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SCARA3

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near SCARA3

chr8:27,533,901..27,776,769, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr8_27566806_A_G	chr8:27566806	0.275	0.564	0.520	<0.001%
chr8_27558906_A_C	chr8:27558906	-0.179	-0.436	-0.497	<0.001%
chr8_27558981_A_G	chr8:27558981	0.175	0.374	0.484	0.0013%
chr8_27558902_G_C	chr8:27558902	-0.185	-0.442	-0.412	0.0085%
chr8_27566268_C_A	chr8:27566268	0.066	0.042	0.399	—
chr8_27558412_A_T	chr8:27558412	0.035	0.056	-0.366	<0.001%
chr8_27566251_A_C	chr8:27566251	0.057	0.145	0.366	—
chr8_27558991_T_G	chr8:27558991	-0.137	-0.260	-0.346	<0.001%
chr8_27566261_T_C	chr8:27566261	-0.052	0.022	-0.346	—
chr8_27558963_C_T	chr8:27558963	-0.113	-0.217	-0.314	<0.001%
chr8_27558164_C_G	chr8:27558164	0.025	0.026	0.301	0.0013%
chr8_27566843_T_C	chr8:27566843	0.139	0.236	0.301	0.0013%
chr8_27558168_A_C	chr8:27558168	-0.023	-0.091	-0.288	<0.001%
chr8_27567035_A_C	chr8:27567035	0.020	0.018	0.275	0.0033%
chr8_27566332_A_T	chr8:27566332	0.045	0.035	0.268	—
chr8_27558868_G_T	chr8:27558868	0.139	0.212	0.261	0.0013%
chr8_27566332_A_C	chr8:27566332	-0.051	-0.038	-0.261	—
chr8_27558865_G_T	chr8:27558865	0.089	0.168	0.255	0.0013%
chr8_27558880_G_T	chr8:27558880	-0.068	-0.174	-0.255	<0.001%
chr8_27566886_G_C	chr8:27566886	0.152	0.321	0.248	<0.001%
chr8_27559201_G_A	chr8:27559201	0.088	0.113	0.235	<0.001%
chr8_27558841_T_C	chr8:27558841	0.076	0.145	0.229	<0.001%
chr8_27558867_G_T	chr8:27558867	0.091	0.139	0.222	<0.001%
chr8_27566253_G_T	chr8:27566253	0.014	0.070	0.222	—
chr8_27558812_C_T	chr8:27558812	0.021	0.038	0.216	<0.001%
chr8_27558392_A_G	chr8:27558392	0.062	0.091	0.209	0.0026%
chr8_27566253_G_C	chr8:27566253	0.012	0.016	0.209	—
chr8_27566300_G_C	chr8:27566300	0.011	0.022	0.209	—
chr8_27566308_A_C	chr8:27566308	-0.039	-0.040	-0.209	—
chr8_27567031_A_C	chr8:27567031	0.009	0.002	0.209	0.0033%
chr8_27566802_A_G	chr8:27566802	0.086	0.173	0.203	0.102%
chr8_27558265_T_C	chr8:27558265	0.071	0.032	0.196	<0.001%
chr8_27558414_G_C	chr8:27558414	0.062	0.037	-0.183	<0.001%
chr8_27558924_C_A	chr8:27558924	-0.060	-0.094	-0.183	<0.001%
chr8_27559204_C_G	chr8:27559204	0.054	0.080	0.183	<0.001%
chr8_27559227_C_A	chr8:27559227	-0.031	-0.035	-0.183	<0.001%
chr8_27558266_G_T	chr8:27558266	-0.022	0.014	-0.176	0.0013%
chr8_27559239_T_C	chr8:27559239	0.047	0.069	0.176	<0.001%
chr8_27567074_A_G	chr8:27567074	0.000	0.006	0.176	0.0026%
chr8_27558933_C_T	chr8:27558933	0.107	0.168	0.137	<0.001%
chr8_27559056_C_T	chr8:27559056	0.085	0.161	0.170	<0.001%
chr8_27566276_G_C	chr8:27566276	-0.016	-0.016	-0.170	—
chr8_27566308_A_G	chr8:27566308	-0.026	-0.043	-0.170	—
chr8_27566820_G_A	chr8:27566820	0.093	0.220	0.167	0.326%
chr8_27566252_G_C	chr8:27566252	0.022	0.018	0.163	—
chr8_27566308_A_T	chr8:27566308	-0.026	-0.021	-0.163	—
chr8_27542159_T_C	chr8:27542159	0.056	0.050	0.157	0.0099%
