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SCARF1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SCARF1
chr17:1,533,857..1,745,732, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_1546214_C_T | chr17:1546214 | 9,952 | -2,016 | 10,368 | — |
| chr17_1546231_G_A | chr17:1546231 | 5,568 | -3,424 | 1,152 | — |
| chr17_1534434_C_G | chr17:1534434 | 4,704 | 2,400 | 7,040 | — |
| chr17_1546262_T_G | chr17:1546262 | 4,128 | 992 | 2,944 | — |
| chr17_1534413_G_T | chr17:1534413 | 3,520 | 2,400 | 6,400 | — |
| chr17_1546294_G_C | chr17:1546294 | 3,520 | 1,632 | 2,560 | — |
| chr17_1546294_G_T | chr17:1546294 | 3,360 | 1,760 | 1,408 | — |
| chr17_1546250_G_T | chr17:1546250 | 3,264 | 864 | 3,072 | — |
| chr17_1546294_G_A | chr17:1546294 | 3,168 | 1,984 | 1,408 | — |
| chr17_1546292_A_T | chr17:1546292 | 3,104 | 2,016 | 1,792 | — |
| chr17_1546254_C_G | chr17:1546254 | 2,944 | 864 | 4,480 | — |
| chr17_1546198_G_A | chr17:1546198 | 2,912 | 608 | 1,280 | — |
| chr17_1546292_A_C | chr17:1546292 | 2,880 | 1,664 | 2,432 | — |
| chr17_1546268_A_G | chr17:1546268 | -2,816 | -1,216 | -1,664 | — |
| chr17_1546251_C_T | chr17:1546251 | 2,800 | 1,568 | 2,944 | 6.6e-6 |
| chr17_1546254_C_A | chr17:1546254 | 2,752 | 1,152 | 3,584 | — |
| chr17_1546200_A_C | chr17:1546200 | 2,752 | 288 | 3,200 | — |
| chr17_1546195_C_A | chr17:1546195 | 2,720 | 416 | 2,304 | — |
| chr17_1546307_C_A | chr17:1546307 | -2,688 | -1,376 | -3,328 | — |
| chr17_1546250_G_A | chr17:1546250 | 2,688 | 1,376 | 1,792 | — |
| chr17_1546300_G_A | chr17:1546300 | -2,624 | -1,408 | -1,664 | 6.6e-6 |
| chr17_1546251_C_G | chr17:1546251 | 2,544 | 1,280 | 2,944 | — |
| chr17_1546291_T_A | chr17:1546291 | 2,496 | 1,344 | 2,048 | — |
| chr17_1546251_C_A | chr17:1546251 | 2,480 | 1,344 | 2,944 | — |
| chr17_1546198_G_T | chr17:1546198 | 2,464 | 352 | 1,664 | — |
| chr17_1546300_G_T | chr17:1546300 | -2,464 | -1,184 | -640 | — |
| chr17_1546214_C_G | chr17:1546214 | 2,368 | 256 | 1,408 | — |
| chr17_1546250_G_C | chr17:1546250 | 2,272 | 960 | 2,048 | — |
| chr17_1546283_C_G | chr17:1546283 | -2,272 | -1,216 | -1,152 | — |
| chr17_1546248_G_T | chr17:1546248 | -2,208 | -160 | -1,536 | — |
| chr17_1546262_T_A | chr17:1546262 | 2,144 | 800 | 1,408 | — |
| chr17_1546253_T_A | chr17:1546253 | 2,064 | 832 | 2,688 | — |
| chr17_1534434_C_A | chr17:1534434 | 2,048 | 1,120 | 3,840 | — |
| chr17_1546267_G_C | chr17:1546267 | 2,048 | 928 | 1,024 | — |
| chr17_1546252_A_T | chr17:1546252 | 2,000 | 992 | 2,560 | — |
| chr17_1546290_T_A | chr17:1546290 | 1,984 | 928 | 1,152 | — |
| chr17_1546253_T_G | chr17:1546253 | 1,952 | 320 | 3,200 | — |
