Home / Gene
PLEKHN1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PLEKHN1
chr1:866,481..1,075,865, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_904707_A_C | chr1:904707 | -40,176 | -1,812 | -25,088 | 2.8e-5 |
| chr1_869922_C_T | chr1:869922 | -36,544 | -4,144 | -32,256 | 2.0e-5 |
| chr1_921194_C_G | chr1:921194 | 30,688 | 4,688 | 22,656 | — |
| chr1_904778_G_C | chr1:904778 | -30,320 | -684 | -29,568 | 6.6e-6 |
| chr1_912972_G_A | chr1:912972 | 29,472 | 7,984 | 41,344 | 6.6e-6 |
| chr1_904694_G_A | chr1:904694 | 28,080 | 2,672 | 14,080 | 2.1e-5 |
| chr1_921196_T_G | chr1:921196 | 26,784 | 5,424 | 20,352 | — |
| chr1_921203_G_A | chr1:921203 | 26,752 | 3,840 | 17,920 | 1.5e-2 |
| chr1_904732_G_A | chr1:904732 | 25,168 | 1,704 | 14,208 | 1.3e-5 |
| chr1_921194_C_A | chr1:921194 | 24,288 | 3,792 | 18,304 | — |
| chr1_912970_C_T | chr1:912970 | 24,128 | 7,072 | 35,968 | 1.3e-5 |
| chr1_921208_C_G | chr1:921208 | -23,904 | -4,688 | -34,688 | — |
| chr1_870017_C_T | chr1:870017 | 22,624 | 3,248 | 17,024 | 6.6e-6 |
| chr1_921235_G_C | chr1:921235 | -22,240 | -3,744 | -25,856 | — |
| chr1_921206_G_A | chr1:921206 | -21,632 | -3,904 | -25,344 | 2.6e-5 |
| chr1_921207_G_T | chr1:921207 | -21,056 | -3,552 | -25,216 | — |
| chr1_904780_G_A | chr1:904780 | -20,864 | -456 | -12,800 | 2.6e-5 |
| chr1_921207_G_A | chr1:921207 | -20,736 | -3,376 | -24,832 | — |
| chr1_921205_C_G | chr1:921205 | -20,672 | -4,144 | -27,264 | 1.3e-5 |
| chr1_921207_G_C | chr1:921207 | -20,448 | -3,488 | -23,552 | — |
| chr1_921199_C_T | chr1:921199 | -20,224 | -3,712 | -27,264 | — |
| chr1_921199_C_G | chr1:921199 | -19,968 | -3,968 | -26,112 | — |
| chr1_921206_G_T | chr1:921206 | -19,840 | -3,968 | -24,704 | 3.3e-5 |
| chr1_921198_C_T | chr1:921198 | -18,176 | -3,728 | -26,112 | 3.3e-5 |
| chr1_921201_C_A | chr1:921201 | -17,792 | -3,648 | -25,728 | — |
| chr1_921200_T_A | chr1:921200 | -17,760 | -3,824 | -23,936 | — |
| chr1_921198_C_A | chr1:921198 | -17,536 | -3,424 | -24,832 | — |
| chr1_921203_G_C | chr1:921203 | -17,536 | -2,864 | -18,048 | — |
| chr1_921202_T_A | chr1:921202 | -17,504 | -3,472 | -23,808 | 6.7e-6 |
| chr1_921201_C_T | chr1:921201 | -17,440 | -3,312 | -23,040 | — |
| chr1_921232_C_G | chr1:921232 | 17,216 | 2,448 | 12,544 | — |
| chr1_870019_C_A | chr1:870019 | 16,928 | 2,992 | 14,976 | 6.6e-6 |
| chr1_913018_G_C | chr1:913018 | 16,864 | 5,152 | 32,384 | 1.3e-5 |
| chr1_921202_T_G | chr1:921202 | -16,768 | -3,392 | -22,528 | — |
| chr1_921198_C_G | chr1:921198 | -16,672 | -3,360 | -23,424 | — |
| chr1_921219_C_G | chr1:921219 | -16,576 | -2,432 | -17,792 | — |
| chr1_921204_G_A | chr1:921204 | -16,384 | -3,456 | -22,272 | — |
| chr1_921205_C_A | chr1:921205 | -16,224 | -3,392 | -21,120 | — |
