A	chr15:64732639	-0.403	-0.706	-0.141	0.0026%
chr15_64732626_T_C	chr15:64732626	-0.398	-0.569	-0.400	<0.001%
chr15_64764151_C_T	chr15:64764151	0.398	0.464	0.588	0.012%
chr15_64732672_C_T	chr15:64732672	-0.386	-0.594	-0.447	0.0020%
chr15_64731246_A_G	chr15:64731246	-0.376	-0.619	-0.171	0.0026%
chr15_64731240_T_C	chr15:64731240	0.373	0.477	0.294	0.0059%
chr15_64731476_A_G	chr15:64731476	-0.366	0.168	0.188	<0.001%
chr15_64732731_A_G	chr15:64732731	-0.366	-0.272	-0.176	0.0013%
chr15_64716707_G_C	chr15:64716707	0.276	0.242	0.629	<0.001%
chr15_64732799_C_T	chr15:64732799	0.348	0.424	0.094	0.0066%
chr15_64731413_G_T	chr15:64731413	-0.326	-0.069	-0.118	0.0020%
chr15_64732622_T_C	chr15:64732622	-0.313	-0.513	-0.218	<0.001%
chr15_64731467_C_A	chr15:64731467	-0.309	-0.013	-0.447	0.0013%
chr15_64731298_G_C	chr15:64731298	-0.306	-0.330	-0.171	<0.001%
chr15_64732610_G_A	chr15:64732610	0.298	0.249	0.200	<0.001%
chr15_64732763_C_A	chr15:64732763	-0.296	-0.462	0.006	0.0013%
chr15_64750109_G_A	chr15:64750109	0.183	0.221	0.518	0.012%
chr15_64731229_A_G	chr15:64731229	-0.291	-0.335	-0.171	0.0066%
chr15_64716655_A_T	chr15:64716655	-0.119	-0.114	-0.512	0.011%
chr15_64764086_A_G	chr15:64764086	0.287	0.360	0.465	<0.001%
chr15_64732804_A_G	chr15:64732804	-0.279	-0.381	-0.124	<0.001%
chr15_64731315_C_G	chr15:64731315	-0.276	-0.244	-0.247	<0.001%
chr15_64731239_A_G	chr15:64731239	0.273	0.355	0.188	0.0026%
chr15_64731362_A_C	chr15:64731362	0.273	0.155	0.259	0.048%
chr15_64716649_A_G	chr15:64716649	-0.090	-0.089	-0.476	0.032%
chr15_64732712_G_A	chr15:64732712	0.269	0.297	0.082	0.0033%
chr15_64751494_A_T	chr15:64751494	-0.004	0.132	0.435	<0.001%
chr15_64732742_T_C	chr15:64732742	0.246	0.261	0.241	<0.001%
chr15_64740682_G_A	chr15:64740682	0.243	0.254	0.341	0.0033%
chr15_64732635_G_T	chr15:64732635	0.241	0.320	0.194	<0.001%
chr15_64731225_C_G	chr15:64731225	0.238	0.307	0.171	0.032%
chr15_64731228_T_C	chr15:64731228	0.228	0.165	0.229	0.0046%
chr15_64732730_C_G	chr15:64732730	0.224	0.261	0.235	0.0066%
chr15_64732774_T_C	chr15:64732774	-0.222	-0.345	-0.141	<0.001%
chr15_64732572_T_G	chr15:64732572	0.220	0.355	0.318	0.0033%
chr15_64740685_G_C	chr15:64740685	-0.200	-0.244	-0.388	0.063%
chr15_64740681_C_T	chr15:64740681	-0.204	-0.148	-0.382	0.0020%
chr15_64732814_C_T	chr15:64732814	-0.214	-0.231	-0.206	0.0013%
chr15_64731286_A_G	chr15:64731286	0.213	0.211	0.188	<0.001%
chr15_64731375_T_G	chr15:64731375	0.213	0.091	0.235	0.023%