| chr17_1546200_A_T | chr17:1546200 | 1,952 | 192 | 1,920 | — |
| chr17_1546252_A_C | chr17:1546252 | 1,936 | 224 | 1,920 | — |
| chr17_1546198_G_C | chr17:1546198 | 1,920 | 0 | 2,304 | — |
| chr17_1546277_T_G | chr17:1546277 | 1,888 | 544 | 2,688 | — |
| chr17_1546246_C_A | chr17:1546246 | 1,824 | 1,216 | 1,792 | — |
| chr17_1546306_G_C | chr17:1546306 | -1,792 | -640 | -512 | — |
| chr17_1546310_T_C | chr17:1546310 | -1,760 | -672 | -256 | — |
| chr17_1546312_C_T | chr17:1546312 | 1,760 | 1,152 | 256 | — |
| chr17_1534434_C_T | chr17:1534434 | 1,696 | 960 | 3,584 | — |
| chr17_1546200_A_G | chr17:1546200 | 1,696 | 320 | 2,048 | 2.6e-5 |
| chr17_1546296_A_G | chr17:1546296 | 1,696 | 1,024 | 2,048 | 6.6e-6 |
| chr17_1546268_A_C | chr17:1546268 | -1,664 | -608 | -896 | — |
| chr17_1546194_G_C | chr17:1546194 | 1,632 | -64 | 1,152 | — |
| chr17_1546267_G_A | chr17:1546267 | 1,632 | 1,024 | -128 | 6.6e-6 |
| chr17_1546303_A_C | chr17:1546303 | -1,632 | -736 | -768 | — |
| chr17_1546303_A_T | chr17:1546303 | -1,632 | -832 | -1,408 | — |
| chr17_1546308_T_C | chr17:1546308 | -1,632 | -608 | -384 | — |
| chr17_1546247_T_C | chr17:1546247 | -1,616 | -704 | -768 | — |
| chr17_1546295_G_C | chr17:1546295 | 1,600 | 1,024 | 2,176 | — |
| chr17_1546243_C_T | chr17:1546243 | 1,568 | 1,376 | 768 | — |
| chr17_1546267_G_T | chr17:1546267 | 1,568 | 1,088 | 256 | — |
| chr17_1546302_G_A | chr17:1546302 | -1,568 | -544 | -1,152 | 2.6e-5 |
| chr17_1546247_T_G | chr17:1546247 | -1,552 | -608 | -640 | — |
| chr17_1546248_G_C | chr17:1546248 | -1,552 | -128 | -1,280 | — |
| chr17_1546249_T_C | chr17:1546249 | -1,536 | -1,056 | -1,280 | — |
| chr17_1546243_C_A | chr17:1546243 | 1,504 | 1,440 | 896 | — |
| chr17_1546312_C_A | chr17:1546312 | 1,504 | 1,248 | 1,408 | — |
| chr17_1546303_A_G | chr17:1546303 | -1,472 | -192 | -2,944 | — |
| chr17_1546204_C_G | chr17:1546204 | 1,472 | 128 | 1,664 | — |
| chr17_1546206_G_C | chr17:1546206 | 1,472 | -544 | 1,024 | — |
| chr17_1546276_T_A | chr17:1546276 | 1,472 | 320 | 640 | — |
| chr17_1546217_C_G | chr17:1546217 | 1,440 | 384 | 1,408 | 1.3e-5 |
| chr17_1546280_A_G | chr17:1546280 | -1,440 | -1,120 | 0 | 6.6e-6 |
| chr17_1546304_G_T | chr17:1546304 | -1,440 | -544 | -1,280 | — |
| chr17_1546314_T_A | chr17:1546314 | 1,440 | 576 | 768 | — |
| chr17_1546263_C_A | chr17:1546263 | 1,424 | 736 | 768 | — |
| chr17_1546277_T_A | chr17:1546277 | 1,408 | 352 | 1,664 | — |
| chr17_1546302_G_T | chr17:1546302 | -1,408 | -640 | -1,536 | — |
| chr17_1546218_C_A | chr17:1546218 | 1,408 | 576 | 0 | — |
| chr17_1546293_A_G | chr17:1546293 | 1,408 | 960 | 1,152 | — |