| chr1_921200_T_G | chr1:921200 | -15,776 | -3,280 | -20,224 | — |
| chr1_921212_A_G | chr1:921212 | -15,392 | -2,976 | -23,808 | — |
| chr1_913005_T_C | chr1:913005 | 15,360 | 3,008 | 24,064 | 1.3e-5 |
| chr1_921193_T_C | chr1:921193 | -15,360 | -2,720 | -22,528 | — |
| chr1_904836_C_T | chr1:904836 | 15,136 | 836 | 9,088 | 1.3e-5 |
| chr1_904808_C_T | chr1:904808 | 15,120 | 464 | 8,320 | 1.3e-5 |
| chr1_904845_C_A | chr1:904845 | 15,104 | 608 | 64 | 6.6e-6 |
| chr1_921201_C_G | chr1:921201 | -15,072 | -3,008 | -20,480 | — |
| chr1_870020_C_G | chr1:870020 | 14,912 | 2,256 | 9,728 | 2.6e-5 |
| chr1_921199_C_A | chr1:921199 | -14,688 | -3,056 | -20,992 | — |
| chr1_921202_T_C | chr1:921202 | -14,048 | -2,992 | -18,560 | 6.7e-6 |
| chr1_921235_G_T | chr1:921235 | -13,888 | -2,288 | -14,208 | — |
| chr1_921197_C_A | chr1:921197 | -13,760 | -3,088 | -24,064 | 6.6e-6 |
| chr1_869895_C_A | chr1:869895 | -13,632 | 1,824 | -9,600 | 6.6e-6 |
| chr1_904787_C_A | chr1:904787 | 13,264 | 544 | 10,560 | 1.3e-5 |
| chr1_921197_C_T | chr1:921197 | -13,088 | -2,720 | -23,552 | — |
| chr1_870113_G_A | chr1:870113 | 12,992 | 6,320 | 17,088 | 6.6e-6 |
| chr1_921203_G_T | chr1:921203 | -12,960 | -2,240 | -15,104 | — |
| chr1_921206_G_C | chr1:921206 | -12,736 | -2,496 | -13,696 | — |
| chr1_869958_C_G | chr1:869958 | -12,448 | -176 | -6,400 | 8.5e-5 |
| chr1_904787_C_G | chr1:904787 | 12,208 | 124 | 6,464 | 6.6e-6 |
| chr1_921221_C_G | chr1:921221 | 12,192 | 2,656 | 12,032 | — |
| chr1_904721_C_T | chr1:904721 | 12,144 | 988 | 15,360 | 6.6e-6 |
| chr1_904817_A_T | chr1:904817 | -12,080 | 188 | -3,200 | 6.6e-6 |
| chr1_921204_G_T | chr1:921204 | -12,000 | -2,416 | -16,000 | — |
| chr1_904514_G_A | chr1:904514 | 11,744 | 1,368 | 3,456 | 1.0e-5 |
| chr1_921208_C_A | chr1:921208 | -11,680 | -2,288 | -14,464 | — |
| chr1_904744_G_C | chr1:904744 | -10,960 | -440 | -7,040 | 6.9e-6 |
| chr1_921196_T_C | chr1:921196 | -10,848 | -2,464 | -16,896 | — |
| chr1_904724_C_T | chr1:904724 | 10,784 | 1,064 | 11,520 | 6.6e-6 |
| chr1_904695_T_C | chr1:904695 | -10,576 | -764 | -12,352 | 1.7e-3 |
| chr1_869776_C_G | chr1:869776 | 10,560 | 1,616 | 17,600 | 6.6e-6 |
| chr1_869933_G_A | chr1:869933 | -10,176 | -656 | -1,024 | 6.6e-6 |
| chr1_904784_C_T | chr1:904784 | -9,936 | -16 | -1,280 | 6.6e-6 |
| chr1_904307_G_A | chr1:904307 | 9,856 | 3,224 | 39,424 | 2.8e-5 |
| chr1_869855_A_G | chr1:869855 | 9,792 | 656 | 7,808 | 6.6e-6 |
| chr1_904743_C_T | chr1:904743 | -9,792 | -616 | -7,040 | 6.6e-6 |
| chr1_921197_C_G | chr1:921197 | -9,760 | -2,288 | -16,256 | — |
| chr1_921221_C_A | chr1:921221 | 9,760 | 2,352 | 9,728 | — |
| chr1_921233_C_A | chr1:921233 | -9,696 | -1,520 | -9,856 | — |
