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PLEKHN1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PLEKHN1
chr1:866,481..1,075,865, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_904299_G_A | chr1:904299 | 0.235 | 0.379 | 1.000 | 0.0013% |
| chr1_912972_G_A | chr1:912972 | 0.949 | 0.797 | 1.000 | <0.001% |
| chr1_904301_G_C | chr1:904301 | 0.253 | 0.327 | 1.000 | <0.001% |
| chr1_904707_A_C | chr1:904707 | -1.000 | -0.181 | -1.000 | 0.0028% |
| chr1_904307_G_A | chr1:904307 | 0.318 | 0.322 | 1.000 | 0.0028% |
| chr1_869922_C_T | chr1:869922 | -1.000 | -0.414 | -1.000 | 0.0020% |
| chr1_904306_G_T | chr1:904306 | 0.246 | 0.293 | 1.000 | <0.001% |
| chr1_912970_C_T | chr1:912970 | 0.777 | 0.706 | 1.000 | 0.0013% |
| chr1_921208_C_G | chr1:921208 | -0.618 | -0.369 | -1.000 | — |
| chr1_913018_G_C | chr1:913018 | 0.543 | 0.514 | 1.000 | 0.0013% |
| chr1_921194_C_G | chr1:921194 | 0.794 | 0.369 | 1.000 | — |
| chr1_904778_G_C | chr1:904778 | -0.977 | -0.068 | -1.000 | <0.001% |
| chr1_904694_G_A | chr1:904694 | 0.905 | 0.267 | 0.719 | 0.0021% |
| chr1_921199_C_T | chr1:921199 | -0.523 | -0.292 | -1.000 | — |
| chr1_921205_C_G | chr1:921205 | -0.535 | -0.326 | -1.000 | 0.0013% |
| chr1_906992_A_G | chr1:906992 | 0.129 | 0.313 | 1.000 | 0.0013% |
| chr1_921196_T_G | chr1:921196 | 0.693 | 0.427 | 0.930 | — |
| chr1_921203_G_A | chr1:921203 | 0.692 | 0.302 | 0.819 | 1.52% |
| chr1_921198_C_T | chr1:921198 | -0.470 | -0.293 | -1.000 | 0.0033% |
| chr1_921199_C_G | chr1:921199 | -0.517 | -0.312 | -1.000 | — |
| chr1_921235_G_C | chr1:921235 | -0.575 | -0.295 | -1.000 | — |
| chr1_921201_C_A | chr1:921201 | -0.460 | -0.287 | -1.000 | — |
| chr1_921206_G_A | chr1:921206 | -0.560 | -0.307 | -1.000 | 0.0026% |
| chr1_921207_G_T | chr1:921207 | -0.545 | -0.280 | -1.000 | — |
| chr1_904732_G_A | chr1:904732 | 0.811 | 0.170 | 0.725 | 0.0013% |
| chr1_921198_C_A | chr1:921198 | -0.454 | -0.270 | -1.000 | — |
| chr1_921207_G_A | chr1:921207 | -0.536 | -0.266 | -1.000 | — |
| chr1_921206_G_T | chr1:921206 | -0.513 | -0.312 | -1.000 | 0.0033% |
| chr1_921194_C_A | chr1:921194 | 0.628 | 0.298 | 0.836 | — |
| chr1_913005_T_C | chr1:913005 | 0.495 | 0.300 | 1.000 | 0.0013% |
| chr1_921197_C_A | chr1:921197 | -0.356 | -0.243 | -1.000 | <0.001% |
| chr1_921200_T_A | chr1:921200 | -0.459 | -0.301 | -1.000 | — |
| chr1_921202_T_A | chr1:921202 | -0.453 | -0.273 | -1.000 | <0.001% |
| chr1_921212_A_G | chr1:921212 | -0.398 | -0.234 | -1.000 | — |
| chr1_921197_C_T | chr1:921197 | -0.339 | -0.214 | -1.000 | — |
| chr1_921207_G_C | chr1:921207 | -0.529 | -0.275 | -1.000 | — |
| chr1_921198_C_G | chr1:921198 | -0.431 | -0.264 | -1.000 | — |
| chr1_921201_C_T | chr1:921201 | -0.451 | -0.261 | -1.000 | — |