| chr17_1546316_A_C | chr17:1546316 | -1,408 | -224 | 640 | — |
| chr17_1546254_C_T | chr17:1546254 | 1,376 | 576 | 1,920 | — |
| chr17_1546230_T_C | chr17:1546230 | -1,376 | -544 | -512 | — |
| chr17_1546196_T_C | chr17:1546196 | 1,344 | 352 | 2,816 | — |
| chr17_1546252_A_G | chr17:1546252 | 1,344 | 224 | 2,688 | 1.3e-5 |
| chr17_1546253_T_C | chr17:1546253 | 1,344 | 576 | 1,024 | — |
| chr17_1546260_T_G | chr17:1546260 | 1,344 | 0 | 1,024 | — |
| chr17_1546304_G_C | chr17:1546304 | -1,344 | -608 | -512 | — |
| chr17_1546223_C_G | chr17:1546223 | -1,328 | -768 | -384 | — |
| chr17_1546240_G_T | chr17:1546240 | 1,328 | 1,120 | 128 | — |
| chr17_1546305_G_C | chr17:1546305 | -1,328 | -640 | -1,024 | — |
| chr17_1546191_A_C | chr17:1546191 | 1,312 | -64 | 3,328 | — |
| chr17_1546193_T_G | chr17:1546193 | 1,312 | 0 | 3,072 | — |
| chr17_1546191_A_T | chr17:1546191 | 1,312 | -32 | 2,048 | — |
| chr17_1546205_A_C | chr17:1546205 | 1,312 | -128 | 1,792 | — |
| chr17_1546278_C_A | chr17:1546278 | 1,312 | 480 | 1,408 | — |
| chr17_1546314_T_C | chr17:1546314 | 1,312 | 800 | 896 | — |
| chr17_1546196_T_G | chr17:1546196 | 1,184 | -320 | 3,968 | — |
| chr17_1546196_T_A | chr17:1546196 | 1,184 | 32 | 2,432 | — |
| chr17_1546278_C_G | chr17:1546278 | 1,184 | 256 | 1,920 | — |
| chr17_1546307_C_G | chr17:1546307 | -1,184 | -416 | -1,792 | — |
| chr17_1546245_T_A | chr17:1546245 | 1,168 | 960 | 1,536 | — |
| chr17_1546193_T_A | chr17:1546193 | 1,152 | 32 | 1,792 | — |
| chr17_1546293_A_C | chr17:1546293 | 1,136 | 992 | 1,920 | — |
| chr17_1546226_A_C | chr17:1546226 | -1,120 | -832 | -1,792 | — |
| chr17_1546225_G_C | chr17:1546225 | -1,072 | -1,632 | -512 | — |
| chr17_1546318_C_A | chr17:1546318 | -1,056 | -768 | -2,304 | — |
| chr17_1546246_C_G | chr17:1546246 | 1,024 | 1,152 | 1,920 | — |
| chr17_1546193_T_C | chr17:1546193 | 992 | 64 | 2,944 | — |
| chr17_1546199_G_C | chr17:1546199 | 992 | -32 | 1,536 | — |
| chr17_1534410_T_C | chr17:1534410 | 960 | 736 | 2,816 | — |
| chr17_1534410_T_A | chr17:1534410 | 960 | 928 | 2,560 | — |
| chr17_1534383_G_T | chr17:1534383 | -960 | -480 | -2,176 | — |
| chr17_1546201_T_C | chr17:1546201 | 944 | 0 | 1,664 | — |
| chr17_1534394_T_C | chr17:1534394 | 928 | 544 | 2,048 | — |
| chr17_1546292_A_G | chr17:1546292 | 928 | 384 | 1,408 | — |
| chr17_1546242_A_C | chr17:1546242 | 912 | 416 | 1,408 | — |
| chr17_1546308_T_G | chr17:1546308 | -896 | -416 | -1,664 | — |
| chr17_1546315_C_A | chr17:1546315 | -896 | -576 | -1,536 | — |
| chr17_1534433_C_T | chr17:1534433 | 864 | 608 | 2,560 | — |
| chr17_1546212_A_C | chr17:1546212 | 864 | -192 | 2,048 | — |