| chr1_904700_G_T | chr1:904700 | -9,696 | -160 | -1,024 | 1.5e-3 |
| chr1_921209_G_T | chr1:921209 | -9,632 | -1,968 | -12,288 | 1.3e-5 |
| chr1_904861_G_C | chr1:904861 | 9,568 | -12 | 2,944 | 6.6e-6 |
| chr1_904810_C_A | chr1:904810 | 9,248 | 324 | 3,840 | 6.6e-6 |
| chr1_870069_C_A | chr1:870069 | 9,184 | 2,672 | 15,488 | 6.6e-6 |
| chr1_921208_C_T | chr1:921208 | -9,120 | -1,504 | -10,880 | 1.3e-5 |
| chr1_921220_T_C | chr1:921220 | -8,928 | -1,760 | -13,056 | — |
| chr1_921172_G_C | chr1:921172 | -8,896 | -1,568 | -12,544 | — |
| chr1_921210_G_T | chr1:921210 | -8,704 | -2,000 | -11,264 | — |
| chr1_904830_C_T | chr1:904830 | -8,592 | -68 | 4,352 | 2.5e-4 |
| chr1_906914_C_T | chr1:906914 | -8,576 | -1,440 | -20,736 | 1.3e-5 |
| chr1_869774_C_A | chr1:869774 | 8,576 | 1,296 | 13,440 | 6.6e-6 |
| chr1_904737_C_G | chr1:904737 | -8,528 | -248 | -2,304 | 2.6e-5 |
| chr1_870013_A_G | chr1:870013 | -8,416 | -1,696 | -8,448 | 4.1e-4 |
| chr1_921210_G_C | chr1:921210 | -8,160 | -1,808 | -10,368 | — |
| chr1_921124_C_G | chr1:921124 | 8,064 | 1,664 | 5,120 | 6.6e-6 |
| chr1_911378_G_C | chr1:911378 | -8,000 | -672 | -12,416 | 6.6e-6 |
| chr1_921195_C_T | chr1:921195 | -8,000 | -1,536 | -10,240 | — |
| chr1_904837_G_A | chr1:904837 | 7,936 | 388 | 8,064 | 2.6e-5 |
| chr1_904301_G_C | chr1:904301 | 7,840 | 3,276 | 40,960 | 6.6e-6 |
| chr1_921196_T_A | chr1:921196 | -7,840 | -1,568 | -10,880 | 2.0e-5 |
| chr1_870002_C_G | chr1:870002 | -7,744 | 352 | -6,784 | 6.6e-6 |
| chr1_904306_G_T | chr1:904306 | 7,648 | 2,936 | 36,480 | 6.8e-6 |
| chr1_921149_G_A | chr1:921149 | 7,584 | 544 | 11,776 | 6.6e-6 |
| chr1_904804_G_C | chr1:904804 | -7,520 | 248 | -1,920 | 6.6e-6 |
| chr1_921190_A_C | chr1:921190 | -7,488 | -1,520 | -6,144 | — |
| chr1_921200_T_C | chr1:921200 | 7,488 | 1,920 | 7,168 | — |
| chr1_921216_A_T | chr1:921216 | -7,456 | -1,344 | -8,960 | 6.6e-6 |
| chr1_911415_A_G | chr1:911415 | 7,456 | 192 | 3,200 | 1.3e-4 |
| chr1_904847_T_C | chr1:904847 | 7,392 | -184 | -8,192 | 6.9e-6 |
| chr1_869777_C_A | chr1:869777 | 7,360 | 1,344 | 16,384 | 6.6e-6 |
| chr1_904299_G_A | chr1:904299 | 7,296 | 3,792 | 42,496 | 1.3e-5 |
| chr1_921191_C_A | chr1:921191 | 7,296 | 736 | 6,272 | — |
| chr1_904699_C_A | chr1:904699 | -7,168 | 108 | 4,608 | 6.9e-6 |
| chr1_921185_T_C | chr1:921185 | 7,168 | 1,152 | 1,152 | — |
| chr1_904859_C_G | chr1:904859 | -7,120 | 108 | -2,496 | 3.9e-5 |
| chr1_921190_A_G | chr1:921190 | -7,072 | -1,936 | -6,016 | — |
| chr1_904474_C_T | chr1:904474 | -6,976 | -24 | -4,736 | 1.3e-5 |
| chr1_921213_G_T | chr1:921213 | -6,944 | -1,424 | -8,832 | — |
| chr1_904787_C_T | chr1:904787 | 6,816 | 408 | 7,552 | 1.3e-5 |
| chr1_921236_C_A | chr1:921236 | -6,784 | -944 | -8,448 | — |
