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PRPF4
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PRPF4
chr9:113,175,657..113,392,905, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr9_113221418_C_T | chr9:113221418 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr9_113221456_G_C | chr9:113221456 | 1.000 | 0.719 | 0.340 | — |
| chr9_113221405_G_A | chr9:113221405 | 1.000 | 0.907 | 1.000 | — |
| chr9_113221405_G_T | chr9:113221405 | 1.000 | 0.725 | 0.941 | — |
| chr9_113221408_G_A | chr9:113221408 | 0.882 | 0.441 | 0.719 | — |
| chr9_113221411_G_T | chr9:113221411 | 0.819 | 0.559 | 0.758 | — |
| chr9_113221540_C_G | chr9:113221540 | -0.569 | -0.588 | -1.000 | — |
| chr9_113221541_G_C | chr9:113221541 | -0.130 | 0.981 | 1.000 | — |
| chr9_113221455_C_G | chr9:113221455 | 0.658 | 0.332 | -0.105 | — |
| chr9_113221532_G_T | chr9:113221532 | 0.111 | 0.719 | 1.000 | — |
| chr9_113221405_G_C | chr9:113221405 | 0.645 | 0.316 | 0.784 | — |
| chr9_113221533_G_T | chr9:113221533 | 0.223 | 0.687 | 1.000 | — |
| chr9_113221539_G_A | chr9:113221539 | 0.142 | 0.856 | 1.000 | — |
| chr9_113221408_G_C | chr9:113221408 | 0.614 | 0.326 | 0.614 | — |
| chr9_113221541_G_T | chr9:113221541 | 0.297 | 0.652 | 0.954 | — |
| chr9_113221404_A_C | chr9:113221404 | 0.596 | 0.278 | 0.484 | — |
| chr9_113221531_G_A | chr9:113221531 | 0.202 | 0.738 | 0.941 | — |
| chr9_113221404_A_T | chr9:113221404 | 0.588 | 0.310 | 0.510 | — |
| chr9_113221534_A_G | chr9:113221534 | -0.353 | -0.367 | -0.928 | — |
| chr9_113221406_G_T | chr9:113221406 | 0.584 | 0.300 | 0.549 | — |
| chr9_113221541_G_A | chr9:113221541 | 0.016 | 0.904 | 0.915 | — |
| chr9_113221443_A_T | chr9:113221443 | -0.297 | 0.121 | 0.902 | — |
| chr9_113221532_G_C | chr9:113221532 | -0.012 | 0.700 | 0.902 | — |
| chr9_113221533_G_C | chr9:113221533 | 0.039 | 0.591 | 0.902 | — |
| chr9_113221406_G_C | chr9:113221406 | 0.553 | 0.128 | 0.458 | — |
| chr9_113221533_G_A | chr9:113221533 | 0.066 | 0.719 | 0.876 | — |
| chr9_113221531_G_C | chr9:113221531 | 0.229 | 0.700 | 0.863 | <0.001% |
| chr9_113221425_G_T | chr9:113221425 | -0.515 | -0.054 | -0.379 | — |
| chr9_113221538_G_T | chr9:113221538 | 0.200 | 0.588 | 0.810 | — |
| chr9_113221539_G_T | chr9:113221539 | 0.216 | 0.565 | 0.810 | — |
| chr9_113221539_G_C | chr9:113221539 | 0.272 | 0.649 | 0.797 | — |
| chr9_113221528_G_T | chr9:113221528 | 0.241 | 0.645 | 0.771 | — |
| chr9_113221529_G_C | chr9:113221529 | 0.235 | 0.556 | 0.771 | — |
| chr9_113221529_G_T | chr9:113221529 | 0.177 | 0.585 | 0.771 | — |
| chr9_113221409_G_A | chr9:113221409 | 0.400 | 0.093 | 0.758 | — |
| chr9_113221528_G_C | chr9:113221528 | 0.210 | 0.636 | 0.758 | — |
| chr9_113221457_T_G | chr9:113221457 | -0.363 | -0.096 | -0.732 | — |
| chr9_113221532_G_A | chr9:113221532 | -0.072 | 0.668 | 0.732 | — |
