PRDM16

Scored variants near PRDM16

chr1:2,969,202..3,538,621, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr1_3066348_G_A	chr1:3066348	-1.000	-0.847	-1.000	0.0039%
chr1_3066352_G_A	chr1:3066352	-1.000	-0.824	-1.000	0.0013%
chr1_3066347_C_A	chr1:3066347	1.000	0.518	0.680	0.0013%
chr1_3012662_C_T	chr1:3012662	-0.549	-0.329	-1.000	<0.001%
chr1_3066345_C_T	chr1:3066345	-0.920	-0.530	-1.000	0.0046%
chr1_3012607_C_T	chr1:3012607	0.454	0.335	1.000	0.047%
chr1_3066340_G_A	chr1:3066340	-0.685	-0.447	-0.810	<0.001%
chr1_3031440_C_G	chr1:3031440	0.310	0.214	1.000	0.0013%
chr1_3012608_C_G	chr1:3012608	0.371	0.290	1.000	<0.001%
chr1_3070090_A_C	chr1:3070090	-0.068	-0.263	-0.973	<0.001%
chr1_3012599_C_T	chr1:3012599	0.329	0.256	0.944	<0.001%
chr1_3012650_G_C	chr1:3012650	-0.312	-0.201	-0.892	<0.001%
chr1_3066584_G_A	chr1:3066584	0.539	0.553	0.588	0.0013%
chr1_3070219_C_T	chr1:3070219	-0.240	-0.145	-0.850	0.0013%
chr1_3069869_G_A	chr1:3069869	0.019	0.184	0.817	0.0092%
chr1_3069778_C_T	chr1:3069778	-0.515	-0.049	-0.289	<0.001%
chr1_3012613_C_T	chr1:3012613	0.295	0.248	0.807	<0.001%
chr1_3069878_G_A	chr1:3069878	0.000	0.157	0.804	<0.001%
chr1_3061140_A_T	chr1:3061140	-0.305	-0.246	-0.765	<0.001%
chr1_3069897_A_G	chr1:3069897	-0.064	-0.201	-0.752	<0.001%
chr1_3069883_G_A	chr1:3069883	0.008	0.168	0.745	0.0020%
chr1_3012605_C_T	chr1:3012605	0.306	0.186	0.725	<0.001%
chr1_3070101_C_T	chr1:3070101	0.045	0.191	0.708	<0.001%
chr1_3061109_G_A	chr1:3061109	0.241	0.048	0.641	0.011%
chr1_3069886_G_A	chr1:3069886	0.006	0.139	0.627	<0.001%
chr1_3031182_G_C	chr1:3031182	0.193	0.177	0.608	0.014%
chr1_3069862_G_A	chr1:3069862	0.019	0.145	0.608	0.0013%
chr1_3070123_G_A	chr1:3070123	0.048	0.158	0.586	0.016%
chr1_3069889_G_A	chr1:3069889	-0.012	0.150	0.582	<0.001%
chr1_3069901_G_A	chr1:3069901	-0.033	0.142	0.569	<0.001%
chr1_3070085_C_A	chr1:3070085	0.037	0.159	0.558	<0.001%
chr1_3012609_C_A	chr1:3012609	0.209	0.130	0.549	0.0013%
chr1_3069647_A_C	chr1:3069647	-0.157	-0.111	-0.546	<0.001%
chr1_3012685_C_T	chr1:3012685	-0.253	-0.123	-0.546	0.018%
chr1_3070048_G_A	chr1:3070048	0.010	0.151	0.545	0.0085%
chr1_3070292_G_T	chr1:3070292	0.101	0.104	0.543	<0.001%
chr1_3061139_C_A	chr1:3061139	-0.210	-0.102	-0.542	<0.001%
chr1_3070111_G_A	chr1:3070111	0.030	0.158	0.542	0.0013%