chr8_27559009_C_A	chr8:27559009	-0.033	-0.073	-0.157	5.01%
chr8_27559022_G_A	chr8:27559022	-0.042	-0.089	-0.157	0.0013%
chr8_27559057_C_G	chr8:27559057	0.055	0.081	0.157	0.0033%
chr8_27566242_A_T	chr8:27566242	-0.016	-0.029	-0.157	—
chr8_27566277_C_G	chr8:27566277	0.006	-0.016	-0.157	—
chr8_27566277_C_T	chr8:27566277	0.013	-0.003	-0.157	—
chr8_27566300_G_A	chr8:27566300	0.022	0.022	0.157	—
chr8_27558829_C_A	chr8:27558829	0.010	0.048	0.150	0.0039%
chr8_27558855_T_C	chr8:27558855	0.045	0.085	0.150	<0.001%
chr8_27559202_G_A	chr8:27559202	0.057	0.081	0.150	0.0039%
chr8_27559580_C_G	chr8:27559580	-0.049	-0.029	-0.150	0.0013%
chr8_27559580_C_T	chr8:27559580	-0.028	-0.022	-0.150	0.036%
chr8_27566254_G_C	chr8:27566254	0.013	0.024	0.150	—
chr8_27566257_T_C	chr8:27566257	-0.030	-0.021	-0.150	—
chr8_27566299_G_C	chr8:27566299	0.006	0.019	0.150	—
chr8_27566915_A_G	chr8:27566915	0.068	0.129	0.150	0.0033%
chr8_27558222_C_A	chr8:27558222	0.091	0.152	0.039	<0.001%
chr8_27558809_C_A	chr8:27558809	0.025	0.056	0.144	0.0013%
chr8_27566239_T_G	chr8:27566239	0.055	0.046	0.144	—
chr8_27566246_T_G	chr8:27566246	0.007	0.040	0.144	—
chr8_27566268_C_G	chr8:27566268	0.020	0.014	0.144	—
chr8_27558366_C_G	chr8:27558366	0.020	0.032	0.137	0.0013%
chr8_27559581_G_A	chr8:27559581	-0.037	-0.027	-0.137	0.0026%
chr8_27566252_G_T	chr8:27566252	0.029	0.022	0.137	—
chr8_27566255_G_A	chr8:27566255	0.012	0.037	0.137	—
chr8_27558924_C_T	chr8:27558924	-0.043	-0.097	-0.131	0.0020%
chr8_27566277_C_A	chr8:27566277	0.011	0.002	-0.131	—
chr8_27566293_T_C	chr8:27566293	0.002	-0.005	0.131	—
chr8_27542138_T_C	chr8:27542138	0.005	-0.022	0.124	0.069%
chr8_27558840_A_T	chr8:27558840	0.046	0.188	0.124	0.013%
chr8_27558849_A_T	chr8:27558849	0.031	0.072	0.124	0.622%
chr8_27559055_C_T	chr8:27559055	0.065	0.099	0.124	0.0026%
chr8_27559123_C_T	chr8:27559123	-0.015	-0.005	-0.124	<0.001%
chr8_27566236_G_T	chr8:27566236	0.033	0.016	0.124	—
chr8_27566251_A_T	chr8:27566251	0.014	0.059	0.124	—
chr8_27566276_G_T	chr8:27566276	0.010	0.000	-0.124	—
chr8_27566866_C_T	chr8:27566866	-0.043	-0.109	-0.124	0.0033%
chr8_27558133_C_G	chr8:27558133	0.076	0.088	0.078	<0.001%
chr8_27542143_A_G	chr8:27542143	0.015	-0.013	0.118	<0.001%
chr8_27558114_A_G	chr8:27558114	0.015	0.030	-0.118	<0.001%
chr8_27559002_A_G	chr8:27559002	-0.013	-0.035	-0.118	<0.001%
chr8_27566261_T_A	chr8:27566261	-0.001	-0.019	-0.118	—
chr8_27566286_A_C	chr8:27566286	0.000	-0.003	0.118	—
chr8_27566298_G_C	chr8:27566298	-0.006	0.005	0.118	—
chr8_27566856_C_G	chr8:27566856	-0.058	-0.166	-0.118	<0.001%
chr8_27558234_G_T	chr8:27558234	-0.016	-0.005	-0.111	<0.001%
chr8_27558294_C_T	chr8:27558294	-0.026	-0.014	-0.111	0.032%
chr8_27558472_G_A	chr8:27558472	-0.038	-0.010	-0.111	0.0026%
chr8_27558800_C_G	chr8:27558800	-0.006	-0.003	0.111	0.0079%
chr8_27566242_A_G	chr8:27566242	-0.004	0.018	0.111	0.181%
chr8_27566276_G_A	chr8:27566276	0.011	0.000	-0.111	0.0020%
chr8_27566326_T_G	chr8:27566326	-0.024	0.005	-0.111	—