| chr1_870017_C_T | chr1:870017 | 0.729 | 0.324 | 0.869 | <0.001% |
| chr1_921193_T_C | chr1:921193 | -0.397 | -0.214 | -1.000 | — |
| chr1_921202_T_G | chr1:921202 | -0.434 | -0.267 | -1.000 | — |
| chr1_921204_G_A | chr1:921204 | -0.424 | -0.272 | -1.000 | — |
| chr1_921205_C_A | chr1:921205 | -0.420 | -0.267 | -0.965 | — |
| chr1_921199_C_A | chr1:921199 | -0.380 | -0.241 | -0.959 | — |
| chr1_904780_G_A | chr1:904780 | -0.672 | -0.046 | -0.654 | 0.0026% |
| chr1_906914_C_T | chr1:906914 | -0.276 | -0.144 | -1.000 | 0.0013% |
| chr1_921201_C_G | chr1:921201 | -0.390 | -0.237 | -0.936 | — |
| chr1_921200_T_G | chr1:921200 | -0.408 | -0.258 | -0.924 | — |
| chr1_904309_G_C | chr1:904309 | 0.130 | 0.138 | 1.000 | <0.001% |
| chr1_921202_T_C | chr1:921202 | -0.363 | -0.236 | -0.848 | <0.001% |
| chr1_921203_G_C | chr1:921203 | -0.454 | -0.225 | -0.825 | — |
| chr1_921219_C_G | chr1:921219 | -0.429 | -0.191 | -0.813 | — |
| chr1_869776_C_G | chr1:869776 | 0.340 | 0.161 | 0.899 | <0.001% |
| chr1_921232_C_G | chr1:921232 | 0.445 | 0.193 | 0.573 | — |
| chr1_870113_G_A | chr1:870113 | 0.419 | 0.631 | 0.873 | <0.001% |
| chr1_870019_C_A | chr1:870019 | 0.545 | 0.299 | 0.765 | <0.001% |
| chr1_921196_T_C | chr1:921196 | -0.281 | -0.194 | -0.772 | — |
| chr1_869777_C_A | chr1:869777 | 0.237 | 0.134 | 0.837 | <0.001% |
| chr1_921197_C_G | chr1:921197 | -0.252 | -0.180 | -0.743 | — |
| chr1_921204_G_T | chr1:921204 | -0.310 | -0.190 | -0.731 | — |
| chr1_913039_G_T | chr1:913039 | -0.147 | -0.214 | -0.797 | <0.001% |
| chr1_870069_C_A | chr1:870069 | 0.296 | 0.267 | 0.791 | <0.001% |
| chr1_904721_C_T | chr1:904721 | 0.391 | 0.099 | 0.784 | <0.001% |
| chr1_906982_C_T | chr1:906982 | -0.150 | -0.043 | -0.784 | 22.9% |
| chr1_913034_G_A | chr1:913034 | -0.143 | -0.200 | -0.778 | <0.001% |
| chr1_904836_C_T | chr1:904836 | 0.488 | 0.083 | 0.464 | 0.0013% |
| chr1_904808_C_T | chr1:904808 | 0.487 | 0.046 | 0.425 | 0.0013% |
| chr1_904845_C_A | chr1:904845 | 0.487 | 0.061 | 0.003 | <0.001% |
| chr1_921203_G_T | chr1:921203 | -0.335 | -0.176 | -0.690 | — |
| chr1_870020_C_G | chr1:870020 | 0.480 | 0.225 | 0.497 | 0.0026% |
| chr1_921208_C_A | chr1:921208 | -0.302 | -0.180 | -0.661 | — |
| chr1_904450_C_A | chr1:904450 | 0.163 | 0.096 | 0.725 | <0.001% |
| chr1_921235_G_T | chr1:921235 | -0.359 | -0.180 | -0.649 | — |
| chr1_921206_G_C | chr1:921206 | -0.329 | -0.196 | -0.626 | — |
| chr1_869895_C_A | chr1:869895 | -0.439 | 0.182 | -0.490 | <0.001% |
| chr1_869774_C_A | chr1:869774 | 0.276 | 0.129 | 0.686 | <0.001% |
| chr1_904787_C_A | chr1:904787 | 0.427 | 0.054 | 0.539 | 0.0013% |
| chr1_904429_C_T | chr1:904429 | 0.184 | 0.076 | 0.673 | <0.001% |
| chr1_869777_C_T | chr1:869777 | 0.206 | 0.141 | 0.667 | <0.001% |