chr1_3061159_A_T	chr1:3061159	0.336	0.157	0.346	0.0033%
chr1_3012614_C_T	chr1:3012614	0.215	0.139	0.516	0.067%
chr1_3069909_G_A	chr1:3069909	0.023	0.109	0.516	0.0013%
chr1_3012668_A_G	chr1:3012668	-0.225	-0.130	-0.510	<0.001%
chr1_3070120_C_A	chr1:3070120	0.010	0.141	0.503	0.0013%
chr1_3069900_G_A	chr1:3069900	0.010	0.123	0.497	<0.001%
chr1_3070122_C_T	chr1:3070122	0.034	0.115	0.488	0.0013%
chr1_3012623_C_A	chr1:3012623	0.197	0.135	0.487	<0.001%
chr1_3070110_C_T	chr1:3070110	0.010	0.121	0.478	0.0013%
chr1_3069979_A_C	chr1:3069979	0.023	0.115	0.477	0.0013%
chr1_3012609_C_G	chr1:3012609	0.163	0.116	0.474	0.035%
chr1_3012687_C_G	chr1:3012687	0.167	0.064	0.471	<0.001%
chr1_3031670_G_A	chr1:3031670	0.009	0.104	0.471	0.0026%
chr1_3070116_C_T	chr1:3070116	0.004	0.105	0.465	0.0013%
chr1_3066328_G_A	chr1:3066328	0.289	0.192	0.255	0.0033%
chr1_3069865_C_T	chr1:3069865	-0.002	0.106	0.458	0.022%
chr1_3069905_C_T	chr1:3069905	0.031	0.137	0.458	<0.001%
chr1_3070287_G_A	chr1:3070287	0.128	0.110	0.451	<0.001%
chr1_3069830_C_T	chr1:3069830	0.273	0.153	0.448	<0.001%
chr1_3070050_C_T	chr1:3070050	0.027	0.109	0.446	0.0046%
chr1_3031238_A_G	chr1:3031238	-0.008	-0.053	-0.444	0.0013%
chr1_3069840_G_A	chr1:3069840	0.031	0.106	0.444	0.0020%
chr1_3070099_C_A	chr1:3070099	0.009	0.112	0.444	<0.001%
chr1_3069844_G_A	chr1:3069844	0.046	0.111	0.441	<0.001%
chr1_3066347_C_T	chr1:3066347	0.272	0.141	0.301	0.0033%
chr1_3069837_G_A	chr1:3069837	0.020	0.105	0.431	<0.001%
chr1_3069899_G_T	chr1:3069899	0.021	0.134	0.431	0.0013%
chr1_3012597_C_T	chr1:3012597	0.084	0.094	0.428	0.0059%
chr1_3070317_G_T	chr1:3070317	0.114	0.079	0.426	<0.001%
chr1_3070076_G_A	chr1:3070076	0.013	0.088	0.422	<0.001%
chr1_3070100_C_T	chr1:3070100	0.030	0.146	0.418	0.0013%
chr1_3070118_G_A	chr1:3070118	0.006	0.112	0.405	<0.001%
chr1_3070085_C_T	chr1:3070085	-0.012	0.139	0.403	<0.001%
chr1_3070043_G_A	chr1:3070043	0.039	0.088	0.401	<0.001%
chr1_3069919_C_A	chr1:3069919	0.006	0.089	0.399	0.0020%
chr1_3012635_G_A	chr1:3012635	-0.143	-0.105	-0.395	0.237%
chr1_3070285_G_A	chr1:3070285	0.048	0.107	0.395	<0.001%
chr1_3070143_G_A	chr1:3070143	0.006	0.102	0.394	<0.001%
chr1_3070130_C_T	chr1:3070130	0.016	0.110	0.387	0.0013%
chr1_3012805_G_T	chr1:3012805	-0.004	-0.052	-0.386	<0.001%
chr1_3070282_G_A	chr1:3070282	0.038	0.089	0.383	0.0013%