| chr9_113275692_C_T | chr9:113275692 | 0.045 | 0.067 | -0.732 | <0.001% |
| chr9_113275578_C_G | chr9:113275578 | -0.115 | 0.013 | 0.719 | — |
| chr9_113221527_G_T | chr9:113221527 | 0.200 | 0.684 | 0.706 | — |
| chr9_113221531_G_T | chr9:113221531 | 0.072 | 0.572 | 0.706 | — |
| chr9_113221528_G_A | chr9:113221528 | 0.243 | 0.613 | 0.693 | — |
| chr9_113221529_G_A | chr9:113221529 | 0.175 | 0.514 | 0.693 | — |
| chr9_113275578_C_A | chr9:113275578 | -0.056 | -0.070 | 0.693 | — |
| chr9_113221426_A_T | chr9:113221426 | -0.429 | -0.038 | -0.209 | — |
| chr9_113221527_G_A | chr9:113221527 | 0.311 | 0.578 | 0.680 | — |
| chr9_113221534_A_T | chr9:113221534 | -0.225 | -0.383 | -0.680 | — |
| chr9_113221433_C_T | chr9:113221433 | 0.113 | 0.192 | 0.667 | — |
| chr9_113221538_G_A | chr9:113221538 | 0.064 | 0.633 | 0.667 | <0.001% |
| chr9_113221438_G_T | chr9:113221438 | -0.408 | 0.147 | 0.105 | — |
| chr9_113221537_G_A | chr9:113221537 | 0.196 | 0.738 | 0.641 | — |
| chr9_113275646_C_T | chr9:113275646 | -0.227 | -0.073 | -0.641 | — |
| chr9_113275678_G_A | chr9:113275678 | -0.058 | -0.051 | 0.641 | — |
| chr9_113221410_G_A | chr9:113221410 | -0.396 | -0.217 | -0.275 | — |
| chr9_113221453_G_T | chr9:113221453 | 0.396 | 0.284 | 0.222 | — |
| chr9_113221527_G_C | chr9:113221527 | 0.249 | 0.655 | 0.627 | — |
| chr9_113275645_T_C | chr9:113275645 | -0.229 | -0.070 | -0.601 | — |
| chr9_113221415_A_C | chr9:113221415 | -0.375 | -0.105 | -0.209 | — |
| chr9_113221439_C_A | chr9:113221439 | -0.297 | -0.093 | -0.588 | — |
| chr9_113221453_G_A | chr9:113221453 | 0.357 | 0.121 | -0.235 | — |
| chr9_113221429_C_G | chr9:113221429 | 0.089 | 0.083 | 0.562 | — |
| chr9_113221456_G_T | chr9:113221456 | 0.247 | -0.067 | -0.562 | — |
| chr9_113275681_C_T | chr9:113275681 | -0.070 | -0.042 | 0.562 | 0.225% |
| chr9_113275629_T_A | chr9:113275629 | -0.346 | -0.093 | -0.105 | <0.001% |
| chr9_113275646_C_A | chr9:113275646 | -0.194 | -0.035 | -0.549 | — |
| chr9_113221434_G_C | chr9:113221434 | 0.336 | 0.080 | 0.052 | <0.001% |
| chr9_113221540_C_A | chr9:113221540 | 0.336 | 0.304 | 0.510 | — |
| chr9_113275558_G_C | chr9:113275558 | -0.330 | -0.016 | -0.327 | — |
| chr9_113275647_C_T | chr9:113275647 | -0.153 | -0.061 | -0.523 | — |
| chr9_113275514_C_A | chr9:113275514 | 0.324 | 0.118 | 0.000 | — |
| chr9_113221407_T_C | chr9:113221407 | -0.322 | -0.281 | -0.353 | — |
| chr9_113275527_T_G | chr9:113275527 | -0.322 | -0.134 | -0.039 | — |
| chr9_113221413_A_G | chr9:113221413 | -0.315 | -0.224 | -0.118 | — |
| chr9_113221406_G_A | chr9:113221406 | 0.311 | 0.118 | 0.314 | — |
| chr9_113275604_G_T | chr9:113275604 | 0.309 | 0.527 | 0.235 | <0.001% |
| chr9_113221426_A_G | chr9:113221426 | -0.307 | -0.070 | 0.183 | — |
| chr9_113221413_A_C | chr9:113221413 | -0.305 | -0.214 | -0.052 | — |
| chr9_113221452_T_A | chr9:113221452 | -0.021 | -0.109 | -0.484 | — |