| chr1_906997_T_G | chr1:906997 | 0.122 | 0.208 | 0.667 | 0.0013% |
| chr1_921220_T_C | chr1:921220 | -0.231 | -0.139 | -0.596 | — |
| chr1_912976_A_G | chr1:912976 | -0.178 | -0.131 | -0.654 | <0.001% |
| chr1_921172_G_C | chr1:921172 | -0.230 | -0.123 | -0.573 | — |
| chr1_869958_C_G | chr1:869958 | -0.401 | -0.018 | -0.327 | 0.0085% |
| chr1_911378_G_C | chr1:911378 | -0.258 | -0.067 | -0.634 | <0.001% |
| chr1_904695_T_C | chr1:904695 | -0.341 | -0.076 | -0.631 | 0.167% |
| chr1_921209_G_T | chr1:921209 | -0.249 | -0.155 | -0.561 | 0.0013% |
| chr1_904787_C_G | chr1:904787 | 0.393 | 0.012 | 0.330 | <0.001% |
| chr1_921221_C_G | chr1:921221 | 0.315 | 0.209 | 0.550 | — |
| chr1_904817_A_T | chr1:904817 | -0.389 | 0.019 | -0.163 | <0.001% |
| chr1_912977_C_T | chr1:912977 | -0.184 | -0.109 | -0.601 | 0.0013% |
| chr1_921149_G_A | chr1:921149 | 0.244 | 0.054 | 0.601 | <0.001% |
| chr1_904514_G_A | chr1:904514 | 0.378 | 0.137 | 0.176 | <0.001% |
| chr1_904724_C_T | chr1:904724 | 0.347 | 0.106 | 0.588 | <0.001% |
| chr1_906924_A_T | chr1:906924 | -0.100 | -0.123 | -0.588 | <0.001% |
| chr1_869757_C_G | chr1:869757 | 0.174 | 0.131 | 0.575 | <0.001% |
| chr1_921210_G_T | chr1:921210 | -0.225 | -0.157 | -0.515 | — |
| chr1_904744_G_C | chr1:904744 | -0.353 | -0.044 | -0.359 | <0.001% |
| chr1_906797_T_C | chr1:906797 | 0.043 | 0.062 | 0.556 | <0.001% |
| chr1_921196_T_A | chr1:921196 | -0.203 | -0.123 | -0.497 | 0.0020% |
| chr1_921208_C_T | chr1:921208 | -0.236 | -0.118 | -0.497 | 0.0013% |
| chr1_919793_G_T | chr1:919793 | -0.184 | -0.134 | -0.549 | <0.001% |
| chr1_921195_C_A | chr1:921195 | 0.098 | -0.004 | 0.480 | — |
| chr1_869793_C_G | chr1:869793 | 0.167 | 0.107 | 0.529 | 0.0066% |
| chr1_870150_A_G | chr1:870150 | -0.196 | -0.107 | -0.529 | 0.033% |
| chr1_921210_G_C | chr1:921210 | -0.211 | -0.142 | -0.474 | — |
| chr1_921195_C_T | chr1:921195 | -0.207 | -0.121 | -0.468 | — |
| chr1_869933_G_A | chr1:869933 | -0.328 | -0.065 | -0.052 | <0.001% |
| chr1_904451_C_G | chr1:904451 | 0.113 | 0.063 | 0.510 | 0.0020% |
| chr1_904837_G_C | chr1:904837 | 0.215 | 0.071 | 0.510 | 0.0026% |
| chr1_904784_C_T | chr1:904784 | -0.320 | -0.002 | -0.065 | <0.001% |
| chr1_869967_T_C | chr1:869967 | 0.186 | 0.216 | 0.503 | <0.001% |
| chr1_869983_C_A | chr1:869983 | 0.201 | -0.048 | 0.503 | <0.001% |
| chr1_870051_G_A | chr1:870051 | 0.181 | 0.137 | 0.503 | 0.0020% |
| chr1_921233_C_A | chr1:921233 | -0.251 | -0.120 | -0.450 | — |
| chr1_869855_A_G | chr1:869855 | 0.315 | 0.065 | 0.399 | <0.001% |
| chr1_904743_C_T | chr1:904743 | -0.315 | -0.062 | -0.359 | <0.001% |
| chr1_921221_C_A | chr1:921221 | 0.252 | 0.185 | 0.444 | — |
| chr1_904700_G_T | chr1:904700 | -0.312 | -0.016 | -0.052 | 0.150% |
| chr1_904861_G_C | chr1:904861 | 0.308 | -0.001 | 0.150 | <0.001% |
