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PTDSS2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near PTDSS2
chr11:348,267..591,400, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_356049_G_C | chr11:356049 | -1.000 | -0.700 | -0.772 | — |
| chr11_356050_G_C | chr11:356050 | -1.000 | -0.647 | -0.819 | — |
| chr11_353664_G_T | chr11:353664 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356046_G_T | chr11:356046 | -1.000 | -0.528 | -0.643 | — |
| chr11_356109_G_C | chr11:356109 | -1.000 | -0.305 | -0.415 | — |
| chr11_356050_G_A | chr11:356050 | -1.000 | -0.584 | -0.749 | — |
| chr11_353519_C_T | chr11:353519 | 1.000 | 0.751 | 1.000 | <0.001% |
| chr11_356108_T_G | chr11:356108 | -1.000 | -0.190 | -0.895 | — |
| chr11_356047_G_C | chr11:356047 | -1.000 | -0.529 | -0.667 | — |
| chr11_353543_G_A | chr11:353543 | 1.000 | 0.687 | 1.000 | 5.75% |
| chr11_356046_G_A | chr11:356046 | -1.000 | -0.552 | -0.643 | <0.001% |
| chr11_356007_A_G | chr11:356007 | -1.000 | -0.519 | -0.772 | <0.001% |
| chr11_356008_G_T | chr11:356008 | -1.000 | -0.559 | -0.813 | — |
| chr11_356047_G_T | chr11:356047 | -1.000 | -0.452 | -0.678 | — |
| chr11_356380_G_A | chr11:356380 | -1.000 | -0.323 | -1.000 | 0.0045% |
| chr11_356046_G_C | chr11:356046 | -1.000 | -0.506 | -0.702 | — |
| chr11_356107_G_A | chr11:356107 | -1.000 | -0.296 | -0.357 | — |
| chr11_356008_G_C | chr11:356008 | -1.000 | -0.501 | -0.673 | — |
| chr11_356049_G_A | chr11:356049 | -1.000 | -0.481 | -0.444 | — |
| chr11_353701_T_G | chr11:353701 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356047_G_A | chr11:356047 | -1.000 | -0.411 | -0.643 | — |
| chr11_356106_G_A | chr11:356106 | -1.000 | -0.253 | -0.281 | — |
| chr11_356104_G_C | chr11:356104 | -1.000 | -0.241 | -0.234 | — |
| chr11_356051_G_C | chr11:356051 | -1.000 | -0.380 | -0.526 | — |
| chr11_353697_G_C | chr11:353697 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr11_356053_C_G | chr11:356053 | -1.000 | -0.241 | -0.901 | — |
| chr11_356106_G_T | chr11:356106 | -1.000 | -0.159 | -0.240 | — |
| chr11_356048_C_G | chr11:356048 | -1.000 | -0.139 | -0.854 | — |
| chr11_355996_G_A | chr11:355996 | -1.000 | -0.623 | -0.765 | 0.011% |
| chr11_356107_G_C | chr11:356107 | -0.975 | -0.190 | -0.193 | — |
| chr11_356049_G_T | chr11:356049 | -0.970 | -0.461 | -0.351 | — |
| chr11_356105_G_T | chr11:356105 | -0.962 | -0.228 | -0.140 | 0.0020% |
| chr11_355990_T_C | chr11:355990 | -1.000 | -0.300 | -0.464 | 0.012% |
| chr11_356092_C_A | chr11:356092 | -0.950 | -0.397 | -0.468 | — |
| chr11_356107_G_T | chr11:356107 | -0.947 | -0.181 | -0.222 | — |
| chr11_356045_G_T | chr11:356045 | -0.942 | -0.332 | -0.374 | — |
| chr11_364642_C_A | chr11:364642 | -0.973 | -0.605 | -1.000 | <0.001% |