chr15_64732611_G_C	chr15:64732611	0.213	0.107	-0.012	0.0020%
chr15_64732751_C_T	chr15:64732751	-0.213	-0.178	-0.171	<0.001%
chr15_64751519_G_C	chr15:64751519	0.169	0.391	0.376	<0.001%
chr15_64764027_G_A	chr15:64764027	0.210	0.289	0.306	0.0013%
chr15_64732585_C_T	chr15:64732585	0.210	0.223	0.047	<0.001%
chr15_64764114_G_C	chr15:64764114	-0.210	-0.231	-0.318	<0.001%
chr15_64731322_C_A	chr15:64731322	-0.203	-0.188	-0.171	<0.001%
chr15_64731525_C_A	chr15:64731525	0.200	0.038	0.118	<0.001%
chr15_64728307_T_C	chr15:64728307	0.106	0.030	0.347	0.033%
chr15_64764108_G_A	chr15:64764108	0.196	0.239	0.241	<0.001%
chr15_64764093_T_A	chr15:64764093	0.193	0.264	0.288	<0.001%
chr15_64732825_C_T	chr15:64732825	0.193	0.226	-0.012	<0.001%
chr15_64751643_A_T	chr15:64751643	0.159	0.244	0.335	0.0072%
chr15_64740710_C_T	chr15:64740710	-0.042	-0.036	-0.324	1.23%
chr15_64751639_C_A	chr15:64751639	0.118	0.264	0.324	<0.001%
chr15_64731316_G_A	chr15:64731316	-0.180	-0.142	-0.212	0.0033%
chr15_64751519_G_A	chr15:64751519	0.175	0.381	0.318	<0.001%
chr15_64716712_G_A	chr15:64716712	0.116	0.107	0.312	<0.001%
chr15_64732573_C_T	chr15:64732573	0.176	0.213	0.024	0.0013%
chr15_64732826_G_A	chr15:64732826	-0.171	-0.170	-0.235	0.0013%
chr15_64731262_A_C	chr15:64731262	-0.170	-0.272	-0.147	<0.001%
chr15_64740544_G_C	chr15:64740544	0.012	0.062	0.300	0.671%
chr15_64731171_G_A	chr15:64731171	-0.166	-0.188	-0.171	0.0013%
chr15_64732673_G_A	chr15:64732673	0.166	0.112	0.071	0.0013%
chr15_64732837_C_G	chr15:64732837	-0.166	-0.127	-0.159	<0.001%
chr15_64731459_C_G	chr15:64731459	-0.165	-0.030	-0.118	<0.001%
chr15_64732779_A_G	chr15:64732779	0.164	0.251	0.100	<0.001%
chr15_64731314_G_T	chr15:64731314	-0.163	-0.150	-0.224	<0.001%
chr15_64763987_G_A	chr15:64763987	0.162	0.183	0.194	<0.001%
chr15_64731523_C_T	chr15:64731523	-0.158	-0.053	-0.212	4.95%
chr15_64731429_T_A	chr15:64731429	0.156	0.005	0.012	0.0013%
chr15_64764152_G_A	chr15:64764152	-0.140	-0.165	-0.276	0.0046%
chr15_64728339_G_A	chr15:64728339	-0.152	-0.046	-0.182	0.0033%
chr15_64740686_G_C	chr15:64740686	-0.151	-0.133	-0.106	<0.001%
chr15_64731339_T_C	chr15:64731339	0.150	0.117	0.118	0.0013%
chr15_64731511_C_A	chr15:64731511	-0.150	-0.112	-0.224	<0.001%
chr15_64764103_G_A	chr15:64764103	-0.150	-0.170	-0.265	<0.001%
chr15_64764133_A_G	chr15:64764133	-0.141	-0.208	-0.259	<0.001%
chr15_64731423_G_C	chr15:64731423	0.143	0.091	0.082	<0.001%
chr15_64740598_G_C	chr15:64740598	-0.012	0.014	0.253	<0.001%