| chr1_921215_C_T | chr1:921215 | -0.152 | -0.091 | -0.433 | — |
| chr1_911333_T_C | chr1:911333 | -0.120 | -0.003 | -0.477 | <0.001% |
| chr1_919799_G_A | chr1:919799 | -0.175 | -0.136 | -0.477 | 0.0013% |
| chr1_904810_C_A | chr1:904810 | 0.298 | 0.032 | 0.196 | <0.001% |
| chr1_912945_T_A | chr1:912945 | 0.110 | 0.112 | 0.464 | 0.0046% |
| chr1_870057_G_T | chr1:870057 | 0.033 | 0.065 | 0.458 | <0.001% |
| chr1_906954_C_T | chr1:906954 | -0.077 | -0.097 | -0.458 | 0.0013% |
| chr1_906969_C_G | chr1:906969 | 0.051 | 0.118 | 0.458 | <0.001% |
| chr1_912877_G_A | chr1:912877 | 0.064 | -0.019 | -0.458 | 0.0020% |
| chr1_921216_A_T | chr1:921216 | -0.193 | -0.106 | -0.409 | <0.001% |
| chr1_912971_C_T | chr1:912971 | -0.129 | -0.085 | -0.451 | 0.0013% |
| chr1_921213_G_T | chr1:921213 | -0.180 | -0.112 | -0.404 | — |
| chr1_904636_C_T | chr1:904636 | 0.108 | 0.014 | 0.444 | 0.0022% |
| chr1_904830_C_T | chr1:904830 | -0.277 | -0.007 | 0.222 | 0.025% |
| chr1_921234_A_C | chr1:921234 | -0.175 | -0.103 | -0.392 | — |
| chr1_904737_C_G | chr1:904737 | -0.275 | -0.025 | -0.118 | 0.0026% |
| chr1_904703_T_C | chr1:904703 | -0.215 | -0.038 | -0.435 | <0.001% |
| chr1_904801_G_A | chr1:904801 | 0.152 | 0.071 | 0.435 | <0.001% |
| chr1_870013_A_G | chr1:870013 | -0.271 | -0.169 | -0.431 | 0.041% |
| chr1_904725_T_C | chr1:904725 | -0.157 | -0.044 | -0.431 | <0.001% |
| chr1_906891_T_A | chr1:906891 | -0.088 | -0.083 | -0.431 | 0.0013% |
| chr1_921236_C_A | chr1:921236 | -0.175 | -0.074 | -0.386 | — |
| chr1_904847_T_C | chr1:904847 | 0.238 | -0.018 | -0.418 | <0.001% |
| chr1_904458_C_T | chr1:904458 | 0.019 | 0.061 | 0.412 | <0.001% |
| chr1_904517_G_A | chr1:904517 | 0.039 | 0.043 | 0.412 | 0.0066% |
| chr1_904837_G_A | chr1:904837 | 0.256 | 0.039 | 0.412 | 0.0026% |
| chr1_921124_C_G | chr1:921124 | 0.260 | 0.166 | 0.261 | <0.001% |
| chr1_870058_G_A | chr1:870058 | 0.013 | 0.077 | 0.405 | 0.0013% |
| chr1_921204_G_C | chr1:921204 | -0.159 | -0.108 | -0.363 | — |
| chr1_921230_G_C | chr1:921230 | -0.150 | -0.052 | -0.363 | — |
| chr1_870067_C_T | chr1:870067 | 0.066 | 0.086 | 0.399 | 0.028% |
| chr1_904425_C_T | chr1:904425 | 0.059 | 0.063 | 0.399 | 0.0020% |
| chr1_870002_C_G | chr1:870002 | -0.249 | 0.035 | -0.346 | <0.001% |
| chr1_904728_G_T | chr1:904728 | 0.199 | 0.063 | 0.392 | 0.0033% |
| chr1_904787_C_T | chr1:904787 | 0.220 | 0.041 | 0.386 | 0.0013% |
| chr1_904804_G_C | chr1:904804 | -0.242 | 0.025 | -0.098 | <0.001% |
| chr1_921190_A_C | chr1:921190 | -0.194 | -0.120 | -0.281 | — |
| chr1_921200_T_C | chr1:921200 | 0.194 | 0.151 | 0.327 | — |
| chr1_911415_A_G | chr1:911415 | 0.240 | 0.019 | 0.163 | 0.013% |
| chr1_869793_C_T | chr1:869793 | 0.144 | 0.083 | 0.379 | <0.001% |