chr1_3070046_C_T	chr1:3070046	0.014	0.126	0.382	0.0046%
chr1_3066399_T_C	chr1:3066399	-0.239	-0.294	-0.170	0.0013%
chr1_3070205_C_G	chr1:3070205	-0.112	-0.071	-0.373	0.0013%
chr1_3069618_G_A	chr1:3069618	0.163	0.109	0.371	0.0020%
chr1_3012602_C_T	chr1:3012602	0.114	0.115	0.366	0.0026%
chr1_3012695_C_G	chr1:3012695	-0.122	-0.058	-0.359	0.0020%
chr1_3070139_A_G	chr1:3070139	-0.030	-0.068	-0.358	<0.001%
chr1_3069619_G_C	chr1:3069619	0.105	0.082	0.356	0.0099%
chr1_3066320_T_C	chr1:3066320	-0.223	-0.233	-0.314	<0.001%
chr1_3070028_G_A	chr1:3070028	0.010	0.101	0.350	0.024%
chr1_3031661_G_C	chr1:3031661	0.157	0.104	0.346	<0.001%
chr1_3070299_C_A	chr1:3070299	0.040	0.069	0.344	2.50%
chr1_3070251_C_T	chr1:3070251	0.055	0.092	0.343	<0.001%
chr1_3031207_T_A	chr1:3031207	0.111	-0.005	0.340	0.757%
chr1_3070056_G_T	chr1:3070056	0.010	0.090	0.334	<0.001%
chr1_3070050_C_G	chr1:3070050	-0.002	0.066	0.328	<0.001%
chr1_3070055_C_T	chr1:3070055	-0.029	0.103	0.324	0.0046%
chr1_3012701_C_G	chr1:3012701	0.025	0.038	0.317	0.0033%
chr1_3070034_A_C	chr1:3070034	-0.012	-0.083	-0.315	<0.001%
chr1_3070073_G_C	chr1:3070073	-0.031	-0.083	-0.311	<0.001%
chr1_3066313_C_T	chr1:3066313	-0.196	-0.112	-0.216	0.0026%
chr1_3031182_G_A	chr1:3031182	0.068	0.032	0.307	0.0033%
chr1_3070293_G_A	chr1:3070293	0.043	0.065	0.305	<0.001%
chr1_3012822_A_C	chr1:3012822	0.060	0.058	0.304	0.0013%
chr1_3070065_T_C	chr1:3070065	0.040	-0.087	-0.304	0.0020%
chr1_3069851_G_C	chr1:3069851	0.080	-0.054	-0.301	<0.001%
chr1_3066396_G_A	chr1:3066396	0.173	0.585	0.242	<0.001%
chr1_3012767_A_G	chr1:3012767	0.112	0.038	0.297	<0.001%
chr1_3070184_C_T	chr1:3070184	0.048	0.060	0.292	0.0013%
chr1_3070168_C_A	chr1:3070168	-0.023	0.057	0.292	0.0033%
chr1_3066424_C_T	chr1:3066424	-0.184	-0.144	-0.235	0.017%
chr1_3070051_G_A	chr1:3070051	0.047	0.059	0.289	0.0013%
chr1_3069835_C_T	chr1:3069835	-0.034	0.076	0.288	0.0020%
chr1_3069619_G_A	chr1:3069619	0.059	0.069	0.284	0.012%
chr1_3031268_G_A	chr1:3031268	0.090	-0.046	0.281	<0.001%
chr1_3085781_G_T	chr1:3085781	0.122	0.147	0.281	<0.001%
chr1_3070112_C_T	chr1:3070112	-0.007	0.067	0.280	0.0046%
chr1_3061065_C_T	chr1:3061065	-0.174	-0.166	-0.098	<0.001%
chr1_3070113_C_T	chr1:3070113	-0.006	0.063	0.276	<0.001%
chr1_3031649_C_T	chr1:3031649	-0.033	-0.024	-0.275	<0.001%
chr1_3069924_G_A	chr1:3069924	0.023	0.077	0.275	<0.001%