chr15_64751652_C_T	chr15:64751652	0.143	0.277	0.224	<0.001%
chr15_64764029_G_C	chr15:64764029	-0.141	-0.175	-0.224	0.0013%
chr15_64764076_C_T	chr15:64764076	-0.116	-0.141	-0.247	<0.001%
chr15_64728465_T_C	chr15:64728465	0.033	0.018	0.244	0.0072%
chr15_64764061_G_A	chr15:64764061	0.138	0.147	0.124	<0.001%
chr15_64732464_A_T	chr15:64732464	0.136	0.048	0.129	<0.001%
chr15_64751603_G_A	chr15:64751603	-0.093	-0.175	-0.241	<0.001%
chr15_64732800_G_A	chr15:64732800	-0.136	-0.170	-0.182	0.791%
chr15_64731293_A_T	chr15:64731293	-0.133	-0.140	0.024	<0.001%
chr15_64731318_G_T	chr15:64731318	-0.133	-0.096	-0.106	<0.001%
chr15_64732835_G_A	chr15:64732835	-0.131	-0.091	-0.153	<0.001%
chr15_64731409_G_A	chr15:64731409	-0.130	0.041	-0.118	6.25%
chr15_64732678_C_T	chr15:64732678	-0.094	-0.338	-0.229	<0.001%
chr15_64764128_G_C	chr15:64764128	-0.128	-0.244	-0.171	0.0013%
chr15_64716656_G_T	chr15:64716656	-0.047	-0.047	-0.224	0.0072%
chr15_64731405_T_G	chr15:64731405	-0.126	-0.056	-0.012	<0.001%
chr15_64731539_A_C	chr15:64731539	0.121	0.005	0.212	<0.001%
chr15_64732667_G_C	chr15:64732667	0.120	0.213	0.124	<0.001%
chr15_64764110_G_A	chr15:64764110	-0.108	-0.142	-0.212	0.125%
chr15_64716631_T_C	chr15:64716631	-0.067	-0.071	-0.206	0.0020%
chr15_64731888_C_G	chr15:64731888	0.104	0.154	0.206	<0.001%
chr15_64740711_G_A	chr15:64740711	0.116	0.057	0.047	0.011%
chr15_64732570_C_T	chr15:64732570	-0.115	-0.066	0.012	0.0013%
chr15_64716673_A_G	chr15:64716673	0.047	0.034	0.200	0.0013%
chr15_64731527_T_A	chr15:64731527	0.113	0.018	0.047	<0.001%
chr15_64728292_C_T	chr15:64728292	-0.111	-0.020	-0.106	<0.001%
chr15_64750261_T_A	chr15:64750261	0.111	-0.020	0.006	<0.001%
chr15_64731488_C_T	chr15:64731488	0.108	0.071	-0.024	0.0020%
chr15_64732808_C_G	chr15:64732808	0.108	0.074	0.071	<0.001%
chr15_64716583_T_G	chr15:64716583	0.067	0.039	0.188	0.031%
chr15_64716664_T_C	chr15:64716664	0.064	0.066	0.188	<0.001%
chr15_64731796_C_T	chr15:64731796	-0.077	-0.091	-0.188	0.0033%
chr15_64731837_C_A	chr15:64731837	0.106	0.095	0.041	<0.001%
chr15_64751463_C_G	chr15:64751463	-0.021	-0.003	0.188	<0.001%
chr15_64751540_G_A	chr15:64751540	0.057	0.135	0.188	<0.001%
chr15_64732370_G_C	chr15:64732370	0.105	0.051	0.029	<0.001%
chr15_64731367_T_C	chr15:64731367	0.103	0.063	0.106	<0.001%
chr15_64764122_C_T	chr15:64764122	-0.095	-0.124	-0.182	0.011%
chr15_64732341_A_C	chr15:64732341	-0.101	-0.105	-0.112	<0.001%
chr15_64740598_G_A	chr15:64740598	-0.101	-0.029	0.159	<0.001%
chr15_64732820_A_G	chr15:64732820	-0.100	-0.096	0.053	<0.001%