| chr1_904717_C_T | chr1:904717 | 0.063 | 0.067 | 0.379 | <0.001% |
| chr1_921188_T_A | chr1:921188 | -0.140 | -0.159 | -0.339 | — |
| chr1_870022_A_G | chr1:870022 | 0.036 | -0.091 | -0.373 | <0.001% |
| chr1_921191_C_A | chr1:921191 | 0.189 | 0.058 | 0.287 | — |
| chr1_904699_C_A | chr1:904699 | -0.231 | 0.011 | 0.235 | <0.001% |
| chr1_906870_A_G | chr1:906870 | -0.110 | -0.062 | -0.366 | 1.69% |
| chr1_906996_G_A | chr1:906996 | -0.088 | -0.089 | -0.366 | <0.001% |
| chr1_921185_T_C | chr1:921185 | 0.185 | 0.091 | 0.053 | — |
| chr1_921215_C_G | chr1:921215 | -0.156 | -0.063 | -0.327 | — |
| chr1_904859_C_G | chr1:904859 | -0.229 | 0.011 | -0.127 | 0.0039% |
| chr1_921190_A_G | chr1:921190 | -0.183 | -0.152 | -0.275 | — |
| chr1_904422_C_T | chr1:904422 | 0.057 | 0.048 | 0.359 | 0.0013% |
| chr1_904452_C_A | chr1:904452 | 0.013 | 0.068 | 0.359 | <0.001% |
| chr1_904505_C_G | chr1:904505 | 0.132 | 0.018 | 0.359 | <0.001% |
| chr1_904474_C_T | chr1:904474 | -0.225 | -0.002 | -0.242 | 0.0013% |
| chr1_869835_G_C | chr1:869835 | -0.064 | -0.030 | -0.353 | 0.0020% |
| chr1_904121_C_G | chr1:904121 | -0.049 | -0.065 | -0.353 | <0.001% |
| chr1_904478_C_T | chr1:904478 | 0.055 | 0.020 | 0.353 | 0.0014% |
| chr1_906981_C_T | chr1:906981 | -0.005 | -0.034 | -0.353 | <0.001% |
| chr1_921215_C_A | chr1:921215 | -0.148 | -0.052 | -0.316 | — |
| chr1_870119_G_A | chr1:870119 | 0.063 | 0.246 | 0.350 | 0.0020% |
| chr1_869905_G_T | chr1:869905 | 0.103 | 0.038 | 0.346 | 0.0013% |
| chr1_869951_A_G | chr1:869951 | -0.219 | -0.069 | -0.275 | 0.012% |
| chr1_912873_C_G | chr1:912873 | 0.076 | -0.042 | -0.346 | <0.001% |
| chr1_921194_C_T | chr1:921194 | 0.175 | 0.096 | 0.246 | — |
| chr1_870042_C_A | chr1:870042 | 0.080 | 0.021 | 0.340 | <0.001% |
| chr1_919771_C_G | chr1:919771 | 0.196 | 0.133 | 0.340 | 0.0013% |
| chr1_921184_T_A | chr1:921184 | 0.109 | 0.062 | 0.304 | — |
| chr1_921224_G_T | chr1:921224 | -0.119 | -0.047 | -0.304 | — |
| chr1_904516_G_T | chr1:904516 | 0.211 | 0.040 | 0.170 | 0.0010% |
| chr1_904785_C_G | chr1:904785 | 0.210 | 0.042 | 0.150 | <0.001% |
| chr1_870089_G_C | chr1:870089 | 0.208 | 0.113 | 0.157 | <0.001% |
| chr1_870110_G_A | chr1:870110 | 0.141 | -0.002 | 0.330 | 0.0013% |
| chr1_904620_C_T | chr1:904620 | 0.195 | 0.020 | 0.327 | 0.0021% |
| chr1_906999_C_T | chr1:906999 | -0.047 | -0.048 | -0.327 | <0.001% |
| chr1_919792_A_T | chr1:919792 | -0.112 | -0.093 | -0.327 | 0.0053% |
| chr1_921189_G_C | chr1:921189 | -0.094 | -0.101 | -0.292 | — |
| chr1_921212_A_T | chr1:921212 | -0.107 | -0.026 | -0.292 | — |
| chr1_904511_A_T | chr1:904511 | 0.205 | 0.027 | 0.275 | 0.0010% |
| chr1_869931_G_A | chr1:869931 | -0.204 | -0.163 | 0.163 | 0.0020% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.