| chr11_355998_C_G | chr11:355998 | -1.000 | -0.393 | -0.582 | <0.001% |
| chr11_356110_G_A | chr11:356110 | -0.925 | -0.118 | -0.269 | — |
| chr11_355997_G_A | chr11:355997 | -1.000 | -0.548 | -0.739 | 0.0013% |
| chr11_356106_G_C | chr11:356106 | -0.896 | -0.155 | -0.082 | — |
| chr11_356105_G_A | chr11:356105 | -0.894 | -0.198 | -0.158 | 0.014% |
| chr11_356007_A_T | chr11:356007 | -0.881 | -0.438 | -0.591 | — |
| chr11_356010_A_T | chr11:356010 | 0.881 | 1.000 | 1.000 | — |
| chr11_353486_C_T | chr11:353486 | -1.000 | -0.374 | -0.660 | 0.0098% |
| chr11_356052_G_T | chr11:356052 | -0.859 | -0.286 | -0.409 | — |
| chr11_356112_G_C | chr11:356112 | -0.853 | -0.140 | -0.292 | — |
| chr11_353463_C_T | chr11:353463 | 1.000 | 0.875 | 0.660 | 0.0046% |
| chr11_356396_G_A | chr11:356396 | -1.000 | -0.471 | -0.850 | 0.0032% |
| chr11_356110_G_C | chr11:356110 | -0.836 | -0.047 | -0.064 | — |
| chr11_356052_G_C | chr11:356052 | -0.810 | -0.291 | -0.444 | — |
| chr11_353477_G_T | chr11:353477 | -1.000 | -0.526 | -0.739 | <0.001% |
| chr11_356062_G_T | chr11:356062 | -0.805 | -0.324 | -0.503 | — |
| chr11_364639_C_A | chr11:364639 | -0.795 | -0.494 | -1.000 | <0.001% |
| chr11_353479_C_T | chr11:353479 | -0.988 | -0.494 | -0.856 | <0.001% |
| chr11_356051_G_T | chr11:356051 | -0.788 | -0.209 | -0.222 | — |
| chr11_356105_G_C | chr11:356105 | -0.783 | -0.207 | -0.012 | — |
| chr11_356183_G_C | chr11:356183 | 0.456 | 0.356 | 1.000 | <0.001% |
| chr11_356182_G_C | chr11:356182 | 0.392 | 0.492 | 1.000 | 0.0069% |
| chr11_356185_G_A | chr11:356185 | 0.485 | 0.415 | 1.000 | 0.0026% |
| chr11_356007_A_C | chr11:356007 | -0.750 | -0.244 | -0.368 | — |
| chr11_356104_G_A | chr11:356104 | -0.742 | -0.146 | -0.082 | — |
| chr11_356103_G_T | chr11:356103 | -0.733 | -0.161 | -0.053 | — |
| chr11_364639_C_T | chr11:364639 | -0.759 | -0.436 | -1.000 | 0.0013% |
| chr11_356103_G_C | chr11:356103 | -0.717 | -0.139 | -0.029 | — |
| chr11_353630_G_A | chr11:353630 | -0.882 | -0.974 | -0.908 | 7.22% |
| chr11_356140_G_C | chr11:356140 | -0.707 | -0.084 | -0.216 | — |
| chr11_356052_G_A | chr11:356052 | -0.700 | -0.196 | -0.316 | — |
| chr11_356045_G_C | chr11:356045 | -0.699 | -0.208 | -0.327 | — |
| chr11_356070_A_T | chr11:356070 | 0.682 | 0.462 | 0.725 | — |
| chr11_356062_G_C | chr11:356062 | -0.669 | -0.162 | -0.281 | — |
| chr11_356113_C_G | chr11:356113 | -0.669 | -0.019 | -0.632 | — |
| chr11_368490_C_A | chr11:368490 | 0.623 | 0.358 | 1.000 | <0.001% |
| chr11_356391_C_A | chr11:356391 | -0.816 | -0.296 | -0.928 | 0.0011% |
| chr11_356092_C_G | chr11:356092 | -0.649 | -0.271 | -0.251 | — |
| chr11_356017_T_C | chr11:356017 | -0.642 | -0.377 | -0.409 | — |
| chr11_356044_G_C | chr11:356044 | -0.642 | -0.222 | -0.234 | — |
| chr11_356029_G_T | chr11:356029 | 0.634 | 0.356 | 0.456 | — |