| chr9_113221507_G_T | chr9:113221507 | 0.198 | 0.227 | 0.484 | — |
| chr9_113221536_G_A | chr9:113221536 | 0.000 | 0.585 | 0.471 | — |
| chr9_113275647_C_A | chr9:113275647 | -0.177 | -0.051 | -0.471 | — |
| chr9_113275647_C_G | chr9:113275647 | -0.134 | -0.038 | -0.471 | — |
| chr9_113275661_C_A | chr9:113275661 | 0.295 | 0.217 | 0.314 | — |
| chr9_113221446_G_C | chr9:113221446 | 0.293 | 0.147 | 0.065 | — |
| chr9_113275524_A_G | chr9:113275524 | -0.293 | -0.102 | -0.196 | — |
| chr9_113221452_T_C | chr9:113221452 | -0.173 | -0.160 | -0.458 | — |
| chr9_113275646_C_G | chr9:113275646 | -0.142 | -0.035 | -0.458 | — |
| chr9_113221408_G_T | chr9:113221408 | 0.287 | 0.067 | 0.301 | — |
| chr9_113221415_A_T | chr9:113221415 | -0.285 | -0.045 | -0.105 | — |
| chr9_113221440_A_T | chr9:113221440 | -0.186 | -0.048 | -0.444 | 0.0086% |
| chr9_113221455_C_A | chr9:113221455 | 0.262 | -0.058 | -0.444 | — |
| chr9_113221459_A_C | chr9:113221459 | -0.254 | -0.070 | -0.444 | — |
| chr9_113221459_A_G | chr9:113221459 | -0.270 | -0.077 | -0.444 | — |
| chr9_113275644_T_C | chr9:113275644 | -0.173 | -0.003 | -0.444 | — |
| chr9_113275645_T_A | chr9:113275645 | -0.204 | 0.006 | -0.444 | — |
| chr9_113275579_C_G | chr9:113275579 | -0.278 | -0.537 | 0.366 | — |
| chr9_113221413_A_T | chr9:113221413 | -0.276 | -0.211 | -0.196 | — |
| chr9_113221423_G_A | chr9:113221423 | 0.274 | 0.169 | 0.183 | <0.001% |
| chr9_113221454_A_C | chr9:113221454 | 0.274 | -0.073 | -0.340 | — |
| chr9_113221530_C_A | chr9:113221530 | 0.274 | 0.278 | 0.275 | — |
| chr9_113275688_C_G | chr9:113275688 | -0.274 | -0.064 | -0.052 | — |
| chr9_113221414_A_T | chr9:113221414 | -0.272 | -0.192 | -0.144 | — |
| chr9_113221441_C_G | chr9:113221441 | -0.179 | -0.032 | -0.431 | — |
| chr9_113275509_G_T | chr9:113275509 | -0.272 | -0.275 | -0.222 | — |
| chr9_113275654_T_A | chr9:113275654 | 0.157 | -0.182 | -0.431 | — |
| chr9_113275676_G_C | chr9:113275676 | -0.023 | -0.061 | 0.431 | — |
| chr9_113275541_C_A | chr9:113275541 | 0.270 | 0.415 | 0.235 | — |
| chr9_113275672_C_G | chr9:113275672 | -0.266 | -0.099 | -0.078 | <0.001% |
| chr9_113221439_C_G | chr9:113221439 | -0.200 | -0.026 | -0.418 | — |
| chr9_113221439_C_T | chr9:113221439 | -0.153 | 0.042 | -0.418 | — |
| chr9_113221460_G_T | chr9:113221460 | 0.245 | 0.026 | 0.418 | — |
| chr9_113275628_C_G | chr9:113275628 | -0.264 | -0.182 | 0.366 | — |
| chr9_113275649_G_A | chr9:113275649 | -0.109 | 0.013 | -0.418 | — |
| chr9_113221419_A_T | chr9:113221419 | 0.262 | 0.268 | 0.235 | — |
| chr9_113221435_C_T | chr9:113221435 | -0.262 | 0.035 | 0.327 | 0.0080% |
| chr9_113221459_A_T | chr9:113221459 | -0.262 | -0.077 | -0.392 | — |
| chr9_113221416_G_T | chr9:113221416 | -0.258 | -0.275 | -0.301 | — |
| chr9_113275701_A_G | chr9:113275701 | -0.258 | -0.077 | -0.288 | — |