| chr17_1546192_G_C | chr17:1546192 | 864 | 64 | 1,536 | — |
| chr17_1546216_A_G | chr17:1546216 | 832 | -192 | 2,048 | — |
| chr17_1546290_T_G | chr17:1546290 | 832 | 544 | 1,920 | — |
| chr17_1534433_C_A | chr17:1534433 | 800 | 576 | 2,304 | — |
| chr17_1534432_C_T | chr17:1534432 | 800 | 480 | 2,176 | — |
| chr17_1546266_A_C | chr17:1546266 | 800 | 672 | 1,664 | — |
| chr17_1546246_C_T | chr17:1546246 | 800 | 1,600 | 768 | — |
| chr17_1546208_C_G | chr17:1546208 | -768 | -1,024 | -2,176 | — |
| chr17_1546238_A_C | chr17:1546238 | 768 | 352 | 1,536 | — |
| chr17_1546288_G_T | chr17:1546288 | -768 | -352 | -1,408 | — |
| chr17_1534432_C_G | chr17:1534432 | 736 | 896 | 2,944 | — |
| chr17_1534362_C_A | chr17:1534362 | -736 | -480 | -1,920 | — |
| chr17_1534496_A_T | chr17:1534496 | -736 | 128 | 1,536 | — |
| chr17_1546272_T_G | chr17:1546272 | 720 | 160 | 2,688 | — |
| chr17_1546202_T_C | chr17:1546202 | 704 | -416 | 1,664 | — |
| chr17_1546209_A_C | chr17:1546209 | 688 | -32 | 1,664 | — |
| chr17_1534362_C_T | chr17:1534362 | -672 | -416 | -1,536 | — |
| chr17_1546216_A_C | chr17:1546216 | -640 | -288 | -2,432 | — |
| chr17_1546219_G_T | chr17:1546219 | -608 | -384 | -2,304 | — |
| chr17_1534370_G_C | chr17:1534370 | -608 | -384 | -1,536 | — |
| chr17_1534438_A_C | chr17:1534438 | 576 | 224 | 1,408 | — |
| chr17_1534380_A_T | chr17:1534380 | -576 | -352 | -1,280 | — |
| chr17_1534383_G_A | chr17:1534383 | -576 | -416 | -1,280 | — |
| chr17_1546313_T_G | chr17:1546313 | 560 | 448 | 1,664 | — |
| chr17_1534366_A_G | chr17:1534366 | 544 | 384 | 2,176 | — |
| chr17_1534433_C_G | chr17:1534433 | 544 | 544 | 2,176 | — |
| chr17_1534379_C_A | chr17:1534379 | -544 | -352 | -1,792 | — |
| chr17_1534435_C_G | chr17:1534435 | 544 | 352 | 1,408 | — |
| chr17_1534411_A_C | chr17:1534411 | 512 | 544 | 2,176 | — |
| chr17_1534411_A_T | chr17:1534411 | 512 | 544 | 2,048 | — |
| chr17_1534366_A_C | chr17:1534366 | 480 | 352 | 2,304 | — |
| chr17_1546208_C_T | chr17:1546208 | -480 | -64 | -2,048 | — |
| chr17_1534435_C_A | chr17:1534435 | 480 | 352 | 1,792 | — |
| chr17_1534436_C_A | chr17:1534436 | 448 | 480 | 2,048 | — |
| chr17_1534430_A_G | chr17:1534430 | -448 | 0 | -1,792 | — |
| chr17_1534435_C_T | chr17:1534435 | 448 | 288 | 1,792 | — |
| chr17_1534345_A_C | chr17:1534345 | 448 | 384 | 1,664 | — |
| chr17_1546235_T_A | chr17:1546235 | -448 | -192 | 1,536 | — |
| chr17_1546255_C_G | chr17:1546255 | 448 | 64 | 1,536 | — |
| chr17_1546288_G_A | chr17:1546288 | -416 | -192 | -1,664 | — |
| chr17_1534440_A_C | chr17:1534440 | 416 | 128 | 1,536 | 1.3e-5 |