| chr11_353651_C_T | chr11:353651 | 0.771 | 1.000 | 0.824 | 0.728% |
| chr11_356136_A_G | chr11:356136 | -0.618 | -0.140 | -0.556 | — |
| chr11_356162_G_A | chr11:356162 | 0.443 | 0.404 | 1.000 | 0.0055% |
| chr11_356207_G_A | chr11:356207 | 0.351 | 0.313 | 1.000 | 0.0045% |
| chr11_364633_C_T | chr11:364633 | -0.764 | -0.353 | -1.000 | 0.0060% |
| chr11_356012_A_G | chr11:356012 | -0.609 | -0.431 | -0.444 | — |
| chr11_356207_G_C | chr11:356207 | 0.301 | 0.262 | 1.000 | 0.016% |
| chr11_356076_G_C | chr11:356076 | -0.603 | -0.099 | -0.228 | — |
| chr11_356103_G_A | chr11:356103 | -0.599 | -0.128 | 0.047 | — |
| chr11_356013_A_C | chr11:356013 | -0.594 | -0.385 | -0.234 | — |
| chr11_356112_G_T | chr11:356112 | -0.588 | -0.086 | -0.287 | — |
| chr11_356160_G_A | chr11:356160 | 0.487 | 0.289 | 1.000 | <0.001% |
| chr11_356028_C_A | chr11:356028 | 0.568 | 0.455 | 0.491 | — |
| chr11_356395_C_T | chr11:356395 | -0.707 | -0.321 | -0.758 | 0.0035% |
| chr11_356112_G_A | chr11:356112 | -0.566 | -0.086 | -0.269 | — |
| chr11_356048_C_T | chr11:356048 | -0.565 | -0.183 | -0.257 | — |
| chr11_356050_G_T | chr11:356050 | -0.565 | -0.305 | -0.140 | — |
| chr11_356397_G_A | chr11:356397 | -0.699 | -0.217 | -0.784 | 0.017% |
| chr11_353683_G_T | chr11:353683 | -0.693 | -0.824 | -0.830 | <0.001% |
| chr11_356026_G_C | chr11:356026 | -0.556 | -0.094 | -0.082 | — |
| chr11_356184_G_A | chr11:356184 | 0.466 | 0.233 | 1.000 | <0.001% |
| chr11_353520_G_T | chr11:353520 | -0.678 | -0.479 | -0.281 | <0.001% |
| chr11_356017_T_A | chr11:356017 | -0.543 | -0.244 | -0.023 | <0.001% |
| chr11_356104_G_T | chr11:356104 | -0.540 | -0.067 | -0.018 | — |
| chr11_356159_G_A | chr11:356159 | 0.518 | 0.251 | 1.000 | <0.001% |
| chr11_356041_A_G | chr11:356041 | -0.525 | -0.203 | -0.292 | — |
| chr11_356042_A_C | chr11:356042 | -0.525 | -0.175 | -0.281 | — |
| chr11_356091_C_A | chr11:356091 | -0.520 | -0.170 | -0.158 | — |
| chr11_356308_C_T | chr11:356308 | 0.637 | 0.427 | 0.065 | 0.0033% |
| chr11_356041_A_T | chr11:356041 | -0.502 | -0.072 | -0.058 | — |
| chr11_356055_T_C | chr11:356055 | -0.493 | -0.212 | -0.152 | <0.001% |
| chr11_353520_G_C | chr11:353520 | -0.612 | -0.335 | -0.176 | <0.001% |
| chr11_356014_C_G | chr11:356014 | -0.490 | -0.336 | -0.368 | — |
| chr11_356181_G_A | chr11:356181 | 0.291 | 0.332 | 0.967 | 0.0043% |
| chr11_356018_C_A | chr11:356018 | 0.478 | 0.252 | 0.474 | 0.0033% |
| chr11_356074_C_G | chr11:356074 | -0.477 | -0.185 | -0.275 | — |
| chr11_356092_C_T | chr11:356092 | -0.477 | -0.205 | -0.246 | — |
| chr11_356096_A_G | chr11:356096 | -0.474 | -0.217 | -0.409 | — |
| chr11_353637_C_G | chr11:353637 | -0.586 | -0.569 | -0.556 | <0.001% |
| chr11_356089_G_T | chr11:356089 | 0.470 | 0.105 | 0.158 | — |