| chr9_113221441_C_A | chr9:113221441 | -0.072 | 0.102 | -0.405 | <0.001% |
| chr9_113275560_C_G | chr9:113275560 | -0.087 | -0.137 | -0.405 | — |
| chr9_113275645_T_G | chr9:113275645 | -0.194 | -0.035 | -0.405 | — |
| chr9_113275648_T_A | chr9:113275648 | -0.216 | -0.013 | -0.405 | — |
| chr9_113275657_C_A | chr9:113275657 | -0.002 | -0.211 | -0.405 | — |
| chr9_113221484_G_T | chr9:113221484 | -0.254 | 0.173 | 0.065 | — |
| chr9_113221438_G_C | chr9:113221438 | -0.249 | -0.010 | -0.209 | — |
| chr9_113221424_A_T | chr9:113221424 | 0.245 | 0.163 | 0.261 | — |
| chr9_113221418_C_A | chr9:113221418 | -0.243 | -0.147 | -0.196 | — |
| chr9_113275540_G_T | chr9:113275540 | 0.243 | 0.089 | 0.078 | <0.001% |
| chr9_113275557_C_T | chr9:113275557 | -0.243 | -0.195 | -0.275 | — |
| chr9_113221432_G_A | chr9:113221432 | 0.159 | 0.252 | 0.379 | — |
| chr9_113221437_G_A | chr9:113221437 | -0.239 | -0.160 | -0.105 | — |
| chr9_113221440_A_G | chr9:113221440 | -0.239 | -0.013 | -0.353 | — |
| chr9_113221457_T_C | chr9:113221457 | -0.047 | -0.019 | -0.379 | — |
| chr9_113221420_A_T | chr9:113221420 | -0.233 | 0.086 | 0.000 | — |
| chr9_113275620_G_A | chr9:113275620 | 0.233 | 0.479 | 0.209 | <0.001% |
| chr9_113221440_A_C | chr9:113221440 | -0.144 | -0.003 | -0.366 | — |
| chr9_113221484_G_C | chr9:113221484 | -0.231 | 0.169 | 0.105 | — |
| chr9_113275515_T_G | chr9:113275515 | 0.231 | 0.358 | 0.105 | — |
| chr9_113275518_T_A | chr9:113275518 | 0.192 | 0.026 | 0.366 | — |
| chr9_113275643_C_A | chr9:113275643 | 0.054 | 0.051 | -0.366 | — |
| chr9_113275643_C_G | chr9:113275643 | -0.113 | -0.048 | -0.366 | — |
| chr9_113275679_C_T | chr9:113275679 | 0.066 | 0.029 | 0.366 | <0.001% |
| chr9_113221484_G_A | chr9:113221484 | -0.229 | 0.211 | 0.013 | — |
| chr9_113275639_C_A | chr9:113275639 | 0.229 | -0.137 | -0.261 | — |
| chr9_113221537_G_T | chr9:113221537 | 0.016 | 0.703 | 0.131 | — |
| chr9_113275640_G_T | chr9:113275640 | 0.227 | 0.067 | 0.092 | — |
| chr9_113221420_A_C | chr9:113221420 | -0.225 | 0.118 | 0.275 | — |
| chr9_113221427_G_T | chr9:113221427 | -0.225 | -0.160 | -0.248 | — |
| chr9_113221452_T_G | chr9:113221452 | 0.058 | -0.147 | -0.353 | — |
| chr9_113221481_G_C | chr9:113221481 | -0.223 | 0.035 | -0.131 | — |
| chr9_113221530_C_G | chr9:113221530 | 0.136 | -0.029 | -0.353 | — |
| chr9_113221536_G_T | chr9:113221536 | 0.045 | 0.326 | 0.353 | — |
| chr9_113275522_G_T | chr9:113275522 | -0.223 | -0.131 | -0.131 | — |
| chr9_113275654_T_G | chr9:113275654 | 0.223 | -0.217 | -0.314 | <0.001% |
| chr9_113221426_A_C | chr9:113221426 | -0.221 | -0.105 | -0.078 | <0.001% |
| chr9_113221470_G_T | chr9:113221470 | -0.221 | -0.118 | -0.183 | — |
| chr9_113221537_G_C | chr9:113221537 | 0.064 | 0.681 | 0.340 | — |
| chr9_113275521_T_G | chr9:113275521 | 0.219 | 0.374 | 0.052 | — |
| chr9_113221407_T_A | chr9:113221407 | -0.216 | -0.137 | -0.209 | — |