| chr17_1534473_G_C | chr17:1534473 | -384 | -96 | -1,664 | — |
| chr17_1534466_G_C | chr17:1534466 | -352 | -128 | -1,920 | — |
| chr17_1534410_T_G | chr17:1534410 | 352 | 416 | 1,664 | — |
| chr17_1534436_C_G | chr17:1534436 | 352 | 256 | 1,408 | — |
| chr17_1546213_G_T | chr17:1546213 | 336 | -96 | -1,408 | — |
| chr17_1546296_A_C | chr17:1546296 | -320 | -288 | 1,792 | — |
| chr17_1534385_C_T | chr17:1534385 | -320 | -160 | -1,408 | — |
| chr17_1534341_G_A | chr17:1534341 | -320 | -256 | -1,280 | 1.3e-5 |
| chr17_1534347_T_C | chr17:1534347 | 320 | 288 | 1,280 | — |
| chr17_1534466_G_T | chr17:1534466 | -288 | -160 | -2,048 | — |
| chr17_1534396_A_C | chr17:1534396 | 288 | 192 | 1,664 | — |
| chr17_1534386_C_T | chr17:1534386 | -288 | -224 | -1,536 | — |
| chr17_1546245_T_G | chr17:1546245 | 288 | 128 | 1,536 | — |
| chr17_1534377_G_T | chr17:1534377 | -288 | -256 | -1,408 | — |
| chr17_1534386_C_G | chr17:1534386 | -288 | -224 | -1,408 | — |
| chr17_1534444_A_C | chr17:1534444 | 288 | 160 | 1,280 | — |
| chr17_1534448_A_C | chr17:1534448 | 256 | 96 | 1,536 | — |
| chr17_1534465_G_T | chr17:1534465 | -256 | 0 | -1,536 | — |
| chr17_1534386_C_A | chr17:1534386 | -256 | -160 | -1,408 | — |
| chr17_1534466_G_A | chr17:1534466 | -224 | -96 | -2,304 | — |
| chr17_1534465_G_C | chr17:1534465 | -224 | -32 | -1,792 | — |
| chr17_1534470_T_C | chr17:1534470 | -224 | -96 | -1,792 | — |
| chr17_1534334_G_T | chr17:1534334 | -192 | -224 | -1,664 | 6.6e-6 |
| chr17_1546220_T_C | chr17:1546220 | 192 | -896 | 1,408 | — |
| chr17_1534442_A_C | chr17:1534442 | 192 | 64 | 1,280 | — |
| chr17_1546197_A_C | chr17:1546197 | 160 | -640 | 2,560 | — |
| chr17_1546280_A_T | chr17:1546280 | -160 | -544 | 1,664 | — |
| chr17_1534343_G_A | chr17:1534343 | -160 | -160 | -1,536 | — |
| chr17_1534328_C_G | chr17:1534328 | -160 | -128 | -1,408 | — |
| chr17_1546213_G_C | chr17:1546213 | -144 | -288 | -1,536 | — |
| chr17_1534442_A_G | chr17:1534442 | 128 | 192 | 1,536 | — |
| chr17_1534513_G_A | chr17:1534513 | 128 | -32 | -1,536 | — |
| chr17_1534377_G_A | chr17:1534377 | -128 | -416 | -1,280 | 6.6e-6 |
| chr17_1534454_A_G | chr17:1534454 | 96 | -32 | 1,408 | — |
| chr17_1534339_A_C | chr17:1534339 | 96 | 192 | 1,280 | — |
| chr17_1534504_A_C | chr17:1534504 | -64 | 0 | 1,664 | — |
| chr17_1546221_G_A | chr17:1546221 | 64 | -128 | -1,536 | — |
| chr17_1534467_C_A | chr17:1534467 | -64 | -32 | -1,408 | — |
| chr17_1534505_A_G | chr17:1534505 | 64 | 0 | 1,408 | — |
| chr17_1546234_T_G | chr17:1546234 | -64 | 32 | 1,408 | — |
| chr17_1534340_G_A | chr17:1534340 | 0 | -192 | -1,408 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.