| chr11_356090_G_A | chr11:356090 | -0.470 | -0.120 | -0.064 | 4.44% |
| chr11_353520_G_A | chr11:353520 | -0.581 | -0.412 | 0.144 | <0.001% |
| chr11_356076_G_T | chr11:356076 | -0.460 | -0.162 | -0.333 | — |
| chr11_356013_A_G | chr11:356013 | -0.459 | -0.304 | -0.193 | <0.001% |
| chr11_356158_G_A | chr11:356158 | 0.406 | 0.292 | 0.902 | <0.001% |
| chr11_356084_A_G | chr11:356084 | -0.454 | -0.348 | -0.368 | <0.001% |
| chr11_356072_A_G | chr11:356072 | -0.442 | -0.316 | -0.298 | — |
| chr11_355957_G_T | chr11:355957 | 0.548 | 0.375 | 0.131 | 17.2% |
| chr11_356082_A_T | chr11:356082 | 0.437 | 0.137 | 0.263 | — |
| chr11_356387_C_T | chr11:356387 | -0.542 | -0.159 | -0.418 | 0.0061% |
| chr11_356009_G_T | chr11:356009 | -0.434 | -0.267 | -0.251 | — |
| chr11_356070_A_C | chr11:356070 | 0.434 | 0.139 | 0.281 | — |
| chr11_355948_C_G | chr11:355948 | 0.532 | 0.302 | 0.144 | 0.170% |
| chr11_356001_T_G | chr11:356001 | -0.532 | -0.145 | -0.183 | <0.001% |
| chr11_356211_G_C | chr11:356211 | 0.177 | 0.225 | 0.837 | <0.001% |
| chr11_356094_G_C | chr11:356094 | -0.417 | -0.166 | -0.117 | 0.0027% |
| chr11_356158_G_C | chr11:356158 | 0.324 | 0.267 | 0.824 | 0.491% |
| chr11_356036_A_G | chr11:356036 | -0.414 | -0.162 | -0.222 | — |
| chr11_356123_C_A | chr11:356123 | -0.414 | -0.164 | -0.398 | — |
| chr11_356135_G_T | chr11:356135 | 0.108 | 0.378 | 0.719 | — |
| chr11_356163_G_A | chr11:356163 | 0.181 | 0.302 | 0.797 | 0.0015% |
| chr11_356109_G_A | chr11:356109 | -0.401 | -0.057 | 0.047 | — |
| chr11_356388_C_G | chr11:356388 | -0.495 | -0.158 | -0.392 | 0.0021% |
| chr11_353674_C_A | chr11:353674 | -0.493 | -0.735 | -0.667 | <0.001% |
| chr11_356018_C_G | chr11:356018 | 0.394 | 0.145 | 0.357 | — |
| chr11_356110_G_T | chr11:356110 | -0.394 | -0.083 | 0.018 | — |
| chr11_356159_G_T | chr11:356159 | 0.136 | 0.061 | 0.771 | <0.001% |
| chr11_356020_C_T | chr11:356020 | 0.389 | 0.198 | -0.105 | — |
| chr11_356029_G_C | chr11:356029 | 0.387 | 0.224 | 0.327 | — |
| chr11_356033_G_A | chr11:356033 | 0.387 | 0.115 | 0.269 | — |
| chr11_353568_G_C | chr11:353568 | 0.478 | 0.230 | 0.078 | <0.001% |
| chr11_356053_C_T | chr11:356053 | -0.384 | -0.120 | -0.269 | — |
| chr11_356082_A_C | chr11:356082 | 0.384 | 0.063 | 0.135 | — |
| chr11_356096_A_T | chr11:356096 | -0.156 | 0.447 | 0.678 | — |
| chr11_356091_C_G | chr11:356091 | -0.381 | -0.043 | -0.129 | — |
| chr11_356157_G_T | chr11:356157 | 0.087 | 0.327 | 0.745 | 0.0050% |
| chr11_356093_A_G | chr11:356093 | -0.374 | -0.141 | -0.135 | — |
| chr11_356011_A_T | chr11:356011 | -0.373 | -0.247 | -0.310 | — |
| chr11_356085_G_A | chr11:356085 | 0.371 | 0.136 | 0.228 | — |
| chr11_356094_G_T | chr11:356094 | -0.371 | -0.198 | -0.193 | — |
| chr11_356060_C_T | chr11:356060 | -0.369 | -0.247 | -0.234 | — |