| chr9_113221422_T_C | chr9:113221422 | 0.216 | 0.086 | 0.170 | — |
| chr9_113221432_G_C | chr9:113221432 | 0.216 | 0.150 | 0.144 | — |
| chr9_113221485_G_A | chr9:113221485 | -0.216 | 0.147 | 0.026 | — |
| chr9_113275509_G_A | chr9:113275509 | -0.216 | -0.310 | -0.183 | — |
| chr9_113221435_C_A | chr9:113221435 | 0.087 | 0.316 | 0.340 | — |
| chr9_113221481_G_A | chr9:113221481 | -0.214 | 0.006 | -0.170 | — |
| chr9_113221536_G_C | chr9:113221536 | 0.039 | 0.435 | 0.340 | — |
| chr9_113275509_G_C | chr9:113275509 | -0.214 | -0.233 | -0.183 | — |
| chr9_113275676_G_A | chr9:113275676 | 0.078 | -0.029 | 0.340 | <0.001% |
| chr9_113275678_G_C | chr9:113275678 | 0.111 | 0.022 | 0.340 | — |
| chr9_113221417_G_A | chr9:113221417 | -0.212 | -0.080 | -0.209 | — |
| chr9_113221512_G_A | chr9:113221512 | 0.210 | -0.051 | 0.209 | — |
| chr9_113221538_G_C | chr9:113221538 | 0.060 | 0.652 | 0.000 | — |
| chr9_113275541_C_G | chr9:113275541 | 0.210 | 0.259 | 0.118 | — |
| chr9_113275544_C_T | chr9:113275544 | 0.210 | 0.179 | 0.196 | <0.001% |
| chr9_113275664_C_G | chr9:113275664 | 0.210 | 0.080 | 0.301 | — |
| chr9_113221433_C_A | chr9:113221433 | 0.208 | 0.160 | 0.222 | — |
| chr9_113275656_A_T | chr9:113275656 | 0.208 | -0.077 | -0.131 | — |
| chr9_113221409_G_C | chr9:113221409 | 0.060 | -0.173 | 0.327 | — |
| chr9_113275559_C_A | chr9:113275559 | -0.109 | -0.054 | -0.327 | — |
| chr9_113275571_A_G | chr9:113275571 | 0.118 | -0.182 | 0.327 | — |
| chr9_113275679_C_A | chr9:113275679 | 0.163 | 0.019 | 0.327 | — |
| chr9_113275541_C_T | chr9:113275541 | 0.204 | 0.217 | 0.078 | — |
| chr9_113275579_C_A | chr9:113275579 | -0.204 | -0.374 | 0.170 | — |
| chr9_113275539_T_A | chr9:113275539 | -0.202 | -0.128 | -0.026 | — |
| chr9_113221437_G_C | chr9:113221437 | -0.200 | -0.118 | -0.222 | — |
| chr9_113221451_G_T | chr9:113221451 | -0.200 | 0.160 | -0.222 | — |
| chr9_113275663_T_C | chr9:113275663 | 0.200 | -0.029 | 0.052 | — |
| chr9_113221442_G_A | chr9:113221442 | 0.085 | 0.230 | -0.314 | — |
| chr9_113221478_C_G | chr9:113221478 | 0.198 | 0.058 | 0.092 | — |
| chr9_113275534_A_T | chr9:113275534 | -0.198 | -0.102 | -0.039 | — |
| chr9_113275560_C_T | chr9:113275560 | -0.019 | -0.013 | -0.314 | — |
| chr9_113275578_C_T | chr9:113275578 | -0.080 | -0.195 | 0.314 | — |
| chr9_113275642_A_T | chr9:113275642 | -0.041 | -0.073 | -0.314 | — |
| chr9_113275655_G_A | chr9:113275655 | 0.142 | -0.224 | -0.314 | — |
| chr9_113275660_A_T | chr9:113275660 | 0.097 | -0.121 | -0.314 | — |
| chr9_113275693_T_G | chr9:113275693 | 0.008 | 0.058 | 0.314 | <0.001% |
| chr9_113221509_T_A | chr9:113221509 | -0.194 | -0.233 | -0.065 | — |
| chr9_113221516_G_A | chr9:113221516 | 0.192 | 0.099 | 0.026 | — |
| chr9_113221424_A_C | chr9:113221424 | 0.155 | 0.077 | 0.301 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.