chr1_3012625_C_T	chr1:3012625	0.100	0.065	0.271	<0.001%
chr1_3069809_C_T	chr1:3069809	0.003	0.084	0.270	0.0020%
chr1_3070370_G_T	chr1:3070370	0.089	0.057	0.269	<0.001%
chr1_3070083_C_G	chr1:3070083	0.003	-0.050	-0.267	<0.001%
chr1_3070238_G_C	chr1:3070238	0.093	0.065	0.265	<0.001%
chr1_3061061_C_T	chr1:3061061	0.165	0.067	0.137	0.0020%
chr1_3061189_C_A	chr1:3061189	-0.107	-0.070	-0.261	<0.001%
chr1_3066401_G_A	chr1:3066401	-0.165	-0.153	-0.111	<0.001%
chr1_3070349_C_T	chr1:3070349	0.044	0.046	0.259	<0.001%
chr1_3012603_C_A	chr1:3012603	0.080	0.072	0.252	0.0013%
chr1_3066388_G_C	chr1:3066388	-0.157	-0.163	-0.118	0.0013%
chr1_3066468_T_G	chr1:3066468	-0.157	-0.153	-0.118	0.037%
chr1_3069921_G_A	chr1:3069921	0.006	0.050	0.248	0.0046%
chr1_3069759_G_C	chr1:3069759	0.155	0.008	0.167	<0.001%
chr1_3061059_G_A	chr1:3061059	-0.155	-0.161	0.026	0.0013%
chr1_3070330_C_T	chr1:3070330	-0.014	0.040	0.243	0.0087%
chr1_3012686_C_T	chr1:3012686	0.103	0.039	0.242	0.0013%
chr1_3070374_C_T	chr1:3070374	0.041	0.048	0.242	<0.001%
chr1_3066305_C_T	chr1:3066305	0.151	0.112	0.170	<0.001%
chr1_3066467_G_A	chr1:3066467	-0.151	-0.045	-0.157	0.0033%
chr1_3086046_C_T	chr1:3086046	0.151	0.168	0.157	30.5%
chr1_3012592_C_T	chr1:3012592	0.080	0.061	0.235	<0.001%
chr1_3012765_G_T	chr1:3012765	0.130	0.050	0.235	0.0013%
chr1_3069789_C_A	chr1:3069789	-0.148	-0.010	-0.074	<0.001%
chr1_3069816_A_G	chr1:3069816	0.020	-0.048	-0.235	0.076%
chr1_3070164_C_T	chr1:3070164	0.012	0.061	0.233	<0.001%
chr1_3070330_C_A	chr1:3070330	-0.004	0.040	0.228	0.0013%
chr1_3070241_C_T	chr1:3070241	0.018	0.059	0.227	0.0066%
chr1_3070066_C_T	chr1:3070066	-0.039	0.046	0.226	0.0013%
chr1_3012831_C_T	chr1:3012831	0.035	0.054	0.225	0.0092%
chr1_3069610_G_C	chr1:3069610	0.090	0.041	0.222	0.025%
chr1_3061168_A_C	chr1:3061168	0.089	0.032	0.222	<0.001%
chr1_3066475_C_G	chr1:3066475	0.140	0.141	0.092	<0.001%
chr1_3066654_A_T	chr1:3066654	-0.072	-0.093	-0.222	<0.001%
chr1_3069896_C_G	chr1:3069896	0.031	0.006	0.222	<0.001%
chr1_3070189_C_T	chr1:3070189	0.023	0.044	0.221	0.0026%
chr1_3070031_G_T	chr1:3070031	0.039	0.095	0.221	<0.001%
chr1_3070144_C_T	chr1:3070144	0.024	0.048	0.220	<0.001%
chr1_3070136_T_C	chr1:3070136	0.008	-0.051	-0.218	<0.001%
chr1_3070347_C_A	chr1:3070347	0.046	0.038	0.218	<0.001%
chr1_3070013_G_A	chr1:3070013	-0.006	0.050	0.217	<0.001%