| chr1_869951_A_G | chr1:869951 | -6,784 | -688 | -5,376 | 1.2e-4 |
| chr1_921234_A_C | chr1:921234 | -6,752 | -1,312 | -8,576 | — |
| chr1_921194_C_T | chr1:921194 | 6,752 | 1,216 | 5,376 | — |
| chr1_904837_G_C | chr1:904837 | 6,688 | 716 | 9,984 | 2.6e-5 |
| chr1_904703_T_C | chr1:904703 | -6,672 | -376 | -8,512 | 6.8e-6 |
| chr1_904516_G_T | chr1:904516 | 6,560 | 396 | 3,328 | 1.0e-5 |
| chr1_904785_C_G | chr1:904785 | 6,512 | 416 | 2,944 | 6.6e-6 |
| chr1_870089_G_C | chr1:870089 | 6,464 | 1,136 | 3,072 | 6.6e-6 |
| chr1_869777_C_T | chr1:869777 | 6,400 | 1,408 | 13,056 | 6.6e-6 |
| chr1_904511_A_T | chr1:904511 | 6,352 | 272 | 5,376 | 1.0e-5 |
| chr1_869931_G_A | chr1:869931 | -6,336 | -1,632 | 3,200 | 2.0e-5 |
| chr1_869983_C_A | chr1:869983 | 6,240 | -480 | 9,856 | 6.6e-6 |
| chr1_904728_G_T | chr1:904728 | 6,192 | 636 | 7,680 | 3.3e-5 |
| chr1_921204_G_C | chr1:921204 | -6,144 | -1,376 | -7,936 | — |
| chr1_870150_A_G | chr1:870150 | -6,080 | -1,072 | -10,368 | 3.3e-4 |
| chr1_919771_C_G | chr1:919771 | 6,080 | 1,328 | 6,656 | 1.3e-5 |
| chr1_921215_C_G | chr1:921215 | -6,048 | -800 | -7,168 | — |
| chr1_904620_C_T | chr1:904620 | 6,048 | 204 | 6,400 | 2.1e-5 |
| chr1_921215_C_T | chr1:921215 | -5,888 | -1,152 | -9,472 | — |
| chr1_921230_G_C | chr1:921230 | -5,792 | -656 | -7,936 | — |
| chr1_869967_T_C | chr1:869967 | 5,760 | 2,160 | 9,856 | 6.6e-6 |
| chr1_921215_C_A | chr1:921215 | -5,728 | -656 | -6,912 | — |
| chr1_904429_C_T | chr1:904429 | 5,696 | 764 | 13,184 | 6.6e-6 |
| chr1_912977_C_T | chr1:912977 | -5,696 | -1,088 | -11,776 | 1.3e-5 |
| chr1_919793_G_T | chr1:919793 | -5,696 | -1,344 | -10,752 | 6.6e-6 |
| chr1_870051_G_A | chr1:870051 | 5,632 | 1,376 | 9,856 | 2.0e-5 |
| chr1_912976_A_G | chr1:912976 | -5,536 | -1,312 | -12,800 | 6.6e-6 |
| chr1_919799_G_A | chr1:919799 | -5,440 | -1,360 | -9,344 | 1.3e-5 |
| chr1_869757_C_G | chr1:869757 | 5,408 | 1,312 | 11,264 | 6.6e-6 |
| chr1_921188_T_A | chr1:921188 | -5,408 | -2,016 | -7,424 | — |
| chr1_869793_C_G | chr1:869793 | 5,184 | 1,072 | 10,368 | 6.6e-5 |
| chr1_904450_C_A | chr1:904450 | 5,056 | 960 | 14,208 | 6.6e-6 |
| chr1_904725_T_C | chr1:904725 | -4,864 | -436 | -8,448 | 6.6e-6 |
| chr1_904801_G_A | chr1:904801 | 4,720 | 712 | 8,512 | 6.6e-6 |
| chr1_906982_C_T | chr1:906982 | -4,656 | -432 | -15,360 | 2.3e-1 |
| chr1_921224_G_T | chr1:921224 | -4,608 | -592 | -6,656 | — |
| chr1_913039_G_T | chr1:913039 | -4,576 | -2,144 | -15,616 | 6.6e-6 |
| chr1_869793_C_T | chr1:869793 | 4,480 | 832 | 7,424 | 6.6e-6 |
| chr1_913034_G_A | chr1:913034 | -4,448 | -2,000 | -15,232 | 6.6e-6 |
| chr1_870110_G_A | chr1:870110 | 4,384 | -16 | 6,464 | 1.3e-5 |
| chr1_921184_T_A | chr1:921184 | 4,224 | 784 | 6,656 | — |