chr15_64732381_C_T	chr15:64732381	-0.100	-0.077	-0.141	0.0072%
chr15_64732783_G_A	chr15:64732783	0.098	0.074	0.106	0.0026%
chr15_64728469_G_C	chr15:64728469	0.097	0.008	0.171	<0.001%
chr15_64751607_A_C	chr15:64751607	-0.033	-0.099	-0.171	0.0013%
chr15_64763966_C_T	chr15:64763966	-0.072	-0.085	-0.171	<0.001%
chr15_64728475_G_C	chr15:64728475	0.095	0.003	0.094	0.0033%
chr15_64716711_G_A	chr15:64716711	0.063	0.072	0.165	0.0079%
chr15_64716714_G_A	chr15:64716714	0.067	0.052	0.165	<0.001%
chr15_64731217_A_G	chr15:64731217	-0.093	-0.091	0.047	<0.001%
chr15_64731393_G_A	chr15:64731393	-0.090	0.000	-0.165	<0.001%
chr15_64732568_A_T	chr15:64732568	0.040	0.096	0.165	0.0013%
chr15_64732569_T_A	chr15:64732569	0.040	0.137	0.165	0.0013%
chr15_64732675_G_A	chr15:64732675	0.093	0.015	0.018	0.0098%
chr15_64732860_T_A	chr15:64732860	-0.092	-0.117	-0.041	0.0098%
chr15_64728353_A_G	chr15:64728353	0.092	0.033	0.065	<0.001%
chr15_64764077_G_C	chr15:64764077	-0.092	-0.096	-0.088	0.0046%
chr15_64728306_C_G	chr15:64728306	-0.002	-0.010	0.159	0.0026%
chr15_64731891_T_C	chr15:64731891	0.061	0.089	0.159	0.0053%
chr15_64732385_A_G	chr15:64732385	-0.005	0.013	0.159	<0.001%
chr15_64750440_G_C	chr15:64750440	0.009	-0.043	-0.153	0.0020%
chr15_64731853_G_T	chr15:64731853	-0.085	-0.117	-0.100	<0.001%
chr15_64728284_C_G	chr15:64728284	-0.084	-0.013	-0.076	0.0013%
chr15_64732780_T_C	chr15:64732780	0.084	0.183	0.124	0.018%
chr15_64731383_T_C	chr15:64731383	0.083	-0.015	0.047	0.027%
chr15_64731444_G_A	chr15:64731444	0.083	0.005	-0.024	<0.001%
chr15_64731537_T_A	chr15:64731537	0.083	0.132	0.047	<0.001%
chr15_64731938_C_T	chr15:64731938	-0.026	-0.032	-0.147	0.0013%
chr15_64764051_C_G	chr15:64764051	0.083	0.093	0.147	0.0033%
chr15_64731591_G_C	chr15:64731591	0.082	0.018	0.071	<0.001%
chr15_64732598_A_T	chr15:64732598	-0.082	-0.020	-0.094	<0.001%
chr15_64731314_G_A	chr15:64731314	0.080	0.081	-0.035	0.0039%
chr15_64751503_C_T	chr15:64751503	0.008	0.170	0.141	0.012%
chr15_64751647_A_C	chr15:64751647	0.046	0.091	0.141	0.0013%
chr15_64732474_C_G	chr15:64732474	-0.078	-0.066	-0.082	<0.001%
chr15_64728459_G_A	chr15:64728459	0.077	0.019	0.024	0.061%
chr15_64731413_G_A	chr15:64731413	-0.077	-0.051	0.094	0.0085%
chr15_64731498_C_G	chr15:64731498	0.077	0.020	0.094	<0.001%
chr15_64731554_G_C	chr15:64731554	0.077	0.043	0.071	<0.001%
chr15_64731959_G_A	chr15:64731959	-0.044	-0.033	-0.135	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.