chr8_27558195_G_T	chr8:27558195	0.066	0.086	-0.013	<0.001%
chr8_27558394_A_G	chr8:27558394	-0.012	-0.029	0.105	0.0013%
chr8_27558448_T_G	chr8:27558448	0.009	-0.034	0.105	<0.001%
chr8_27558479_G_A	chr8:27558479	-0.012	0.002	-0.105	<0.001%
chr8_27558782_G_A	chr8:27558782	-0.010	-0.014	-0.105	0.0079%
chr8_27558882_T_C	chr8:27558882	-0.060	-0.104	-0.105	<0.001%
chr8_27559297_G_T	chr8:27559297	-0.002	-0.021	-0.105	<0.001%
chr8_27566235_A_C	chr8:27566235	0.004	0.019	0.105	—
chr8_27566251_A_G	chr8:27566251	0.004	-0.027	-0.105	—
chr8_27566254_G_T	chr8:27566254	0.022	0.024	0.105	—
chr8_27566266_G_T	chr8:27566266	-0.004	-0.018	-0.105	—
chr8_27566332_A_G	chr8:27566332	0.023	0.018	0.105	—
chr8_27566803_T_C	chr8:27566803	0.036	0.062	0.105	<0.001%
chr8_27542187_A_G	chr8:27542187	0.020	0.003	0.101	41.5%
chr8_27558280_G_A	chr8:27558280	0.003	-0.014	-0.098	0.0020%
chr8_27558375_G_C	chr8:27558375	-0.044	-0.013	-0.098	0.0020%
chr8_27566250_G_C	chr8:27566250	0.024	0.022	0.098	—
chr8_27566262_C_A	chr8:27566262	0.007	0.000	-0.098	—
chr8_27566279_T_C	chr8:27566279	0.000	-0.022	-0.098	—
chr8_27566280_C_G	chr8:27566280	0.006	0.008	0.098	—
chr8_27566294_G_T	chr8:27566294	0.007	-0.003	-0.098	—
chr8_27566321_T_G	chr8:27566321	0.003	-0.011	0.098	—
chr8_27566369_A_G	chr8:27566369	-0.001	-0.006	0.098	<0.001%
chr8_27559182_G_A	chr8:27559182	0.060	0.061	0.078	<0.001%
chr8_27558242_C_A	chr8:27558242	-0.019	0.021	-0.092	3.92%
chr8_27558371_A_C	chr8:27558371	0.022	0.021	0.092	<0.001%
chr8_27558375_G_T	chr8:27558375	-0.013	0.046	-0.092	<0.001%
chr8_27558772_G_A	chr8:27558772	-0.006	-0.005	-0.092	<0.001%
chr8_27558773_G_A	chr8:27558773	-0.005	-0.014	-0.092	<0.001%
chr8_27559218_G_A	chr8:27559218	0.000	-0.013	-0.092	<0.001%
chr8_27566233_T_G	chr8:27566233	0.004	0.002	-0.092	—
chr8_27566243_A_C	chr8:27566243	0.002	0.030	0.092	—
chr8_27566252_G_A	chr8:27566252	0.012	0.008	0.092	<0.001%
chr8_27566253_G_A	chr8:27566253	0.016	0.013	0.092	—
chr8_27566255_G_C	chr8:27566255	0.011	-0.008	0.092	—
chr8_27566278_C_G	chr8:27566278	0.011	-0.005	-0.092	—
chr8_27566301_T_C	chr8:27566301	-0.001	-0.010	0.092	—
chr8_27566821_C_A	chr8:27566821	-0.051	-0.088	-0.092	<0.001%
chr8_27567045_A_C	chr8:27567045	0.004	-0.010	0.092	0.0013%
chr8_27567098_G_T	chr8:27567098	0.022	0.054	-0.092	<0.001%
chr8_27558178_C_G	chr8:27558178	0.023	0.030	0.085	0.0013%
chr8_27558375_G_A	chr8:27558375	-0.002	0.050	-0.085	0.0033%
chr8_27558382_T_C	chr8:27558382	-0.012	-0.018	0.085	<0.001%
chr8_27558408_G_T	chr8:27558408	-0.028	-0.018	-0.085	2.30%
chr8_27558661_A_G	chr8:27558661	0.013	0.016	0.085	<0.001%
chr8_27558756_G_T	chr8:27558756	-0.009	-0.003	-0.085	0.0020%
chr8_27558809_C_T	chr8:27558809	0.008	0.014	0.085	<0.001%
chr8_27558834_T_C	chr8:27558834	0.052	0.134	0.085	<0.001%
chr8_27558952_G_A	chr8:27558952	0.054	0.088	0.065	<0.001%
chr8_27559130_G_A	chr8:27559130	-0.014	-0.013	-0.085	<0.001%
chr8_27559278_G_A	chr8:27559278	-0.006	-0.016	-0.085	<0.001%