chr1_3070278_C_T	chr1:3070278	0.034	0.049	0.217	<0.001%
chr1_3061199_G_A	chr1:3061199	-0.101	-0.061	-0.216	0.0020%
chr1_3070256_G_A	chr1:3070256	-0.026	0.063	0.211	0.0013%
chr1_3012684_G_A	chr1:3012684	-0.106	-0.039	-0.203	0.0053%
chr1_3012867_C_T	chr1:3012867	0.118	0.052	0.203	0.0013%
chr1_3031271_C_A	chr1:3031271	-0.030	-0.064	-0.203	0.0013%
chr1_3069791_C_A	chr1:3069791	-0.127	0.015	-0.052	<0.001%
chr1_3012674_T_C	chr1:3012674	-0.118	-0.051	-0.199	0.0020%
chr1_3070359_C_T	chr1:3070359	0.058	0.032	0.197	0.0014%
chr1_3066540_A_T	chr1:3066540	0.124	0.147	0.105	0.0020%
chr1_3066613_C_A	chr1:3066613	0.124	0.153	0.170	<0.001%
chr1_3070355_G_A	chr1:3070355	0.028	0.034	0.196	<0.001%
chr1_3061066_C_T	chr1:3061066	-0.123	-0.128	-0.072	<0.001%
chr1_3012648_G_C	chr1:3012648	-0.075	-0.038	-0.193	<0.001%
chr1_3012868_C_T	chr1:3012868	0.091	0.051	0.193	<0.001%
chr1_3061030_G_T	chr1:3061030	0.122	0.121	-0.065	<0.001%
chr1_3066299_G_A	chr1:3066299	-0.122	-0.058	-0.150	2.14%
chr1_3012780_G_C	chr1:3012780	0.121	0.057	-0.046	<0.001%
chr1_3012831_C_A	chr1:3012831	0.058	0.086	0.190	<0.001%
chr1_3066456_G_A	chr1:3066456	-0.120	-0.105	-0.157	<0.001%
chr1_3066610_T_C	chr1:3066610	-0.120	-0.089	-0.144	<0.001%
chr1_3070314_C_T	chr1:3070314	0.001	0.038	0.190	0.0027%
chr1_3070014_C_A	chr1:3070014	-0.010	0.046	0.186	<0.001%
chr1_3070149_C_T	chr1:3070149	0.014	0.052	0.185	0.0020%
chr1_3066285_C_T	chr1:3066285	-0.091	-0.077	-0.183	<0.001%
chr1_3070073_G_T	chr1:3070073	-0.021	0.028	0.183	0.0039%
chr1_3069620_G_T	chr1:3069620	0.016	0.055	0.182	0.0013%
chr1_3012669_G_A	chr1:3012669	-0.080	-0.032	-0.180	<0.001%
chr1_3066324_C_T	chr1:3066324	0.113	-0.003	0.020	0.0039%
chr1_3070059_A_T	chr1:3070059	-0.025	-0.028	-0.177	0.214%
chr1_3070075_G_A	chr1:3070075	0.039	0.035	0.177	0.0079%
chr1_3012789_G_C	chr1:3012789	-0.111	-0.064	-0.075	0.0013%
chr1_3066299_G_C	chr1:3066299	-0.093	-0.054	-0.176	<0.001%
chr1_3066425_G_A	chr1:3066425	-0.111	-0.070	-0.137	0.0013%
chr1_3066482_G_A	chr1:3066482	0.111	0.038	-0.170	<0.001%
chr1_3066369_C_T	chr1:3066369	0.109	0.000	0.000	<0.001%
chr1_3070259_C_A	chr1:3070259	0.038	0.033	0.173	0.110%
chr1_3070346_G_A	chr1:3070346	0.021	0.031	0.172	<0.001%
chr1_3066307_T_C	chr1:3066307	-0.107	0.000	-0.059	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.