| chr11_356081_G_A | chr11:356081 | -0.368 | -0.081 | -0.035 | — |
| chr11_356135_G_C | chr11:356135 | 0.368 | 0.018 | 0.123 | — |
| chr11_356314_G_C | chr11:356314 | -0.386 | -0.101 | -0.719 | <0.001% |
| chr11_356009_G_C | chr11:356009 | -0.363 | -0.223 | -0.175 | <0.001% |
| chr11_356027_A_C | chr11:356027 | 0.363 | 0.108 | 0.246 | — |
| chr11_353635_T_C | chr11:353635 | 0.449 | 0.415 | 0.458 | 0.683% |
| chr11_356091_C_T | chr11:356091 | -0.361 | -0.089 | -0.123 | — |
| chr11_356060_C_G | chr11:356060 | -0.358 | -0.155 | -0.199 | — |
| chr11_356038_T_G | chr11:356038 | -0.356 | -0.139 | -0.117 | — |
| chr11_356062_G_A | chr11:356062 | 0.351 | 0.435 | 0.444 | — |
| chr11_356122_G_C | chr11:356122 | -0.349 | 0.188 | 0.450 | — |
| chr11_356013_A_T | chr11:356013 | -0.346 | -0.198 | -0.123 | — |
| chr11_356009_G_A | chr11:356009 | -0.344 | -0.214 | -0.281 | — |
| chr11_356042_A_T | chr11:356042 | -0.344 | -0.098 | -0.164 | — |
| chr11_364634_G_A | chr11:364634 | 0.427 | 0.160 | 0.405 | 0.022% |
| chr11_355973_T_C | chr11:355973 | -0.425 | -0.284 | -0.366 | 0.0040% |
| chr11_356083_A_T | chr11:356083 | 0.338 | 0.165 | 0.216 | — |
| chr11_356080_T_A | chr11:356080 | 0.334 | 0.092 | 0.058 | <0.001% |
| chr11_356045_G_A | chr11:356045 | -0.331 | -0.099 | -0.187 | — |
| chr11_356090_G_T | chr11:356090 | -0.331 | -0.150 | -0.246 | — |
| chr11_356042_A_G | chr11:356042 | -0.328 | -0.149 | -0.187 | 88.4% |
| chr11_356068_G_A | chr11:356068 | -0.328 | -0.171 | -0.368 | — |
| chr11_356141_C_T | chr11:356141 | -0.242 | -0.190 | -0.579 | — |
| chr11_356111_G_C | chr11:356111 | -0.326 | 0.073 | 0.058 | — |
| chr11_356020_C_A | chr11:356020 | 0.325 | 0.141 | -0.175 | — |
| chr11_356039_G_C | chr11:356039 | 0.323 | 0.321 | 0.444 | — |
| chr11_356025_C_T | chr11:356025 | 0.321 | 0.102 | 0.281 | — |
| chr11_356093_A_C | chr11:356093 | -0.318 | -0.091 | -0.088 | — |
| chr11_356014_C_T | chr11:356014 | -0.315 | -0.155 | -0.105 | 0.0026% |
| chr11_356071_A_C | chr11:356071 | 0.310 | 0.152 | 0.170 | — |
| chr11_356015_A_T | chr11:356015 | -0.305 | -0.125 | -0.181 | — |
| chr11_356021_G_C | chr11:356021 | 0.305 | 0.067 | 0.012 | — |
| chr11_356066_G_T | chr11:356066 | 0.305 | 0.268 | 0.199 | — |
| chr11_353588_G_C | chr11:353588 | 0.377 | 0.415 | 0.288 | 0.012% |
| chr11_364695_C_T | chr11:364695 | 0.376 | 0.141 | 0.405 | 0.0033% |
| chr11_353634_T_C | chr11:353634 | -0.373 | -0.454 | -0.477 | <0.001% |
| chr11_356156_G_A | chr11:356156 | 0.138 | 0.227 | 0.588 | 0.0015% |
| chr11_356383_C_T | chr11:356383 | -0.371 | -0.163 | -0.203 | 0.010% |
| chr11_356123_C_G | chr11:356123 | -0.194 | 0.307 | 0.520 | — |
| chr11_356134_G_T | chr11:356134 | 0.293 | -0.013 | -0.082 | — |
| chr11_356015_A_G | chr11:356015 | -0.291 | -0.219 | -0.041 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.