| chr1_921212_A_T | chr1:921212 | -4,128 | -336 | -6,400 | — |
| chr1_904505_C_G | chr1:904505 | 4,096 | 176 | 7,040 | 9.8e-6 |
| chr1_904309_G_C | chr1:904309 | 4,032 | 1,384 | 19,840 | 7.2e-6 |
| chr1_906992_A_G | chr1:906992 | 4,016 | 3,136 | 26,880 | 1.3e-5 |
| chr1_912971_C_T | chr1:912971 | -4,000 | -848 | -8,832 | 1.3e-5 |
| chr1_906997_T_G | chr1:906997 | 3,776 | 2,080 | 13,056 | 1.3e-5 |
| chr1_921195_C_A | chr1:921195 | 3,776 | -48 | 10,496 | — |
| chr1_911333_T_C | chr1:911333 | -3,712 | -32 | -9,344 | 6.6e-6 |
| chr1_921189_G_C | chr1:921189 | -3,648 | -1,280 | -6,400 | — |
| chr1_904451_C_G | chr1:904451 | 3,504 | 632 | 9,984 | 2.0e-5 |
| chr1_919792_A_T | chr1:919792 | -3,488 | -928 | -6,400 | 5.3e-5 |
| chr1_912945_T_A | chr1:912945 | 3,424 | 1,120 | 9,088 | 4.6e-5 |
| chr1_906870_A_G | chr1:906870 | -3,424 | -624 | -7,168 | 1.7e-2 |
| chr1_904636_C_T | chr1:904636 | 3,360 | 144 | 8,704 | 2.2e-5 |
| chr1_869905_G_T | chr1:869905 | 3,200 | 384 | 6,784 | 1.3e-5 |
| chr1_906924_A_T | chr1:906924 | -3,104 | -1,232 | -11,520 | 6.6e-6 |
| chr1_906891_T_A | chr1:906891 | -2,720 | -832 | -8,448 | 1.3e-5 |
| chr1_906996_G_A | chr1:906996 | -2,720 | -896 | -7,168 | 6.6e-6 |
| chr1_870042_C_A | chr1:870042 | 2,496 | 208 | 6,656 | 6.6e-6 |
| chr1_906954_C_T | chr1:906954 | -2,384 | -976 | -8,960 | 1.3e-5 |
| chr1_912873_C_G | chr1:912873 | 2,368 | -416 | -6,784 | 6.6e-6 |
| chr1_870067_C_T | chr1:870067 | 2,048 | 864 | 7,808 | 2.8e-4 |
| chr1_912877_G_A | chr1:912877 | 1,984 | -192 | -8,960 | 2.0e-5 |
| chr1_869835_G_C | chr1:869835 | -1,984 | -304 | -6,912 | 2.0e-5 |
| chr1_904717_C_T | chr1:904717 | 1,952 | 672 | 7,424 | 6.7e-6 |
| chr1_870119_G_A | chr1:870119 | 1,952 | 2,464 | 6,848 | 2.0e-5 |
| chr1_904425_C_T | chr1:904425 | 1,840 | 628 | 7,808 | 2.0e-5 |
| chr1_904422_C_T | chr1:904422 | 1,760 | 480 | 7,040 | 1.3e-5 |
| chr1_904478_C_T | chr1:904478 | 1,696 | 204 | 6,912 | 1.4e-5 |
| chr1_906969_C_G | chr1:906969 | 1,584 | 1,184 | 8,960 | 6.6e-6 |
| chr1_904121_C_G | chr1:904121 | -1,520 | -656 | -6,912 | 6.6e-6 |
| chr1_906999_C_T | chr1:906999 | -1,472 | -480 | -6,400 | 6.6e-6 |
| chr1_906797_T_C | chr1:906797 | 1,344 | 624 | 10,880 | 6.6e-6 |
| chr1_904517_G_A | chr1:904517 | 1,216 | 428 | 8,064 | 6.6e-5 |
| chr1_870022_A_G | chr1:870022 | 1,120 | -912 | -7,296 | 6.6e-6 |
| chr1_870057_G_T | chr1:870057 | 1,024 | 656 | 8,960 | 6.6e-6 |
| chr1_904458_C_T | chr1:904458 | 592 | 608 | 8,064 | 6.6e-6 |
| chr1_870058_G_A | chr1:870058 | 416 | 768 | 7,936 | 1.3e-5 |
| chr1_904452_C_A | chr1:904452 | 416 | 684 | 7,040 | 6.6e-6 |
| chr1_906981_C_T | chr1:906981 | -144 | -336 | -6,912 | 6.6e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.