chr8_27566236_G_A	chr8:27566236	-0.014	0.021	-0.085	—
chr8_27566254_G_A	chr8:27566254	0.007	0.024	0.085	2.20%
chr8_27566278_C_A	chr8:27566278	0.024	0.014	-0.085	—
chr8_27566278_C_T	chr8:27566278	0.007	0.005	-0.085	—
chr8_27566288_C_A	chr8:27566288	0.004	0.005	-0.085	—
chr8_27566724_T_G	chr8:27566724	0.018	-0.005	0.085	<0.001%
chr8_27566818_A_G	chr8:27566818	-0.051	-0.131	-0.078	<0.001%
chr8_27558147_C_G	chr8:27558147	-0.002	0.029	0.078	0.0026%
chr8_27558300_C_T	chr8:27558300	-0.018	0.010	-0.078	0.0092%
chr8_27558356_C_G	chr8:27558356	-0.043	-0.010	-0.078	<0.001%
chr8_27558473_G_A	chr8:27558473	-0.001	0.035	-0.078	0.0020%
chr8_27558667_G_A	chr8:27558667	-0.007	-0.005	-0.078	<0.001%
chr8_27558751_C_A	chr8:27558751	0.003	0.002	-0.078	0.0013%
chr8_27559081_C_T	chr8:27559081	-0.001	-0.003	-0.078	0.0033%
chr8_27559109_C_T	chr8:27559109	-0.002	-0.022	-0.078	0.0013%
chr8_27559196_C_T	chr8:27559196	-0.011	-0.048	-0.078	0.204%
chr8_27559204_C_T	chr8:27559204	0.027	0.053	0.078	<0.001%
chr8_27559205_G_A	chr8:27559205	-0.009	0.019	0.078	0.0013%
chr8_27559294_C_G	chr8:27559294	-0.004	0.010	0.078	0.0059%
chr8_27559915_C_A	chr8:27559915	-0.006	-0.011	-0.078	<0.001%
chr8_27566249_G_C	chr8:27566249	0.019	0.021	0.078	—
chr8_27566260_C_T	chr8:27566260	0.015	-0.013	-0.078	—
chr8_27566269_A_C	chr8:27566269	0.003	-0.005	0.078	—
chr8_27566273_T_C	chr8:27566273	-0.005	-0.026	0.078	—
chr8_27566282_C_G	chr8:27566282	0.001	-0.014	-0.078	—
chr8_27566300_G_T	chr8:27566300	0.007	0.013	0.078	—
chr8_27566325_T_C	chr8:27566325	0.020	0.018	0.078	—
chr8_27566340_A_C	chr8:27566340	-0.015	-0.014	-0.078	—
chr8_27541829_C_G	chr8:27541829	-0.013	-0.010	0.075	<0.001%
chr8_27566250_G_T	chr8:27566250	0.046	0.077	-0.007	—
chr8_27541603_A_G	chr8:27541603	0.005	-0.002	0.072	0.0053%
chr8_27558137_T_C	chr8:27558137	-0.023	-0.013	0.072	<0.001%
chr8_27558247_C_G	chr8:27558247	-0.045	-0.075	-0.072	0.0013%
chr8_27558260_G_A	chr8:27558260	0.028	0.022	-0.072	<0.001%
chr8_27558291_G_C	chr8:27558291	0.011	0.008	0.072	0.083%
chr8_27558673_C_G	chr8:27558673	-0.010	-0.006	-0.072	<0.001%
chr8_27558702_C_T	chr8:27558702	-0.024	-0.006	-0.072	<0.001%
chr8_27558781_G_A	chr8:27558781	0.004	0.002	-0.072	0.0013%
chr8_27558964_G_A	chr8:27558964	0.010	-0.011	-0.072	0.0026%
chr8_27559035_A_G	chr8:27559035	0.016	0.029	0.072	<0.001%
chr8_27559229_G_A	chr8:27559229	-0.007	-0.010	-0.072	<0.001%
chr8_27559642_A_G	chr8:27559642	0.005	0.040	0.072	0.015%
chr8_27559665_A_C	chr8:27559665	-0.010	-0.013	-0.072	0.0013%
chr8_27559997_T_C	chr8:27559997	0.002	-0.014	0.072	0.0020%
chr8_27560002_G_C	chr8:27560002	0.005	-0.002	0.072	0.0013%
chr8_27566232_T_C	chr8:27566232	-0.006	-0.014	-0.072	—
chr8_27566243_A_G	chr8:27566243	0.000	0.018	0.072	—
chr8_27566244_T_A	chr8:27566244	-0.013	-0.018	-0.072	—
chr8_27566245_A_G	chr8:27566245	0.003	-0.003	0.072	—
chr8_27566270_G_A	chr8:27566270	0.002	0.000	-0.072	—

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.